BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780482|ref|YP_003064895.1| ribonuclease P [Candidatus
Liberibacter asiaticus str. psy62]
(123 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780482|ref|YP_003064895.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
gi|254040159|gb|ACT56955.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
Length = 123
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM
Sbjct: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS
Sbjct: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
Query: 121 RKS 123
RKS
Sbjct: 121 RKS 123
>gi|315122062|ref|YP_004062551.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495464|gb|ADR52063.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 142
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 105/123 (85%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNI ILKK RQFALVKKGE RKGP+FSLEVLNNNN L R+GFTVTK+QGCAV RNR+
Sbjct: 20 MSNISILKKCRQFALVKKGESRKGPYFSLEVLNNNNPKGLSRIGFTVTKRQGCAVVRNRI 79
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKE VRLC++ +LK GHDYV++AKRD L +PFKELC HFVERVR NKR Y SGK FS
Sbjct: 80 RRRLKEVVRLCSKDILKPGHDYVIVAKRDTLLVPFKELCTHFVERVRYNKRLYRSGKIFS 139
Query: 121 RKS 123
R++
Sbjct: 140 RET 142
>gi|307301343|ref|ZP_07581105.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
gi|307318013|ref|ZP_07597450.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306896415|gb|EFN27164.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306903799|gb|EFN34386.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
Length = 132
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRRLKE
Sbjct: 17 LKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRRLKE 76
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
AVRL A +K GHDYV++A+RD L PF L +R+ NK SRKS
Sbjct: 77 AVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRI-ENKPKQKRPPAGSRKS 132
>gi|15964198|ref|NP_384551.1| ribonuclease P [Sinorhizobium meliloti 1021]
gi|21263951|sp|Q92SF4|RNPA_RHIME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15073374|emb|CAC41882.1| Probable ribonuclease P protein component (protein C5)
[Sinorhizobium meliloti 1021]
Length = 128
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRRLKE
Sbjct: 13 LKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRRLKE 72
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
AVRL A +K GHDYV++A+RD L PF L +R+ NK SRKS
Sbjct: 73 AVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRI-ENKPKQKRPPAGSRKS 128
>gi|227820670|ref|YP_002824640.1| ribonuclease P [Sinorhizobium fredii NGR234]
gi|227339669|gb|ACP23887.1| ribonuclease P protein component [Sinorhizobium fredii NGR234]
Length = 128
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 70/105 (66%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S + LK R QF V+ GE RKGP F LEVL+ + RVGFTVTKK G AVERNRMR
Sbjct: 8 STVGRLKSRPQFLAVRAGEARKGPHFLLEVLDRKDPEGEARVGFTVTKKHGNAVERNRMR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRLKEAVRL A +K GHDYV++A+RD L PF L +R+
Sbjct: 68 RRLKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRGLQDRI 112
>gi|150395308|ref|YP_001325775.1| ribonuclease P [Sinorhizobium medicae WSM419]
gi|150026823|gb|ABR58940.1| ribonuclease P protein component [Sinorhizobium medicae WSM419]
Length = 132
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 69/100 (69%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRRLKE
Sbjct: 17 LKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRRLKE 76
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AVRL A +K GHDYV++A+RD L PF L +R+
Sbjct: 77 AVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRI 116
>gi|159184284|ref|NP_353416.2| ribonuclease P [Agrobacterium tumefaciens str. C58]
gi|22001934|sp|Q8UIB2|RNPA_AGRT5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159139610|gb|AAK86201.2| ribonuclease P protein component [Agrobacterium tumefaciens str.
C58]
Length = 127
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 76/116 (65%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R +F V+ GE R+G F +EVL+ PRVGFTVTK+QG AVERNRMRRRLKE
Sbjct: 11 LKNRSEFLAVQAGEKRRGSTFLVEVLDRRAPETEPRVGFTVTKRQGNAVERNRMRRRLKE 70
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
AVRL A +K GHDYV++A+RD L F +L + +ER+ + S + SRK
Sbjct: 71 AVRLSAGVAMKPGHDYVIVARRDVLDTAFPKLQSLLIERIEGTAKPKRSQETRSRK 126
>gi|325291818|ref|YP_004277682.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
gi|325059671|gb|ADY63362.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
Length = 139
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 73/116 (62%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R F V+ GE R+G F LEVL+ PRVGFTVTK+QG AVERNRMRRRLKE
Sbjct: 23 LKNRSDFLAVQTGEKRRGGTFLLEVLDRKTPETEPRVGFTVTKRQGNAVERNRMRRRLKE 82
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
AVRL A +K GHDYV++A+RD L F +L + ER+ + S SRK
Sbjct: 83 AVRLSAGFAMKPGHDYVIVARRDVLETAFPKLQSLLTERIEGTAKPKRSQDTRSRK 138
>gi|222084729|ref|YP_002543258.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
gi|221722177|gb|ACM25333.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
Length = 137
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE RKG F +E L+ ++ PRVGFTVTKK G AVERNRMRR
Sbjct: 17 TVGRLKSRPQFLAVRQGEKRKGSLFLIEALDRKLTDAEPRVGFTVTKKHGNAVERNRMRR 76
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
RLKEAVRL A ++ GHDYV++A+R+ L F++L N V+R+ + + SRK
Sbjct: 77 RLKEAVRLHAGFAMQPGHDYVVVARREVLTASFEKLANELVQRIETRPKHRRPETDRSRK 136
>gi|116250223|ref|YP_766061.1| ribonuclease P [Rhizobium leguminosarum bv. viciae 3841]
gi|166226735|sp|Q1MM57|RNPA_RHIL3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115254871|emb|CAK05945.1| putative ribonuclease protein component [Rhizobium leguminosarum
bv. viciae 3841]
Length = 129
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 74/119 (62%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G FF LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 9 TVGRLKSRPQFLAVREGEKRRGGFFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 68
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 69 RLKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 127
>gi|222147366|ref|YP_002548323.1| ribonuclease P [Agrobacterium vitis S4]
gi|221734356|gb|ACM35319.1| ribonuclease P protein component [Agrobacterium vitis S4]
Length = 129
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 68/100 (68%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V+ GE RKG + LEVL+ + PRVGFTVTKK G AVERNRMRRRLKE
Sbjct: 13 LKSRPQFLAVRVGEKRKGRYILLEVLDRAEPDTPPRVGFTVTKKHGNAVERNRMRRRLKE 72
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AVR A ++ GHDYV++A+RD L PF EL + R+
Sbjct: 73 AVRTGAGFAMQPGHDYVIVARRDVLSAPFGELRDVLQRRI 112
>gi|209547693|ref|YP_002279610.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209533449|gb|ACI53384.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 133
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 73/119 (61%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L FKEL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDYVVVARRDVLEASFKELAAELKFRVETRPKPRRSGDGRPR 131
>gi|86356095|ref|YP_467987.1| ribonuclease P [Rhizobium etli CFN 42]
gi|86280197|gb|ABC89260.1| ribonuclease P protein [Rhizobium etli CFN 42]
Length = 133
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L+ R QF V++GE R+G F LE+L+ + + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLRSRPQFLAVREGEKRRGGLFLLEILDRKDPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RLKEAVRL A +K GHDYV++A+RD L F+EL RV
Sbjct: 73 RLKEAVRLHAGFAMKPGHDYVVVARRDVLDASFQELAAELKSRV 116
>gi|241202850|ref|YP_002973946.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240856740|gb|ACS54407.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 133
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 72/119 (60%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF ++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAAREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 131
>gi|190890109|ref|YP_001976651.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|190695388|gb|ACE89473.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|327192534|gb|EGE59486.1| ribonuclease P protein [Rhizobium etli CNPAF512]
Length = 133
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 72/115 (62%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRRLKE
Sbjct: 17 LKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRRLKE 76
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
AVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 77 AVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|218660817|ref|ZP_03516747.1| ribonuclease P [Rhizobium etli IE4771]
Length = 107
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F +EVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAVREGEKRRGALFLMEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
RLKEAVRL A ++ GHDYV++A+RD L F+E
Sbjct: 73 RLKEAVRLHAGFAMRPGHDYVVVARRDVLDASFQE 107
>gi|218675210|ref|ZP_03524879.1| ribonuclease P [Rhizobium etli GR56]
Length = 133
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 72/119 (60%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKNRPQFLAVREGEKRRGGLFLLEVLDRREPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHD V++A+RD L F+EL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDDVVVARRDVLKASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|163868924|ref|YP_001610151.1| ribonuclease P [Bartonella tribocorum CIP 105476]
gi|161018598|emb|CAK02156.1| ribonuclease P protein component [Bartonella tribocorum CIP 105476]
Length = 130
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LEV + S+L+ RVGFTVT+K G AV+RNR
Sbjct: 7 CRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAEKKSSLVARVGFTVTRKNGNAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++
Sbjct: 67 IKRRLREAVRVGITNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIK 114
>gi|49475953|ref|YP_033994.1| ribonuclease P [Bartonella henselae str. Houston-1]
gi|60390412|sp|Q6G2G7|RNPA_BARHE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49238761|emb|CAF28022.1| Ribonuclease p protein component [Bartonella henselae str.
Houston-1]
Length = 133
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LEV + S+L+ RVGFTVT++ G AV+RNR
Sbjct: 10 CRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAERESSLVARVGFTVTRRNGNAVKRNR 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ ++ G DYV++A DAL PF L N R++
Sbjct: 70 IKRRLREAVRVGLTDDMEAGTDYVIVAHPDALHAPFTSLVNELSRRIK 117
>gi|240850504|ref|YP_002971903.1| ribonuclease P [Bartonella grahamii as4aup]
gi|240267627|gb|ACS51215.1| ribonuclease P [Bartonella grahamii as4aup]
Length = 130
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LEV + + +L+ RVGFTVT+K G AV+RNR
Sbjct: 7 CRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTTERKDSLVARVGFTVTRKNGNAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++
Sbjct: 67 IKRRLREAVRVGVTNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIK 114
>gi|218512685|ref|ZP_03509525.1| ribonuclease P [Rhizobium etli 8C-3]
Length = 96
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 58/80 (72%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRRLKE
Sbjct: 17 LKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRRLKE 76
Query: 67 AVRLCAEGVLKHGHDYVLIA 86
AVRL A ++ GHDYV++A
Sbjct: 77 AVRLHAGFAMQPGHDYVVVA 96
>gi|121602433|ref|YP_989322.1| ribonuclease P [Bartonella bacilliformis KC583]
gi|120614610|gb|ABM45211.1| ribonuclease P protein component [Bartonella bacilliformis KC583]
Length = 121
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLN-----NNNSNLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+KGE R+GP F LE+ + +S L R+GFTVT+K G AV+RNR
Sbjct: 7 CRIRKRADFLAVRKGEKRRGPLFLLEMRSRQKTAGTSSPLAARIGFTVTRKNGNAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ K G DYV++A D L+ PF L + R++
Sbjct: 67 IKRRLREAVRVGLTNDTKAGVDYVIVAYPDVLYAPFTSLISELSRRMK 114
>gi|49474530|ref|YP_032572.1| ribonuclease P [Bartonella quintana str. Toulouse]
gi|60390410|sp|Q6FZ17|RNPA_BARQU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49240034|emb|CAF26453.1| Ribonuclease p protein component [Bartonella quintana str.
Toulouse]
Length = 133
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LEV + S L+ RVGFTVT+K G AV+RNR
Sbjct: 10 CRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAGIKSPLVARVGFTVTRKNGNAVKRNR 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ ++ G DYV++A DAL PF L + R++
Sbjct: 70 IKRRLREAVRVGLTDDIEAGTDYVIVAHSDALHAPFTFLISELSRRIK 117
>gi|319408959|emb|CBI82616.1| ribonuclease P protein component [Bartonella schoenbuchensis R1]
Length = 123
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LE+ + L+ RVGFTVT+K G AV+RNR
Sbjct: 7 CRIRKRADFLAVRTGEKRRGPLFLLEIKPREQTAEIKHPLVARVGFTVTRKNGNAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ + ++ G DYV++A DAL PF L N R++
Sbjct: 67 IKRRLREAVRVGLKDNIEAGTDYVIVAHPDALHAPFSSLINELNRRIK 114
>gi|163757864|ref|ZP_02164953.1| ribonuclease P [Hoeflea phototrophica DFL-43]
gi|162285366|gb|EDQ35648.1| ribonuclease P [Hoeflea phototrophica DFL-43]
Length = 142
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R F V+KG +GPFF LE L+ ++ PR+G+TVTKKQG AVERNRMRRRL+E
Sbjct: 14 LKNRPDFLAVQKGTRLRGPFFLLETLDRGLADKAPRIGYTVTKKQGNAVERNRMRRRLRE 73
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AVR A + GHDYV++A+RD L PF L ERV+
Sbjct: 74 AVRHLAGVPFRPGHDYVVVARRDTLKAPFDRLVQALSERVQ 114
>gi|319898442|ref|YP_004158535.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
gi|319402406|emb|CBI75947.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
Length = 124
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVERNR 59
C ++KR F V+ GE R+GP F LE+ L+ RVGFTVT+K G AV+RNR
Sbjct: 7 CRIRKRVDFLAVRTGEKRRGPLFLLEIKPREKTAETKYPLVARVGFTVTRKHGNAVQRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+EAVR+ ++ G DYV++A RD L PF L + R++
Sbjct: 67 IKRRLREAVRVGLVNEMEAGTDYVIVAHRDVLHAPFTFLISELSRRIK 114
>gi|261216464|ref|ZP_05930745.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
gi|260918071|gb|EEX84932.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
Length = 145
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|23500745|ref|NP_700185.1| ribonuclease P [Brucella suis 1330]
gi|23464399|gb|AAN34190.1| ribonuclease P, protein component [Brucella suis 1330]
Length = 145
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|254696032|ref|ZP_05157860.1| ribonuclease P [Brucella abortus bv. 3 str. Tulya]
Length = 141
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 7 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 67 RNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|161621070|ref|YP_001594956.1| ribonuclease P [Brucella canis ATCC 23365]
gi|163845136|ref|YP_001622791.1| ribonuclease P [Brucella suis ATCC 23445]
gi|225686777|ref|YP_002734749.1| ribonuclease P [Brucella melitensis ATCC 23457]
gi|254690663|ref|ZP_05153917.1| ribonuclease P [Brucella abortus bv. 6 str. 870]
gi|254699141|ref|ZP_05160969.1| ribonuclease P [Brucella abortus bv. 2 str. 86/8/59]
gi|254700217|ref|ZP_05162045.1| ribonuclease P [Brucella suis bv. 5 str. 513]
gi|254703338|ref|ZP_05165166.1| ribonuclease P [Brucella suis bv. 3 str. 686]
gi|254720150|ref|ZP_05181961.1| ribonuclease P [Brucella sp. 83/13]
gi|254732585|ref|ZP_05191163.1| ribonuclease P [Brucella abortus bv. 4 str. 292]
gi|256058818|ref|ZP_05449034.1| ribonuclease P [Brucella neotomae 5K33]
gi|256111045|ref|ZP_05452107.1| ribonuclease P [Brucella melitensis bv. 3 str. Ether]
gi|256255845|ref|ZP_05461381.1| ribonuclease P [Brucella abortus bv. 9 str. C68]
gi|260567732|ref|ZP_05838201.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306839544|ref|ZP_07472351.1| ribonuclease P protein component [Brucella sp. NF 2653]
gi|189043728|sp|A9MCU8|RNPA_BRUC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043729|sp|A9WW33|RNPA_BRUSI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808055|sp|C0RMG2|RNPA_BRUMB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161337881|gb|ABX64185.1| ribonuclease P protein component [Brucella canis ATCC 23365]
gi|163675859|gb|ABY39969.1| ribonuclease P protein component [Brucella suis ATCC 23445]
gi|225642882|gb|ACO02795.1| ribonuclease P protein component [Brucella melitensis ATCC 23457]
gi|260154397|gb|EEW89478.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306405376|gb|EFM61648.1| ribonuclease P protein component [Brucella sp. NF 2653]
Length = 141
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 7 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 67 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|29427802|sp|Q8FV30|RNPA_BRUSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 141
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAV 55
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 6 QILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 66 IRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|62317851|ref|YP_223704.1| ribonuclease P [Brucella abortus bv. 1 str. 9-941]
gi|83269830|ref|YP_419121.1| ribonuclease P [Brucella melitensis biovar Abortus 2308]
gi|256015781|ref|YP_003105790.1| ribonuclease P [Brucella microti CCM 4915]
gi|260545086|ref|ZP_05820907.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260756234|ref|ZP_05868582.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260760397|ref|ZP_05872745.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260763637|ref|ZP_05875969.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260882058|ref|ZP_05893672.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261322755|ref|ZP_05961952.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261753968|ref|ZP_05997677.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|265985156|ref|ZP_06097891.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|265992580|ref|ZP_06105137.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|265998999|ref|ZP_05464621.2| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|297249213|ref|ZP_06932914.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
gi|62198044|gb|AAX76343.1| RnpA, ribonuclease P, protein component [Brucella abortus bv. 1
str. 9-941]
gi|82940104|emb|CAJ13151.1| Bacterial ribonuclease P protein [Brucella melitensis biovar
Abortus 2308]
gi|255998441|gb|ACU50128.1| ribonuclease P [Brucella microti CCM 4915]
gi|260098357|gb|EEW82231.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260670715|gb|EEX57655.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260674058|gb|EEX60879.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260676342|gb|EEX63163.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260871586|gb|EEX78655.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261298735|gb|EEY02232.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261743721|gb|EEY31647.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|262763450|gb|EEZ09482.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|263091778|gb|EEZ16109.1| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|264663748|gb|EEZ34009.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|297173082|gb|EFH32446.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
Length = 145
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|254710752|ref|ZP_05172563.1| ribonuclease P [Brucella pinnipedialis B2/94]
gi|254712778|ref|ZP_05174589.1| ribonuclease P [Brucella ceti M644/93/1]
gi|254715847|ref|ZP_05177658.1| ribonuclease P [Brucella ceti M13/05/1]
gi|256029135|ref|ZP_05442749.1| ribonuclease P [Brucella pinnipedialis M292/94/1]
gi|256157327|ref|ZP_05455245.1| ribonuclease P [Brucella ceti M490/95/1]
gi|256253695|ref|ZP_05459231.1| ribonuclease P [Brucella ceti B1/94]
gi|260167773|ref|ZP_05754584.1| ribonuclease P [Brucella sp. F5/99]
Length = 141
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAV 55
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 6 QILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 66 IRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|261217608|ref|ZP_05931889.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261220832|ref|ZP_05935113.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|261318320|ref|ZP_05957517.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261320485|ref|ZP_05959682.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261757210|ref|ZP_06000919.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|265986118|ref|ZP_06098675.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
gi|265995812|ref|ZP_06108369.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|260919416|gb|EEX86069.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|260922697|gb|EEX89265.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261293175|gb|EEX96671.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261297543|gb|EEY01040.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261737194|gb|EEY25190.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|262550109|gb|EEZ06270.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|264658315|gb|EEZ28576.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
Length = 145
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|254705521|ref|ZP_05167349.1| ribonuclease P [Brucella pinnipedialis M163/99/10]
Length = 141
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAV 55
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 6 QILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 66 IRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|261312925|ref|ZP_05952122.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
gi|261301951|gb|EEY05448.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
Length = 121
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|237817391|ref|ZP_04596383.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
gi|237788204|gb|EEP62420.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
Length = 184
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 50 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 109
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 110 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 159
>gi|225629471|ref|ZP_03787504.1| ribonuclease P protein component [Brucella ceti str. Cudo]
gi|225615967|gb|EEH13016.1| ribonuclease P protein component [Brucella ceti str. Cudo]
Length = 184
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 50 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 109
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 110 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 159
>gi|148558200|ref|YP_001257933.1| ribonuclease P [Brucella ovis ATCC 25840]
gi|148369485|gb|ABQ62357.1| ribonuclease P protein component [Brucella ovis ATCC 25840]
Length = 145
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F +EV N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFLQLTEELSRRI 120
>gi|260565067|ref|ZP_05835552.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|265990313|ref|ZP_06102870.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
gi|260152710|gb|EEW87803.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|263000982|gb|EEZ13672.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
Length = 145
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFF-------SLEVLNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F + E N + PRVGFTVTKK G AV
Sbjct: 11 ILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 71 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|17988620|ref|NP_541253.1| ribonuclease P [Brucella melitensis bv. 1 str. 16M]
gi|256043890|ref|ZP_05446810.1| ribonuclease P [Brucella melitensis bv. 1 str. Rev.1]
gi|21542218|sp|Q8YDA2|RNPA_BRUME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|17984423|gb|AAL53517.1| ribonuclease p protein component [Brucella melitensis bv. 1 str.
16M]
Length = 141
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVE 56
I L+KR +F V+ GE R+GP F + V N + PRVGFTVTKK G AV
Sbjct: 7 ILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVI 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 67 RNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 116
>gi|319406775|emb|CBI80408.1| ribonuclease P protein component [Bartonella sp. 1-1C]
Length = 105
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 17 KKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLC 71
+ GE R+GP F LE+ + L RVGFTVT+K G AV+RNR++RRL+EAVR+
Sbjct: 4 RTGEKRRGPLFLLEIKPREQTAKTKAPLTARVGFTVTRKNGNAVQRNRIKRRLREAVRVG 63
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++ G DYV+I R+ L +PF L + R+RR
Sbjct: 64 LVNEMEAGTDYVIIGHRNVLHVPFTSLISELSRRIRR 100
>gi|319405207|emb|CBI78812.1| ribonuclease P protein component (fragment) [Bartonella sp. AR
15-3]
Length = 109
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 16 VKKGELRKGPFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
V GE R+GP F LE+ + L RVGFTVT+K G AV+RNR++RRL+EAVR+
Sbjct: 3 VHTGEKRRGPLFLLEIKRREQTAKTKYPLTARVGFTVTRKNGNAVQRNRIKRRLREAVRV 62
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR-RNKRSYYSG 116
++ G DYV+IA R+ L PF L + R++ + K++ G
Sbjct: 63 GLTNEMEAGTDYVIIAHRNILHAPFTLLISELSRRIKSKTKKTTVVG 109
>gi|319403769|emb|CBI77353.1| ribonuclease P protein component [Bartonella rochalimae ATCC
BAA-1498]
Length = 105
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 16 VKKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+ GE R+GP F LE+ L RVGF VT+K G AV+RNR++RRL+EAVR+
Sbjct: 3 ARTGEKRRGPLFLLEIKPREQTAKTKGPLTARVGFAVTRKNGNAVQRNRIKRRLREAVRV 62
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++ G DYV+I R+ L PF L N R++R
Sbjct: 63 GLVNEMEAGTDYVIIGHRNVLHAPFTSLINELSRRIKR 100
>gi|189023101|ref|YP_001932842.1| ribonuclease P [Brucella abortus S19]
gi|189021675|gb|ACD74396.1| Bacterial ribonuclease P protein [Brucella abortus S19]
Length = 125
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 16 VKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
V+ GE R+GP F +EV N + PRVGFTVTKK G AV RNR+RRRLKEA+
Sbjct: 3 VRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAI 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R A + DYV++A+ AL PF +L R+
Sbjct: 63 RCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 100
>gi|260461162|ref|ZP_05809411.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
gi|259033196|gb|EEW34458.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
Length = 117
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR +F V++GE R+G FF +EVL+ + + PRVGFTVTKK G AV RNR+RRRLKE
Sbjct: 15 LLKRAEFLAVRRGEKRRGRFFLVEVLDRGDGGV-PRVGFTVTKKVGNAVVRNRVRRRLKE 73
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AVR+ A + G+DYV++ + DAL PF +L R+R
Sbjct: 74 AVRVHAADDMMPGNDYVIVGRDDALRAPFGQLKAELSRRLR 114
>gi|261750712|ref|ZP_05994421.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|261740465|gb|EEY28391.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|326411185|gb|ADZ68249.1| ribonuclease P [Brucella melitensis M28]
gi|326554476|gb|ADZ89115.1| ribonuclease P [Brucella melitensis M5-90]
Length = 123
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 16 VKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
++ GE R+GP F +EV N + PRVGFTVTKK G AV RNR+RRRLKEA+
Sbjct: 1 MRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAI 60
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R A + DYV++A+ AL PF +L R+
Sbjct: 61 RCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 98
>gi|294853975|ref|ZP_06794647.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
gi|294819630|gb|EFG36630.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
Length = 123
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 16 VKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
++ GE R+GP F +EV N + PRVGFTVTKK G AV RNR+RRRLKEA+
Sbjct: 1 MRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAI 60
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R A + DYV++A+ AL PF +L R+
Sbjct: 61 RCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 98
>gi|13474028|ref|NP_105596.1| ribonuclease P [Mesorhizobium loti MAFF303099]
gi|22654079|sp|Q98D89|RNPA_RHILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14024780|dbj|BAB51382.1| ribonuclease P, protein component [Mesorhizobium loti MAFF303099]
Length = 110
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR +F V++GE R+G FF +EVL+ + + PRVG+TVTKK G AV RNR+RRRLKE
Sbjct: 8 LLKRAEFLAVRRGEKRRGRFFLVEVLDRGDGGV-PRVGYTVTKKVGNAVVRNRVRRRLKE 66
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AVR+ A + G+DYV++ + DAL PF +L R R
Sbjct: 67 AVRVHAADDMVPGNDYVIVGRDDALRAPFGQLKAELSRRFR 107
>gi|90419892|ref|ZP_01227801.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
gi|90335933|gb|EAS49681.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
Length = 139
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ KR +F ++G GP F +E L+ ++ PRVG TVTKK G AV RNR+RRRL+E
Sbjct: 16 MTKRAEFLAARRGRRLNGPSFFIEALDRGDA-APPRVGLTVTKKVGNAVVRNRIRRRLRE 74
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
A+RL + + G DYV++A+RD L +PF++L + RV R K+
Sbjct: 75 AIRLDTQADMAPGIDYVVVARRDVLTLPFEQLKDELSRRVARMKQP 120
>gi|319780383|ref|YP_004139859.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166271|gb|ADV09809.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 117
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR +F V++GE R+G F +EVL+ + L PRVG+TVTKK G AV RNR+RRRL+E
Sbjct: 15 LLKRAEFLAVRRGEKRRGRLFLVEVLDRGD-GLSPRVGYTVTKKVGNAVVRNRVRRRLRE 73
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AVR A + G+DYV++ + D L PF +L R+R
Sbjct: 74 AVRTHAASDMAPGNDYVIVGREDVLTTPFGQLKAELSRRLR 114
>gi|254473832|ref|ZP_05087227.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
gi|211957218|gb|EEA92423.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
Length = 152
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
N+ LKKR +F V KG F L+ S+ PR+G+TVTKK G +VER+R++R
Sbjct: 18 NMKTLKKRSEFLTVAKGGRTARRAFVLQAAKTR-SDGAPRMGYTVTKKTGNSVERSRIKR 76
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
RL+ AV + + G DYVL+ +R AL PF++L
Sbjct: 77 RLRAAVASLDLDIAQTGADYVLVGRRAALSQPFEDLLKDL 116
>gi|110632736|ref|YP_672944.1| ribonuclease P [Mesorhizobium sp. BNC1]
gi|123058254|sp|Q11LE6|RNPA_MESSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110283720|gb|ABG61779.1| ribonuclease P protein component [Chelativorans sp. BNC1]
Length = 120
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR +F V++G +G F LE+L + + PRVG TVTKK G AVERNR+RRRL+E
Sbjct: 13 LTKRAEFLAVQRGLKLRGRLFLLELLARGDDDP-PRVGITVTKKVGNAVERNRIRRRLRE 71
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AVR+ A + G DYV++ +R+ L PF L + R+R NK
Sbjct: 72 AVRVHAADDMATGTDYVIVGRREILDAPFGALKDELSRRIRGNK 115
>gi|306840924|ref|ZP_07473666.1| ribonuclease P protein component [Brucella sp. BO2]
gi|306289047|gb|EFM60309.1| ribonuclease P protein component [Brucella sp. BO2]
Length = 113
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
PRVGFTVTKK G AV RNR+RRRLKEA+R A + DYV++A+ AL PF +L
Sbjct: 23 PRVGFTVTKKNGNAVIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTE 82
Query: 101 HFVERVRRNKRSYYSGK 117
R++ GK
Sbjct: 83 ELSRRIKAKGERRSGGK 99
>gi|323137578|ref|ZP_08072655.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
gi|322397204|gb|EFX99728.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
Length = 148
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
PR GFTVT+K AV RNR+RRRLKEA+R+ + G DYV +A+R L PF ++ +
Sbjct: 62 PRFGFTVTRKVAGAVGRNRIRRRLKEALRVSGASGAREGRDYVFVARRGTLTAPFNDIIS 121
Query: 101 HFVE 104
E
Sbjct: 122 QMAE 125
>gi|153008693|ref|YP_001369908.1| ribonuclease P [Ochrobactrum anthropi ATCC 49188]
gi|166226731|sp|A6WYM5|RNPA_OCHA4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151560581|gb|ABS14079.1| ribonuclease P protein component [Ochrobactrum anthropi ATCC 49188]
Length = 141
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-------PRVGFTVTKKQGCAV 55
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G AV
Sbjct: 6 QILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQTAKIGEKPRAGFTVTKKNGNAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 66 IRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRGD 125
Query: 116 GK 117
GK
Sbjct: 126 GK 127
>gi|300024926|ref|YP_003757537.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
gi|299526747|gb|ADJ25216.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
Length = 154
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV----LNNNNSNLLPRVGFTVTKKQGCAVE 56
+ + LK R +F V+ G P F +EV N R GFT+TKK G AV
Sbjct: 18 IPTLQTLKSRPEFLAVRGGRRSSTPAFLIEVRERPATENGGTA--RFGFTITKKIGNAVT 75
