HHsearch alignment of GI: 254780482 and MMDB domain: 1a6f_A_
>1a6f_A (A:) RNAse P protein, ribonuclease P protein; endonuclease, subunit; 2.60A {Bacillus subtilis}
Probab=99.97 E-value=6.4e-30 Score=185.39 Aligned_cols=113 Identities=29% Similarity=0.365 Sum_probs=102.8
Q ss_pred CCCEEECCCHHHHHHHHH-CCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 986132489899999970-9851368579999966876677379999607877512436689999999999754213488
Q gi|254780482|r 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79 (123)
Q Consensus 1 m~~~~rLk~~~dF~~v~k-g~~~~~~~~~i~~~~~~~~~~~~R~G~~vsKKvg~AV~RNriKR~lRe~~R~~~~~~~~~~ 79 (123)
|++.+||+++.||+.|++ |+++.+++++++++++++. +++|+||+||||+|+||+||++||++||++|++.+.+ +|
T Consensus 4 ~~k~~rLk~~~eF~~v~~~g~~~~~~~~~l~~~~~~~~-~~~R~gi~vsKKvg~AV~RNriKR~lRe~~R~~~~~l--~~ 80 (119)
T 1a6f_A 4 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPEN-DELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERL--KE 80 (119)
T ss_dssp CCGGGBCCSHHHHHHHHHHSEEEECSSEEEEECCCTTC-SSCEEEEEECSTTCCHHHHHHHHHHHHHHHHHHTTTB--CS
T ss_pred CCHHHHCCCHHHHHHHHHCCCEEECCCEEEEEECCCCC-CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC--CC
T ss_conf 85110179989999999859687489789999738989-9826999993102556888999999999999864128--99
Q ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3399985720037998999999999999986441043
Q gi|254780482|r 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116 (123)
Q Consensus 80 ~d~Viiar~~~~~~~~~~l~~~l~~~l~k~~~~~~~~ 116 (123)
+||||++++++.+++|+++.++|..+|.++.....+.
T Consensus 81 ~d~v~i~r~~~~~~~~~~l~~~l~~ll~k~~~~~~~~ 117 (119)
T 1a6f_A 81 KDYIIIARKPASQLTYEETKKSLQHLFRKSSLYKKSS 117 (119)
T ss_dssp SEEEEEECGGGTTCCHHHHHHHHHHHHHHTTCBC---
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7499996687676999999999999999824231157