HHSEARCH alignment of GI: 254780480 and SCOP domain: d1pkha_

Alignment
>d1pkha_ b.85.4.1 (A:) Bifunctional dCTP deaminase/dUTPase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00  E-value=1.5e-39  Score=275.07  Aligned_cols=156  Identities=22%  Similarity=0.233  Sum_probs=135.7

Q ss_pred             CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEE--------------
Q ss_conf             615868999999879849817898656571225887589899981231578886211000240478--------------
Q gi|254780480|r    4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLR--------------   69 (367)
Q Consensus         4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~--------------   69 (367)
                      |||||++|++++++|.|.++ ||+++||||||+|||||+.++++..+.++..+....+++......              
T Consensus         1 MiLsd~~I~~~~~~g~i~i~-Pf~~~qiqp~s~DLrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (182)
T d1pkha_           1 MILSDKDIIDYVTSKRIIIK-PFNKDFVGPCSYDVTLGDEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNLTEEKI   79 (182)
T ss_dssp             CBCCHHHHHHHHHTTSSEEE-SCCGGGBCSSCEEEEBCSEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCCCHHHH
T ss_pred             CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCE
T ss_conf             91688999999974994684-89878838661243742389999442367445665311135543042454344454431


Q ss_pred             -EEECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCE
Q ss_conf             -8736886486687329999888998499827998601343112503423207877554236674438999951686527
Q gi|254780480|r   70 -EIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPI  148 (367)
Q Consensus        70 -eidl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI  148 (367)
                       .+..+++++|.|+.+||++|+|+|++|+|++|.++||||++|+|++++.+++      +|||||+|++||||+|.++||
T Consensus        80 ~~~~~~~~~~l~p~~~~L~~t~E~v~lp~~~~~~~~~kSS~aR~G~~~~~ta~------~iDpGy~G~ltlei~n~~~pi  153 (182)
T d1pkha_          80 NYFKEKYNVDYVVEGGVLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAG------WIDAGFKGKITLEIVAFDKPV  153 (182)
T ss_dssp             HHHHHHHCCSEEEESCEEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCC------EECTTCEEEEEEEEEESSSCE
T ss_pred             EEEECCCCEEECCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCE------EECCCCCCEEEEEEEECCCCE
T ss_conf             68734786077179879999976999547215899734402443100212332------889998766999999789898


Q ss_pred             EEECCCEEEEEEEEECCC
Q ss_conf             983398035689850887
Q gi|254780480|r  149 VVRVGSRLSQIRFVKERK  166 (367)
Q Consensus       149 ~v~~G~rl~Qi~f~~g~~  166 (367)
                      +||+|||||||+|++.+.
T Consensus       154 ~I~~g~ri~Ql~F~~~~~  171 (182)
T d1pkha_         154 ILYKNQRIGQLIFSKLLS  171 (182)
T ss_dssp             EEETTCEEEEEEEEECSS
T ss_pred             EECCCCEEEEEEEEECCC
T ss_conf             980899899999998777


SCOP domain information

class: All beta proteins
fold: beta-clip
superfamily: dUTPase-like
family: dUTPase-like
domain: Bifunctional dCTP deaminase/dUTPase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]