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RNR+RRRLK A AEG + DYV++A+ AL PF L
Sbjct: 76 RNRIRRRLKAAFAATAEGRARPSCDYVIVARHAALDRPFAAL 117
>gi|239832644|ref|ZP_04680973.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
gi|239824911|gb|EEQ96479.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
Length = 179
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-------PRVGFTVTKKQGCAV 55
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G AV
Sbjct: 44 QILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQAARIGDKPRAGFTVTKKNGNAV 103
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 104 IRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRGD 163
Query: 116 GK 117
GK
Sbjct: 164 GK 165
>gi|254438989|ref|ZP_05052483.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
gi|198254435|gb|EDY78749.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
Length = 139
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I ++K R F K + ++++ + + + RVGFT +KK G AV RNR +RR
Sbjct: 32 IVVMKTRANFVAASKARYQTAASLTVQMRDRRDGDNAVRVGFTCSKKVGNAVARNRAKRR 91
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRD 89
L+E RL + K GHDYVLI K+D
Sbjct: 92 LREIARLDLPTLAKAGHDYVLIGKKD 117
>gi|114706828|ref|ZP_01439728.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
gi|114537776|gb|EAU40900.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
Length = 128
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M+ L KR +F ++G GP+F +E L + PR G TVTKK G AV RNR+
Sbjct: 1 MTKAGRLTKRSEFLAARRGRRLNGPYFFIETLVRGDDE-PPRFGLTVTKKVGNAVARNRI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RRRL+EA+R A +++G DYV++A+RD L + F L + R R
Sbjct: 60 RRRLREAIRTAAGSEMRNGVDYVIVARRDVLNVAFVTLKDELSRRFSR 107
>gi|182680229|ref|YP_001834375.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636112|gb|ACB96886.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 227
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV--------LKHGHDYVLIAKRDA 90
L R GFTVT+K G AV+RNR+RRRLKEA+R A+ + K GHDYV+IA+ A
Sbjct: 98 LPARFGFTVTRKTGHAVQRNRIRRRLKEALRHLADTLADPSADLPAKPGHDYVIIARPAA 157
Query: 91 LFIPFKEL 98
L +PF +L
Sbjct: 158 LAMPFCDL 165
>gi|313887636|ref|ZP_07821318.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846245|gb|EFR33624.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 111
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 5 CILKKRRQFALVKKGELRKGP-FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
C LKK +F V + G + +L NN PR G T TKK G AV RN +RRR
Sbjct: 4 CYLKKNSEFQRVYSNKKISGSRYITLFTAKNNRD--YPRFGITATKKVGNAVNRNFIRRR 61
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
LK +R + + K G+DYV +AK+DA FK+ N F ++R K+
Sbjct: 62 LKHLLRENSHNI-KPGYDYVFVAKKDACDSDFKDFKNSFFSVLKRQKK 108
>gi|315498838|ref|YP_004087642.1| ribonuclease p protein component [Asticcacaulis excentricus CB
48]
gi|315416850|gb|ADU13491.1| ribonuclease P protein component [Asticcacaulis excentricus CB
48]
Length = 112
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+LK R F K + P ++ N+ + R+GFT TKK G +VERNR +RR++
Sbjct: 5 VLKNRSDFLAANKAAYQARPTVVIQARFRNDGDETIRIGFTATKKTGGSVERNRAKRRMR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
EA R + GHDYV IA RDA
Sbjct: 65 EAARTLLPDHGRPGHDYVFIA-RDA 88
>gi|254451170|ref|ZP_05064607.1| ribonuclease P [Octadecabacter antarcticus 238]
gi|198265576|gb|EDY89846.1| ribonuclease P [Octadecabacter antarcticus 238]
Length = 129
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++K R F K ++++ + + + RVGFT +KK G AV RNR +RRL
Sbjct: 23 AVMKTRANFVAASKARYETATSLTVQMRDRRDGDDSMRVGFTCSKKVGNAVARNRAKRRL 82
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRD 89
+E RL + K GHDYVLI K+D
Sbjct: 83 REIARLDLPHLAKPGHDYVLIGKKD 107
>gi|295690946|ref|YP_003594639.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
gi|295432849|gb|ADG12021.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
Length = 149
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+KR F L K L +G F +++ ++ + + RVGFT TKK G AVERNR +RRL+
Sbjct: 15 LRKRADFLLAAKAPALSRGAVF-IQMRKRSDEDPVVRVGFTATKKIGGAVERNRAKRRLR 73
Query: 66 EAVRLCAEGVLKHGHDYVLIAK 87
EA RL + HDYV IA+
Sbjct: 74 EAARLVLPLHARPSHDYVFIAR 95
>gi|217977384|ref|YP_002361531.1| ribonuclease P protein component [Methylocella silvestris BL2]
gi|217502760|gb|ACK50169.1| ribonuclease P protein component [Methylocella silvestris BL2]
Length = 150
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQGCAVERNRMRRR 63
LK+R F KG+ F+L+ + S+ PR GFTVTKK G AV RNR+RRR
Sbjct: 13 LKRRADFVRAAKGKRFHAKGFTLQAVERPESDRATAAPRFGFTVTKKVGGAVVRNRIRRR 72
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
KEA+R + DYV++A+ +AL + F + + + + + S SRK
Sbjct: 73 FKEALRTAEALPARPCRDYVVVARIEALRLAFATMQVELIRAIDKIESSQSKPDGRSRK 131
>gi|16125021|ref|NP_419585.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|221233744|ref|YP_002516180.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
gi|21542224|sp|Q9AA39|RNPA_CAUCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808056|sp|B8H1E9|RNPA_CAUCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13422005|gb|AAK22753.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|220962916|gb|ACL94272.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
Length = 149
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+KR F L K L +G F +++ + + RVGFT TKK G AVERNR +RRL+
Sbjct: 13 LRKRPDFLLAAKAPALSRGAVF-IQMRQRTDDDPTVRVGFTATKKIGGAVERNRAKRRLR 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAK 87
EA RL + HDYV IA+
Sbjct: 72 EAARLVLPLHARPSHDYVFIAR 93
>gi|254502535|ref|ZP_05114686.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
gi|222438606|gb|EEE45285.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
Length = 137
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F V KG F ++ L + + PR+G+TVTKK G + R+R++RR
Sbjct: 1 MNTLKKRSDFLAVAKGGRVGRRAFVVQGLQRS-AEAAPRIGYTVTKKTGNSAVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
L+ AV A + D+VL+A+ AL +PF L
Sbjct: 60 LRAAVAELASAEIPQNADFVLVARESALTLPFPNLV 95
>gi|89053132|ref|YP_508583.1| ribonuclease P protein component [Jannaschia sp. CCS1]
gi|88862681|gb|ABD53558.1| ribonuclease P protein component [Jannaschia sp. CCS1]
Length = 132
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ L KR F L + P F L+ N ++ R+GFT +KK G AV RNR
Sbjct: 21 VPSLVTLTKRADFLLAARAARVPTPAFLLQARNRDDGTSDIRIGFTCSKKVGNAVARNRA 80
Query: 61 RRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKR 111
+RRL+E R L EG G DYVLI ++DA FK + +R+ R
Sbjct: 81 KRRLREIARAVLPTEGT--PGWDYVLIGRKDATATHDFKAMQADLARALRKAHR 132
>gi|220925222|ref|YP_002500524.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
gi|219949829|gb|ACL60221.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
Length = 141
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
L +G LR+ E + ++ L R GFTVTK+ G A ERNR+RRRLK AV
Sbjct: 31 LTAQGRLRE-----AETAPDGSAGL--RFGFTVTKRTGHATERNRIRRRLKAAVAAIGTD 83
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHF 102
D VLI +R+AL PF+ L +
Sbjct: 84 SADQPLDVVLIGRREALSAPFEVLVDDI 111
>gi|56552521|ref|YP_163360.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241762239|ref|ZP_04760321.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753819|ref|YP_003226712.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56544095|gb|AAV90249.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373286|gb|EER62905.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258553182|gb|ACV76128.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 154
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +LK+R F +G+ P F L V + ++ N RVG+TVTKK G AV RNR++RR
Sbjct: 47 VAVLKRRADFLAANRGKRVAMPAFVLLVYHRHDDNPDMRVGYTVTKKTGNAVVRNRIKRR 106
Query: 64 LKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ V+ L GV G D++LI +R A F +L + + R +R
Sbjct: 107 FRALVQSLLPVGGV--EGADHILIGRRAAFHGNFDDLYRQLSKALARMRR 154
>gi|304439082|ref|ZP_07399001.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372441|gb|EFM26028.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 106
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRR 63
ILKK R F V K + G LN NN LP RVGF +TKK G AV RN+ +RR
Sbjct: 4 ILKKDRDFQKVYKKKNVTGNRVFTMFLNKNN---LPTTRVGFVITKKFGNAVTRNKFKRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
L+ +R + LK G+D VLI K+D +I + EL F E V R K
Sbjct: 61 LRMILR---DYDLKPGYDVVLILKKDKSYIDYSELKRSF-EHVLRKK 103
>gi|260577131|ref|ZP_05845108.1| ribonuclease P protein component [Rhodobacter sp. SW2]
gi|259020605|gb|EEW23924.1| ribonuclease P protein component [Rhodobacter sp. SW2]
Length = 144
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + I+ KR F + P F L+ N +S RVGFT +KK G AV RNR
Sbjct: 26 LPKLAIIGKRADFLRAASARRQGTPGFLLQARNRGDSQPGVRVGFTCSKKIGNAVARNRA 85
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
+RRL+E R + + G DYVL+ + A
Sbjct: 86 KRRLREVARAVLPKLAQPGWDYVLVGRPSATI 117
>gi|258517433|ref|YP_003193655.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
gi|257781138|gb|ACV65032.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
Length = 109
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N L+K ++ V G FF + + N+ +N R GF+V KK G AV RNR
Sbjct: 1 MANFITLRKNSEYKKVYVTGRSVANRFFVIFAITNSLNN--SRFGFSVGKKIGKAVLRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+RR LKE RL + + G+D+V++A++D + + F ++ NH + V
Sbjct: 59 IRRLLKEICRLNND-IFPVGYDFVILARKDVVTLNFDQMKNHLAKLV 104
>gi|329848430|ref|ZP_08263458.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
gi|328843493|gb|EGF93062.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
Length = 116
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
R G + +++++++ RVGFT TKK G AV RNR++RRL+EA R + + GHD
Sbjct: 21 RTGVVVQARLRDDDSADV--RVGFTATKKIGNAVVRNRVKRRLREAARSLLPDLGRPGHD 78
Query: 82 YVLIAKRDALFIPFKELCN 100
YV IA+ P++ L +
Sbjct: 79 YVFIARAGTFERPWQALLD 97
>gi|299143465|ref|ZP_07036545.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517950|gb|EFI41689.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 110
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFT+TKK G AV RN+++RRL+E RL + +L G+DYV + K+ + + +KEL
Sbjct: 43 RVGFTITKKIGNAVIRNKIKRRLREIYRLNFD-ILPEGYDYVFVVKKTCVDLSYKELEKS 101
Query: 102 FV 103
F+
Sbjct: 102 FI 103
>gi|118589755|ref|ZP_01547160.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
gi|118437841|gb|EAV44477.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
Length = 133
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR +F V KG F ++ L ++ + RVG+TVTKK G +V R+R++RR
Sbjct: 1 MDTLKKRSEFLAVAKGGRLGRRAFVVQGLKRDSDDA-SRVGYTVTKKTGNSVVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
L+ AV + D+VL+A+ AL +PF+++
Sbjct: 60 LRAAVAELVPEDIPQRADFVLVARDSALTLPFEKIVADL 98
>gi|114770130|ref|ZP_01447668.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
gi|114548967|gb|EAU51850.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
Length = 133
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L+ N N+ + RVGFT +KK G AV RNR +RRL+E L K G DYVLI
Sbjct: 48 FLLQARNRNDDDQTIRVGFTCSKKVGNAVARNRAKRRLREITNLILISSAKKGWDYVLIG 107
Query: 87 KRDAL----FIPFKELCNHFVERVRR 108
K++ FI K + ++++ +
Sbjct: 108 KKEVTASRDFIKLKNDLTYALQKIHK 133
>gi|296534913|ref|ZP_06897227.1| ribonuclease P protein component [Roseomonas cervicalis ATCC
49957]
gi|296264761|gb|EFH11072.1| ribonuclease P protein component [Roseomonas cervicalis ATCC
49957]
Length = 125
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M++ LK+RR+F V KG P L+ L L RVGFT TKK G AV RNR
Sbjct: 1 MASPPRLKRRREFLRVAGKGSRAARPSLVLQALPETAGPL--RVGFTATKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+RRL+EA RL G D VLI +
Sbjct: 59 AKRRLREAARLLLGQDAPPGWDLVLIGR 86
>gi|312113263|ref|YP_004010859.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
gi|311218392|gb|ADP69760.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
Length = 132
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVT-----------KKQGC 53
LK R +F V+KG P F ++ L + + PR GFTV+ +K+G
Sbjct: 3 TLKTRAEFKRVQKGRKWVTPAFIMQGLARADIESQGPRFGFTVSGKSVAVEGEGGRKRGK 62
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
AV+RNR RRRLKEAVRL + DYV+I + AL F++L
Sbjct: 63 AVDRNRARRRLKEAVRLTFAEAARPNLDYVIIGRAVALTRKFEDLL 108
>gi|282881773|ref|ZP_06290431.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
gi|281298383|gb|EFA90821.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
Length = 112
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V K + + NN N+ R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYKAKKISSCRYITLFTKKNNLNI-ARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRR K R + K G+DYV +AK+DA+ FK+L F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKDAVDCDFKDLKKDFLNVLKRQRK 109
>gi|86135815|ref|ZP_01054394.1| ribonuclease P protein component [Roseobacter sp. MED193]
gi|85826689|gb|EAQ46885.1| ribonuclease P protein component [Roseobacter sp. MED193]
Length = 146
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
RVGFT +KK G AV RNR +RRL+EA RL G+ + G DYVLI + +A
Sbjct: 76 RVGFTCSKKVGNAVARNRAKRRLREAARLVLPGIGRDGWDYVLIGRAEA 124
>gi|260427199|ref|ZP_05781178.1| ribonuclease P protein component [Citreicella sp. SE45]
gi|260421691|gb|EEX14942.1| ribonuclease P protein component [Citreicella sp. SE45]
Length = 144
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPF--FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L+KR F + R+ P F L+ ++ + RVGFT +KK G AV RNR +RR
Sbjct: 35 TLRKRPDF--LSAARARRQPVGSFLLQARLRDDGDTTIRVGFTCSKKVGNAVARNRAKRR 92
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR 88
L+E RL G+ + G DYVLI +R
Sbjct: 93 LREIARLTLPGLGQPGWDYVLIGRR 117
>gi|170743185|ref|YP_001771840.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
gi|168197459|gb|ACA19406.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
Length = 138
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R GFTVTKK G A ERNR+RRRLK A + D VLI +R+AL PF+ L N
Sbjct: 48 RFGFTVTKKTGHATERNRIRRRLKAAAAEIGPEHAERALDLVLIGRREALGAPFEVLVND 107
Query: 102 F 102
Sbjct: 108 I 108
>gi|73748804|ref|YP_308043.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|289432825|ref|YP_003462698.1| ribonuclease P protein component [Dehalococcoides sp. GT]
gi|123619804|sp|Q3ZY16|RNPA_DEHSC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|73660520|emb|CAI83127.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|288946545|gb|ADC74242.1| ribonuclease P protein component [Dehalococcoides sp. GT]
Length = 120
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +++ V +G GP ++ L NN L RVGF V+KK G AVERNR +R L+
Sbjct: 7 LTKREEYSQVLARGGTYIGPLAIMKTLPNNLE--LSRVGFIVSKKVGGAVERNRAKRILR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E++R LK G D V IA+ A + E+
Sbjct: 65 ESLRTTG---LKQGWDIVFIARAKAATVKCAEM 94
>gi|84499793|ref|ZP_00998081.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
gi|84392937|gb|EAQ05148.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
Length = 117
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCN 100
RVGFT +KK G AV RNR +RRL+E RL + G DYVLI RDA PF++L
Sbjct: 47 RVGFTCSKKVGNAVARNRAKRRLREVARLLLPDHGRPGWDYVLIGNRDATADRPFEDLKA 106
Query: 101 HFVERVRR 108
F+ +R+
Sbjct: 107 DFLHALRK 114
>gi|294675906|ref|YP_003576521.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
gi|294474726|gb|ADE84114.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
Length = 162
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVER 57
I IL+KR F + P F L+ + ++L+ RVGFT +KK G AV R
Sbjct: 29 TILILRKRADFLRAASAQRMSAPGFLLQARKRGEADTAAADLI-RVGFTCSKKLGNAVAR 87
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
NR +RRL+E RL + G DYVL+ + +A
Sbjct: 88 NRAKRRLREVARLGLPALGLPGWDYVLVGRPEA 120
>gi|89068156|ref|ZP_01155573.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
gi|89046395|gb|EAR52452.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
Length = 130
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F +G + F L+ RVGFT +KK G AV RNR +RRL+E
Sbjct: 25 LRERADFLAAARGRSKGTAGFHLQARRRPGGEGPARVGFTCSKKVGNAVARNRAKRRLRE 84
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFI-PFKEL 98
RL + G DYVLI +R A + PF ++
Sbjct: 85 IARLELPAHGRPGWDYVLIGRRTATDVTPFAQM 117
>gi|83941452|ref|ZP_00953914.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
gi|83847272|gb|EAP85147.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
Length = 136
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCN 100
RVGFT +KK G AV RNR +RRL+E RL + G DYVL+ + DA +PF +L +
Sbjct: 58 RVGFTCSKKVGNAVARNRAKRRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQS 117
Query: 101 HFVE 104
F +
Sbjct: 118 DFTK 121
>gi|83854928|ref|ZP_00948458.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
gi|83842771|gb|EAP81938.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
Length = 136
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCN 100
RVGFT +KK G AV RNR +RRL+E RL + G DYVL+ + DA +PF +L +
Sbjct: 58 RVGFTCSKKVGNAVARNRAKRRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQS 117
Query: 101 HFVE 104
F +
Sbjct: 118 DFTK 121
>gi|126733908|ref|ZP_01749655.1| ribonuclease P protein component [Roseobacter sp. CCS2]
gi|126716774|gb|EBA13638.1| ribonuclease P protein component [Roseobacter sp. CCS2]
Length = 186
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMR 61
++C+L KR F + P L+ RVGFT +KK G AV RNR +
Sbjct: 76 SVCVLTKRADFVRASNARRQGTPGIHLQGRKRAEGEAAGIRVGFTCSKKVGNAVARNRAK 135
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKEL 98
RRL+E R+ + G DYVL+ ++D +PF +L
Sbjct: 136 RRLREVARIVLPEMGLDGWDYVLVGRKDITATLPFDQL 173
>gi|310779693|ref|YP_003968026.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
gi|309749016|gb|ADO83678.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
Length = 113
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK QF + K ++ ++SL + N N +VGF V+KK G AV RNR++R +E
Sbjct: 4 LKKNEQFQNIYKTGIKAFGYYSLVYIKTNKENNHNQVGFVVSKKTGNAVCRNRLKRLFRE 63
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA 90
RL E +K +D V IAKR A
Sbjct: 64 YYRL-NEKKIKKSYDIVFIAKRTA 86
>gi|150392477|ref|YP_001322526.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
gi|166991073|sp|A6TXE9|RNPA_ALKMQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149952339|gb|ABR50867.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
Length = 111
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V +KG + ++NNN R+GFTV+KK G +V R+R++R +K
Sbjct: 7 LKKNQDFRMVYQKGRSMANKLLIIYIVNNNLE--YNRIGFTVSKKVGNSVVRSRVKRLMK 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E+ RL EG +K HD V IA+ + +KE+ + + +R+ K
Sbjct: 65 ESYRL-NEGKIKTSHDIVFIARPNCKESTYKEIESALLHLIRKMK 108
>gi|56695451|ref|YP_165799.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
gi|56677188|gb|AAV93854.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
Length = 141
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVL----NNNNSNLLPRVGFTVTKKQGCAVER 57
S I +L+KR F +K R+ S+ V + + + RVGFT +KK G AV R
Sbjct: 27 SGISVLRKRSDF--LKAARARRQGAGSMMVQARKRDAGEAEGI-RVGFTCSKKVGNAVAR 83
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHF 102
NR +RRL+EA RL + + G DYVLI + D PF L +
Sbjct: 84 NRAKRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDL 129
>gi|169825325|ref|YP_001692936.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302380136|ref|ZP_07268609.1| ribonuclease P protein component [Finegoldia magna
ACS-171-V-Col3]
gi|303234472|ref|ZP_07321110.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
gi|238687765|sp|B0S3V6|RNPA_FINM2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|167832130|dbj|BAG09046.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302312078|gb|EFK94086.1| ribonuclease P protein component [Finegoldia magna
ACS-171-V-Col3]
gi|302494427|gb|EFL54195.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
Length = 113
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ R++ +V K+G+ FSL V N+ R+GF+VTKK G AVERNR++R+L+
Sbjct: 7 LRDNREYNVVYKRGKTYYNRNFSLVVYNSKKG---TRIGFSVTKKYGNAVERNRIKRKLR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E VRL K G D V+I K++ + +K+L
Sbjct: 64 EIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQL 95
>gi|160932430|ref|ZP_02079820.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
gi|156868389|gb|EDO61761.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
Length = 114
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 5 CILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LK+ + F L +G+ P V+ N + L R+GFT +KK G AV+RNR RR
Sbjct: 8 TTLKENKDFRRLYHRGKSYVSPVLVTYVMKNRKAGL--RIGFTTSKKIGIAVQRNRSRRI 65
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++EA RL A LK G+D+V +A+ F+
Sbjct: 66 MREAFRLIAPE-LKTGYDFVFVARGKTPFV 94
>gi|255262795|ref|ZP_05342137.1| ribonuclease P [Thalassiobium sp. R2A62]
gi|255105130|gb|EET47804.1| ribonuclease P [Thalassiobium sp. R2A62]
Length = 133
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMRRRL 64
+LK R +F K + P F+L+ RVGFT +KK G AV RNR +RRL
Sbjct: 26 VLKNRSEFIAASKAQRVSSPSFNLQARPRQAGEADGIRVGFTCSKKVGNAVARNRAKRRL 85
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK 87
+E RL + G+DYVL+ +
Sbjct: 86 REIARLVLPSAGRDGYDYVLVGR 108
>gi|126728222|ref|ZP_01744038.1| ribonuclease P protein component [Sagittula stellata E-37]
gi|126711187|gb|EBA10237.1| ribonuclease P protein component [Sagittula stellata E-37]
Length = 130
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
PRVGFT +KK G AV RNR +RRL+E RL G ++ HDYVLI +
Sbjct: 56 PRVGFTCSKKVGNAVARNRAKRRLREIARLVMPGRVRPDHDYVLIGR 102
>gi|297588062|ref|ZP_06946706.1| ribonuclease P [Finegoldia magna ATCC 53516]
gi|297574751|gb|EFH93471.1| ribonuclease P [Finegoldia magna ATCC 53516]
Length = 113
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ R++ +V K+G+ FSL V N+ R+GF+VTKK G AVERNR++R+L+
Sbjct: 7 LRDNREYNVVYKRGKTYYNRNFSLVVYNSKKG---TRIGFSVTKKYGNAVERNRIKRKLR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E VRL K G D V+I K++ + +K+L
Sbjct: 64 EIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQL 95
>gi|149914929|ref|ZP_01903458.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
gi|149811117|gb|EDM70954.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
Length = 133
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 3 NICI--LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++C+ L +R F + + + P ++ + + RVGFT +KK G AV RNR
Sbjct: 19 SVCLQTLVERADFLRAARAQWKAMPSMVVQARDRKDGEATVRVGFTCSKKVGNAVARNRA 78
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKEL 98
+RRL+E R + G DYVLI + + +PF+ L
Sbjct: 79 KRRLREVARAVLPDAARPGWDYVLIGRANVTGALPFETL 117
>gi|85703243|ref|ZP_01034347.1| ribonuclease P protein component [Roseovarius sp. 217]
gi|85672171|gb|EAQ27028.1| ribonuclease P protein component [Roseovarius sp. 217]
Length = 111
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +L+KR F + + + ++ + + + RVGFT +KK G AV RNR +RR
Sbjct: 1 MSVLRKRSDFLAAARAQRQGTGSMMVQGRDRRDGDGAIRVGFTCSKKVGNAVARNRAKRR 60
Query: 64 LKEAVR--LCAEGVLKHGHDYVLIAKRDALFI-PFKEL 98
L+ R L AEG K G DYVLI + D PF+ L
Sbjct: 61 LRAVARELLAAEG--KSGWDYVLIGRADETATRPFEAL 96
>gi|67461278|sp|Q5LW06|RNPA_SILPO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 125
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVL----NNNNSNLLPRVGFTVTKKQGCAVER 57
S I +L+KR F +K R+ S+ V + + + RVGFT +KK G AV R
Sbjct: 11 SGISVLRKRSDF--LKAARARRQGAGSMMVQARKRDAGEAEGI-RVGFTCSKKVGNAVAR 67
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHF 102
NR +RRL+EA RL + + G DYVLI + D PF L +
Sbjct: 68 NRAKRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDL 113
>gi|254467228|ref|ZP_05080639.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
gi|206688136|gb|EDZ48618.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
Length = 141
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++ KRR F A + L++G + N + R+GFT +KK G AV RNR +RRL
Sbjct: 33 VMAKRRDFLACARPPALKQGTKGMMVQGRNRQDDGGIRMGFTCSKKVGNAVARNRAKRRL 92
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKEL 98
+EA R+ + G DYVLI + D PF+EL
Sbjct: 93 REAARMILPVHGRPGWDYVLIGRADETAQRPFEEL 127
>gi|126701307|ref|YP_001090204.1| ribonuclease P [Clostridium difficile 630]
gi|254977341|ref|ZP_05273813.1| ribonuclease P [Clostridium difficile QCD-66c26]
gi|255094671|ref|ZP_05324149.1| ribonuclease P [Clostridium difficile CIP 107932]
gi|255102898|ref|ZP_05331875.1| ribonuclease P [Clostridium difficile QCD-63q42]
gi|255308718|ref|ZP_05352889.1| ribonuclease P [Clostridium difficile ATCC 43255]
gi|255316425|ref|ZP_05358008.1| ribonuclease P [Clostridium difficile QCD-76w55]
gi|255519085|ref|ZP_05386761.1| ribonuclease P [Clostridium difficile QCD-97b34]
gi|255652268|ref|ZP_05399170.1| ribonuclease P [Clostridium difficile QCD-37x79]
gi|260685222|ref|YP_003216507.1| ribonuclease P [Clostridium difficile CD196]
gi|260688881|ref|YP_003220015.1| ribonuclease P [Clostridium difficile R20291]
gi|306521983|ref|ZP_07408330.1| ribonuclease P [Clostridium difficile QCD-32g58]
gi|123066515|sp|Q181T2|RNPA_CLOD6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115252744|emb|CAJ70589.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Clostridium difficile]
gi|260211385|emb|CBA67044.1| ribonuclease P protein component [Clostridium difficile CD196]
gi|260214898|emb|CBE07707.1| ribonuclease P protein component [Clostridium difficile R20291]
Length = 114
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKELCNHFVERV 106
EA RL + +K G+D V IA+ +DA F + + V+R
Sbjct: 67 EAYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKRT 110
>gi|126737061|ref|ZP_01752796.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
gi|126721646|gb|EBA18349.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
Length = 141
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+L KRR F + +K + V LN +S + RVGFT +KK G AV RNR +RR
Sbjct: 33 VLAKRRDFLACARPPAQKQGTKGMMVQGLNRRDSGGI-RVGFTCSKKVGNAVARNRAKRR 91
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRR 108
L+EA R+ + G DYVLI + + PF+EL V +R+
Sbjct: 92 LREAARMILPVHGRTGWDYVLIGRANETAQRPFEELKRDLVYALRK 137
>gi|302381829|ref|YP_003817652.1| ribonuclease P protein component [Brevundimonas subvibrioides
ATCC 15264]
gi|302192457|gb|ADL00029.1| ribonuclease P protein component [Brevundimonas subvibrioides
ATCC 15264]
Length = 138
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR QF KG L +G ++ L N+ + VGFT T+K G AV+RNR +RRL+
Sbjct: 10 LTKRPQFLAAAKGVSLARGAVV-VQRLERNDGDPAIGVGFTATRKVGGAVDRNRCKRRLR 68
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR 88
EA R G DYVLIA++
Sbjct: 69 EAARAMVPLHGLPGSDYVLIARQ 91
>gi|27383208|ref|NP_774737.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
gi|27356382|dbj|BAC53362.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
Length = 132
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G P F L+ ++S + R+GFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFLAVANGARVNSPAFVLQSRPRDDSGPI-RIGFTVTKKNGNAPERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
V+ +++ HDYVL+ +RDAL PF + + R+ +K + ++ K S+
Sbjct: 63 LVKRLEPVLMQPHHDYVLVGRRDALSRPFATMLDDL--RIAFSKPARHTAKEQSK 115
>gi|210624038|ref|ZP_03294155.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
gi|210153245|gb|EEA84251.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
Length = 115
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + K G+ + + +L N R+G +++KK G AV RNR+RR +K
Sbjct: 9 IKKDYEFRKIYKHGKSFANKYLVVYILKNKTDQ--TRIGISISKKVGNAVTRNRIRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLI---AKRDALFIPFKELCNHFVERVRRNK 110
E+ RL + +K G+D V I A +DA + ++ NH +R+NK
Sbjct: 67 ESYRLNIDENIKKGYDLVFISRVAAKDATYKDIEKAMNHL---MRKNK 111
>gi|197103857|ref|YP_002129234.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
gi|196477277|gb|ACG76805.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
Length = 120
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 1 MSNICI--LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVER 57
M ++ I LKKR F A K KG + + L+ R GFT TK+ G AV+R
Sbjct: 1 MPDLPIERLKKRADFLACAKAPSCAKGAVVVQARPRGDGAPLV-RAGFTATKRIGGAVQR 59
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
NR +RR++EA RL + G DYV IA+ P+ L +
Sbjct: 60 NRAKRRMREAARLLLPEHARPGVDYVFIARGGVTTRPWARLLDDV 104
>gi|147669565|ref|YP_001214383.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
gi|146270513|gb|ABQ17505.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
Length = 126
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 7 LKKRRQFALVKKGELRKGPFF-SLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRMRRRL 64
L KR +++ V R G + SL ++ +NL L RVGF V+KK G AVERNR +R L
Sbjct: 13 LTKREEYSQVLA---RGGTYIGSLAIMKTLPNNLELSRVGFIVSKKVGGAVERNRAKRIL 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+E++R LK G D V IA+ A + E+
Sbjct: 70 RESLRTTG---LKQGWDIVFIARAKAATVKCAEM 100
>gi|257470418|ref|ZP_05634509.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|317064626|ref|ZP_07929111.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|313690302|gb|EFS27137.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
Length = 116
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKKNEENL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA 90
R E LK G+D + +AKR A
Sbjct: 63 YYRKF-ENQLKDGYDIIFVAKRTA 85
>gi|253582578|ref|ZP_04859799.1| ribonuclease P [Fusobacterium varium ATCC 27725]
gi|251835448|gb|EES63988.1| ribonuclease P [Fusobacterium varium ATCC 27725]
Length = 116
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKKNEENL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA 90
R E LK G+D + +AKR A
Sbjct: 63 YYRKF-ENQLKDGYDIIFVAKRTA 85
>gi|125974854|ref|YP_001038764.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|256003889|ref|ZP_05428876.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281418691|ref|ZP_06249710.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|125715079|gb|ABN53571.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|255992227|gb|EEU02322.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281407775|gb|EFB38034.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|316941976|gb|ADU76010.1| ribonuclease P protein component [Clostridium thermocellum DSM
1313]
Length = 126
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N LKK +F L KKG+ G L V+ N+ + R+G TV KK G +V+RNR
Sbjct: 1 MKNTVPLKKNSEFLRLYKKGKFFAGKNIVLYVMKNDLG--INRLGITVGKKFGKSVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
M+R ++E RL E V K G+D V +A+ FK++
Sbjct: 59 MKRLIRENYRLYEEFV-KKGYDLVFVARNTEQMPDFKDV 96
>gi|307943179|ref|ZP_07658524.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
gi|307773975|gb|EFO33191.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
Length = 131
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR +F V KG F ++ L + RVG+TVTKK G +V R+R++RRL+
Sbjct: 4 LRKRAEFLAVSKGGRIGRRAFLIQGLARKGAAQ-SRVGYTVTKKTGNSVVRSRIKRRLRA 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V + D+V++A++DAL PF ++
Sbjct: 63 VVAALDPKEVPTEADFVIVARQDALTAPFPKMIADL 98
>gi|255657637|ref|ZP_05403046.1| ribonuclease P [Clostridium difficile QCD-23m63]
gi|296452682|ref|ZP_06894373.1| ribonuclease P [Clostridium difficile NAP08]
gi|296880065|ref|ZP_06904034.1| ribonuclease P [Clostridium difficile NAP07]
gi|296258464|gb|EFH05368.1| ribonuclease P [Clostridium difficile NAP08]
gi|296428932|gb|EFH14810.1| ribonuclease P [Clostridium difficile NAP07]
Length = 114
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKELCNHFVERV 106
E RL + +K G+D V IA+ +DA F + + V+R
Sbjct: 67 EVYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKRT 110
>gi|51894474|ref|YP_077165.1| ribonuclease P protein component [Symbiobacterium thermophilum
IAM 14863]
gi|60390356|sp|Q67J29|RNPA_SYMTH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51858163|dbj|BAD42321.1| ribonuclease P protein component [Symbiobacterium thermophilum
IAM 14863]
Length = 115
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVGF +K G AV RNR +RRL+EAVRL V + G+ V+IA++ AL +PF EL
Sbjct: 42 RVGFAAGRKLGKAVVRNRAKRRLREAVRLLWPRV-RQGYYIVVIARQAALDMPFPEL 97
>gi|57239308|ref|YP_180444.1| hypothetical protein Erum5800 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579274|ref|YP_197486.1| hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161387|emb|CAH58311.1| putative ribonuclease P protein component [Ehrlichia ruminantium
str. Welgevonden]
gi|58417900|emb|CAI27104.1| Hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
Length = 122
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNL---LPRVGFTVTKKQGCAVE 56
++ I +KKR F + G F L+V+ ++ L + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVL----KHGHDYVLIAKRDALFIPFKELCN 100
RN+++RR R+ AE V+ + G+ Y+LIA +D I F+++ +
Sbjct: 63 RNKVKRRF----RVLAESVIVQHARKGYYYILIASKDTPKISFQDMLS 106
>gi|58617328|ref|YP_196527.1| hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
gi|58416940|emb|CAI28053.1| Hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
Length = 122
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNL---LPRVGFTVTKKQGCAVE 56
++ I +KKR F + G F L+V+ ++ L + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVL----KHGHDYVLIAKRDALFIPFKELCN 100
RN+++RR R+ AE V+ + G+ Y+LIA +D I F+++ +
Sbjct: 63 RNKVKRRF----RVLAESVMVQHARKGYYYILIASKDTPKISFQDMLS 106
>gi|328545249|ref|YP_004305358.1| ribonuclease P protein component [polymorphum gilvum SL003B-26A1]
gi|326414991|gb|ADZ72054.1| Ribonuclease P protein component [Polymorphum gilvum SL003B-26A1]
Length = 136
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR +F V KG F L+ L + R G+TVTK+ G AVERNR+RRRL+
Sbjct: 3 TLKKRTEFLAVAKGGRADRRAFVLQGLRRGDDRGT-RFGYTVTKRTGNAVERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
AV + G + G DYVLI +R AL +PF +L
Sbjct: 62 AAVAALSPGDVPEGADYVLIGRRSALDMPFADLVRDL 98
>gi|108805994|ref|YP_645931.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
gi|108767237|gb|ABG06119.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
Length = 114
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++G + +G FS+ N+ + PR+G +V++K G AV RN +RRRL+E V + G
Sbjct: 20 RQGRVYRGRLFSVHAFPNDLGH--PRLGLSVSRKVGGAVTRNTVRRRLRE-VFFASVGEG 76
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ G D+V+ A+ A F+EL F +RR
Sbjct: 77 EGGLDFVISARPAAAEASFQELLAEFGRALRR 108
>gi|114765432|ref|ZP_01444547.1| ribonuclease P protein component [Pelagibaca bermudensis
HTCC2601]
gi|114542275|gb|EAU45305.1| ribonuclease P protein component [Roseovarius sp. HTCC2601]
Length = 120
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I L+KR +F + + ++ ++ + RVGFT +KK G AV RNR +RR
Sbjct: 9 IETLRKRPEFLAAARARRQPANAMLVQARERDDGSDTVRVGFTCSKKVGNAVARNRAKRR 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA 90
++E RL G DYVLI +RDA
Sbjct: 69 MREVARLTLPTKGVPGWDYVLIGRRDA 95
>gi|329888538|ref|ZP_08267136.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
gi|328847094|gb|EGF96656.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
Length = 138
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L +R QF KG + ++ L+ + + R+GFT T+K G AV RNR +RRL+E
Sbjct: 6 LLRRPQFLAAAKGVSQARGAVVVQQLDRADGDPTVRLGFTATRKIGGAVVRNRAKRRLRE 65
Query: 67 AVRLCAEGVLKHGHDYVLIAK 87
A RL + G DYV IA+
Sbjct: 66 AARLLTPLHGRAGCDYVFIAR 86
>gi|99080153|ref|YP_612307.1| ribonuclease P protein component [Ruegeria sp. TM1040]
gi|99036433|gb|ABF63045.1| ribonuclease P protein component [Ruegeria sp. TM1040]
Length = 145
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCN 100
RVGFT +KK G AV RNR +RRL+E RL + K G DYVLI + + PF+++
Sbjct: 74 RVGFTCSKKVGNAVTRNRAKRRLREIARLLLKEHGKPGWDYVLIGRAGETTTCPFEQMQK 133
Query: 101 HFVERVRR 108
F+ +R+
Sbjct: 134 DFLYALRK 141
>gi|237736111|ref|ZP_04566592.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
gi|229421822|gb|EEO36869.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
Length = 112
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK +F ++ + ++SL N++NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKNGEFQIIYNSGRKSFGYYSLIFFKKNDNNL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA 90
R E LK G+D + +AK+ A
Sbjct: 63 YYRQNEES-LKDGYDIIFVAKKTA 85
>gi|270308303|ref|YP_003330361.1| RNase P protein component [Dehalococcoides sp. VS]
gi|270154195|gb|ACZ62033.1| RNase P protein component [Dehalococcoides sp. VS]
Length = 126
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 7 LKKRRQFALVKKGELRKGPFFS-LEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRMRRRL 64
L KR +++ V G+ G + L V+ +NL RVGF V+KK G AVERNR +R L
Sbjct: 13 LTKREEYSRVLAGD---GTYIGQLAVMKALPNNLEFSRVGFIVSKKVGGAVERNRAKRIL 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+E++R A L+ G D V IA+ A + E+
Sbjct: 70 RESLRTIA---LRQGWDIVFIARAKAATVKCAEM 100
>gi|103485504|ref|YP_615065.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
gi|98975581|gb|ABF51732.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
Length = 240
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEV-LNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L KR +F +G P F L V ++S+ L +G+TV+KK G AV RNRM+R
Sbjct: 129 VRTLNKRSEFLAANRGLRFPMPGFVLLVRPRGDDSDAL-GIGYTVSKKVGNAVTRNRMKR 187
Query: 63 RLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +E R L G+ G D+VLI + A I F EL ++R
Sbjct: 188 RFRELARALLPESGIA--GADHVLIGRPGANDIAFAELGEQLDSALKR 233
>gi|254488787|ref|ZP_05101992.1| ribonuclease P protein component [Roseobacter sp. GAI101]
gi|214045656|gb|EEB86294.1| ribonuclease P protein component [Roseobacter sp. GAI101]
Length = 95
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCN 100
RVGFT +KK G AV RNR +RRL+E RL G DYVL+ ++ + I PF +L +
Sbjct: 22 RVGFTCSKKVGNAVARNRAKRRLREVARLALPDQGVDGMDYVLVGRQGSTAILPFCQLQD 81
Query: 101 HFVE 104
F +
Sbjct: 82 DFAK 85
>gi|84685366|ref|ZP_01013264.1| ribonuclease P protein component [Maritimibacter alkaliphilus
HTCC2654]
gi|84666523|gb|EAQ12995.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2654]
Length = 134
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 3 NICI--LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++C+ LKKR F + P F L+ + + + + RVG+T +KK G AV RNR
Sbjct: 22 SVCLETLKKRPDFLACARARKAPAPAFLLQGRDRRDDDTVVRVGYTASKKVGNAVARNRA 81
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+RRL+E R + G DYVL+A+
Sbjct: 82 KRRLREIARAVIADEGRAGWDYVLVAR 108
>gi|85709450|ref|ZP_01040515.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
gi|85688160|gb|EAQ28164.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
Length = 125
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+L KR F KG P F L N+ + R G TVTKK G AV RNRM+RR
Sbjct: 3 TVLTKRTDFLAANKGLRNARPGFVLLTRPNDGEGV--RYGITVTKKIGNAVVRNRMKRRF 60
Query: 65 KEAVRLC-AEGVLKHGHDYVLIAK 87
+E +R EG L + HD+VLI +
Sbjct: 61 RELLRAALPEGGLAN-HDHVLIGR 83
>gi|83950043|ref|ZP_00958776.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
gi|83837942|gb|EAP77238.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
Length = 87
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKEL 98
VGFT +KK G AV RNR +RRL+EA R + + G DYVLI K D PF+ L
Sbjct: 17 VGFTCSKKVGNAVARNRAKRRLREAARAVLPDLGRPGWDYVLIGKAEDTAARPFEAL 73
>gi|57234198|ref|YP_181758.1| ribonuclease P protein component [Dehalococcoides ethenogenes
195]
gi|123618575|sp|Q3Z7P1|RNPA_DEHE1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|57224646|gb|AAW39703.1| ribonuclease P protein component [Dehalococcoides ethenogenes
195]
Length = 120
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
NS L RVGF V+KK G AVERNR +R L+E++R LK G D V IA+ A +
Sbjct: 35 NSLELSRVGFIVSKKVGGAVERNRAKRILRESLRTTG---LKQGWDIVFIARAKAATVKC 91
Query: 96 KEL 98
E+
Sbjct: 92 AEM 94
>gi|304392413|ref|ZP_07374354.1| ribonuclease P protein component [Ahrensia sp. R2A130]
gi|303295517|gb|EFL89876.1| ribonuclease P protein component [Ahrensia sp. R2A130]
Length = 172
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQGCAVERN 58
+K+R F +KG F +++ LL RVGFTVTKK G AV RN
Sbjct: 27 MKRRADFVACRKGSRVSRDAFGIQLRKRKPDELLGPGEKLHHFRVGFTVTKKIGNAVVRN 86
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
R++RRL+ A G+D V +A AL PF+ L +
Sbjct: 87 RIKRRLRAASAEITVPESLAGYDAVFMANEPALGAPFQTLTAQMTQ 132
>gi|269122723|ref|YP_003310900.1| ribonuclease P protein component [Sebaldella termitidis ATCC
33386]
gi|268616601|gb|ACZ10969.1| ribonuclease P protein component [Sebaldella termitidis ATCC
33386]
Length = 107
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F+ V +KG+ + + + LNNN + R GF +KK G AV+RNR++R
Sbjct: 1 MITLKKEKEFSKVYQKGQKKHTKYVIIIFLNNNLNE--KRFGFVASKKTGNAVKRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAK 87
+E VRL K +DY++I K
Sbjct: 59 LFREVVRLNYNK-FKENYDYIIIGK 82
>gi|188587523|ref|YP_001919068.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229470481|sp|B2A474|RNPA_NATTJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|179352210|gb|ACB86480.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 115
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS I LKK QF V + G+ + L VL N+ + + RVGF+V KK G +V RNR
Sbjct: 1 MSQIVTLKKNYQFRRVFRYGQSYATKYIVLFVLENSLN--INRVGFSVGKKVGNSVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+E RL +++ G+D +L+A+ A + + + F+ +++K
Sbjct: 59 VKRLLREVYRLNNPNMMQ-GYDLILLARFRADELDYHKCQREFIRLTKKSK 108
>gi|259416985|ref|ZP_05740905.1| ribonuclease P [Silicibacter sp. TrichCH4B]
gi|259348424|gb|EEW60201.1| ribonuclease P [Silicibacter sp. TrichCH4B]
Length = 106
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 28 SLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
S+ V + P RVGFT +KK G AV RNR +RRL+E RL + K G DYVLI
Sbjct: 20 SMMVQGRKRGDDGPLRVGFTCSKKVGNAVMRNRAKRRLREIARLLLKEHGKPGWDYVLIG 79
Query: 87 KR-DALFIPFKELCNHFVERVRR 108
+ + PF+++ F +R+
Sbjct: 80 RAGETTTCPFEQMQKDFAYALRK 102
>gi|300814762|ref|ZP_07095010.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511149|gb|EFK38401.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 112
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V + + + NN N+ R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYRAKKISSCRYITLFTKKNNLNI-ARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRR K R + K G+DYV +AK++A+ F + F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKEAVDCDFTDFKKDFLNVLKRQRK 109
>gi|169334990|ref|ZP_02862183.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
gi|169257728|gb|EDS71694.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
Length = 121
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
F++L+ N R+GF+++KK G AV RN+++RRL+E RL A + K G+D + I
Sbjct: 27 FYTLKTENE------SRIGFSISKKVGNAVIRNKIKRRLREISRLNAYQI-KDGYDIICI 79
Query: 86 AKRDALFIPFKELCNHFVERVRR 108
+ A I + L N F+ V++
Sbjct: 80 VRVYAKDIDYNTLNNSFLHLVKK 102
>gi|260432497|ref|ZP_05786468.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416325|gb|EEX09584.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
Length = 90
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCN 100
RVGFT +KK G AV RNR +RRL+EA R + G DYVLI + + PF L +
Sbjct: 17 RVGFTCSKKVGNAVARNRAKRRLREAARAVLPDHGQDGWDYVLIGRAEVTAARPFDALLD 76
Query: 101 HFVERVRR 108
+ +R+
Sbjct: 77 DLRQALRK 84
>gi|299820844|ref|ZP_07052733.1| ribonuclease P [Listeria grayi DSM 20601]
gi|299817865|gb|EFI85100.1| ribonuclease P [Listeria grayi DSM 20601]
Length = 133
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F V K+G+ F + +L +++ R+G +V+KK G AV RNR++R ++
Sbjct: 23 IKKNQEFQTVFKRGKSVANRQFVVYLLKQESADTHFRIGLSVSKKIGNAVCRNRVKRYIR 82
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
++ EG + GHDY++IA+ A + F E+
Sbjct: 83 QSFHEL-EGEVASGHDYIIIARNPAANMSFHEV 114
>gi|220933192|ref|YP_002510100.1| ribonuclease P protein component [Halothermothrix orenii H 168]
gi|219994502|gb|ACL71105.1| ribonuclease P protein component [Halothermothrix orenii H 168]
Length = 121
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
NN + N R+GF+++K+ G AV RN++RRRLKE +RL +K G+D V I ++ ++
Sbjct: 41 NNLDKN---RIGFSISKRVGKAVVRNKLRRRLKEIIRLTDN--IKSGYDLVFIGRKPSVS 95
Query: 93 IPFKEL 98
+ + +L
Sbjct: 96 LDYHDL 101
>gi|163745587|ref|ZP_02152947.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
gi|161382405|gb|EDQ06814.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
Length = 140
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLN--NNNSNLLP-RVGFTVTKKQGCAVERNRMRRR 63
L KR F + + P F L++ + + P RVGFT +KK G AV RNR +RR
Sbjct: 29 LTKRPDFQRASRAKRVATPGFILQMRPRREDEPSAAPIRVGFTCSKKVGNAVARNRAKRR 88
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L+E RL G DYV + +R+A
Sbjct: 89 LREIARLTLPQAGLAGMDYVFVGRREA 115
>gi|254510261|ref|ZP_05122328.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
gi|221533972|gb|EEE36960.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
Length = 90
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCN 100
RVGFT +KK G AV RNR +RRL+EA R + G DYVLI + + P+ L +
Sbjct: 17 RVGFTCSKKVGNAVARNRAKRRLREAARTVLSTQGRDGWDYVLIGRAEVTATRPYDALLD 76
Query: 101 HF 102
Sbjct: 77 DL 78
>gi|167644609|ref|YP_001682272.1| ribonuclease P protein component [Caulobacter sp. K31]
gi|167347039|gb|ABZ69774.1| ribonuclease P protein component [Caulobacter sp. K31]
Length = 148
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 7 LKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR F K +G F +++ ++ + L RVGFT TKK G +V+RNR +RRL+
Sbjct: 19 LKKRPDFLKAAKAPALARGAVF-MQMRPRHDDDPLIRVGFTATKKIGGSVQRNRAKRRLR 77
Query: 66 EAVRLCAEGVLKHGH---DYVLIAK 87
EA RL + HG DYV IA+
Sbjct: 78 EAARLL---LPLHGRPSCDYVFIAR 99
>gi|326793320|ref|YP_004311141.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
gi|326544084|gb|ADZ85943.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
Length = 112
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRR 63
LKK +F V +KG+ + + NN LP R+G +V+KK G +V R+R+ R
Sbjct: 7 LKKNYEFRTVYRKGKSLANKYLVVYRYKNN----LPENRLGISVSKKVGNSVVRSRVTRL 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++E+ RL E + K G D+V+IA+ A ++++ N + ++++K
Sbjct: 63 IRESYRLNEEFIDKEGWDFVVIARSAANGASYQDISNALINLLKQHK 109
>gi|229917457|ref|YP_002886103.1| ribonuclease P [Exiguobacterium sp. AT1b]
gi|259494107|sp|C4KZZ5|RNPA_EXISA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229468886|gb|ACQ70658.1| ribonuclease P protein component [Exiguobacterium sp. AT1b]
Length = 114
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
RVG +V+KK G AVERNRM+R ++E++RL V +DYV+IA++ A + E+
Sbjct: 41 RVGLSVSKKLGNAVERNRMKRLMRESLRLLEPNVA--PNDYVIIARKPATALTQSEVT 96
>gi|302390795|ref|YP_003826616.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
gi|302201423|gb|ADL08993.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
Length = 116
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L K +F V K R G P FS+ N R+G +V KK G +V RNR++RR++
Sbjct: 7 LTKNFEFMRVYKKGRRAGCPLFSMYAKENQLG--YSRLGISVRKKTGKSVVRNRIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
EA R E V K G+D V+ K DA F E+
Sbjct: 65 EAFRTNMENV-KKGYDIVVSVKEDAREADFNEI 96
>gi|88607890|ref|YP_504920.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
gi|88598953|gb|ABD44423.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
Length = 120
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP-----RVGFTVTKKQGCA 54
+ + LKKR++FA + G K L+ +++ S P RVGFTV+KK G A
Sbjct: 3 LKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGS-PGCESVRVGFTVSKKSGNA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V RNR++RRL+ A + G Y+LI+ R + EL V +RR
Sbjct: 62 VVRNRIKRRLRVAAQNVIAKNAHRGFYYILISSRRLADVGMGELLYSLVTCLRR 115
>gi|94967250|ref|YP_589298.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
gi|94549300|gb|ABF39224.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
Length = 154
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELC 99
PR+G+TV++ G AV+RNRM+RRL+EA R C G D V+ K+ L F L
Sbjct: 56 PRIGYTVSRALGGAVDRNRMKRRLREATRACWAGFRPTFAVDVVVNPKKTVLATDFAVLT 115
>gi|119383624|ref|YP_914680.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
gi|119373391|gb|ABL68984.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
Length = 149
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L+KR F + P F L+ + RVGFT +KK G AV RNR +RR
Sbjct: 34 TLRKRADFLRAASARRQGMPGFLLQARRRPEGEAGQAIRVGFTCSKKLGNAVTRNRAKRR 93
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L+ R GV + G DYVL+ + A
Sbjct: 94 LRALAREVMPGVARPGWDYVLVGRPGA 120
>gi|322437356|ref|YP_004219568.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
gi|321165083|gb|ADW70788.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
Length = 128
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
FFS+ + PRVG TV K G AV+RNR++RRL+E VR A+ L H D +L
Sbjct: 36 FFSIRPEGRRSDTPGPRVGLTVGKVLGKAVDRNRIKRRLRECVRHHAQ-TLTHPVDVILH 94
Query: 86 AKRDAL 91
+R L
Sbjct: 95 PRRTVL 100
>gi|84517255|ref|ZP_01004610.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
gi|84508930|gb|EAQ05392.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
Length = 130
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 4 ICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMR 61
+ +L KR F LR+G P L+ RVGFT +KK G AV RNR +
Sbjct: 21 LTVLTKRADFVRASHA-LRQGTPGIHLQARERARGEAAGIRVGFTCSKKVGNAVARNRAK 79
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCNHFVERVRRNKRSYYS 115
RRL+E R + G DYVL+ + D +PF L V +RR R ++
Sbjct: 80 RRLREVARQVLPEQGRDGWDYVLVGRHDVTASLPFDAL----VADLRRALRKVHA 130
>gi|150021504|ref|YP_001306858.1| ribonuclease P protein component [Thermosipho melanesiensis
BI429]
gi|149794025|gb|ABR31473.1| ribonuclease P protein component [Thermosipho melanesiensis
BI429]
Length = 131
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK R+ F L + G+ + P+F + L N R GF+V KK G AV RNR++R ++
Sbjct: 17 LKLRKDFKRLYETGKSIQVPYFVIIYLKNGFE--YSRFGFSVRKKFGKAVRRNRLKRWMR 74
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR 88
E +R + V+ G+DY++IA++
Sbjct: 75 EVIR-TNKYVIPKGYDYLIIARK 96
>gi|73667200|ref|YP_303216.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
gi|72394341|gb|AAZ68618.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
Length = 119
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP---RVGFTVTKKQGCAVE 56
+ + LKKR+ F + G G L+V+ + LL RVGFTV+KK G AV
Sbjct: 3 LKGVTTLKKRKCFLFARNNGAFIGGFGLFLQVVKEPHGELLDGTIRVGFTVSKKVGKAVI 62
Query: 57 RNRMRRRLKEAVRLCAEGVL-KH---GHDYVLIAKRDALFIPFKELC 99
RN+++RR R+ A VL KH G+ Y+LI R + FKE+
Sbjct: 63 RNKVKRRF----RILARDVLVKHANKGYYYILIGNRYTPKVSFKEMS 105
>gi|167770832|ref|ZP_02442885.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
gi|167666872|gb|EDS11002.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
Length = 111
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P + L N + R+G T TKK G AV+RNR RR ++EA L E L G+D+VL
Sbjct: 26 PVLVVYALKNRSGE--NRLGLTATKKVGKAVKRNRARRVMREAFYLI-EQELAQGYDFVL 82
Query: 85 IAKRDALFIPFKELCNHF 102
+A+ F+ +++
Sbjct: 83 VARVRTAFVSMQQVLEAL 100
>gi|85858987|ref|YP_461189.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
gi|123516277|sp|Q2LSG2|RNPA_SYNAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85722078|gb|ABC77021.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
Length = 119
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
I K+R + + G+ F++ V N+ PR+G TVTKK G AV+RNR++R ++
Sbjct: 12 IRKRRSYLQIYQHGKRSFTKHFTIVVSENDLD--FPRLGMTVTKKIGNAVKRNRIKRLIR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
E RL + K D V+IAK + + + ++C
Sbjct: 70 EFFRLNKDR-FKASQDIVIIAKGNTSSMKYADVC 102
>gi|149186356|ref|ZP_01864669.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
gi|148829945|gb|EDL48383.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
Length = 127
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
++ +++KR F +G P F L L N R G TVTKK G AV RNRM+R
Sbjct: 4 SLSVIRKRSDFLAANRGTRNAKPGFVL--LTRPNEGQGKRYGITVTKKIGNAVVRNRMKR 61
Query: 63 RLKEAVRLC-AEGVLKHGHDYVLIAKRDAL 91
R +E + +G L HD++LI + +
Sbjct: 62 RFRELLWAALPDGGLPD-HDHILIGREGGV 90
>gi|303240055|ref|ZP_07326576.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
gi|302592324|gb|EFL62051.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
Length = 114
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F L KKG+ + L L+N + + R+G T +KK G +V+RNR+RR +K
Sbjct: 7 IKKNKEFLKLYKKGKFYVAKYLVLYTLDNKSK--VNRLGITASKKFGGSVKRNRIRRLIK 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E R EG L G D V +A+ F ++
Sbjct: 65 ECYR-HYEGQLNEGFDLVFVARSSEDMPSFSDI 96
>gi|144899248|emb|CAM76112.1| Bacterial ribonuclease P protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 140
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
R+GFT +KK G +V RNR RRRLK AV + + G DYV+I +R+ +
Sbjct: 52 RIGFTCSKKVGNSVARNRARRRLKAAVDELFPALARPGLDYVVIGRRETV 101
>gi|220930848|ref|YP_002507757.1| ribonuclease P [Clostridium cellulolyticum H10]
gi|220001176|gb|ACL77777.1| ribonuclease P protein component [Clostridium cellulolyticum H10]
Length = 121
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G ++ +L N S L R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRNITVYILPNKQS--LNRIGISVSKKAGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+R ++E+ R E + +G+D ++IA R +P
Sbjct: 59 KKRLIRESYRYFEE-YISNGYD-IVIAARAGESVP 91
>gi|159042888|ref|YP_001531682.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
gi|157910648|gb|ABV92081.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
Length = 129
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
RVGFT +KK G AV RNR +RRL+E RL + G DYVLI ++ A
Sbjct: 54 RVGFTCSKKVGNAVARNRAKRRLREIARLELPTNGRDGWDYVLIGRKAA 102
>gi|114798810|ref|YP_759143.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
gi|114738984|gb|ABI77109.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
Length = 121
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 44 GFTVTKKQGCAVERNRMRRRLKEAV-RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
G+T TKK G AVERNR +RRL+EA RL A+ L G DYV IA+ L + L +
Sbjct: 53 GYTATKKVGGAVERNRAKRRLREASRRLLAQYGLP-GWDYVFIAREATLDTGWARLLDDM 111
>gi|326202770|ref|ZP_08192637.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
gi|325986847|gb|EGD47676.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
Length = 121
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G + ++ +L N S R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRYITVYILPNKQS--FNRIGISVSKKAGKAVIRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+R ++E+ R E + +G D +++A R +P
Sbjct: 59 KKRLIRESYRYF-EDYISNGFD-IVVAARSGESVP 91
>gi|323703943|ref|ZP_08115573.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
gi|323531101|gb|EGB21010.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
Length = 109
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LKK F + + G+ + L + N +S + R GF+++KK G AV RNR
Sbjct: 1 MSKFVPLKKNLDFKNIYQYGKSAANRYLVLYMHPNGSS--IRRFGFSISKKVGNAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+RR LKE RL + GHDYV I ++ + + +L H
Sbjct: 59 LRRLLKEICRLNLDR-FPDGHDYVFIVRQPSFDQGYHQLEKH 99
>gi|115522670|ref|YP_779581.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
gi|115516617|gb|ABJ04601.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
Length = 113
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G P F L+ ++ + RVGFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFIAVANGARANRPAFVLQARGRDDDGPV-RVGFTVTKKIGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V+ V++ DYVL+ +RDAL F + +
Sbjct: 63 LVKRVDGAVIRPHSDYVLVGRRDALSRGFSVMLDDL 98
>gi|307243393|ref|ZP_07525550.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
gi|306493203|gb|EFM65199.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
Length = 125
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+L + N + R+G +++KK G A ERNR+RR +KEA RL + + G+D V IA+
Sbjct: 29 NLVIYTMKNKSDKSRIGISISKKVGKAHERNRIRRCIKEAYRLNIDDKVLGGYDLVFIAR 88
Query: 88 RDALFIPFKEL 98
+A ++EL
Sbjct: 89 INAADKDYREL 99
>gi|327398262|ref|YP_004339131.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
gi|327180891|gb|AEA33072.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
Length = 112
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
PFF L L + NL +VG +KK G AV+RNR +RRL+E VRL ++ L + VL
Sbjct: 29 PFFVLFTLKDK-ENL--KVGVVASKKIGKAVKRNRAKRRLREIVRL-SQPFLPNNIWIVL 84
Query: 85 IAKRDALFIPFKELCNHFVERVR 107
IA++ L F+ + N F+ +++
Sbjct: 85 IARKAVLEADFQRMQNLFLNKLK 107
>gi|309789713|ref|ZP_07684293.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
gi|308228199|gb|EFO81847.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
Length = 150
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCN 100
R GF V K+ G AV+RNR +RRL+E +RL + G+D VL+ + D + +PF L
Sbjct: 71 RCGFVVAKQIGGAVQRNRAKRRLREVMRLALPQITP-GYDLVLVVRSADVIEMPFITLQT 129
Query: 101 HFVERVRRNK 110
E +RR +
Sbjct: 130 AVEELLRRAQ 139
>gi|163740290|ref|ZP_02147684.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
gi|161386148|gb|EDQ10523.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
Length = 122
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCN 100
R+GFT +KK G AV RNR +RRL+E R+ + G DYVLI + + PF +L N
Sbjct: 51 RMGFTCSKKVGNAVSRNRAKRRLREVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKN 110
Query: 101 HFV 103
+
Sbjct: 111 DLI 113
>gi|254419734|ref|ZP_05033458.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
gi|196185911|gb|EDX80887.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
Length = 134
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 1 MSNICILKK---RRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAV 55
MS+ +K+ R QF KG E R G ++ L + + VGFT T+K G AV
Sbjct: 1 MSDPLQIKRLLRRPQFLAAAKGVSEARGG--VVIQRLERGDGSPHIGVGFTATRKIGGAV 58
Query: 56 ERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAK 87
RNR +RRL+EA R L G+ G DYV IA+
Sbjct: 59 VRNRAKRRLREAARAMLPVHGL--PGSDYVFIAR 90
>gi|209886639|ref|YP_002290496.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
gi|209874835|gb|ACI94631.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
Length = 132
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKKR F +G P F ++ ++ R+GFTV+KK G A ERNR+RRRL++
Sbjct: 4 LKKRADFLAAAQGPRAARPAFVVQARLRDDPGPT-RIGFTVSKKVGTATERNRVRRRLRD 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VR G DYV++ +R+AL F+ L F
Sbjct: 63 MVRQAGLGTAPSPRDYVIVGRRNALNREFQVLIADF 98
>gi|328952577|ref|YP_004369911.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
gi|328452901|gb|AEB08730.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
Length = 125
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F VK+ G R+ P F + + +N+ PR+G VTK+ G AV+RNR++R L+
Sbjct: 18 LLKRAEFQRVKQVGSRRRSPHFVISLADNDLQR--PRLGVVVTKRLGKAVQRNRVKRLLR 75
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E R +G+L D V+IAK A + E+
Sbjct: 76 EFFRR-HKGILPP-QDIVIIAKPGAPGLTSAEVAAEL 110
>gi|289422480|ref|ZP_06424323.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
gi|289157052|gb|EFD05674.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
Length = 117
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+G +++KK G A RN++RR +KEA RL + +K G+DY+ IA+
Sbjct: 47 RIGISISKKVGKAHVRNKLRRYIKEAYRLNIDPYVKGGYDYIFIAR 92
>gi|164686448|ref|ZP_02210476.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
gi|164604459|gb|EDQ97924.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
Length = 114
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
RVG +V+KK G A+ RN+++RR++E+ RL + +K G+D V IA+
Sbjct: 43 RVGISVSKKVGKAIVRNKVKRRIRESFRLDVDKKIKSGYDIVFIAR 88
>gi|39933710|ref|NP_945986.1| ribonuclease P protein component [Rhodopseudomonas palustris
CGA009]
gi|192289067|ref|YP_001989672.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
gi|39647557|emb|CAE26077.1| probable ribonuclease p protein component (protein c5)
[Rhodopseudomonas palustris CGA009]
gi|192282816|gb|ACE99196.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
Length = 113
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G GP F L+ L + + RVGFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFIAVAGGLRINGPAFVLQSLRREDQGPI-RVGFTVTKKIGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF---VERVRR 108
V+ G L DYVL+ +R AL F + +ERV R
Sbjct: 63 LVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERVAR 107
>gi|312964015|ref|ZP_07778486.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
gi|311282050|gb|EFQ60660.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
Length = 134
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L + ++ G D V++A++ + EL HF + +R R++ S ++
Sbjct: 75 LHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTHKPAPAVSTET 126
>gi|158321894|ref|YP_001514401.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
gi|166991074|sp|A8MKS3|RNPA_ALKOO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158142093|gb|ABW20405.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
Length = 114
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVGFTV+KK G +V R+R++R L E+ RL E V K G+D + +A+ + +KE+
Sbjct: 41 RVGFTVSKKVGKSVIRSRVKRLLNESYRLNNEKV-KQGYDIIFVARNTCVDASYKEI 96
>gi|56965877|ref|YP_177611.1| ribonuclease P [Bacillus clausii KSM-K16]
gi|60390295|sp|Q5WAG0|RNPA_BACSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56912123|dbj|BAD66651.1| ribonuclease P protein component [Bacillus clausii KSM-K16]
Length = 122
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK R+F+ V KKG F L VL + L R+G +V+K+ G AV RNR++R ++
Sbjct: 7 IKKNREFSAVFKKGSSMANRQFVLYVLPKEGQDRL-RLGLSVSKRVGNAVCRNRIKRLVR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
A EG L+ DYV+IA+ A + FKE+
Sbjct: 66 AAFHEL-EGQLRPDCDYVVIARNPARDLSFKEV 97
>gi|317131006|ref|YP_004097288.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
gi|315475954|gb|ADU32557.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
Length = 121
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
LPR+G +V+KK G AVERNR++R ++EA+R + K D V+IA++ +
Sbjct: 40 LPRIGLSVSKKIGNAVERNRIKRLMREALREVLPHI-KENVDIVIIARKPVI 90
>gi|85374956|ref|YP_459018.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
gi|122543775|sp|Q2N7X0|RNPA_ERYLH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84788039|gb|ABC64221.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
Length = 121
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+++KR F +G P F L L + N R G TVTKK G AV RNRM+RR
Sbjct: 6 AVIRKRADFLAANRGLRVARPGFVL--LAHPNQGQGQRYGITVTKKIGNAVVRNRMKRRF 63
Query: 65 KEAVRLCAEGVLKHG---HDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+E L E + + G HD++LI + + F +L + +RR +
Sbjct: 64 RE---LLWELLPQQGLADHDHILIGREGGIERDFGKLREELMLALRRAR 109
>gi|146337897|ref|YP_001202945.1| ribonuclease P protein component [Bradyrhizobium sp. ORS278]
gi|146190703|emb|CAL74707.1| Ribonuclease P protein component (RNaseP protein) (Protein C5)
[Bradyrhizobium sp. ORS278]
Length = 135
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G P F ++ + + R+GFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFLAVADGVRANSPAFVVQRRERGDQGPV-RIGFTVTKKNGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
V+ ++ DYVL+ +RDAL F+ + + +RR R
Sbjct: 63 LVKRLDPLTMRPHSDYVLVGRRDALSRDFQTMLDDLTTALRRLDRP 108
>gi|254293248|ref|YP_003059271.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
gi|254041779|gb|ACT58574.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
Length = 167
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 29/109 (26%)
Query: 7 LKKRRQFALVKKG--ELRKG------PFFSLEV------LNNNNSN------LLPRV--- 43
L+ RR F V KG E R+ P SL+V + NN N + P++
Sbjct: 17 LRVRRAFLFVAKGYAERRRSVVVQARPRLSLQVDSVTNPPSQNNINTPVNKLISPKIAGA 76
Query: 44 GFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH---DYVLIAKRD 89
GFT TKK G AV RNR +RRL+EA ++ + KH DYV IA+RD
Sbjct: 77 GFTATKKIGGAVVRNRAKRRLREA---SSQLMYKHALADVDYVFIARRD 122
>gi|146309635|ref|YP_001190100.1| ribonuclease P [Pseudomonas mendocina ymp]
gi|254808082|sp|A4Y1A2|RNPA_PSEMY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145577836|gb|ABP87368.1| ribonuclease P protein component [Pseudomonas mendocina ymp]
Length = 134
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF V K P S+ +L +N PR+G + KK AVERNR++R+++E+ R
Sbjct: 16 RQFKAVFDSPSGKAPGKSVLLLARDNQLDHPRLGLVIGKKSVKLAVERNRIKRQIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L + ++ G D V++A++ + EL F + +R RS S
Sbjct: 76 LNQDNLV--GWDIVVVARKGLGDLENGELAQQFGKLWKRLARSRPS 119
>gi|225181148|ref|ZP_03734594.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT
1]
gi|225168117|gb|EEG76922.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT
1]
Length = 112
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
NN N N R GF +KK G AV RNR++R L+E ++ A L G+D V +A+R A
Sbjct: 35 NNANGN---RTGFITSKKIGNAVIRNRVKRLLRETYKMYAAD-LATGYDLVFVARRPAAG 90
Query: 93 IPFKELC 99
FK+
Sbjct: 91 FDFKQAA 97
>gi|294501990|ref|YP_003565690.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|295707341|ref|YP_003600416.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
gi|294351927|gb|ADE72256.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|294805000|gb|ADF42066.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
Length = 117
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F V KKG+ F L VL+ + RVGF+V KK G AV RNR+ +RL
Sbjct: 7 IKKNDEFQTVFKKGKSVANRQFVLYVLDKPDQEHF-RVGFSVGKKIGNAVTRNRV-KRLA 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ + LK DY++IA++ A + ++E+ + +R K
Sbjct: 65 KQIMFEFTPYLKQDKDYIVIARQPAATMSYEEIKSSLQHVFKRGK 109
>gi|187777369|ref|ZP_02993842.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
gi|187774297|gb|EDU38099.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
Length = 111
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+ R+G +V+KK G +V RNR++R +KE+ RL + +K G+D V IA+ + +K++
Sbjct: 38 INRLGVSVSKKVGKSVIRNRVKRLIKESYRLNLDENMKKGYDLVFIARNSSNDKDYKDIE 97
Query: 100 NHFV 103
N +
Sbjct: 98 NALI 101
>gi|170761125|ref|YP_001788989.1| ribonuclease P [Clostridium botulinum A3 str. Loch Maree]
gi|238688510|sp|B1KUB6|RNPA_CLOBM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169408114|gb|ACA56525.1| ribonuclease P protein component [Clostridium botulinum A3 str.
Loch Maree]
Length = 111
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ R+G +V+KK G +V RNR++R +KE+ RL + +K G+D V IA+ + +K++
Sbjct: 38 INRLGVSVSKKVGKSVTRNRVKRLIKESYRLNLDKDMKQGYDLVFIARNSSNDKDYKDI 96
>gi|260437687|ref|ZP_05791503.1| ribonuclease P protein component [Butyrivibrio crossotus DSM
2876]
gi|292809913|gb|EFF69118.1| ribonuclease P protein component [Butyrivibrio crossotus DSM
2876]
Length = 112
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K G + + VL N NL R+G +V+KK G ++ R+R+ R ++E+VRL + +L
Sbjct: 18 KNGVSYANKYLVMYVLENRTDNL--RLGISVSKKVGNSIVRHRLTRLIRESVRLNSGSIL 75
Query: 77 KHGHDYVLIAK 87
K G+D V+IA+
Sbjct: 76 K-GYDIVIIAR 85
>gi|298290372|ref|YP_003692311.1| ribonuclease P protein component [Starkeya novella DSM 506]
gi|296926883|gb|ADH87692.1| ribonuclease P protein component [Starkeya novella DSM 506]
Length = 133
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ + PR+G TVTKK G AVERNR+RRRL+ AVR K G DYV++A+R AL
Sbjct: 30 DRADDTAPRIGLTVTKKHGNAVERNRIRRRLRAAVRDALPRAGKDGFDYVIVARRAALGT 89
Query: 94 PFKELCNHFVERVRRNKRSYYSGK 117
PF +L V+ + R +SG+
Sbjct: 90 PFADL----VKDIERGIARLHSGR 109
>gi|322381371|ref|ZP_08055374.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154947|gb|EFX47218.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 116
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +++KK G AV RNR+RR +KE VRL + + G+DY++I ++ + +KEL
Sbjct: 42 RLGLSISKKVGNAVVRNRLRRVIKEIVRLNIDRITG-GYDYIIIVRKPCAEMNYKEL 97
>gi|307294064|ref|ZP_07573908.1| ribonuclease P protein component [Sphingobium chlorophenolicum
L-1]
gi|306880215|gb|EFN11432.1| ribonuclease P protein component [Sphingobium chlorophenolicum
L-1]
Length = 139
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ KR F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 1 MGKRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRV 60
Query: 67 AVR--LCAEGVLKHGHDYVLIAKRDAL 91
R L GV G D+VLI + + +
Sbjct: 61 LARELLPVHGVA--GADHVLIGRSEGI 85
>gi|316932101|ref|YP_004107083.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
gi|315599815|gb|ADU42350.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
Length = 113
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G GP F L+ L + + RVGFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFIAVAGGLRINGPAFVLQSLRREDQGPI-RVGFTVTKKIGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
V+ G L DYVL+ +R AL F + + R R
Sbjct: 63 LVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERAAR 107
>gi|94495883|ref|ZP_01302462.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
gi|94424575|gb|EAT09597.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
Length = 190
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
I+ +R F +G P F L V + + R G TVTKK G AV RNRM+RR
Sbjct: 58 AIMVRRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRF 117
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK 87
+ R + G D+VLI +
Sbjct: 118 RVLARELLPALGIAGADHVLIGR 140
>gi|254476732|ref|ZP_05090118.1| ribonuclease P [Ruegeria sp. R11]
gi|214030975|gb|EEB71810.1| ribonuclease P [Ruegeria sp. R11]
Length = 151
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCN 100
R+GFT +KK G AV RNR +RRL+E R+ + G DYVLI + PF+EL
Sbjct: 80 RMGFTCSKKVGNAVARNRAKRRLREVARMILPLHGRAGWDYVLIGRAGQTADRPFEELKR 139
Query: 101 HFV 103
+
Sbjct: 140 DLI 142
>gi|77461962|ref|YP_351469.1| ribonuclease P [Pseudomonas fluorescens Pf0-1]
gi|123602664|sp|Q3K426|RNPA_PSEPF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77385965|gb|ABA77478.1| ribonuclease P protein component [Pseudomonas fluorescens Pf0-1]
Length = 133
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF---VERVRRNK 110
L + ++ G D V++A++ + EL HF +R+ RNK
Sbjct: 75 LHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNK 116
>gi|332186232|ref|ZP_08387977.1| ribonuclease P protein component [Sphingomonas sp. S17]
gi|332013600|gb|EGI55660.1| ribonuclease P protein component [Sphingomonas sp. S17]
Length = 113
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
RVGFTVTKK G AV RNRM+RR++ R L +G+ G D+VLI ++ + ++ L
Sbjct: 2 RVGFTVTKKIGNAVVRNRMKRRMRALARDLLPTKGIT--GADHVLIGRQGGIERDYQALT 59
Query: 100 NHFVERVRRNKRSYYSGKNFSRKS 123
+ + R + R+
Sbjct: 60 AELAKALARAASPETAADQRPREP 83
>gi|306821797|ref|ZP_07455392.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550164|gb|EFM38160.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 108
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 6 ILKKRRQFALVKKGELRKGPFFS---LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
++KK +QF + +G F+ L V NS+ ++G +++KK G AV RNR+RR
Sbjct: 5 MIKKDKQFRYI----YSRGKSFANKKLVVYYIKNSDEKLKIGISISKKVGKAVVRNRLRR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVER 105
+KE +RL +K G+ + +A+ A + F+ + NH ++R
Sbjct: 61 LIKENIRLSTN--IKTGYSMIFLARVGADDLDFQTMRSSINHLLKR 104
>gi|163733762|ref|ZP_02141204.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
gi|161392873|gb|EDQ17200.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
Length = 137
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S RVGFT +KK G AV RNR
Sbjct: 23 SGLTRITKRSDFLRAARAPRVVTPGFILQMRKRTPSEAEGIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+RRL+E RL + G DYV I +
Sbjct: 83 KRRLREIARLTLTDHGQQGVDYVFIGR 109
>gi|317126739|ref|YP_004100851.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
gi|315590827|gb|ADU50124.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
Length = 90
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+ L PRVGF V+K G AV RN +RRL+ AV G+ G D V+ A A ++
Sbjct: 10 AELPPRVGFVVSKAVGNAVTRNLTKRRLRAAVATQLSGI-PLGVDVVVRANPSAALASYQ 68
Query: 97 ELCNHFVERVRRNKRS 112
EL + ++ R RS
Sbjct: 69 ELADSIALQLDRVCRS 84
>gi|158425678|ref|YP_001526970.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
gi|158332567|dbj|BAF90052.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
Length = 136
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KRR F + E P F L+ + ++ PR+GFTVTKK G AV RNRMRRRL+E
Sbjct: 11 LRKRRDFLAAARAERANVPSFLLQGRDRHD-EAEPRLGFTVTKKNGNAVVRNRMRRRLRE 69
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A RL + + G DYVL+A+ L PF+ L V R
Sbjct: 70 AARLVMPQLGRSGFDYVLVARGPCLDAPFQTLVRDMERAVSR 111
>gi|86747810|ref|YP_484306.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
gi|86570838|gb|ABD05395.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
Length = 113
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G GP F L+ ++ + RVGFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFLAVANGRRISGPAFVLQGRRRDDPGPV-RVGFTVTKKIGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V+ G++ DYVL+ +R AL F +
Sbjct: 63 LVKRADRGLMLPNSDYVLVGRRAALSRDFAVMLGDL 98
>gi|251800248|ref|YP_003014979.1| ribonuclease P [Paenibacillus sp. JDR-2]
gi|247547874|gb|ACT04893.1| ribonuclease P protein component [Paenibacillus sp. JDR-2]
Length = 117
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G + +KK G AV RNRMRR +KE VRL E ++ + D++LI ++ A+ + K+L
Sbjct: 42 RLGVSASKKIGNAVVRNRMRRVIKEIVRLNGEKIVPN-TDFILIVRKPAVEMESKQL 97
>gi|157694478|ref|YP_001488940.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194016429|ref|ZP_03055043.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
gi|166991075|sp|A8FJG3|RNPA_BACP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157683236|gb|ABV64380.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194011902|gb|EDW21470.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
Length = 119
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK +F V KKG+ F + L+ N + L R+G +V+KK G AV RNR++R ++
Sbjct: 7 LKKNEEFQKVFKKGQSMANRQFVIYQLDQPNQDEL-RLGLSVSKKIGNAVMRNRIKRLIR 65
Query: 66 EAVRLCAEG-VLKHGHDYVLIAKRDALFIPFKE 97
+ EG LK DY++IA++ A + F+E
Sbjct: 66 QV--FLEEGHKLKQEKDYIVIARKPASELTFEE 96
>gi|152990626|ref|YP_001356348.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
gi|166226729|sp|A6Q3D2|RNPA_NITSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151422487|dbj|BAF69991.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
Length = 109
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK +R+F V K+G P+F L + + + R+GF +KK G AV+RNR
Sbjct: 1 MKGVQTLKTKREFDYVYKRGIAFHSPYFVLFYIPDKDM----RIGFVASKKVGKAVQRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNK 110
+R LK A+ + L G YV +AK L FK + +ER++R K
Sbjct: 57 AKRVLK-ALFIQYFDQLPIGR-YVFVAKPKLLGADFKRIDQEMTKILERIKRRK 108
>gi|284047384|ref|YP_003397724.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
gi|283951605|gb|ADB54349.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
Length = 132
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
PR+G +V++K G AVERN ++R L+EA + G L GHD V++A+ +A + +E
Sbjct: 51 PRLGVSVSRKVGGAVERNHVKRLLREAFEQESRG-LPDGHDVVVVARPEARAVAERE 106
>gi|91974550|ref|YP_567209.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
gi|91681006|gb|ABE37308.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G GP F L+ ++ + RVGFTVTKK G A ERNR+RRR++E
Sbjct: 133 LRQRADFIAVAGGLRISGPAFVLQGRRRDDEGPV-RVGFTVTKKIGTATERNRIRRRMRE 191
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDAL 91
V+ + DYVL+ +R AL
Sbjct: 192 LVKRADRSFMLPNSDYVLVGRRAAL 216
>gi|149202701|ref|ZP_01879673.1| ribonuclease P protein component [Roseovarius sp. TM1035]
gi|149143983|gb|EDM32017.1| ribonuclease P protein component [Roseovarius sp. TM1035]
Length = 109
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+L+KR F + + ++ + + + RVGFT +KK G AV RNR +RRL+
Sbjct: 1 MLRKRADFLAAARARRQGTGSMLVQGRDRRDGDTAIRVGFTCSKKVGNAVARNRAKRRLR 60
Query: 66 EAVR--LCAEGVLKHGHDYVLIAK 87
R L A+G+ G DYVLI K
Sbjct: 61 ALARELLPAQGL--PGWDYVLIGK 82
>gi|307721587|ref|YP_003892727.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
gi|306979680|gb|ADN09715.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
Length = 103
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+VGFT TKK G AV+RNR +RRL+ A+ K G YV +AK PF++L N
Sbjct: 34 KVGFTATKKLGNAVKRNRAKRRLR-ALFCEYSDSFKDG-TYVFVAKAAIFDAPFEKLTND 91
Query: 102 FVERVRRNK 110
F + + R K
Sbjct: 92 FNKVLSRAK 100
>gi|323705847|ref|ZP_08117419.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534843|gb|EGB24622.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 125
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+ RVGF+++KK G +V RNR +R L E RL +G LK G+D + IA+ + F L
Sbjct: 49 VNRVGFSISKKIGKSVVRNRYKRLLYENFRLL-DGDLKKGYDIIFIARNKIVESDFYTLG 107
Query: 100 N 100
N
Sbjct: 108 N 108
>gi|148556517|ref|YP_001264099.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
gi|148501707|gb|ABQ69961.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
Length = 106
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+L++R F G P F L V +++ + R+G TVTKK G AV RNR++RR +
Sbjct: 1 MLQRRADFLAANGGRRAPMPGFVLLVRPRGDNDPVMRLGITVTKKIGNAVVRNRVKRRFR 60
Query: 66 EAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R L G+ G D+VLI + + F +L
Sbjct: 61 ALARELLPVAGI--AGADHVLIGRAGGVERDFAQL 93
>gi|294010747|ref|YP_003544207.1| RNase P protein component [Sphingobium japonicum UT26S]
gi|292674077|dbj|BAI95595.1| RNase P protein component [Sphingobium japonicum UT26S]
Length = 136
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ +R F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 1 MSRRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRV 60
Query: 67 AVR--LCAEGVLKHGHDYVLIAKRDAL 91
R L GV G D+VLI + + +
Sbjct: 61 LARELLPVHGV--AGADHVLIGRSEGI 85
>gi|331268190|ref|YP_004394682.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
gi|329124740|gb|AEB74685.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
Length = 113
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++G+ L V NNN+ R+G +V+KK G +V R+R++R + E+ RL V
Sbjct: 18 RRGKSYSNGLLVLYVFKNNNNVDKSRIGISVSKKVGNSVVRSRVKRLISESYRLNNTNV- 76
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G+D V +A+ ++ F E+ + + ++R
Sbjct: 77 KIGYDLVFVARVNSKDKSFSEIESSLINLLKR 108
>gi|205371914|ref|ZP_03224734.1| ribonuclease P [Bacillus coahuilensis m4-4]
Length = 118
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK R+F + KGE F + L + R+G +V+KK G AV RNR++R ++
Sbjct: 7 VKKNREFQEIFNKGESFANRQFVIYKLQTQGEDPY-RLGLSVSKKIGNAVVRNRIKRYIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR---DALFIPFKELCNHFVERV----RRNKRS 112
++ L + +K G+DYV+IA++ D F K H ++R R+ KRS
Sbjct: 66 QSF-LELKDEIKPGYDYVIIARKPAADFTFFETKSSLTHVMKRADVLKRKEKRS 118
>gi|295108625|emb|CBL22578.1| ribonuclease P protein component [Ruminococcus obeum A2-162]
Length = 120
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V K+G + + + VL N ++ R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNRDFQQVYKRGTSKANRYLVMYVLPN--QHMKNRLGISVSKKVGNSVVRHRITRLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E+ RL E + K D V+IA+ A + E+ F++ R+
Sbjct: 65 ESYRLN-ESLFKKNLDIVVIARNSANGTNYHEIEKAFMDLARK 106
>gi|310816964|ref|YP_003964928.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
gi|308755699|gb|ADO43628.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
Length = 142
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNR 59
S + I+ +RR F L + + F L+ + RVGFT +KK G AV R
Sbjct: 21 SGLAIITQRRDFLLAARAFRQGTTGFHLQARKREAGEDIAGIRVGFTCSKKVGNAVARGH 80
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+RRL+E R G DYVL+ +
Sbjct: 81 AKRRLREVARAVLPVAGLEGWDYVLVGR 108
>gi|126724916|ref|ZP_01740759.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
gi|126706080|gb|EBA05170.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
Length = 136
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L R+G+T +KK G AV RNR +RRL+E RL G DYVLI +
Sbjct: 61 LIRIGYTCSKKVGNAVARNRAKRRLREIARLVIPHHGNPGWDYVLIGR 108
>gi|296283116|ref|ZP_06861114.1| ribonuclease P protein component [Citromicrobium bathyomarinum
JL354]
Length = 128
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+++ +L R F +G F L V N + R G TVTKK G AV RNRM
Sbjct: 5 VTSQDVLTARADFLAANRGLRVPARGFVLLVRPNEGRGM--RYGITVTKKIGNAVVRNRM 62
Query: 61 RRRLKEAVRLCAEGVLKHG---HDYVLIAKRDALFIPFKELCNHFV 103
+RR +E L + +HG HD+VLI + + F +L + V
Sbjct: 63 KRRFRE---LLWAHLPEHGLPDHDHVLIGRDGGVERDFAKLSSELV 105
>gi|253573860|ref|ZP_04851202.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846337|gb|EES74343.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
Length = 116
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G + +KK G AV RNRMRR LKE VRL + H D +LI + A+ + +K+L
Sbjct: 42 RLGVSASKKIGNAVVRNRMRRMLKEIVRLHEAEIRDHV-DLILIVRNGAVGMEYKDL 97
>gi|163739497|ref|ZP_02146907.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
gi|161387250|gb|EDQ11609.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
Length = 150
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCN 100
R+GFT +KK G AV RNR +RRL+ R+ + G DYVLI + + PF +L N
Sbjct: 79 RMGFTCSKKVGNAVARNRAKRRLRGVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKN 138
Query: 101 HFV 103
+
Sbjct: 139 DLI 141
>gi|311032254|ref|ZP_07710344.1| ribonuclease P [Bacillus sp. m3-13]
Length = 117
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F V +KG+ F + + ++ L R+G +V+KK G AV RNR++R ++
Sbjct: 7 IKKNKEFQHVFQKGKSMANRQFVIYAVQKSDQPLF-RIGLSVSKKIGNAVTRNRIKRLVR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+AV E L G D V+IA++ A + F+E+
Sbjct: 66 QAVHEIKEQ-LPGGVDIVVIARKPAADMSFEEV 97
>gi|229593498|ref|YP_002875617.1| ribonuclease P [Pseudomonas fluorescens SBW25]
gi|229365364|emb|CAY53751.1| ribonuclease P protein component [Pseudomonas fluorescens SBW25]
Length = 134
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L + ++ G D V++A++ + EL HF + +R R+ S ++
Sbjct: 75 LHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTNKPAPAVSTET 126
>gi|291165951|gb|EFE27998.1| ribonuclease P protein component [Filifactor alocis ATCC 35896]
Length = 112
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKEL 98
RVGF+++KK G AV RN+ RRRLKE +R A K G+D + I + ++A + ++
Sbjct: 44 RVGFSISKKFGKAVYRNKARRRLKEILR--ASSCKKQGYDMIFIVRPGAKEADYATLEKS 101
Query: 99 CNHFVERV 106
H ++
Sbjct: 102 VTHLFQKT 109
>gi|84497196|ref|ZP_00996018.1| ribonuclease P protein [Janibacter sp. HTCC2649]
gi|84382084|gb|EAP97966.1| ribonuclease P protein [Janibacter sp. HTCC2649]
Length = 90
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+ ++ + PRVGF V+K G AV RNR +RRL+ A+ G+ G D V+ A+ A
Sbjct: 6 VTDSRAGFPPRVGFVVSKAVGNAVVRNRTKRRLRAAIATELTGI-PTGLDVVVRAQPAAA 64
Query: 92 FIPFKELCNHF 102
F EL
Sbjct: 65 SATFAELSESL 75
>gi|254463010|ref|ZP_05076426.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2083]
gi|206679599|gb|EDZ44086.1| ribonuclease P protein component [Rhodobacteraceae bacterium
HTCC2083]
Length = 88
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDA 90
VGFT +KK G AV RNR +RRL+EA R L GV+ G DYVLI + +A
Sbjct: 17 VGFTCSKKVGNAVARNRAKRRLREAARVVLPLHGVI--GCDYVLIGRAEA 64
>gi|299132592|ref|ZP_07025787.1| ribonuclease P protein component [Afipia sp. 1NLS2]
gi|298592729|gb|EFI52929.1| ribonuclease P protein component [Afipia sp. 1NLS2]
Length = 125
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKKR F +G P F ++ +++ R+GFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LKKRADFIAAAQGPRIARPAFVVQSRLRDDTGPT-RIGFTVTKKVGTATERNRVRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VRL D+V++ +R AL F + F
Sbjct: 63 MVRLAGVIAPPSPRDHVIVGRRAALDHEFSVMIEDF 98
>gi|260887482|ref|ZP_05898745.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|330840120|ref|YP_004414700.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|260862769|gb|EEX77269.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|329747884|gb|AEC01241.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
Length = 128
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
ILKK++ F A+ +G+ F L V ++ L +VGF KK G AV+RNR++R L
Sbjct: 9 ILKKKKDFQAVYSRGKSYANRFLVLYVFRSHG--LQGKVGFAAGKKLGNAVKRNRVKRLL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+E+ RL + ++ G +L+ ++ AL + ++L F+ R K +G N + KS
Sbjct: 67 RESYRLH-QVEIEEGFSLLLVGRKAALDVKCQDLEKAFLALGR--KAEIMAGDNEASKS 122
>gi|90422338|ref|YP_530708.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
gi|90104352|gb|ABD86389.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
Length = 95
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P F L+ + ++ + RVGFTVTKK G A ERNR+RRRL+E V+ ++ DYVL
Sbjct: 4 PAFVLQGRDRDDDGPI-RVGFTVTKKIGTATERNRIRRRLREVVKRVDGAAMRPHSDYVL 62
Query: 85 IAKRDALFIPFKELCNHF---VERVRRNKRS 112
+ +R AL F + + ++R+ R ++S
Sbjct: 63 VGRRAALDRGFSVMIDDLHVALDRIGRGRQS 93
>gi|260893981|ref|YP_003240078.1| ribonuclease P protein component [Ammonifex degensii KC4]
gi|260866122|gb|ACX53228.1| ribonuclease P protein component [Ammonifex degensii KC4]
Length = 110
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+GF V+KK AV++NR+RR L+E RL E + + G DYVL+ + A + E+
Sbjct: 41 RLGFAVSKKVKTAVKKNRVRRLLREVCRLNPE-LFRPGFDYVLLGREGAEESSYWEIEED 99
Query: 102 FVERVRRN 109
E +RR
Sbjct: 100 VREALRRG 107
>gi|304322172|ref|YP_003855815.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
gi|303301074|gb|ADM10673.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
Length = 112
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KRR F +++G P F L+V N+ S R+GFTVTKK G AV RNR++RRL+
Sbjct: 9 LTKRRDFLSLRRGRRINRPTFLLQVAPNDLSAT--RIGFTVTKKHGNAVRRNRLKRRLRA 66
Query: 67 AVRLCAEGVLKHGHDYVLIAK 87
AV + +K G+D IA+
Sbjct: 67 AVESLSSSSVKPGYDLNFIAR 87
>gi|110678775|ref|YP_681782.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
gi|109454891|gb|ABG31096.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
Length = 137
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S+ + RVGFT +KK G AV RNR
Sbjct: 23 SRLTQITKRADFLRAARAPRAVTPGFILQMRRRPASDAAVIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+RRL+E RL G DYV I +
Sbjct: 83 KRRLREIARLILPEKGLPGVDYVFIGR 109
>gi|15896969|ref|NP_350318.1| ribonuclease P [Clostridium acetobutylicum ATCC 824]
gi|21263956|sp|Q97CV8|RNPA_CLOAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15026845|gb|AAK81658.1|AE007868_14 RnpA, ribonuclease P protein component [Clostridium
acetobutylicum ATCC 824]
gi|325511146|gb|ADZ22782.1| ribonuclease P [Clostridium acetobutylicum EA 2018]
Length = 119
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 22 RKGPFFS-----LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
RKG FS L V N + R+G +V+KK G +V R+R++R + E+ RL + L
Sbjct: 17 RKGKSFSNRLLVLYVYKNYILKDINRIGISVSKKVGKSVVRSRVKRLIGESYRLNSSN-L 75
Query: 77 KHGHDYVLIAK 87
K GHD+V+IA+
Sbjct: 76 KKGHDFVIIAR 86
>gi|227485755|ref|ZP_03916071.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
gi|227236310|gb|EEI86325.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
Length = 116
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F++ V +N+ N PR GFT++KK G A RN+++R+L+E R+ + +G D V+I
Sbjct: 28 FTVLVRDNDLKN--PRFGFTISKKIGKAHSRNQLKRKLREIARINYANL--NGVDIVIIP 83
Query: 87 KRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
K+ ++ L H + + R K+ +Y+
Sbjct: 84 KKHTTEFDYQRLKSSLGHALNQAFRKKKIFYA 115
>gi|299135921|ref|ZP_07029105.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
gi|298602045|gb|EFI58199.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
Length = 173
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
PR+G TV K G AV+RNR++RRL+EAVR A +L D +L KR + F L
Sbjct: 88 PRIGLTVPKALGKAVDRNRIKRRLREAVR-HALPLLTAPVDVILHPKRSVIDADFAVL 144
>gi|163119738|ref|YP_081442.3| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52005862|gb|AAU25804.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus licheniformis ATCC 14580]
Length = 119
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR++R ++
Sbjct: 7 LKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNRVKRLIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ ++ +LK +DY++IA++ A + ++E
Sbjct: 66 QVIQ-EERNLLKQENDYIIIARKPAAELSYEE 96
>gi|319648517|ref|ZP_08002733.1| RnpA protein [Bacillus sp. BT1B_CT2]
gi|317389596|gb|EFV70407.1| RnpA protein [Bacillus sp. BT1B_CT2]
Length = 123
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR++R ++
Sbjct: 11 LKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNRVKRLIR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ ++ +LK +DY++IA++ A + ++E
Sbjct: 70 QVIQ-EERNLLKQENDYIIIARKPAAELSYEE 100
>gi|323487689|ref|ZP_08092947.1| ribonuclease P [Planococcus donghaensis MPA1U2]
gi|323398423|gb|EGA91211.1| ribonuclease P [Planococcus donghaensis MPA1U2]
Length = 113
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F + KKG+ F + VL N RVG +V+KK G AV RNR++R ++
Sbjct: 7 IKKNKEFQHIFKKGKSFANRQFIVYVLKNEQPEF--RVGLSVSKKVGNAVARNRIKRYIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ + +L + DY++IA+ A + F E
Sbjct: 65 QTFLELKDDLLPNA-DYIIIARPQAATLDFHE 95
>gi|52788050|ref|YP_093879.1| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52350552|gb|AAU43186.1| RnpA [Bacillus licheniformis ATCC 14580]
Length = 134
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR++R ++
Sbjct: 22 LKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNRVKRLIR 80
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ ++ +LK +DY++IA++ A + ++E
Sbjct: 81 QVIQ-EERNLLKQENDYIIIARKPAAELSYEE 111
>gi|118443844|ref|YP_876975.1| ribonuclease P [Clostridium novyi NT]
gi|166226715|sp|A0PX73|RNPA_CLONN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118134300|gb|ABK61344.1| ribonuclease P protein component [Clostridium novyi NT]
Length = 113
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL-CAEGV 75
++G+ L V NNN+ RVG +V+KK G +V R+R++R + E+ RL C+
Sbjct: 18 RRGKSYSNSLLVLYVFKNNNNVDTSRVGISVSKKVGNSVVRSRVKRLISESYRLNCSN-- 75
Query: 76 LKHGHDYVLIAKRDALFIPFKEL 98
+K +D V +A+ + +KE+
Sbjct: 76 IKEKYDLVFVARNKSKDKTYKEI 98
>gi|148381584|ref|YP_001256125.1| ribonuclease P protein component [Clostridium botulinum A str.
ATCC 3502]
gi|153932824|ref|YP_001385961.1| ribonuclease P [Clostridium botulinum A str. ATCC 19397]
gi|153934757|ref|YP_001389368.1| ribonuclease P [Clostridium botulinum A str. Hall]
gi|153939463|ref|YP_001393003.1| ribonuclease P [Clostridium botulinum F str. Langeland]
gi|168181114|ref|ZP_02615778.1| ribonuclease P protein component [Clostridium botulinum NCTC
2916]
gi|170754447|ref|YP_001783282.1| ribonuclease P [Clostridium botulinum B1 str. Okra]
gi|226951099|ref|YP_002806190.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|166226712|sp|A7FPL5|RNPA_CLOB1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226713|sp|A5I820|RNPA_CLOBH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226714|sp|A7GJP3|RNPA_CLOBL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890165|sp|B1IHS3|RNPA_CLOBK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808060|sp|C1FP35|RNPA_CLOBJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148291068|emb|CAL85205.1| ribonuclease P protein component [Clostridium botulinum A str.
ATCC 3502]
gi|152928868|gb|ABS34368.1| ribonuclease P protein component [Clostridium botulinum A str.
ATCC 19397]
gi|152930671|gb|ABS36170.1| ribonuclease P protein component [Clostridium botulinum A str.
Hall]
gi|152935359|gb|ABS40857.1| ribonuclease P protein component [Clostridium botulinum F str.
Langeland]
gi|169119659|gb|ACA43495.1| ribonuclease P protein component [Clostridium botulinum B1 str.
Okra]
gi|182668109|gb|EDT80088.1| ribonuclease P protein component [Clostridium botulinum NCTC
2916]
gi|226841638|gb|ACO84304.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|322807971|emb|CBZ05546.1| ribonuclease P protein component [Clostridium botulinum H04402
065]
Length = 111
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ R+G +V+KK G +V RNR++R +KE+ RL + +K G+D V IA+ + +K++
Sbjct: 38 INRLGVSVSKKVGKSVIRNRVKRLIKESYRLNLDENMKKGYDLVFIARNSSNDRDYKDI 96
>gi|290968156|ref|ZP_06559701.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
gi|290781831|gb|EFD94414.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
Length = 118
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+K +++ LV + G+ + L V+ + S R+GF KK GCAVERNR RR +K
Sbjct: 10 LRKNKEYRLVYRYGKSYVNRYVVLYVMARS-SKQCTRMGFVTGKKIGCAVERNRCRRLMK 68
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E RL + L G D VLI + I F + +++ +V R
Sbjct: 69 EVYRLHRQE-LGSGFDLVLIGRSPLKNINFAQ-AEYYILKVLR 109
>gi|168183725|ref|ZP_02618389.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|237797104|ref|YP_002864656.1| ribonuclease P [Clostridium botulinum Ba4 str. 657]
gi|259494101|sp|C3KWJ9|RNPA_CLOB6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|182673212|gb|EDT85173.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|229263703|gb|ACQ54736.1| ribonuclease P protein component [Clostridium botulinum Ba4 str.
657]
Length = 111
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ R+G +V+KK G +V RN+++R +KE+ RL + +K G+D V IA+ + +K++
Sbjct: 38 INRLGVSVSKKVGKSVVRNKVKRLIKESYRLNLDKDMKRGYDLVFIARNSSNDKDYKDI 96
>gi|148258510|ref|YP_001243095.1| ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
gi|146410683|gb|ABQ39189.1| Ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
Length = 136
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F V G P F ++ + + R+GFTVTK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFLAVADGARANSPAFVVQRRERADQGPV-RIGFTVTKNNGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V+ ++ DYVLI +RDAL F+ + + +RR
Sbjct: 63 LVKRLDPLSMRPHSDYVLIGRRDALSRDFQTMLDDLQTTLRR 104
>gi|294085070|ref|YP_003551830.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664645|gb|ADE39746.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 117
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R G T TKK G AV RNR++RRL+ + + G DYVLI + F EL
Sbjct: 41 RYGLTATKKIGNAVTRNRVKRRLRVIAKQVLAPIAMSGVDYVLIGRATTATSSFDELVTE 100
Query: 102 FVERVR 107
+ +R
Sbjct: 101 VKKSLR 106
>gi|257067221|ref|YP_003153477.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
gi|256799101|gb|ACV29756.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
Length = 116
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
VL NN PR G T++KK G A +RN ++R+L+E +RL + +G D V+I K
Sbjct: 27 DFTVLIKNNGLNHPRFGITISKKIGKANQRNSLKRKLREILRLNYASI--NGVDIVIIPK 84
Query: 88 R---DALFIPFKELCNHFVERVRRNKRSYYS 115
+ D + K+ H + + + YY
Sbjct: 85 KHTTDFTYDKLKKSLGHVLSKAFKKNIVYYD 115
>gi|229015404|ref|ZP_04172410.1| Ribonuclease P protein component [Bacillus cereus AH1273]
gi|229026928|ref|ZP_04183251.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228734386|gb|EEL85057.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228745883|gb|EEL95879.1| Ribonuclease P protein component [Bacillus cereus AH1273]
Length = 119
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F A+ +KG+ F + LN R+G +V+KK G AV RNR++R ++
Sbjct: 11 IKKNDEFQAVFQKGQSNANRQFVVYQLNKEKQPYF-RIGLSVSKKIGNAVVRNRIKRMIR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+A+ + + + G D+V+IA++ + ++EL + +R+
Sbjct: 70 QAI-MELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRS 112
>gi|77464641|ref|YP_354145.1| ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332559534|ref|ZP_08413856.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
gi|77389059|gb|ABA80244.1| Ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332277246|gb|EGJ22561.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
Length = 137
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 29 ILRKRADFLRAAQARRQGTPGFLLQARRREAEGGI-RVGFTCSKKVGNAVLRNRAKRRLR 87
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
R G DYVL+ + A
Sbjct: 88 AIARAVLTVQGHAGWDYVLVGRPGA 112
>gi|253681259|ref|ZP_04862057.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
gi|253562497|gb|EES91948.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
Length = 113
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++G+ L V NNN+ R+G +V+KK G +V R+R++R + E+ RL V
Sbjct: 18 RRGKSYSNGLLVLYVFKNNNNLDKSRIGISVSKKVGNSVVRSRVKRLISESYRLNNTNV- 76
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G+D V +A+ ++ F E+ + + ++R
Sbjct: 77 KIGYDLVFVARVNSKDKRFSEIESSLINLLKR 108
>gi|304405891|ref|ZP_07387549.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
gi|304345134|gb|EFM10970.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
Length = 115
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G + +KK G AV RNRMRR +KE VRL AE + D +LI ++ A+ + KEL
Sbjct: 42 RLGVSASKKIGNAVIRNRMRRVVKEIVRLNAERIAPR-VDLILIVRKPAVDMKTKEL 97
>gi|330876351|gb|EGH10500.1| ribonuclease P [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 133
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|28872713|ref|NP_795332.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968443|ref|ZP_03396586.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|301384269|ref|ZP_07232687.1| ribonuclease P [Pseudomonas syringae pv. tomato Max13]
gi|302063881|ref|ZP_07255422.1| ribonuclease P [Pseudomonas syringae pv. tomato K40]
gi|302131964|ref|ZP_07257954.1| ribonuclease P [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|38258464|sp|Q87TR9|RNPA_PSESM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28855969|gb|AAO59027.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926731|gb|EEB60283.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|331017729|gb|EGH97785.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 133
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|153811983|ref|ZP_01964651.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
gi|149831882|gb|EDM86968.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
Length = 119
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V K+G + + + VL N +++ R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNRDFQQVYKRGTSKANRYLVMYVLPN--QHMMNRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
E+ RL E D V+IA+ A ++E+ + F+
Sbjct: 65 ESYRLNEEK-FDRNLDIVVIARNSAKDRSYQEIESAFM 101
>gi|146276127|ref|YP_001166286.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
gi|145554368|gb|ABP68981.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
Length = 137
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 29 ILRKRADFLRAAQARRQGTPGFLLQARRREAEGGI-RVGFTCSKKVGNAVMRNRAKRRLR 87
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALF 92
R G DYVL+ + A
Sbjct: 88 ALARELLTTRGHPGWDYVLVGRPGATI 114
>gi|88658516|ref|YP_507257.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
gi|88599973|gb|ABD45442.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
Length = 119
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKKQGCAVE 56
+ + +KKR+ F + G G L+V N L RVGFTV+KK G AV
Sbjct: 3 LKGVVTVKKRKCFLFARNNGTFVGGNGLFLQVAKEPNGLLEDGCVRVGFTVSKKVGKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLK----HGHDYVLIAKRDALFIPFKEL 98
RN+++RR R+ A+ VL G+ Y+LI R + FKE+
Sbjct: 63 RNKVKRRF----RVLAQSVLVKYAIKGYYYILIGNRYTPKVNFKEM 104
>gi|332983467|ref|YP_004464908.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
gi|332701145|gb|AEE98086.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
Length = 118
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
N SN+ R GF+V+KK G +V RNR+RR +KEA RL + K G+D + IA+
Sbjct: 38 NKQSNV--RAGFSVSKKIGKSVVRNRVRRLIKEAFRLHINDI-KPGYDLIFIAR 88
>gi|118582024|ref|YP_903274.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
gi|118504734|gb|ABL01217.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
Length = 135
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
++ +N + LPR+G T +KK GCAV RNR++R ++E R C L D +IA+R++
Sbjct: 47 IVWQDNGHDLPRLGITASKKTGCAVVRNRIKRFVRETFR-CNRRTLPP-VDMNVIARRES 104
Query: 91 LFIPFK 96
+ F+
Sbjct: 105 AAMDFR 110
>gi|317014861|gb|ADU82297.1| ribonuclease P protein component [Helicobacter pylori Gambia94/24]
Length = 161
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + N L +G +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
V+KK G AV+RN ++RRL+ V L G V + K D + F L HF+E
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--TRHAALCQGLTLVFVPKSDCYHLDFWALEKHFLE 134
>gi|161486725|ref|YP_238201.2| ribonuclease P [Pseudomonas syringae pv. syringae B728a]
gi|257485601|ref|ZP_05639642.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289628216|ref|ZP_06461170.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289649106|ref|ZP_06480449.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 2250]
gi|289677546|ref|ZP_06498436.1| ribonuclease P [Pseudomonas syringae pv. syringae FF5]
gi|298484607|ref|ZP_07002712.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|302185838|ref|ZP_07262511.1| ribonuclease P [Pseudomonas syringae pv. syringae 642]
gi|298160864|gb|EFI01880.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320321686|gb|EFW77785.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. B076]
gi|320331112|gb|EFW87083.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
gi|330870073|gb|EGH04782.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330890252|gb|EGH22913.1| ribonuclease P [Pseudomonas syringae pv. mori str. 301020]
gi|330898609|gb|EGH30028.1| ribonuclease P [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330937302|gb|EGH41310.1| ribonuclease P [Pseudomonas syringae pv. pisi str. 1704B]
gi|330952336|gb|EGH52596.1| ribonuclease P [Pseudomonas syringae Cit 7]
gi|330970323|gb|EGH70389.1| ribonuclease P [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330976400|gb|EGH76457.1| ribonuclease P [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330987017|gb|EGH85120.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011889|gb|EGH91945.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 133
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|330881910|gb|EGH16059.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
Length = 133
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|221640553|ref|YP_002526815.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
gi|221161334|gb|ACM02314.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
Length = 137
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 29 ILRKRADFLRAAQARRQGTPGFLLQARRREAEGGI-RVGFTCSKKVGNAVLRNRAKRRLR 87
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
R G DYVL+ + A
Sbjct: 88 AIARAVLTLQGHAGWDYVLVGRPGA 112
>gi|126463481|ref|YP_001044595.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
gi|126105145|gb|ABN77823.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
Length = 137
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 29 ILRKRADFLRAAQARRQGTPGFLLQARRREAEGGI-RVGFTCSKKVGNAVLRNRAKRRLR 87
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
R G DYVL+ + A
Sbjct: 88 AIARAVLTLQGHAGWDYVLVGRPGA 112
>gi|295697835|ref|YP_003591073.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
gi|295413437|gb|ADG07929.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
Length = 134
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R GF+V+KK G AV RN+++RRL+EAV E L G D V+IA+ F++L
Sbjct: 42 RAGFSVSKKVGGAVVRNKVKRRLREAVWGQGE-RLPTGWDLVVIARPGCDGASFEQL 97
>gi|308273507|emb|CBX30109.1| Ribonuclease P protein component [uncultured Desulfobacterium sp.]
Length = 113
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
ILK+R + L KKG K + + V+ + S R+G TVTKK G +V+RNR++R ++
Sbjct: 14 ILKRREFYELSKKGNRIKNKYVT--VIYSPGSTEKCRLGLTVTKKIGNSVQRNRIKRYIR 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
E R+ + K+ D +I K +A + F+
Sbjct: 72 EFFRV-NKSRFKNNWDINVIPKSEAANLTFE 101
>gi|330961503|gb|EGH61763.1| ribonuclease P [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 133
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|300087855|ref|YP_003758377.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527588|gb|ADJ26056.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 95
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
N + L R GF V++K G AV RN +RRRLKE +R L G+D V IA++ + +
Sbjct: 19 NGSSLNRYGFVVSRKVGGAVVRNMVRRRLKEIIRGQN---LMPGYDIVFIARQTSARATY 75
Query: 96 KEL 98
+L
Sbjct: 76 AQL 78
>gi|126651993|ref|ZP_01724185.1| ribonuclease P [Bacillus sp. B14905]
gi|126591262|gb|EAZ85371.1| ribonuclease P [Bacillus sp. B14905]
Length = 117
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV+RN+++R ++ ++ L + LK DYV+IA++ A + F E+
Sbjct: 45 RVGLSVSKKLGNAVKRNQIKRYIRHSI-LDLKDDLKTNMDYVIIARQPAATMDFHEV 100
>gi|63259067|gb|AAY40163.1| ribonuclease P protein [Pseudomonas syringae pv. syringae B728a]
Length = 123
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 5 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 64
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 65 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 105
>gi|225873714|ref|YP_002755173.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
gi|225792901|gb|ACO32991.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
Length = 160
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
S +PRVG T + G AVERNR++RR++EAVR + +L D VL ++ + + F
Sbjct: 47 SAAIPRVGLTAGRVMGKAVERNRIKRRMREAVREHLQ-LLPGCVDVVLHPRKSVMTMEFT 105
Query: 97 ELCNHFVE 104
L E
Sbjct: 106 ALSREVAE 113
>gi|32474816|ref|NP_867810.1| ribonuclease P protein component [Rhodopirellula baltica SH 1]
gi|48474354|sp|Q7UNR1|RNPA_RHOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|32445356|emb|CAD75357.1| probable ribonuclease P protein component [Rhodopirellula baltica
SH 1]
Length = 146
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G T+ KK G AV RNR +R ++EA RL + L G DYV+ K+D + +K +
Sbjct: 66 RLGVTIPKKTGNAVVRNRWKRLIREAFRL-NQTQLPSGFDYVVRPKKD-VTADWKMIEKG 123
Query: 102 FVERVRRN-KRSYYSGKNFSRKS 123
FV+ V R +RS S S +S
Sbjct: 124 FVKLVGRAVRRSQSSADRSSTRS 146
>gi|153956507|ref|YP_001397272.1| ribonuclease P [Clostridium kluyveri DSM 555]
gi|189043732|sp|A5N455|RNPA_CLOK5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146349365|gb|EDK35901.1| RnpA [Clostridium kluyveri DSM 555]
Length = 112
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEV-LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK +F A+ K+G+ L V +N N N R+G +V+KK G +V RNR++R +
Sbjct: 6 IKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKNVN---RLGVSVSKKVGKSVVRNRIKRLI 62
Query: 65 KEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCN 100
KE+ RL ++ + +++G+D V IA++ + + E+ N
Sbjct: 63 KESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINN 99
>gi|331104701|ref|ZP_04590127.2| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024525|gb|EGI04581.1| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 133
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|114569010|ref|YP_755690.1| ribonuclease P protein component [Maricaulis maris MCS10]
gi|114339472|gb|ABI64752.1| ribonuclease P protein component [Maricaulis maris MCS10]
Length = 189
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLL------PR---VGFTVTKKQGCAV 55
LK RR+F KG +R G ++ + + S LL P GFT T+K G AV
Sbjct: 62 LKTRREFLQAAKGRKAVRSG--VVIQARSRDGSLLLGADEKAPAHIGAGFTATRKIGGAV 119
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
RNR +RRL+E RL + G DYV IA+
Sbjct: 120 IRNRAKRRLREIARLLLPLHGQPGIDYVFIAR 151
>gi|302877175|ref|YP_003845808.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
gi|307687874|ref|ZP_07630320.1| ribonuclease P [Clostridium cellulovorans 743B]
gi|302580032|gb|ADL54044.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
Length = 128
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
N + S R+G +V+KK G +V R+R++R + E+ RL K+GHD+V+IA+ A
Sbjct: 37 NYDESGAYNRIGISVSKKVGKSVVRSRVKRLINESYRLNKHK-FKYGHDFVVIARNPA 93
>gi|296444657|ref|ZP_06886621.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
gi|296257925|gb|EFH04988.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
Length = 139
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 16 VKKGELRK--GPFFSLEVLN-NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
K L++ G F L+ + PR G TVTKK AV RNR+RRRL+EA+RLC
Sbjct: 23 AAKSGLQRSGGAAFKLQAAAREGDDEAPPRFGLTVTKKVAGAVGRNRIRRRLREALRLCG 82
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
G+DYV IA+ AL +PF EL E + +
Sbjct: 83 AAGALPGYDYVFIARPGALTMPFAELEAQMAEALAK 118
>gi|219856810|ref|YP_002473932.1| hypothetical protein CKR_3467 [Clostridium kluyveri NBRC 12016]
gi|219570534|dbj|BAH08518.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 126
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEV-LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK +F A+ K+G+ L V +N N N R+G +V+KK G +V RNR++R +
Sbjct: 20 IKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKNVN---RLGVSVSKKVGKSVVRNRIKRLI 76
Query: 65 KEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCN 100
KE+ RL ++ + +++G+D V IA++ + + E+ N
Sbjct: 77 KESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINN 113
>gi|315644293|ref|ZP_07897463.1| ribonuclease P protein component [Paenibacillus vortex V453]
gi|315280668|gb|EFU43957.1| ribonuclease P protein component [Paenibacillus vortex V453]
Length = 128
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG + +KK G AV RNRMRR +KE VR +++H D + I ++ AL ++EL
Sbjct: 54 RVGVSCSKKIGNAVVRNRMRRLVKEIVRHHQHQIIEHI-DLIFIVRKGALDKSYQEL 109
>gi|307638099|gb|ADN80549.1| Ribonuclease P protein component [Helicobacter pylori 908]
gi|325996700|gb|ADZ52105.1| Ribonuclease P protein component [Helicobacter pylori 2018]
gi|325998292|gb|ADZ50500.1| putative ribonuclease P protein component [Helicobacter pylori
2017]
Length = 161
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + N L +G +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
V+KK G AV+RN ++RRL+ V L G V + K D + F L HF+E
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--TRHAALCQGLALVFVPKSDCYHLDFWALEKHFLE 134
>gi|325291451|ref|YP_004267632.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
gi|324966852|gb|ADY57631.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
Length = 126
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 44 GFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
GF +KK G +V+RNR +R ++EAVRL + K G+ VLIA+RD + + E+
Sbjct: 56 GFIASKKVGNSVKRNRAKRLMREAVRLNLSRI-KPGYQVVLIARRDIIRATYAEV 109
>gi|217033921|ref|ZP_03439345.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
gi|216943684|gb|EEC23129.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
Length = 161
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + +L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|296134498|ref|YP_003641745.1| ribonuclease P protein component [Thermincola sp. JR]
gi|296033076|gb|ADG83844.1| ribonuclease P protein component [Thermincola potens JR]
Length = 117
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
+ L L N N RVGF+++KK G AV RNR+RR L E RL + G D ++I
Sbjct: 26 YLVLYYLKNGQPN--SRVGFSISKKVGKAVVRNRIRRLLTEITRLSWHKI-SEGWDIIII 82
Query: 86 AK 87
+
Sbjct: 83 VR 84
>gi|225028840|ref|ZP_03718032.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
gi|224953836|gb|EEG35045.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
Length = 116
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS L+K +F A+ + G+ + F + + N+ S+ RVG +V+KK G ++ R+R
Sbjct: 1 MSEFKSLRKNWEFQAVYRNGKSKANRCFVMIIKKNDTSS--NRVGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
+ R ++E +RL G +K G+D V++A+ A
Sbjct: 59 VTRVIREVMRLHW-GEIKSGYDIVIVARPSA 88
>gi|261410108|ref|YP_003246349.1| ribonuclease P [Paenibacillus sp. Y412MC10]
gi|329925023|ref|ZP_08279967.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
gi|261286571|gb|ACX68542.1| ribonuclease P protein component [Paenibacillus sp. Y412MC10]
gi|328940142|gb|EGG36474.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
Length = 116
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG + +KK G AV RNRMRR +KE VR +++H D + I ++ AL ++EL
Sbjct: 42 RVGVSCSKKIGNAVVRNRMRRLVKEIVRHHQHQIIEHI-DLIFIVRKGALDKSYQEL 97
>gi|329121493|ref|ZP_08250117.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
gi|327469408|gb|EGF14878.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
Length = 84
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
R+GF TKK G AV RNR +R +KE RL LK GHD +++A
Sbjct: 12 RIGFVATKKIGTAVMRNRAKRLMKEVYRLHRHE-LKSGHDAIMLA 55
>gi|255527588|ref|ZP_05394452.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296186786|ref|ZP_06855187.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|255508721|gb|EET85097.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296048500|gb|EFG87933.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
Length = 110
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+ R+G +V+KK G +V RNR++R +KE+ RL +L G+D V IA+ A + E+
Sbjct: 38 VNRIGISVSKKVGKSVTRNRVKRLIKESYRLNNSELLT-GYDLVFIARSAASEKSYNEIS 96
Query: 100 N 100
+
Sbjct: 97 D 97
>gi|169830201|ref|YP_001700359.1| ribonuclease P [Lysinibacillus sphaericus C3-41]
gi|168994689|gb|ACA42229.1| Ribonuclease P protein component [Lysinibacillus sphaericus C3-41]
Length = 117
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV+RN+++R ++ ++ L + LK DYV+IA++ A + F E+
Sbjct: 45 RVGLSVSKKLGNAVKRNQIKRYIRHSI-LDLKDDLKPNMDYVIIARQPAATMDFHEV 100
>gi|210614345|ref|ZP_03290164.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
gi|210150689|gb|EEA81698.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
Length = 116
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V +KG+ + + + N + R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNKDFQIVYRKGQSYANKYLVMYIYQNQSER--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E ++G D V+IA+ A +KE+
Sbjct: 65 ESYRL-QEDKFQNGLDIVIIARAGAKGRTYKEI 96
>gi|149182292|ref|ZP_01860771.1| ribonuclease P [Bacillus sp. SG-1]
gi|148849984|gb|EDL64155.1| ribonuclease P [Bacillus sp. SG-1]
Length = 123
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RN+++R +++ V L + +K+ +DYV+IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVVRNQIKRYIRQ-VFLELKDEVKNNYDYVIIARKPAADMDFHEIKKS 100
Query: 102 FVERVRRNK 110
+ ++++K
Sbjct: 101 MIHVLKKSK 109
>gi|184202002|ref|YP_001856209.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
gi|238689215|sp|B2GJF5|RNPA_KOCRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183582232|dbj|BAG30703.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
Length = 113
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLIAKRDALFIPFKELC 99
RVGF V+K G AV RN+++RRL+E L AE V + G D V+ A A P+ EL
Sbjct: 42 RVGFVVSKAVGNAVTRNKVKRRLRE---LSAETVRERPEGMDLVVRALPPAATAPWDELA 98
Query: 100 NHF 102
+
Sbjct: 99 RDY 101
>gi|322374155|ref|ZP_08048689.1| ribonuclease P protein component [Streptococcus sp. C150]
gi|321277121|gb|EFX54192.1| ribonuclease P protein component [Streptococcus sp. C150]
Length = 111
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 36 NSNLLP-RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N +LL RVG +V+K+ G AV RNR++RRL+ A+ + L+H D+V+IA++ +
Sbjct: 34 NRDLLHYRVGLSVSKRLGNAVTRNRVKRRLRHAL-MDMSSQLEH-QDFVVIARKGVEDLS 91
Query: 95 FKELCNHFVE 104
++E+ ++ V
Sbjct: 92 YQEIYSNLVH 101
>gi|309799089|ref|ZP_07693342.1| ribonuclease P protein component [Streptococcus infantis SK1302]
gi|308117324|gb|EFO54747.1| ribonuclease P protein component [Streptococcus infantis SK1302]
Length = 123
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK + F A+ KKGE F + L NN + RVG +V+KK G AV RN+++RR++
Sbjct: 7 VKKEKDFSAIFKKGESFANRKFVIYRLENNEQHF--RVGLSVSKKLGNAVMRNQIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ + + L D+V+IA++ + + E+
Sbjct: 65 H-ILIEHKNQLVENVDFVVIARKGVEILDYAEM 96
>gi|238926052|ref|YP_002939570.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|238877729|gb|ACR77436.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|291526548|emb|CBK92135.1| ribonuclease P protein component [Eubacterium rectale DSM 17629]
gi|291529191|emb|CBK94777.1| ribonuclease P protein component [Eubacterium rectale M104/1]
Length = 115
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V G + + VL NN N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNKDFQNVYNNGVSFANRYLVMYVLKNNTEN--NRIGISVSKKVGNSVIRHHITRLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G D V+IA+ A + +KE+
Sbjct: 65 ESYRLH-EDMFDSGLDIVVIARVAARHVGYKEI 96
>gi|72163515|ref|YP_291172.1| ribonuclease P protein [Thermobifida fusca YX]
gi|123628489|sp|Q47K73|RNPA_THEFY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71917247|gb|AAZ57149.1| ribonuclease P protein [Thermobifida fusca YX]
Length = 147
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
F + + + PRVGF+V+K G AV R R++RRL+ +R G L G V+
Sbjct: 34 FVPQDTPDQPGGDAPPRVGFSVSKAVGKAVVRKRVQRRLRHLMRERV-GSLPAGSLLVVR 92
Query: 86 AKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
AK A + + EL +R R + +R S
Sbjct: 93 AKPQAALLDYSELAAQLDSALRAVTRPRGQSSHRTRAS 130
>gi|198282183|ref|YP_002218504.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667338|ref|YP_002424548.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198246704|gb|ACH82297.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519551|gb|ACK80137.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 116
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 16 VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+K+G RK F L + N PR+G V++K G AV RNR++RRL+EA R + V
Sbjct: 27 LKQG--RKKVFPELVIYALRNELPHPRLGLAVSRKVGNAVVRNRIKRRLREAFR--QQSV 82
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
G D +++A+ A + + + + + + R
Sbjct: 83 RTRGRDVLVVARPSARQLSMRAMGAYLQQTLERT 116
>gi|310659888|ref|YP_003937609.1| ribonuclease p [Clostridium sticklandii DSM 519]
gi|308826666|emb|CBH22704.1| ribonuclease P [Clostridium sticklandii]
Length = 108
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG++++KK G AV RNR+RR +KE ++ + LK G+D + I + + +KE+
Sbjct: 40 RVGYSISKKVGKAVTRNRIRRLIKENLKDIPD--LKDGYDIIFIGRIPSSESDYKEI 94
>gi|260771042|ref|ZP_05879970.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|260613931|gb|EEX39122.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|315178631|gb|ADT85545.1| ribonuclease P [Vibrio furnissii NCTC 11218]
Length = 107
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ +NN S+ PR+G V KKQ AV RNR +R +E+ RL + L H DY
Sbjct: 19 SPHFTIIARDNNLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRLN-QHKLAHK-DY 74
Query: 83 VLIAKRDALFIPFKELCNHF 102
V+IAK+ A + +E+ F
Sbjct: 75 VVIAKKSAQDLSNEEMFTLF 94
>gi|15612406|ref|NP_224059.1| putative ribonuclease P protein component [Helicobacter pylori J99]
gi|9789807|sp|Q9ZJH0|RNPA_HELPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4155953|gb|AAD06918.1| putative RIBONUCLEASE P PROTEIN COMPONENT [Helicobacter pylori J99]
Length = 161
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + N L +G +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--TRHAALCQGFALVFVPRSDCYHLDFWALEKHFLE 134
>gi|229826867|ref|ZP_04452936.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
gi|229788485|gb|EEP24599.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
Length = 117
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK R+F V G+ + + V NN R+G +V+KK G +V R+R R ++
Sbjct: 6 LKNSREFKRVYDFGKSYANKYLVMYVYNNETEE--NRIGISVSKKVGNSVIRHRATRLIR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
E+VRL E + K G+D V+IA+ +K++ + ++
Sbjct: 64 ESVRLNEEKIRK-GYDIVIIARGSIKDKKYKDVESAYI 100
>gi|166032894|ref|ZP_02235723.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
gi|166027251|gb|EDR46008.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
Length = 112
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V KKG + + VL N R+G +V+KK G ++ R+R+ R ++
Sbjct: 7 LKKHKDFQHVYKKGSSYANKYLVMYVLENQTEG--NRLGISVSKKVGNSIVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
E+ RL E + G D V+IA+ A ++++ + + R
Sbjct: 65 ESYRL-QEDMFSSGRDIVVIARGAAKGKNYRDIESALIHLAR 105
>gi|322515971|ref|ZP_08068911.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
gi|322125570|gb|EFX96905.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
Length = 111
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRR 63
+KK + F AL G F + LN + LP RVG +V+K+ G AV RNR++RR
Sbjct: 7 VKKEKDFKALFDAGHSVANRKFVVYSLNRD----LPHFRVGLSVSKRLGNAVTRNRVKRR 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
L+ A+ + L+H D+V+IA++ + ++++ ++ V
Sbjct: 63 LRHAL-MDMSSQLEH-QDFVVIARKGVEDLSYQDIYSNLVH 101
>gi|330812751|ref|YP_004357213.1| ribonuclease, P protein component [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380859|gb|AEA72209.1| putative ribonuclease, P protein component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 156
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L +N PR+G + KK +V+RNR++R ++E+ R
Sbjct: 38 RHFKAVFDSPTGKVPGKNLLLLARSNDLDHPRLGLVIGKKSVKLSVQRNRLKRLMRESFR 97
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF---VERVRRNK 110
L + ++ G D V++A++ + EL HF +R+ RNK
Sbjct: 98 LNQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNK 139
>gi|282848768|ref|ZP_06258163.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294794205|ref|ZP_06759341.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
gi|282581554|gb|EFB86942.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294454535|gb|EFG22908.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
Length = 119
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF KK GCAVERNR RR +KE RL + ++ G+ V++ +
Sbjct: 45 RIGFVTGKKVGCAVERNRARRLMKEVYRL-NQHAIREGYHIVIVGR 89
>gi|326390365|ref|ZP_08211924.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
gi|325993642|gb|EGD52075.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
Length = 116
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 1 MSNICI-LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
MSN I +KK +F V G+ F + + NN RVG++V+KK G +V RN
Sbjct: 1 MSNKIIKIKKSYEFKKVYSNGKSVANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+RR L E+ RL + +K G D + +A+ + F L N
Sbjct: 59 RVRRLLHESFRLL-DIEIKTGFDIIFVARGKIVEADFHTLKN 99
>gi|299541767|ref|ZP_07052090.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
gi|298725505|gb|EFI66146.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
Length = 114
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++R +++++ + LK DYV+IA+ A + F E+
Sbjct: 42 RVGLSVSKKLGNAVTRNQVKRYIRQSIHELKDD-LKPNMDYVIIARHPAATMDFHEV 97
>gi|325106611|ref|YP_004267679.1| ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
gi|324966879|gb|ADY57657.1| Ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
Length = 138
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
N + R+G +V+KK G AV RNR +R L+EA RL L G DY+LI + D
Sbjct: 46 NGMTISRIGLSVSKKNGNAVCRNRKKRLLREAFRLTRHK-LPIGFDYILIPRVD 98
>gi|317179624|dbj|BAJ57412.1| ribonuclease P, protein component [Helicobacter pylori F30]
Length = 161
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|303228592|ref|ZP_07315419.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
gi|303230630|ref|ZP_07317380.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302514685|gb|EFL56677.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302516771|gb|EFL58686.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
Length = 115
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALF 92
R+GF KK GCAVERNR RR +KE RL + + G+ V++ + +DA +
Sbjct: 45 RIGFVTGKKVGCAVERNRARRLMKEVYRLNQHQI-REGYHIVIVGRGPLKDATY 97
>gi|269798912|ref|YP_003312812.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
gi|269095541|gb|ACZ25532.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
Length = 121
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF KK GCAVERNR RR +KE RL + ++ G+ V++ +
Sbjct: 47 RIGFVTGKKVGCAVERNRARRLMKEVYRL-NQHAIREGYHIVIVGR 91
>gi|227500988|ref|ZP_03931037.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
gi|227216761|gb|EEI82159.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
Length = 116
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
VL NN PR GF+++KK G A RN ++R+L++ +R+ + + D V+I K
Sbjct: 27 DFTVLVKNNGQKHPRFGFSISKKIGKANVRNSLKRKLRDIIRINYGSI--NAVDVVIIPK 84
Query: 88 RDALFIPFKEL---CNHFVERVRRNKRSYY 114
+ + + +L H + + + K +Y
Sbjct: 85 KHTIDFTYDDLKKSLGHVLSKAFKKKMIFY 114
>gi|317178152|dbj|BAJ55941.1| ribonuclease P, protein component [Helicobacter pylori F16]
Length = 161
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|317182653|dbj|BAJ60437.1| ribonuclease P, protein component [Helicobacter pylori F57]
Length = 161
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDLLSCRLKDKKALCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|313893504|ref|ZP_07827074.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
gi|313441947|gb|EFR60369.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
Length = 121
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF KK GCAVERNR RR +KE RL + + G+ V++ +
Sbjct: 47 RIGFVTGKKVGCAVERNRARRLMKEVYRLNQHSI-REGYHIVIVGR 91
>gi|294792399|ref|ZP_06757546.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
gi|294456298|gb|EFG24661.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
Length = 119
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF KK GCAVERNR RR +KE RL + + G+ V++ +
Sbjct: 45 RIGFVTGKKVGCAVERNRARRLMKEVYRLNQHSI-REGYHIVIVGR 89
>gi|114568079|ref|YP_755233.1| RNase P protein component [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122317080|sp|Q0ATU2|RNPA_SYNWW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114339014|gb|ABI69862.1| ribonuclease P protein component [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 119
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
+KG+ G F + + N N R GF KK G AV RNR++R+L+ VR +G +
Sbjct: 19 EKGKRLSGRFLIIYYVENALDN--NRFGFITNKKIGMAVIRNRIKRQLRAIVREY-QGQV 75
Query: 77 KHGHDYVLIAK 87
K+ HD VL+A+
Sbjct: 76 KNKHDIVLVAR 86
>gi|330964183|gb|EGH64443.1| ribonuclease P [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 133
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D ++A++ + EL HF + +R RS
Sbjct: 75 QHQDSLV--GWDIAIVARKGLGDVENPELIQHFGKLWKRLARS 115
>gi|322388372|ref|ZP_08061975.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
gi|321140685|gb|EFX36187.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
Length = 144
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK + F A+ KKG F + L NN ++ RVG +V+KK G AV RN+++RR++
Sbjct: 28 VKKEKDFDAIFKKGASVANRKFVIYRLENNETHF--RVGLSVSKKLGNAVTRNQIKRRIR 85
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
V + L D+V+IA++ + + E+
Sbjct: 86 H-VLIQNSNQLVDNVDFVVIARKGVELLEYAEI 117
>gi|238018225|ref|ZP_04598651.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC
17748]
gi|237864696|gb|EEP65986.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC
17748]
Length = 121
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF KK GCAVERNR RR +KE RL + + G+ V++ +
Sbjct: 46 TRIGFVTGKKVGCAVERNRARRLMKEVYRLNQHSI-REGYHIVIVGR 91
>gi|270289894|ref|ZP_06196120.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304385853|ref|ZP_07368197.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
gi|270281431|gb|EFA27263.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304328357|gb|EFL95579.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
Length = 119
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V KK G AV RN M+RR+++++ L + +L+ D+++IA+ A +P KE+
Sbjct: 42 RVGISVGKKIGNAVMRNYMKRRIRQSI-LEFKPLLRSDVDFLVIARPQASGLPMKEV 97
>gi|262038120|ref|ZP_06011521.1| ribonuclease P protein component [Leptotrichia goodfellowii
F0264]
gi|261747844|gb|EEY35282.1| ribonuclease P protein component [Leptotrichia goodfellowii
F0264]
Length = 108
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+KK + FA + + +++ + NN R GF +KK G AV+RNR++R +E
Sbjct: 6 IKKNKDFAFIYNNSKKVYTRYAIIFIKENNKKE-QRFGFVASKKTGKAVQRNRIKRLFRE 64
Query: 67 AVRLCAEGVLKHGHDYVLIAK 87
V+L + K DY+ + K
Sbjct: 65 FVKLN-KSKFKESSDYIFVGK 84
>gi|325663381|ref|ZP_08151831.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470835|gb|EGC74065.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
Length = 111
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNQDFQIVYKTGKSYANKYLVMYVRENQSGG--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G+D V+IA+ A ++E+
Sbjct: 65 ESYRLQEEH-FQSGYDIVVIARVSANGRSYREM 96
>gi|313891372|ref|ZP_07824988.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
gi|313120147|gb|EFR43323.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
Length = 127
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
R+GF TKK G AV RNR +R +KE RL L GHD +++A
Sbjct: 55 RIGFVATKKIGTAVMRNRAKRLMKEVYRLHRHE-LNSGHDAIMLA 98
>gi|220919595|ref|YP_002494899.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957449|gb|ACL67833.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
Length = 116
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L++RR+F V++ L G L +++ + PR+G TV+ K G AVERNR++R +
Sbjct: 9 LRRRREFVQVQQHGRRLYSGDVLVLALVSGSPR---PRIGITVSSKVGNAVERNRVKRWV 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+EA R + D V+IA+ AL
Sbjct: 66 REAWREIRPELPP--VDLVVIARPAAL 90
>gi|189485050|ref|YP_001955991.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287009|dbj|BAG13530.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 139
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
V N+ +++ R+G TK+ G AV RNR +RRL+E R + L+ G D + I+K
Sbjct: 56 VYKRNDGHIIRRLGLITTKRVGAAVIRNRTKRRLREIFR-TNKHFLESGLDLIFISKPGT 114
Query: 91 LFIPFKEL 98
+ + L
Sbjct: 115 ALLDYDSL 122
>gi|327539969|gb|EGF26568.1| ribonuclease P protein component [Rhodopirellula baltica WH47]
Length = 146
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G T+ KK G AV RNR +R ++EA RL + L G DYV+ K+D + +K +
Sbjct: 66 RLGVTIPKKTGNAVVRNRWKRLIREAFRL-NQSQLPGGFDYVVRPKKD-VTADWKMIEKG 123
Query: 102 FVERVRRNKR 111
FV+ V R R
Sbjct: 124 FVKLVGRAVR 133
>gi|225377583|ref|ZP_03754804.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans
DSM 16841]
gi|225210559|gb|EEG92913.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans
DSM 16841]
Length = 111
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V KKG+ + + VL N+ R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNRDFQNVYKKGKSYANRYLVMYVLENDTDR--NRLGISVSKKVGNSVIRHHVTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + D V+IA+ A I + E+
Sbjct: 65 ESYRL-QEDMFNSSLDIVVIARNTAKDISYHEV 96
>gi|238917979|ref|YP_002931496.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
gi|238873339|gb|ACR73049.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
Length = 121
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALF 92
N R+G +V+KK G ++ R+R+ R ++EA RL + + G+DYV++A+ +D F
Sbjct: 43 NGTDTKRLGVSVSKKVGNSIVRHRLARLIREAFRLSTD-CIPDGYDYVVVARASLKDKGF 101
Query: 93 IPFKELCNHFVE 104
KE H ++
Sbjct: 102 FETKESMIHLLK 113
>gi|154688210|ref|YP_001423371.1| ribonuclease P [Bacillus amyloliquefaciens FZB42]
gi|166226700|sp|A7ZAW4|RNPA_BACA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|154354061|gb|ABS76140.1| RnpA [Bacillus amyloliquefaciens FZB42]
Length = 116
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K+G F L L+ L RVG +V+KK G AV RNR++R ++
Sbjct: 7 LKKNEDFQKVFKRGTSMANRQFVLYTLDQPKQEEL-RVGLSVSKKIGNAVVRNRVKRLIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+AV+ E L D+++IA++ A + F+E
Sbjct: 66 QAVQ--EEKELLKPKDFIIIARKPAGDLSFEE 95
>gi|307707728|ref|ZP_07644207.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|322378155|ref|ZP_08052640.1| ribonuclease P protein component [Streptococcus sp. M334]
gi|307616226|gb|EFN95420.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|321280885|gb|EFX57900.1| ribonuclease P protein component [Streptococcus sp. M334]
Length = 123
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLEYAEM 96
>gi|300857415|ref|YP_003782399.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
gi|300437530|gb|ADK17297.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
Length = 111
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ R+G +V+KK G +V RNR++R +KE RL E + K G+D V IA+
Sbjct: 38 INRLGISVSKKVGKSVIRNRIKRLIKENFRLNIEDI-KVGYDLVFIAR 84
>gi|295402124|ref|ZP_06812083.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112755|ref|YP_003991071.1| ribonuclease P [Geobacillus sp. Y4.1MC1]
gi|294975807|gb|EFG51426.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217856|gb|ADP76460.1| ribonuclease P protein component [Geobacillus sp. Y4.1MC1]
Length = 116
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A + +L G DYV+IA+ A + + E+ +
Sbjct: 42 RIGLSVSKKLGKAVVRNRIKRYIRQAFLEMKDDILP-GKDYVIIARLPAADMTYFEVKSS 100
Query: 102 FVERVRR 108
+ +R+
Sbjct: 101 LLHVLRK 107
>gi|307297276|ref|ZP_07577082.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916536|gb|EFN46918.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 142
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ KKG+ PFF VL N R+G ++ +K G A RNR+RR +KE R +
Sbjct: 23 VFKKGKSIVDPFFV--VLYVKNGLPFSRIGISIRRKFGKAHLRNRLRRLVKEVYRTNKQ- 79
Query: 75 VLKHGHDYVLIAKRD 89
V G+D + IA++D
Sbjct: 80 VFPEGYDILFIARKD 94
>gi|229164438|ref|ZP_04292366.1| Ribonuclease P protein component [Bacillus cereus R309803]
gi|228619043|gb|EEK75941.1| Ribonuclease P protein component [Bacillus cereus R309803]
Length = 119
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F V +KG+ F + LN R+G +V+KK G AV RNR++R ++
Sbjct: 11 IKKNDEFQTVFQKGKSNANRQFVVYQLNKEEQPYF-RIGLSVSKKIGNAVVRNRIKRMIR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+A+ + + + G D+V+IA++ + ++E+ + +R+
Sbjct: 70 QAI-IELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRS 112
>gi|325478863|gb|EGC81973.1| ribonuclease P protein component [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 116
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F++ + NN + PR GFT++KK G A RN ++R+L++ VRL + + D V+I
Sbjct: 28 FTILIKKNNLDH--PRFGFTISKKVGKANVRNSLKRKLRDIVRLNYSNI--NNVDIVIIP 83
Query: 87 KR---DALFIPFKELCNHFVERVRRNKRSYY 114
K+ D + K+ H + + + K +Y
Sbjct: 84 KKHTTDFTYDKLKKSLGHVLSKAFKKKMIFY 114
>gi|325678536|ref|ZP_08158147.1| ribonuclease P protein component [Ruminococcus albus 8]
gi|324109755|gb|EGC03960.1| ribonuclease P protein component [Ruminococcus albus 8]
Length = 127
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
N R+G T KK G AV RNR++R ++ A RLC E + G+D V + + DA
Sbjct: 35 NGTAYNRLGITAGKKLGNAVCRNRVKRIVRAAYRLC-ESEMPIGYDIVFVGRNDA 88
>gi|149007809|ref|ZP_01831405.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
gi|147760659|gb|EDK67632.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
Length = 123
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K+ + F A+ K+G F + L N ++ RVG +V+KK G AV RN+++RR++
Sbjct: 7 IKREKDFKAIFKEGTSFANRKFVIYQLENQKNHF--RVGLSVSKKLGNAVTRNQIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
++ A+G L D+V+IA++ + + E+
Sbjct: 65 HIIQ-NAKGSLVEDVDFVVIARKGVEALGYAEM 96
>gi|60393731|sp|P0A167|RNPA_PSEPK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60393732|sp|P0A168|RNPA_PSEPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|581462|emb|CAA44415.1| unnamed protein product [Pseudomonas putida]
Length = 133
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L + L G D V++A++ I EL HF + +R RS
Sbjct: 75 LNQQ--LLAGLDIVIVARKGLGEIENPELHQHFGKLWKRLARS 115
>gi|168334922|ref|ZP_02693042.1| ribonuclease P protein component [Epulopiscium sp. 'N.t. morphotype
B']
Length = 111
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G +V R+R+ R ++E RL E ++ G D V+IA+ + F E+ N
Sbjct: 41 RLGISVSKKVGNSVTRSRVTRLIRENFRLNEENLVLVGFDIVIIAREASSTKNFYEIKNS 100
Query: 102 FVERVRR 108
+ ++R
Sbjct: 101 LYKLLKR 107
>gi|322421978|ref|YP_004201201.1| ribonuclease P protein component [Geobacter sp. M18]
gi|320128365|gb|ADW15925.1| ribonuclease P protein component [Geobacter sp. M18]
Length = 117
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFTV+KK G AV RN ++RRL+E R L D+ ++AK+ A + F ++
Sbjct: 46 RVGFTVSKKVGNAVVRNSIKRRLREFYR--QNKSLFISADFNIVAKKGADLLDFHQISTE 103
Query: 102 FVERVRRNKRSY 113
R ++ Y
Sbjct: 104 LAAAFGRLRKKY 115
>gi|26986753|ref|NP_742178.1| ribonuclease P [Pseudomonas putida KT2440]
gi|148550511|ref|YP_001270613.1| ribonuclease P [Pseudomonas putida F1]
gi|166991079|sp|A5WBB9|RNPA_PSEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24981343|gb|AAN65642.1|AE016190_8 ribonuclease P protein component [Pseudomonas putida KT2440]
gi|148514569|gb|ABQ81429.1| ribonuclease P protein component [Pseudomonas putida F1]
gi|313496416|gb|ADR57782.1| RnpA [Pseudomonas putida BIRD-1]
Length = 134
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 16 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L + L G D V++A++ I EL HF + +R RS
Sbjct: 76 LNQQ--LLAGLDIVIVARKGLGEIENPELHQHFGKLWKRLARS 116
>gi|168187279|ref|ZP_02621914.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
gi|169294814|gb|EDS76947.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
Length = 112
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++G+ L + NNN + RVG +V+KK G +V R+R++R + E+ RL L
Sbjct: 18 RRGKSYSNSLLVLYIFKNNNIDT-SRVGISVSKKVGNSVVRSRVKRLISESYRLNCNN-L 75
Query: 77 KHGHDYVLIAKRDALFIPFKEL 98
K +D V +A+ + +KE+
Sbjct: 76 KEKYDLVFVARNKSKDKTYKEI 97
>gi|304318137|ref|YP_003853282.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779639|gb|ADL70198.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 124
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ RVGF+V+KK G +V RNR +R L E RL + K G+D + IA+
Sbjct: 49 INRVGFSVSKKVGKSVIRNRYKRLLYENFRLLDRDLFK-GYDIIFIAR 95
>gi|289579534|ref|YP_003478161.1| ribonuclease P protein component [Thermoanaerobacter italicus
Ab9]
gi|297545656|ref|YP_003677958.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289529247|gb|ADD03599.1| ribonuclease P protein component [Thermoanaerobacter italicus
Ab9]
gi|296843431|gb|ADH61947.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 116
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 1 MSNICI-LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
MSN + +KK +F V G+ F + + NN RVG++V+KK G +V RN
Sbjct: 1 MSNKVVKIKKSYEFKKVYSNGKSTANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+RR L E+ RL + +K G D + +A+ + F L
Sbjct: 59 RVRRLLHESFRLL-DIEIKKGFDIIFVARGKIVEADFHTL 97
>gi|332071755|gb|EGI82247.1| ribonuclease P protein component [Streptococcus pneumoniae
GA17545]
Length = 123
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|327389036|gb|EGE87383.1| ribonuclease P protein component [Streptococcus pneumoniae
GA04375]
Length = 123
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|312144703|ref|YP_003996149.1| ribonuclease P protein component [Halanaerobium sp.
'sapolanicus']
gi|311905354|gb|ADQ15795.1| ribonuclease P protein component [Halanaerobium sp.
'sapolanicus']
Length = 108
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ G +V+KK G AV RN+++RR++E +R + K +D V IA+ A+ + F+EL
Sbjct: 39 KYGLSVSKKVGNAVVRNKLKRRMREIIREFEKKGFK-AYDIVFIARNPAVELDFQEL 94
>gi|257127033|ref|YP_003165147.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
gi|257050972|gb|ACV40156.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
Length = 109
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 7 LKKRRQFALV----KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+KK + F+L+ +K + F E +NN R GF +KK G AV+RNR++R
Sbjct: 6 IKKSKDFSLIYNKSQKMHTKYAIIFIKENMNNE-----QRFGFVASKKTGNAVQRNRIKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAK 87
KE V+ + + DY+ + K
Sbjct: 61 LFKEFVK-THKNKFRENTDYIFVGK 84
>gi|307705715|ref|ZP_07642561.1| ribonuclease P protein component [Streptococcus mitis SK597]
gi|307709884|ref|ZP_07646332.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307710909|ref|ZP_07647335.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307617265|gb|EFN96439.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307619374|gb|EFN98502.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307620729|gb|EFN99819.1| ribonuclease P protein component [Streptococcus mitis SK597]
Length = 123
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|148985979|ref|ZP_01819032.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|169833324|ref|YP_001695393.1| ribonuclease P [Streptococcus pneumoniae Hungary19A-6]
gi|238688311|sp|B1I998|RNPA_STRPI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147921952|gb|EDK73077.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|168995826|gb|ACA36438.1| ribonuclease P protein component [Streptococcus pneumoniae
Hungary19A-6]
gi|301800798|emb|CBW33450.1| ribonuclease P protein component [Streptococcus pneumoniae
OXC141]
Length = 123
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|71735437|ref|YP_277295.1| ribonuclease P [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123634466|sp|Q48BF0|RNPA_PSE14 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71555990|gb|AAZ35201.1| ribonuclease P protein component [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 133
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G D V++A++ + EL +F + +R RS
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQYFGKLWKRLARS 115
>gi|154245866|ref|YP_001416824.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
gi|154159951|gb|ABS67167.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
Length = 187
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KRR F K E F ++ + ++ + RVGFTVTKK G +V RNR+RRRL+E
Sbjct: 4 LRKRRDFLAAAKAERAGATSFLMQGRDRGDAGTV-RVGFTVTKKTGNSVVRNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AVR + G DYVL+A+ AL PF+ L VR+
Sbjct: 63 AVRRVLPDAGRAGFDYVLVAREAALRTPFETLVREIERSVRK 104
>gi|167766866|ref|ZP_02438919.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|317499292|ref|ZP_07957565.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711414|gb|EDS21993.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|291558406|emb|CBL37206.1| ribonuclease P protein component [butyrate-producing bacterium
SSC/2]
gi|316893461|gb|EFV15670.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
Length = 112
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N L+ R+F +V +G + + L N+ R+G +V+KK G +V R+R
Sbjct: 1 MKNYHSLRNNREFQMVYNEGNSKANRYLVLYYRKNDLE--YNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R ++E+ RL + LK G+D V+IA++ A
Sbjct: 59 TTRLIRESYRLNQDN-LKTGYDMVVIARQTA 88
>gi|167031022|ref|YP_001666253.1| ribonuclease P [Pseudomonas putida GB-1]
gi|254808083|sp|B0KEU7|RNPA_PSEPG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166857510|gb|ABY95917.1| ribonuclease P protein component [Pseudomonas putida GB-1]
Length = 134
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 16 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L + + G D V++A++ I EL HF + +R RS
Sbjct: 76 LNQQSLA--GLDIVIVARKGLGEIENPELHQHFGKLWKRLARS 116
>gi|229176163|ref|ZP_04303655.1| Ribonuclease P protein component [Bacillus cereus MM3]
gi|228607322|gb|EEK64652.1| Ribonuclease P protein component [Bacillus cereus MM3]
Length = 119
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|182416752|ref|ZP_02948149.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237669612|ref|ZP_04529590.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182379409|gb|EDT76904.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237654846|gb|EEP52408.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 125
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVL----------NNNNSNLLPRVGFTVTKKQGCAVE 56
LKK +F V R+G F+ E+L + +NL ++G +V+KK G +V
Sbjct: 5 LKKNFEFKFV----YRRGKSFANELLVMYILKNKRNKDKENNLYNKLGVSVSKKVGNSVV 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+R +R + E+ RL +LK G+D++ IA+
Sbjct: 61 RSRSKRLISESFRLNCNYILK-GYDFIFIAR 90
>gi|15901863|ref|NP_346467.1| ribonuclease P [Streptococcus pneumoniae TIGR4]
gi|111658726|ref|ZP_01409363.1| hypothetical protein SpneT_02000139 [Streptococcus pneumoniae
TIGR4]
gi|21263957|sp|Q97NI5|RNPA_STRPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14973553|gb|AAK76107.1| ribonuclease P protein component [Streptococcus pneumoniae TIGR4]
Length = 123
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|87198600|ref|YP_495857.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
gi|87134281|gb|ABD25023.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
Length = 162
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQGC 53
M+ I ++KR F +G P F L V + + ++ R G TVTKK G
Sbjct: 1 MTRIATIRKRADFVAANRGIRVARPGFVLLVNRVAKPGDDASVADAEMRFGVTVTKKIGN 60
Query: 54 AVERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAK 87
AV RNRM+RR + +R L G+ G D+V+I +
Sbjct: 61 AVVRNRMKRRFRALLREALPTGGI--PGADHVMIGR 94
>gi|331086953|ref|ZP_08336029.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409614|gb|EGG89053.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 111
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNQDFQIVYKTGKSYANKYLVMYVRENQSRG--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G+D V+IA+ A ++E+
Sbjct: 65 ESYRLQEEH-FQSGYDIVVIARVSANGRSYREM 96
>gi|15903895|ref|NP_359445.1| ribonuclease P [Streptococcus pneumoniae R6]
gi|116515893|ref|YP_817258.1| ribonuclease P [Streptococcus pneumoniae D39]
gi|148992120|ref|ZP_01821894.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|148998806|ref|ZP_01826243.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|149003815|ref|ZP_01828643.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|149011895|ref|ZP_01833043.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|149023610|ref|ZP_01836113.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|168484115|ref|ZP_02709067.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|168487014|ref|ZP_02711522.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|168489935|ref|ZP_02714134.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|168492463|ref|ZP_02716606.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|168494638|ref|ZP_02718781.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|168576993|ref|ZP_02722827.1| ribonuclease P protein component [Streptococcus pneumoniae
MLV-016]
gi|182684978|ref|YP_001836725.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|194397253|ref|YP_002038623.1| ribonuclease P [Streptococcus pneumoniae G54]
gi|221232759|ref|YP_002511913.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225855531|ref|YP_002737043.1| ribonuclease P [Streptococcus pneumoniae JJA]
gi|225857615|ref|YP_002739126.1| ribonuclease P [Streptococcus pneumoniae P1031]
gi|225859798|ref|YP_002741308.1| ribonuclease P [Streptococcus pneumoniae 70585]
gi|225861861|ref|YP_002743370.1| ribonuclease P [Streptococcus pneumoniae Taiwan19F-14]
gi|237650611|ref|ZP_04524863.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974]
gi|237821071|ref|ZP_04596916.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974M2]
gi|298229606|ref|ZP_06963287.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254932|ref|ZP_06978518.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501540|ref|YP_003723480.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|303254946|ref|ZP_07341027.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|303260532|ref|ZP_07346499.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|303262889|ref|ZP_07348825.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|303265200|ref|ZP_07351112.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|303266565|ref|ZP_07352451.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|303268651|ref|ZP_07354442.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|307068653|ref|YP_003877619.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|29427716|sp|Q8DN92|RNPA_STRR6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122277896|sp|Q04ID0|RNPA_STRP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741396|sp|B5E2W2|RNPA_STRP4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691137|sp|B2IML6|RNPA_STRPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808089|sp|C1CA87|RNPA_STRP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808090|sp|B8ZPA3|RNPA_STRPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808092|sp|C1CGX2|RNPA_STRZJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808093|sp|C1CMY8|RNPA_STRZP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808094|sp|C1CTU8|RNPA_STRZT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15459543|gb|AAL00656.1| Ribonuclease P - protein component [Streptococcus pneumoniae R6]
gi|116076469|gb|ABJ54189.1| ribonuclease P protein component [Streptococcus pneumoniae D39]
gi|147755367|gb|EDK62417.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|147758149|gb|EDK65152.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|147763850|gb|EDK70783.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|147929169|gb|EDK80180.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|147929709|gb|EDK80700.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|172042643|gb|EDT50689.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|182630312|gb|ACB91260.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|183570055|gb|EDT90583.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|183571675|gb|EDT92203.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|183573382|gb|EDT93910.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|183575475|gb|EDT96003.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|183577346|gb|EDT97874.1| ribonuclease P protein component [Streptococcus pneumoniae
MLV-016]
gi|194356920|gb|ACF55368.1| ribonuclease P protein component [Streptococcus pneumoniae G54]
gi|220675221|emb|CAR69810.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225720682|gb|ACO16536.1| ribonuclease P protein component [Streptococcus pneumoniae 70585]
gi|225723063|gb|ACO18916.1| ribonuclease P protein component [Streptococcus pneumoniae JJA]
gi|225726113|gb|ACO21965.1| ribonuclease P protein component [Streptococcus pneumoniae P1031]
gi|225727111|gb|ACO22962.1| ribonuclease P protein component [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237135|gb|ADI68266.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|301794977|emb|CBW37441.1| ribonuclease P protein component [Streptococcus pneumoniae
INV104]
gi|301802720|emb|CBW35489.1| ribonuclease P protein component [Streptococcus pneumoniae
INV200]
gi|302598082|gb|EFL65147.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|302635972|gb|EFL66471.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|302638330|gb|EFL68798.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|302641816|gb|EFL72172.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|302643902|gb|EFL74163.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|302645281|gb|EFL75516.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|306410190|gb|ADM85617.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|332071836|gb|EGI82326.1| ribonuclease P protein component [Streptococcus pneumoniae
GA17570]
gi|332199117|gb|EGJ13197.1| ribonuclease P protein component [Streptococcus pneumoniae
GA41317]
gi|332199189|gb|EGJ13268.1| ribonuclease P protein component [Streptococcus pneumoniae
GA47368]
gi|332199473|gb|EGJ13549.1| ribonuclease P protein component [Streptococcus pneumoniae
GA47901]
Length = 123
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 96
>gi|307128243|ref|YP_003880274.1| ribonuclease P protein component [Streptococcus pneumoniae
670-6B]
gi|306485305|gb|ADM92174.1| ribonuclease P protein component [Streptococcus pneumoniae
670-6B]
Length = 123
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K+ + F A+ K+G F + L N ++ RVG +V+KK G AV RN+++RR++
Sbjct: 7 VKREKDFKAIFKEGTSFANRKFVIYQLENQKNHF--RVGLSVSKKLGNAVTRNQIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
++ A+G L D+V+IA++ + + E+
Sbjct: 65 HIIQ-NAKGSLVEDVDFVVIARKGVEALGYAEM 96
>gi|189218936|ref|YP_001939577.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
gi|189185794|gb|ACD82979.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
Length = 145
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 5 CILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I KK+++ AL KG+ FF L +L+ + P+V F V+KK A +RN ++RR
Sbjct: 34 LIAKKKKEIALFFSKGKKFSSSFFILFLLSTEYQSF-PKVFFAVSKKVNRACQRNLIKRR 92
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++E R L + IAK AL PF+EL ++
Sbjct: 93 MREIFRQHPFFKL-SPFAFGWIAKEKALKAPFEELKTDMIK 132
>gi|308071642|ref|YP_003873247.1| ribonuclease P [Paenibacillus polymyxa E681]
gi|305860921|gb|ADM72709.1| Ribonuclease P protein component (RNaseP protein) [Paenibacillus
polymyxa E681]
Length = 116
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG + +KK G AV RNRMRR +KE VR E L D + I ++ A+ + ++EL
Sbjct: 42 RVGISASKKIGNAVVRNRMRRIVKEIVR-HHEHELVEQIDLIFIVRKGAVTMSYQEL 97
>gi|306830234|ref|ZP_07463417.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
gi|304427601|gb|EFM30698.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
Length = 123
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K+ + F A+ K+G F + L N ++ RVG +V+KK G AV RN+++RR++
Sbjct: 7 VKREKDFKAIFKEGTSFANRKFVVYQLENQQNHF--RVGLSVSKKLGNAVTRNQIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
++ A+G L D+V+IA++ + + E+
Sbjct: 65 HIIQ-NAKGSLVDHVDFVVIARKGVETLEYAEM 96
>gi|218708093|ref|YP_002415714.1| ribonuclease P [Vibrio splendidus LGP32]
gi|218321112|emb|CAV17062.1| Ribonuclease P protein component [Vibrio splendidus LGP32]
Length = 121
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN+ SN PR+G V KKQ AV RNR +R +E+ R + DY
Sbjct: 33 SPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFRNTQHKL--PNKDY 88
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 89 VVIAKKSA 96
>gi|229035145|ref|ZP_04189091.1| Ribonuclease P protein component [Bacillus cereus AH1271]
gi|228728211|gb|EEL79241.1| Ribonuclease P protein component [Bacillus cereus AH1271]
Length = 119
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|148989739|ref|ZP_01821048.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
gi|147924855|gb|EDK75938.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
Length = 127
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ A+G L D+V+IA++ + + E+
Sbjct: 45 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEM 100
>gi|55821783|ref|YP_140225.1| ribonuclease P [Streptococcus thermophilus LMG 18311]
gi|55823701|ref|YP_142142.1| ribonuclease P [Streptococcus thermophilus CNRZ1066]
gi|67461280|sp|Q5LY00|RNPA_STRT1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461286|sp|Q5M2K4|RNPA_STRT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|55737768|gb|AAV61410.1| ribonuclease P protein component [Streptococcus thermophilus LMG
18311]
gi|55739686|gb|AAV63327.1| ribonuclease P protein component [Streptococcus thermophilus
CNRZ1066]
Length = 111
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRR 63
+KK + F AL G F + L+ N LP RVG +V+K G AV RNR++RR
Sbjct: 7 VKKEKDFKALFDAGHSVANRKFVVYCLDRN----LPHFRVGLSVSKHLGNAVTRNRVKRR 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
L+ A+ + L+H D+V+IA++ + ++++ ++ V
Sbjct: 63 LRHAL-MDMSSQLEH-QDFVVIARKGVEDLSYQDIYSNLVH 101
>gi|289167101|ref|YP_003445368.1| ribonuclease P [Streptococcus mitis B6]
gi|288906666|emb|CBJ21500.1| ribonuclease P [Streptococcus mitis B6]
Length = 123
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ +G L+ D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHIIQ-NVKGSLEENVDFVVIARKGVETLGYAEM 96
>gi|229087977|ref|ZP_04220082.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
gi|228695334|gb|EEL48214.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
Length = 119
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + +++L
Sbjct: 46 RIGLSVSKKLGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCADMTYEQLKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHAFKRS 112
>gi|86147170|ref|ZP_01065486.1| ribonuclease P [Vibrio sp. MED222]
gi|85835054|gb|EAQ53196.1| ribonuclease P [Vibrio sp. MED222]
Length = 118
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN+ SN PR+G V KKQ AV RNR +R +E+ R + DY
Sbjct: 30 SPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFRNTQHKL--PNKDY 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|65317468|ref|ZP_00390427.1| COG0594: RNase P protein component [Bacillus anthracis str. A2012]
gi|118480514|ref|YP_897665.1| ribonuclease P [Bacillus thuringiensis str. Al Hakam]
gi|228918099|ref|ZP_04081627.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930493|ref|ZP_04093493.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936767|ref|ZP_04099558.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949209|ref|ZP_04111477.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094598|ref|ZP_04225665.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|229124990|ref|ZP_04254164.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|229187716|ref|ZP_04314852.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|118419739|gb|ABK88158.1| ribonuclease P protein component [Bacillus thuringiensis str. Al
Hakam]
gi|228595784|gb|EEK53468.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|228658491|gb|EEL14157.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|228688845|gb|EEL42676.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|228810492|gb|EEM56845.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822976|gb|EEM68817.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829212|gb|EEM74849.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841579|gb|EEM86695.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 123
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|229542317|ref|ZP_04431377.1| ribonuclease P protein component [Bacillus coagulans 36D1]
gi|229326737|gb|EEN92412.1| ribonuclease P protein component [Bacillus coagulans 36D1]
Length = 114
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + VL N R+G +V+KK G AV+RN+++R +++ E + G+DY++IA
Sbjct: 28 FVVYVLEKENRKHF-RIGLSVSKKLGNAVKRNQIKRYIRQVFLELKEDIPP-GYDYIIIA 85
Query: 87 KRDALFIPFKEL 98
++ A + + E+
Sbjct: 86 RKPAAEMNYHEV 97
>gi|167038673|ref|YP_001666251.1| ribonuclease P [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167041023|ref|YP_001664008.1| ribonuclease P [Thermoanaerobacter sp. X514]
gi|300913766|ref|ZP_07131083.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307725548|ref|YP_003905299.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|320117065|ref|YP_004187224.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687617|sp|B0K5N8|RNPA_THEPX RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687686|sp|B0K8I3|RNPA_THEP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166855263|gb|ABY93672.1| ribonuclease P protein component [Thermoanaerobacter sp. X514]
gi|166857507|gb|ABY95915.1| ribonuclease P protein component [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300890451|gb|EFK85596.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307582609|gb|ADN56008.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|319930156|gb|ADV80841.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 116
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I +KK +F V G+ F + + NN RVG++V+KK G +V RNR+RR
Sbjct: 5 IVKIKKSYEFKKVYSNGKSVANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRNRVRR 62
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
L E+ RL + +K G D + +A+ + F L N
Sbjct: 63 LLHESFRLL-DIEIKTGFDIIFVARGKIVEADFHTLKN 99
>gi|254779959|ref|YP_003058066.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
gi|254001872|emb|CAX30122.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
Length = 161
Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPREKEGFKDPLFCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|229142236|ref|ZP_04270760.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
gi|228641254|gb|EEK97561.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
Length = 119
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|139439860|ref|ZP_01773225.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
gi|133774788|gb|EBA38608.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
Length = 112
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K R+ F V +G P + + + RV F K+ GCAV RNR +R ++
Sbjct: 4 IKSRQDFEHVFSQGRRFNHPLIRMTICESVGEGDSGRVAFVGAKRLGCAVVRNRSKRVMR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIA 86
EA R C G G+D +L A
Sbjct: 64 EAARSC--GFPVAGYDIILFA 82
>gi|197302266|ref|ZP_03167325.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
gi|197298697|gb|EDY33238.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
Length = 111
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVL-NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKK R F V K G+ + ++ N N N RVG +V+KK G +V R+ + R +
Sbjct: 7 LKKNRDFQYVYKNGKSYANKCLVMYIIPNEQNKN---RVGISVSKKVGNSVVRHHLTRLI 63
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+E+ RL E + G+D V+IA+ A + E+ N +
Sbjct: 64 RESYRLSEEH-FQCGYDIVVIARTSAKEKSYHEIENALI 101
>gi|197124877|ref|YP_002136828.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
gi|196174726|gb|ACG75699.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
Length = 116
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L++RR+F V++ L G L +++ + PR+G TV+ K G AVERNR++R +
Sbjct: 9 LRRRREFVQVQQHGRRLYSGDVLVLALVSGSPR---PRIGITVSSKVGNAVERNRVKRWV 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+EA R D V+IA+ AL
Sbjct: 66 REAWREIRPEYPP--VDLVVIARPAAL 90
>gi|257070290|ref|YP_003156545.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
gi|256561108|gb|ACU86955.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
Length = 122
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 12 QFALVKKGELRKG---PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+F V +G +R L +L + PRVGF V+KK G AV RNR+ RRL+E V
Sbjct: 13 EFRAVTRGGVRSARSHVVVHLALLTQGDEA--PRVGFVVSKKIGNAVVRNRVTRRLREIV 70
Query: 69 --RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
RL A L G V+ A PF EL H V+
Sbjct: 71 RPRLAA---LPPGAAIVVRALPGIDDQPFSEL-EHDVD 104
>gi|229014653|ref|ZP_04171767.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
gi|229065146|ref|ZP_04200439.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|229136312|ref|ZP_04265059.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|229170190|ref|ZP_04297876.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228613291|gb|EEK70430.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228647184|gb|EEL03272.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|228716175|gb|EEL67894.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|228746664|gb|EEL96553.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
Length = 119
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + + G D+V+IA++ + ++EL
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEELKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|227873166|ref|ZP_03991457.1| ribonuclease P [Oribacterium sinus F0268]
gi|227840997|gb|EEJ51336.1| ribonuclease P [Oribacterium sinus F0268]
Length = 115
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
KKG+ +F + ++ N R+G + +KK G +V R+ + R+L+E RL E +
Sbjct: 18 KKGKSYANAYFVMLIVENGLD--YSRLGISCSKKVGNSVVRHGISRKLREIFRLHKE--I 73
Query: 77 KHGHDYVLIAKRDALFIPFKEL 98
K G D VL+ ++ F + EL
Sbjct: 74 KEGLDIVLVVRQKVAFASYSEL 95
>gi|160946602|ref|ZP_02093805.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
gi|158446986|gb|EDP23981.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
Length = 113
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 44 GFTVTKKQGCAVERNRMRRRLKEAVRL--CAEGVLKHGHDYVLIAKRDALFIPFKEL 98
G +VTKK G A +RN ++RR+KE +RL C G+ G++ V++ K++ L I + EL
Sbjct: 43 GVSVTKKFGKANKRNLIKRRIKEIIRLNVCDLGL---GYEMVILPKKNTLEIDYIEL 96
>gi|317057910|ref|YP_004106377.1| ribonuclease P protein component [Ruminococcus albus 7]
gi|315450179|gb|ADU23743.1| ribonuclease P protein component [Ruminococcus albus 7]
Length = 124
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
N R+G T KK G AV RNR++R ++ A RLC E + G+D V + + DA
Sbjct: 35 NGTPFNRLGITAGKKLGNAVCRNRVKRIVRAAYRLC-ETEMPIGYDIVFVGRNDA 88
>gi|260774543|ref|ZP_05883456.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
gi|260610449|gb|EEX35655.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
Length = 118
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ +NN S+ PR+G V KKQ AV RNR +R +E+ RL + D+
Sbjct: 30 SPHFTIIARDNNLSH--PRLGLAVPKKQIKTAVGRNRFKRIARESFRLHQHKLA--NKDF 85
Query: 83 VLIAKRDALFIPFKELCNHF 102
V+IAK+ A + +EL F
Sbjct: 86 VVIAKKTAQDLSNEELFTLF 105
>gi|30265505|ref|NP_847882.1| ribonuclease P [Bacillus anthracis str. Ames]
gi|47531074|ref|YP_022423.1| ribonuclease P [Bacillus anthracis str. 'Ames Ancestor']
gi|49188324|ref|YP_031577.1| ribonuclease P [Bacillus anthracis str. Sterne]
gi|49481129|ref|YP_039477.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52145295|ref|YP_086752.1| ribonuclease P [Bacillus cereus E33L]
gi|165873026|ref|ZP_02217647.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167635105|ref|ZP_02393422.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|167641750|ref|ZP_02399993.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|170689468|ref|ZP_02880658.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|170707583|ref|ZP_02898036.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|177655269|ref|ZP_02936823.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190569286|ref|ZP_03022180.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|196036129|ref|ZP_03103529.1| ribonuclease P protein component [Bacillus cereus W]
gi|196041981|ref|ZP_03109268.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|196045476|ref|ZP_03112707.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|218906679|ref|YP_002454513.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227818256|ref|YP_002818265.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229603026|ref|YP_002869696.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|254687072|ref|ZP_05150930.1| ribonuclease P [Bacillus anthracis str. CNEVA-9066]
gi|254724145|ref|ZP_05185930.1| ribonuclease P [Bacillus anthracis str. A1055]
gi|254735162|ref|ZP_05192872.1| ribonuclease P [Bacillus anthracis str. Western North America
USA6153]
gi|254742129|ref|ZP_05199816.1| ribonuclease P [Bacillus anthracis str. Kruger B]
gi|254755961|ref|ZP_05207993.1| ribonuclease P [Bacillus anthracis str. Vollum]
gi|254761359|ref|ZP_05213381.1| ribonuclease P [Bacillus anthracis str. Australia 94]
gi|301056961|ref|YP_003795172.1| ribonuclease P [Bacillus anthracis CI]
gi|47606464|sp|Q81JH0|RNPA_BACAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390323|sp|Q630B5|RNPA_BACCZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390442|sp|Q6HAE9|RNPA_BACHK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736852|sp|B7JIL4|RNPA_BACC0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808042|sp|C3P3F8|RNPA_BACAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808043|sp|C3LGU4|RNPA_BACAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30260183|gb|AAP29368.1| ribonuclease P protein component [Bacillus anthracis str. Ames]
gi|47506222|gb|AAT34898.1| ribonuclease P protein component [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182251|gb|AAT57627.1| ribonuclease P protein component [Bacillus anthracis str. Sterne]
gi|49332685|gb|AAT63331.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51978764|gb|AAU20314.1| ribonuclease P [Bacillus cereus E33L]
gi|164711238|gb|EDR16794.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167510304|gb|EDR85707.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|167529579|gb|EDR92329.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|170127579|gb|EDS96453.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|170666570|gb|EDT17343.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|172080196|gb|EDT65288.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190559593|gb|EDV13584.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|195991296|gb|EDX55264.1| ribonuclease P protein component [Bacillus cereus W]
gi|196023683|gb|EDX62359.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|196027236|gb|EDX65856.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|218535691|gb|ACK88089.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227007422|gb|ACP17165.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229267434|gb|ACQ49071.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|300379130|gb|ADK08034.1| ribonuclease P [Bacillus cereus biovar anthracis str. CI]
Length = 119
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|172059051|ref|YP_001815511.1| ribonuclease P [Exiguobacterium sibiricum 255-15]
gi|229890167|sp|B1YGB0|RNPA_EXIS2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171991572|gb|ACB62494.1| ribonuclease P protein component [Exiguobacterium sibiricum 255-15]
Length = 116
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+G +V+KK G AV RN+++R ++EA +L E L +D+V+IA+ A + +E+ +
Sbjct: 42 RIGLSVSKKIGNAVVRNQVKRYVREACQLH-EASLAPNYDFVIIARNPAAKMTAQEVAD 99
>gi|332674214|gb|AEE71031.1| ribonuclease P protein component [Helicobacter pylori 83]
Length = 161
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|83594666|ref|YP_428418.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
gi|83577580|gb|ABC24131.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
Length = 174
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 39/67 (58%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFT +KK G AVERNR RRRL+ AV L K GHDYV+I + L PF L
Sbjct: 103 RVGFTTSKKVGNAVERNRARRRLRAAVDLVIATEAKGGHDYVVIGRAATLGRPFDLLVAD 162
Query: 102 FVERVRR 108
++R
Sbjct: 163 LRAALKR 169
>gi|197120419|ref|YP_002140846.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
gi|226736869|sp|B5EGY0|RNPA_GEOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|197089779|gb|ACH41050.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
Length = 116
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
VL N RVGFTV+KK G AV RN ++RRL+E R L D ++AK+ A
Sbjct: 35 VLLKPNEGTGTRVGFTVSKKVGNAVVRNSIKRRLREFYRQNKS--LFISADINIVAKKGA 92
Query: 91 LFIPFKELCNHFVERVRRNKRSY 113
+ F ++ R ++ Y
Sbjct: 93 DVLDFHQISTELAAAFGRLRKKY 115
>gi|42784683|ref|NP_981930.1| ribonuclease P [Bacillus cereus ATCC 10987]
gi|67461466|sp|Q72WU0|RNPA_BACC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|42740615|gb|AAS44538.1| ribonuclease P protein component [Bacillus cereus ATCC 10987]
Length = 115
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|300118811|ref|ZP_07056531.1| ribonuclease P [Bacillus cereus SJ1]
gi|298723779|gb|EFI64501.1| ribonuclease P [Bacillus cereus SJ1]
Length = 115
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|228994206|ref|ZP_04154106.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
gi|229003009|ref|ZP_04160868.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228758237|gb|EEM07423.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228765658|gb|EEM14312.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
Length = 119
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + +++L
Sbjct: 46 RIGLSVSKKLGNAVVRNRIKRMIRQSIAELKDEI-DSGKDFVIIARKPCADMTYEQLKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHAFKRS 112
>gi|88608075|ref|YP_506724.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
gi|88600244|gb|ABD45712.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
Length = 113
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
S+ +L + + + P VGF VTKK G AV+RN++RR+L+ + Y+ I
Sbjct: 28 SILLLISRGTTVEPVVGFIVTKKVGSAVKRNKVRRKLRGLLPFLVSMKKLLNRAYIFIPS 87
Query: 88 RDALFIPFKELCNHFVERVRRNKRSY 113
++F F + + + R RS+
Sbjct: 88 PASVFSDFSAMREDVLSCLERAGRSH 113
>gi|317181131|dbj|BAJ58917.1| ribonuclease P, protein component [Helicobacter pylori F32]
Length = 161
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|254520698|ref|ZP_05132754.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
gi|226914447|gb|EEH99648.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
Length = 116
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNN----NNSNLL-PRVGFTVTKKQGCAVERNRM 60
L+K +F LV ++G+ L NN NL +VG +V+KK G +V R+R
Sbjct: 5 LRKNNEFKLVYRRGKSLANNLLVLYTFNNRKNKTEDNLTYNKVGISVSKKVGNSVVRSRS 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
+R + E+ RL E LK G+D+V +A+ F E+ N
Sbjct: 65 KRLITESYRLN-EKDLKSGYDFVFVARSAIKGKSFSEVEN 103
>gi|302035742|ref|YP_003796064.1| putative ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
gi|300603806|emb|CBK40138.1| putative Ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
Length = 122
Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ R +KK G F+L++ + +++ +G + ++ G AV RNR +R +
Sbjct: 12 LKRSRDIQHIKKNGRRVSTGLFNLQICPGLSQDVM--LGIVIGRRFGTAVRRNRAKRLFR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
E R L GH +++ KR+ L +P+ EL N + ++R + + +
Sbjct: 70 ELGR-AVRPALVPGHAFLVFPKRECLNLPYAELQNLWRGTLQRQRLARFG 118
>gi|206975830|ref|ZP_03236741.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217962979|ref|YP_002341557.1| ribonuclease P [Bacillus cereus AH187]
gi|226736855|sp|B7HZH3|RNPA_BACC7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206745924|gb|EDZ57320.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217063398|gb|ACJ77648.1| ribonuclease P protein component [Bacillus cereus AH187]
gi|324329438|gb|ADY24698.1| ribonuclease P [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 115
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEELKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|228924232|ref|ZP_04087503.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835450|gb|EEM80820.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 119
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQAITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|163943167|ref|YP_001648051.1| ribonuclease P [Bacillus weihenstephanensis KBAB4]
gi|226741385|sp|A9VTM3|RNPA_BACWK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163865364|gb|ABY46423.1| ribonuclease P protein component [Bacillus weihenstephanensis
KBAB4]
Length = 115
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEELKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|315585835|gb|ADU40216.1| ribonuclease P [Helicobacter pylori 35A]
Length = 161
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|332800546|ref|YP_004462045.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
gi|332698281|gb|AEE92738.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
Length = 123
Score = 40.8 bits (94), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K G PFF++ N R+G +V+KK G +V RN+++RR+KE R+ + +
Sbjct: 18 KSGRRFTNPFFTMYAKKNELG--YSRLGVSVSKKVGNSVVRNKIKRRIKEIFRINYD-FI 74
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
K G D V K A + + + + ++R +
Sbjct: 75 KDGWDIVFSVKPPAAKLDYGSIEREIITLLKRGR 108
>gi|222152200|ref|YP_002561360.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
gi|254808070|sp|B9E8Z6|RNPA_MACCJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222121329|dbj|BAH18664.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
Length = 115
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N+ N R+G +V+KK G AV RNR++R ++E+ E ++K D+++IA++ P
Sbjct: 35 NSENEHFRLGISVSKKIGNAVTRNRIKRAIRESFTKHKEDIIK--DDFIVIARQ-----P 87
Query: 95 FKELC 99
KE+
Sbjct: 88 SKEMT 92
>gi|325275327|ref|ZP_08141280.1| ribonuclease P [Pseudomonas sp. TJI-51]
gi|324099575|gb|EGB97468.1| ribonuclease P [Pseudomonas sp. TJI-51]
Length = 133
Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L + + G D V++A++ + EL HF + +R RS
Sbjct: 75 LNQQSLA--GLDIVIVARKGLGEVENPELHQHFGKLWKRLARS 115
>gi|256751457|ref|ZP_05492335.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749676|gb|EEU62702.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
Length = 86
Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
RVG++V+KK G +V RNR+RR L E+ RL + +K G D + +A+ + F L N
Sbjct: 12 RVGYSVSKKIGKSVVRNRVRRLLHESFRLL-DIEIKTGFDIIFVARGKIVEADFHTLKN 69
>gi|319940012|ref|ZP_08014366.1| ribonuclease P protein component [Streptococcus anginosus
1_2_62CV]
gi|319810726|gb|EFW07053.1| ribonuclease P protein component [Streptococcus anginosus
1_2_62CV]
Length = 119
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ L A D+V+IA++ F+ ++EL
Sbjct: 41 RVGISVSKKLGNAVMRNKIKRRIRHV--LIAHQAELATLDFVVIARKGVEFLTYQEL 95
>gi|269836197|ref|YP_003318425.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
gi|269785460|gb|ACZ37603.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
Length = 129
Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G P + VL N+ + R GF V ++ G A RNR++R ++EAVR L
Sbjct: 19 KQGRSWATPLVVMAVLPNDLEHN--RYGFAVGRRIGKATARNRVKRWMREAVRHL-HPRL 75
Query: 77 KHGHDYVLIAK 87
+ G+D V IA+
Sbjct: 76 RQGYDIVFIAR 86
>gi|116628499|ref|YP_821118.1| ribonuclease P [Streptococcus thermophilus LMD-9]
gi|122266906|sp|Q03IQ0|RNPA_STRTD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116101776|gb|ABJ66922.1| RNase P protein component [Streptococcus thermophilus LMD-9]
gi|312279126|gb|ADQ63783.1| Ribonuclease P protein component [Streptococcus thermophilus ND03]
Length = 111
Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRR 63
+KK + F AL G F + L+ N LP RVG +V+K+ G AV RNR++RR
Sbjct: 7 VKKEKDFKALFDAGHSVANRKFVVYCLDRN----LPHFRVGLSVSKRLGNAVTRNRVKRR 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
L+ A+ + + D+V+IA++ + ++++ ++ V
Sbjct: 63 LRHALMDMSSQL--ENQDFVVIARKGVEDLSYQDIYSNLVH 101
>gi|260904983|ref|ZP_05913305.1| ribonuclease P protein component [Brevibacterium linens BL2]
Length = 121
Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
+R + +++ ++S+ RVGF V+K G AV RNR++RRL+E +R+ + L G
Sbjct: 24 VRSAHLMAHSLIDTDDSHA-ARVGFIVSKAVGNAVVRNRVKRRLREIMRVRLD-TLDSGA 81
Query: 81 DYVLIAKRDALFIPFKEL 98
+V+ A A F EL
Sbjct: 82 LFVIRALPQAADAEFAEL 99
>gi|229148037|ref|ZP_04276376.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
gi|228635462|gb|EEK91953.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
Length = 119
Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|312897430|ref|ZP_07756854.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
gi|310621491|gb|EFQ05027.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
Length = 117
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R GF KK GCAVERN RR +KE RL L G+D VLI +
Sbjct: 45 RSGFVTGKKVGCAVERNYCRRLMKEVYRL-HRSELISGYDLVLIGR 89
>gi|154250756|ref|YP_001411580.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
gi|154154706|gb|ABS61923.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
Length = 134
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MS I L+KRR F + R L+ N PRVGFTVT+K G +V RNR
Sbjct: 1 MSQIERLRKRRDFLAAARASKRAERGLVLQA-NERGDIAPPRVGFTVTRKVGSSVVRNRA 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+RRL+ A K G+DYVLI ++ L
Sbjct: 60 KRRLRAAAAEILPLAAKDGYDYVLIGRQATL 90
>gi|237752893|ref|ZP_04583373.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375160|gb|EEO25251.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 105
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK-HGHDYVLIAKRDALFIPFKELCN 100
R+GF+V+KK G AV RNR++RRL+ R E +L G D +L+AK + +K L +
Sbjct: 37 RIGFSVSKKVGNAVCRNRIKRRLRAIYR---ESMLDLRGGDMILLAKNGLDKVAYKTLQS 93
Query: 101 HF 102
++
Sbjct: 94 NY 95
>gi|30023511|ref|NP_835142.1| ribonuclease P [Bacillus cereus ATCC 14579]
gi|228961751|ref|ZP_04123354.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229051156|ref|ZP_04194700.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|229112900|ref|ZP_04242431.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|229130733|ref|ZP_04259686.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|229153646|ref|ZP_04281822.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|229193738|ref|ZP_04320679.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|48474373|sp|Q814F3|RNPA_BACCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29899072|gb|AAP12343.1| Ribonuclease P protein component [Bacillus cereus ATCC 14579]
gi|228589763|gb|EEK47641.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|228629832|gb|EEK86485.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|228652750|gb|EEL08635.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|228670579|gb|EEL25892.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|228722219|gb|EEL73620.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|228797945|gb|EEM44955.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 119
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|23193193|gb|AAN14422.1|AF319579_3 RNase P [Bacillus weihenstephanensis]
Length = 105
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R +++++ + + + G D+V+IA++ + ++EL
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEEL 97
>gi|86160775|ref|YP_467560.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777286|gb|ABC84123.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
Length = 116
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L++RR+F V++ L G L +++ + PR+G TV+ K G AVERNR++R +
Sbjct: 9 LRRRREFLQVQQHGRRLYSGDVLVLALVSGSPR---PRIGITVSSKVGNAVERNRVKRWV 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+EA R D V+IA+ AL
Sbjct: 66 REAWREIRPEF--PPVDLVVIARPAAL 90
>gi|95929984|ref|ZP_01312724.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
gi|95133953|gb|EAT15612.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
Length = 103
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
+N R GFTV+KK G AV RNR++R L+E VR L +D V++AKR A
Sbjct: 31 TNSPARFGFTVSKKIGGAVVRNRIKRLLREFVRNNYSDDLL--YDVVIVAKRRA 82
>gi|224418477|ref|ZP_03656483.1| ribonuclease P protein component [Helicobacter canadensis MIT
98-5491]
gi|253827791|ref|ZP_04870676.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313142008|ref|ZP_07804201.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511197|gb|EES89856.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313131039|gb|EFR48656.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 108
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK ++ F +V K + P+F L N S+ R+GF V+KK G AV RN ++R
Sbjct: 1 MITLKSKKDFDIVYKSPKKWHNPYFILFFKENLKSS---RIGFCVSKKVGNAVCRNFVKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVR 107
RL+ R ++ D VL+AK P+ L NH + R++
Sbjct: 58 RLRNLYRNSMSNLI--SGDMVLLAKSGLDKAPYSTLQSSYNHALMRLK 103
>gi|317484432|ref|ZP_07943346.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
gi|316924320|gb|EFV45492.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
Length = 103
Score = 40.4 bits (93), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
RVG VTKK G AV RNR++R L+E RL + +L D V++ KR
Sbjct: 31 RVGMAVTKKIGTAVMRNRVKRVLRECFRL-HQALLPPAVDLVIVPKR 76
>gi|75765125|ref|ZP_00744402.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228905431|ref|ZP_04069386.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
gi|228911327|ref|ZP_04075131.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228942636|ref|ZP_04105168.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955737|ref|ZP_04117732.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228968639|ref|ZP_04129622.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228975566|ref|ZP_04136118.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982202|ref|ZP_04142491.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|229072952|ref|ZP_04206148.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|74487388|gb|EAO51327.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228710198|gb|EEL62176.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|228777554|gb|EEM25832.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|228784176|gb|EEM32203.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791068|gb|EEM38686.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228803965|gb|EEM50589.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817062|gb|EEM63155.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228848345|gb|EEM93195.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228854251|gb|EEM98954.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
Length = 119
Score = 40.4 bits (93), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|295103713|emb|CBL01257.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii SL3/3]
Length = 135
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH---GHD 81
P L VL N RVG T TKK G AV+RNR RR +K A+ + L H G+D
Sbjct: 25 PALVLYVLKTRGRNT--RVGLTATKKIGHAVQRNRARRVMKAAI----DEHLDHNIGGYD 78
Query: 82 YVLIAK 87
+ +A+
Sbjct: 79 LIFVAR 84
>gi|78776722|ref|YP_393037.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
gi|78497262|gb|ABB43802.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
Length = 79
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+GFT TKK G AV+RNR +RRL+ A+ +L+ G Y+ +AK+ ++L N F
Sbjct: 1 MGFTATKKIGNAVKRNRAKRRLR-ALFFTYSSLLQDGT-YIFVAKQTISETSHQKLQNDF 58
>gi|153854257|ref|ZP_01995556.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
gi|149753032|gb|EDM62963.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
Length = 113
Score = 40.4 bits (93), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F + +KG+ + + VL N S R+G +V+KK G ++ R+R+ R ++
Sbjct: 7 LKKNKDFQYIYRKGKSYANKYLVMYVLENGTSQ--NRLGISVSKKVGNSIVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
E+ RL E + G D ++IA+ A +K++
Sbjct: 65 ESYRLQEE-RFRCGLDIIVIARIGAKGKDYKDIVG 98
>gi|152977686|ref|YP_001377203.1| ribonuclease P [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189043727|sp|A7GVQ0|RNPA_BACCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|152026438|gb|ABS24208.1| ribonuclease P protein component [Bacillus cytotoxicus NVH 391-98]
Length = 115
Score = 40.4 bits (93), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F A+ +KG F + L+ R+G +V+KK G AV RNR++R ++
Sbjct: 7 IKKNDEFQAVFQKGRSSANRQFVIYQLDKETQPYF-RIGLSVSKKIGNAVVRNRIKRMIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+++ + + G D+V+IA++ + ++E + +R+
Sbjct: 66 QSITELKDEI-DSGKDFVIIARKPCAEMTYEEFKKSLIHAFKRS 108
>gi|315925609|ref|ZP_07921819.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621150|gb|EFV01121.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 114
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGH 80
R F+ L+ N N+N R+G V+KK AV RN++RRR++EA RL G K G+
Sbjct: 25 RHFQFYYLK--NRENTN---RLGIIVSKKVSKRAVVRNKIRRRIREAYRL-HRGDFKTGY 78
Query: 81 DYVLIAKRDALFIPFKEL 98
D ++IAK + + E+
Sbjct: 79 DLIIIAKERCVSATYAEI 96
>gi|228995395|ref|ZP_04155067.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
gi|228764348|gb|EEM13223.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
Length = 119
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + +++L
Sbjct: 46 RIGLSVSKKLGNAVVRNRIKRVIRQSIAELKDEI-DSGKDFVIIARKPCADMTYEQLKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHAFKRS 112
>gi|256830918|ref|YP_003159646.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
gi|256580094|gb|ACU91230.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
Length = 87
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
+L ++ L R+G TV++K G +V RNR++R ++E RL H HD+ L A D
Sbjct: 1 MLEREDAGLSWRLGLTVSRKIGKSVRRNRVKRLVREYFRL-------HQHDFRLCA--DI 51
Query: 91 LFIPFKELC 99
+ +P + +C
Sbjct: 52 VVVPKRGVC 60
>gi|218232085|ref|YP_002370262.1| ribonuclease P [Bacillus cereus B4264]
gi|296505915|ref|YP_003667615.1| ribonuclease P [Bacillus thuringiensis BMB171]
gi|226736854|sp|B7H7A5|RNPA_BACC4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218160042|gb|ACK60034.1| ribonuclease P protein component [Bacillus cereus B4264]
gi|296326967|gb|ADH09895.1| ribonuclease P [Bacillus thuringiensis BMB171]
Length = 115
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|291541860|emb|CBL14970.1| ribonuclease P protein component, eubacterial [Ruminococcus
bromii L2-63]
Length = 113
Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LK R F+ L ++G+ GP VL N + NL R G T KK G AV R R
Sbjct: 1 MSEYITLKDNRDFSGLYRRGKSFVGPVLVTYVLKNKSDNL--RFGITTGKKIGKAVRRTR 58
Query: 60 MRRRLKEA-VRLCAEGVLKHGHDYVLIAKRDALFI 93
RR ++EA +L + +K G+D+V +A+ ++
Sbjct: 59 SRRVIREAYYKLYPD--IKKGYDFVFVARGKTPYV 91
>gi|229181733|ref|ZP_04309056.1| Ribonuclease P protein component [Bacillus cereus 172560W]
gi|228601766|gb|EEK59264.1| Ribonuclease P protein component [Bacillus cereus 172560W]
Length = 119
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|223043335|ref|ZP_03613381.1| ribonuclease P protein component [Staphylococcus capitis SK14]
gi|222443124|gb|EEE49223.1| ribonuclease P protein component [Staphylococcus capitis SK14]
Length = 115
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
NN+ N R+G +V+KK G AV RNR++R ++E ++ E ++ D V+IA+ A
Sbjct: 34 NNSENKHFRLGISVSKKLGNAVTRNRIKRAIRENFKVHKEDII--AKDIVVIARHPA 88
>gi|240145744|ref|ZP_04744345.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|257202160|gb|EEV00445.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|291536992|emb|CBL10104.1| ribonuclease P protein component [Roseburia intestinalis M50/1]
gi|291539804|emb|CBL12915.1| ribonuclease P protein component [Roseburia intestinalis XB6B4]
Length = 112
Score = 40.0 bits (92), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V ++G+ + + VL N+ R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNSDFQKVYRQGKSYANRYLVMYVLENHTEG--NRLGISVSKKVGNSVIRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
E+ RL E + +G D V+IA+ A I + E
Sbjct: 65 ESYRL-HEDMFNNGLDIVVIARSTARDISYHE 95
>gi|260774976|ref|ZP_05883876.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609066|gb|EEX35225.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
Length = 107
Score = 40.0 bits (92), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NNN S+ PR+G V KKQ AV RNR +R +E+ R + L H D+
Sbjct: 19 SPHFTIIARNNNLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFR-NNQHQLAHK-DF 74
Query: 83 VLIAKRDALFIPFKEL 98
V+IAK+ A + +E+
Sbjct: 75 VVIAKKSAQDLSNEEM 90
>gi|218900628|ref|YP_002449039.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|226736853|sp|B7IST7|RNPA_BACC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218542981|gb|ACK95375.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|326943285|gb|AEA19181.1| ribonuclease P [Bacillus thuringiensis serovar chinensis CT-43]
Length = 115
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|297618526|ref|YP_003703685.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
gi|297146363|gb|ADI03120.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
Length = 112
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+KR+ F V KG+ G + L V N+ R G +KK G AV RN+ RRR++
Sbjct: 8 LRKRKDFEKVYSKGKKVFGRYLILYV--GENAAGKNRYGIVASKKVGKAVIRNKSRRRVR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKELCNHFVER 105
E R + L+ G+D ++I K R+A F K ++R
Sbjct: 66 EVAR-TLDSKLRQGYDVIVIVKPLCREADFASVKSDYERLLKR 107
>gi|242310497|ref|ZP_04809652.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239522895|gb|EEQ62761.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 109
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L ++ F +V + + P F L N N RVGF V+KK G AV RN ++R
Sbjct: 1 MITLNTKKDFNIVYNSQKKWHNPHFILFFKENIKEN---RVGFCVSKKVGNAVCRNFIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RL+ R ++ D VL+AK + +K L NH+ + R
Sbjct: 58 RLRSLYRASLPNLI--NGDMVLLAKNGLDKVDYKTLENHYKHALMR 101
>gi|162147921|ref|YP_001602382.1| ribonuclease P protein component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542538|ref|YP_002274767.1| ribonuclease P protein component [Gluconacetobacter
diazotrophicus PAl 5]
gi|226741389|sp|A9HKS8|RNPA_GLUDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161786498|emb|CAP56080.1| Ribonuclease P protein component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530215|gb|ACI50152.1| ribonuclease P protein component [Gluconacetobacter
diazotrophicus PAl 5]
Length = 116
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR +F + +G P L+ L ++S+ R+GFTVTKK G AV RNR RRRL+
Sbjct: 8 LKKRAEFLKVASRGRKVPSPGLVLQALGRDDSDP-ARIGFTVTKKVGNAVVRNRTRRRLR 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAK 87
EAVR+ +G D VLI +
Sbjct: 67 EAVRVVEREEPLNGVDLVLIGR 88
>gi|291486744|dbj|BAI87819.1| ribonuclease P [Bacillus subtilis subsp. natto BEST195]
Length = 116
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L L+ ++ L RVG +V+KK G AV RNR++R +++A L + LK DY++IA
Sbjct: 28 FVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNRIKRLIRQAF-LEEKERLKE-KDYIIIA 84
Query: 87 KRDALFIPFKE 97
++ A + F+E
Sbjct: 85 RKPASQLTFEE 95
>gi|259047908|ref|ZP_05738309.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
gi|259035442|gb|EEW36697.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
Length = 114
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RNR++RR++ + + + ++ D+++IA+ + + ++E+
Sbjct: 42 RVGISVSKKLGNAVTRNRLKRRIRHILMELDDQITQNA-DFIVIARSPIVQMSYQEM 97
>gi|229099914|ref|ZP_04230837.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
gi|229118977|ref|ZP_04248322.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228664502|gb|EEL19998.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228683529|gb|EEL37484.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
Length = 119
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|308175812|ref|YP_003922517.1| protein component of ribonuclease P [Bacillus amyloliquefaciens
DSM 7]
gi|307608676|emb|CBI45047.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus amyloliquefaciens DSM 7]
gi|328555788|gb|AEB26280.1| ribonuclease P [Bacillus amyloliquefaciens TA208]
gi|328914177|gb|AEB65773.1| protein component of ribonuclease P (RNase P) [Bacillus
amyloliquefaciens LL3]
Length = 116
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K+G F L L+ L RVG +V+KK G AV RNR++R ++
Sbjct: 7 LKKNEDFQKVFKRGTSMANRQFVLYTLDQPQQKEL-RVGLSVSKKIGNAVVRNRVKRLIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+A++ E L D+++IA++ A + +E
Sbjct: 66 QAIQ--EEKELLKPKDFIIIARKPAAELSIEE 95
>gi|146319669|ref|YP_001199381.1| ribonuclease P [Streptococcus suis 05ZYH33]
gi|146321864|ref|YP_001201575.1| ribonuclease P [Streptococcus suis 98HAH33]
gi|145690475|gb|ABP90981.1| RNase P protein component [Streptococcus suis 05ZYH33]
gi|145692670|gb|ABP93175.1| RNase P protein component [Streptococcus suis 98HAH33]
gi|292559285|gb|ADE32286.1| RNaseP protein [Streptococcus suis GZ1]
Length = 133
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN+++RR++ + C ++ D+V+IA++ + ++E+ +
Sbjct: 55 RVGLSVSKKLGNAVMRNKIKRRIRHILIECQHQLV--ADDFVIIARKGVEELSYQEMKQN 112
Query: 102 FV 103
+
Sbjct: 113 LI 114
>gi|104784449|ref|YP_610947.1| ribonuclease P [Pseudomonas entomophila L48]
gi|122401166|sp|Q1I2H2|RNPA_PSEE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|95113436|emb|CAK18164.1| ribonuclease P protein component [Pseudomonas entomophila L48]
Length = 133
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 16 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L + + G D V++A++ + EL HF + +R RS S
Sbjct: 76 LNQQ--MLAGLDIVIVARKGLGEVENPELHQHFGKLWKRLVRSRPS 119
>gi|206970039|ref|ZP_03230992.1| ribonuclease P protein component [Bacillus cereus AH1134]
gi|206734616|gb|EDZ51785.1| ribonuclease P protein component [Bacillus cereus AH1134]
Length = 115
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++A+ + + G D+V+IA++ + ++E+
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|329768088|ref|ZP_08259597.1| ribonuclease P [Gemella haemolysans M341]
gi|328838243|gb|EGF87855.1| ribonuclease P [Gemella haemolysans M341]
Length = 114
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G A ERN+++R ++E + E V +D ++IA+ A +PF E +
Sbjct: 41 RLGISVSKKLGKAFERNKIKRYIRETFKTRKEYV--KNYDIIVIARPGAKELPFLEFGSS 98
Query: 102 FVERVRRNK 110
++R+K
Sbjct: 99 IDHVLKRSK 107
>gi|229106082|ref|ZP_04236694.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
gi|228677337|gb|EEL31602.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
Length = 119
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|297585592|ref|YP_003701372.1| ribonuclease P protein component [Bacillus selenitireducens
MLS10]
gi|297144049|gb|ADI00807.1| ribonuclease P protein component [Bacillus selenitireducens
MLS10]
Length = 120
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+K F V K G+ F + + N+ + R G +++KK G AV RNR++R +K
Sbjct: 7 LRKNEDFQTVFKHGKSVANRQFVVYTFDRNDQDP-SRFGLSISKKIGNAVTRNRIKRLVK 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E +R + L G D V+IA++ + F ++
Sbjct: 66 EVIRHQLDH-LPLGQDVVIIARKPVATMDFHDV 97
>gi|207092097|ref|ZP_03239884.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 161
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--SKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|320157822|ref|YP_004190201.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
gi|319933134|gb|ADV87998.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
Length = 107
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NNN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 19 SPHFTIIARNNNLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNTQHQLP--NKDF 74
Query: 83 VLIAKRDALFIPFKEL 98
V+IAK+ A + +EL
Sbjct: 75 VVIAKKSAQDLSNEEL 90
>gi|27364439|ref|NP_759967.1| ribonuclease P [Vibrio vulnificus CMCP6]
gi|37678188|ref|NP_932797.1| ribonuclease P [Vibrio vulnificus YJ016]
gi|29427709|sp|Q8DDI3|RNPA_VIBVU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397707|sp|Q7MQK4|RNPA_VIBVY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27360558|gb|AAO09494.1| ribonuclease P protein component [Vibrio vulnificus CMCP6]
gi|37196927|dbj|BAC92768.1| RNase P protein component [Vibrio vulnificus YJ016]
Length = 118
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NNN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNNLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNTQHQLP--NKDF 85
Query: 83 VLIAKRDALFIPFKEL 98
V+IAK+ A + +EL
Sbjct: 86 VVIAKKSAQDLSNEEL 101
>gi|87310425|ref|ZP_01092555.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
gi|87286924|gb|EAQ78828.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
Length = 125
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
N L PR+G V+KK G AV RNR +RRL+EA R+ + L D ++I R A+ P
Sbjct: 43 NDQLGPRIGLVVSKKVGNAVRRNRWKRRLREAFRI-QQARLPENCDLIVI-PRAAIEPPL 100
Query: 96 KELCNHFVERVRRNKR 111
+ LC VE RR ++
Sbjct: 101 ERLCRSLVETARRARK 116
>gi|293364548|ref|ZP_06611271.1| ribonuclease P protein component [Streptococcus oralis ATCC
35037]
gi|306826339|ref|ZP_07459672.1| ribonuclease P protein component [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|307702546|ref|ZP_07639499.1| ribonuclease P protein component [Streptococcus oralis ATCC
35037]
gi|315611931|ref|ZP_07886849.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|322376168|ref|ZP_08050676.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|331265591|ref|YP_004325221.1| ribonuclease P [Streptococcus oralis Uo5]
gi|291316960|gb|EFE57390.1| ribonuclease P protein component [Streptococcus oralis ATCC
35037]
gi|304431452|gb|EFM34435.1| ribonuclease P protein component [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|307623892|gb|EFO02876.1| ribonuclease P protein component [Streptococcus oralis ATCC
35037]
gi|315315920|gb|EFU63954.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|321278850|gb|EFX55895.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|326682263|emb|CBY99880.1| ribonuclease P [Streptococcus oralis Uo5]
Length = 123
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ ++ +++H D+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNQIKRRIRHILQSVKGSLVEHV-DFVVIARKGVETLEYAEM 96
>gi|58584949|ref|YP_198522.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419265|gb|AAW71280.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 119
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 1 MSNICILKKRRQFALVKKGELR------KGPFFSLEVLNNNNSNL---LPRVGFTVTKKQ 51
M N I K++ F+L K +L +G + SL + + RVG ++KK
Sbjct: 1 MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKA 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
G A +RN+++RRL+ R + G+ Y+++ ++ + +K L
Sbjct: 61 GKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQASYKNL 107
>gi|223933966|ref|ZP_03625924.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|253752666|ref|YP_003025807.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|253754492|ref|YP_003027633.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|253756425|ref|YP_003029565.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|223897358|gb|EEF63761.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|251816955|emb|CAZ52604.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|251818889|emb|CAZ56732.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|251820738|emb|CAR47500.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|319759083|gb|ADV71025.1| ribonuclease P [Streptococcus suis JS14]
Length = 119
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN+++RR++ + C ++ D+V+IA++ + ++E+ +
Sbjct: 41 RVGLSVSKKLGNAVMRNKIKRRIRHILIECQHQLV--ADDFVIIARKGVEELSYQEMKQN 98
Query: 102 FV 103
+
Sbjct: 99 LI 100
>gi|332971201|gb|EGK10164.1| ribonuclease P protein component [Desmospora sp. 8437]
Length = 106
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V++K G AV RNR++R +KE R + L D +LIA++ A + F +
Sbjct: 20 RIGISVSRKVGNAVTRNRIKRLVKEITRRWVDS-LPPDTDLILIARKPAADMDFHRM 75
>gi|269958146|ref|YP_003327935.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
gi|269306827|gb|ACZ32377.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
Length = 125
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ +L +N + P+VGF V+K G +V+RN ++RRL+E VR
Sbjct: 31 VHLLVDNEGDAAPQVGFVVSKAVGNSVQRNLVKRRLREIVR 71
>gi|258622953|ref|ZP_05717968.1| ribonuclease P [Vibrio mimicus VM573]
gi|258626077|ref|ZP_05720928.1| ribonuclease P [Vibrio mimicus VM603]
gi|258581603|gb|EEW06501.1| ribonuclease P [Vibrio mimicus VM603]
gi|258584736|gb|EEW09470.1| ribonuclease P [Vibrio mimicus VM573]
Length = 118
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ NN S+ PR+G V KKQ AV RNR +R +E+ RL + L H D+
Sbjct: 30 SPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRLCRESFRL-HQNQLAHK-DF 85
Query: 83 VLIAKRDALFIPFKELCN 100
V+IAK+ A + +EL N
Sbjct: 86 VVIAKKSAQDLSNEELFN 103
>gi|314934962|ref|ZP_07842321.1| ribonuclease P protein component [Staphylococcus caprae C87]
gi|313652892|gb|EFS16655.1| ribonuclease P protein component [Staphylococcus caprae C87]
Length = 115
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
NN N R+G +V+KK G AV RNR++R ++E ++ E ++ D V+IA+ A
Sbjct: 34 NNKENKHFRLGISVSKKLGNAVTRNRIKRAIRENFKVHKEDII--AKDIVVIARHPA 88
>gi|253702735|ref|YP_003023924.1| ribonuclease P [Geobacter sp. M21]
gi|259494108|sp|C6DYS3|RNPA_GEOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|251777585|gb|ACT20166.1| ribonuclease P protein component [Geobacter sp. M21]
Length = 116
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFTV+KK G AV RN ++RRL+E R + D ++AK+ A + F+++
Sbjct: 46 RVGFTVSKKVGNAVVRNSIKRRLREFYRQNKSLFIL--ADINIVAKKGADVLDFQQISTE 103
Query: 102 FVERVRRNKRSY 113
R ++ Y
Sbjct: 104 LAAAFGRLRKKY 115
>gi|288906263|ref|YP_003431485.1| ribonuclease P protein component [Streptococcus gallolyticus
UCN34]
gi|306832309|ref|ZP_07465463.1| ribonuclease P protein component [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|306834433|ref|ZP_07467547.1| ribonuclease P protein component [Streptococcus bovis ATCC
700338]
gi|325979274|ref|YP_004288990.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|288732989|emb|CBI14570.1| ribonuclease P protein component [Streptococcus gallolyticus
UCN34]
gi|304423419|gb|EFM26571.1| ribonuclease P protein component [Streptococcus bovis ATCC
700338]
gi|304425748|gb|EFM28866.1| ribonuclease P protein component [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325179202|emb|CBZ49246.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 119
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN ++R+++ V + L+H HD+V+IA++ + + E+
Sbjct: 41 RVGLSVSKKLGNAVTRNSIKRKIRHVVMELSPN-LRH-HDFVIIARKGVEELDYHEV 95
>gi|261213268|ref|ZP_05927550.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|262172773|ref|ZP_06040451.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262402087|ref|ZP_06078651.1| ribonuclease P protein component [Vibrio sp. RC586]
gi|260837542|gb|EEX64245.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|261893849|gb|EEY39835.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262351733|gb|EEZ00865.1| ribonuclease P protein component [Vibrio sp. RC586]
Length = 107
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ NN S+ PR+G V KKQ AV RNR +R +E+ RL + L H D+
Sbjct: 19 SPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRLCRESFRL-HQNQLAHK-DF 74
Query: 83 VLIAKRDALFIPFKELCN 100
V+IAK+ A + +EL N
Sbjct: 75 VVIAKKSAQDLSNEELFN 92
>gi|241889068|ref|ZP_04776372.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
gi|241864317|gb|EER68695.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
Length = 114
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G A ERN+++R ++E + E V +D ++IA+ A +PF E +
Sbjct: 41 RLGISVSKKLGKAFERNKIKRYIRETFKTRKELV--KNYDIIVIARPGAKDMPFLEFGSS 98
Query: 102 FVERVRRNK 110
++R+K
Sbjct: 99 IDHVLKRSK 107
>gi|188528218|ref|YP_001910905.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|238691954|sp|B2UVJ3|RNPA_HELPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188144458|gb|ACD48875.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|308062711|gb|ADO04599.1| ribonuclease P protein component [Helicobacter pylori Cuz20]
Length = 161
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|228988716|ref|ZP_04148801.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229159047|ref|ZP_04287103.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|229199689|ref|ZP_04326332.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228583784|gb|EEK41959.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228624466|gb|EEK81237.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|228771028|gb|EEM19509.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 119
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++E+
Sbjct: 46 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 104
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 105 LIHVFKRS 112
>gi|149193810|ref|ZP_01870908.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
gi|149135763|gb|EDM24241.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
Length = 84
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
FF L +L++N + P V ++KK AV RN+++RR++ VR+ GH +++I
Sbjct: 5 FFILYILSSNEFKVSPVVSKKISKK---AVIRNKIKRRVRNLVRIF----FSKGH-FLVI 56
Query: 86 AKRDALFIPFKELCNHF 102
K D I F EL N F
Sbjct: 57 VKEDISTIDFIELENDF 73
>gi|317010180|gb|ADU80760.1| ribonuclease P protein component [Helicobacter pylori India7]
Length = 161
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDVSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|288554604|ref|YP_003426539.1| ribonuclease P [Bacillus pseudofirmus OF4]
gi|288545764|gb|ADC49647.1| ribonuclease P [Bacillus pseudofirmus OF4]
Length = 120
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK F+ V KKG+ F L L R+G +V+KK G AV RNR++R ++
Sbjct: 7 IKKNEDFSSVFKKGQSVANRQFVLYSLKKEGQASF-RIGLSVSKKVGNAVVRNRIKRYVR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
V + L G+D+V+IA+ P E+ H VE
Sbjct: 66 -TVFQTYQDELPGGYDFVIIARH-----PVSEMDFHQVE 98
>gi|15646057|ref|NP_208239.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
gi|2500593|sp|P55997|RNPA_HELPY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|2314624|gb|AAD08489.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
Length = 161
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSQEPPKEKAGFKDPLFCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|313885571|ref|ZP_07819321.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619301|gb|EFR30740.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
Length = 128
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
RVG +V KK G AVERN+++R L++A+ E ++ D +LIA++D
Sbjct: 44 RVGLSVGKKMGNAVERNQIKRYLRQALHEL-EPAIQTDLDILLIARKD 90
>gi|225867468|ref|YP_002752846.1| ribonuclease P protein component [Bacillus cereus 03BB102]
gi|254808044|sp|C1ER80|RNPA_BACC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|225786123|gb|ACO26340.1| ribonuclease P protein component [Bacillus cereus 03BB102]
Length = 115
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++E+
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|210135614|ref|YP_002302053.1| ribonuclease P protein component [Helicobacter pylori P12]
gi|226741390|sp|B6JNU5|RNPA_HELP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|210133582|gb|ACJ08573.1| ribonuclease P protein component [Helicobacter pylori P12]
Length = 161
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDKVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|89101260|ref|ZP_01174081.1| ribonuclease P [Bacillus sp. NRRL B-14911]
gi|89084025|gb|EAR63205.1| ribonuclease P [Bacillus sp. NRRL B-14911]
Length = 124
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+G +V+KK G AV RN+++R +++A + + + +DYV+IA++ + F E+ N
Sbjct: 42 RIGLSVSKKIGNAVVRNQIKRYVRQAFHEL-DASIHNEYDYVIIARKPVADMGFHEIKN 99
>gi|47568686|ref|ZP_00239383.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|222098964|ref|YP_002533022.1| ribonuclease p [Bacillus cereus Q1]
gi|254808045|sp|B9IT45|RNPA_BACCQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|47554674|gb|EAL13028.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|221243023|gb|ACM15733.1| ribonuclease P protein component [Bacillus cereus Q1]
Length = 115
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++++ + + G D+V+IA++ + ++E+
Sbjct: 42 RIGLSVSKKIGNAVVRNRIKRMIRQSITELKDEI-DSGKDFVIIARKPCAEMTYEEVKKS 100
Query: 102 FVERVRRN 109
+ +R+
Sbjct: 101 LIHVFKRS 108
>gi|310644874|ref|YP_003949633.1| ribonuclease p protein component [Paenibacillus polymyxa SC2]
gi|309249825|gb|ADO59392.1| Ribonuclease P protein component [Paenibacillus polymyxa SC2]
Length = 116
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG + +KK G AV RNRMRR +KE VR + +++ D + I ++ A+ ++EL
Sbjct: 42 RVGISASKKIGNAVVRNRMRRIVKEIVRHHEQELVEQI-DLIFIVRKGAVTKSYQEL 97
>gi|308185211|ref|YP_003929344.1| ribonuclease P protein component [Helicobacter pylori SJM180]
gi|308061131|gb|ADO03027.1| ribonuclease P protein component [Helicobacter pylori SJM180]
Length = 161
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 30/124 (24%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + +L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLK----EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V+KK G AV+RN ++RRL+ + V LC G V + + D + F L HF
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLTLKHVALC------QGLALVFVPRSDCYHLDFWALEKHF 132
Query: 103 VERV 106
+E +
Sbjct: 133 LEML 136
>gi|89074707|ref|ZP_01161165.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90581129|ref|ZP_01236928.1| ribonuclease P [Vibrio angustum S14]
gi|89049471|gb|EAR55032.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90437650|gb|EAS62842.1| ribonuclease P [Vibrio angustum S14]
Length = 118
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N PR+G V KKQ AV+RNR +R ++E+ RL + D+V+IAK
Sbjct: 33 LTILARSNELNCPRLGLAVPKKQIKTAVDRNRFKRIVRESFRLKQHQL--PAKDFVVIAK 90
Query: 88 RDA 90
+ A
Sbjct: 91 KSA 93
>gi|84394510|ref|ZP_00993220.1| ribonuclease P [Vibrio splendidus 12B01]
gi|148982292|ref|ZP_01816699.1| ribonuclease P [Vibrionales bacterium SWAT-3]
gi|84374863|gb|EAP91800.1| ribonuclease P [Vibrio splendidus 12B01]
gi|145960557|gb|EDK25914.1| ribonuclease P [Vibrionales bacterium SWAT-3]
Length = 118
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN+ SN PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFRNTQHKL--PNKDF 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|330833640|ref|YP_004402465.1| ribonuclease P [Streptococcus suis ST3]
gi|329307863|gb|AEB82279.1| ribonuclease P [Streptococcus suis ST3]
Length = 119
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN+++RR++ + C ++ D+V+IA++ + ++E+ +
Sbjct: 41 RVGLSVSKKLGNAVMRNKIKRRIRHILIECQHQLV--ADDFVIIARKGVEELSYQEMKQN 98
Query: 102 FV 103
+
Sbjct: 99 LI 100
>gi|261838723|gb|ACX98489.1| ribonuclease P protein component [Helicobacter pylori 51]
Length = 161
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|171911026|ref|ZP_02926496.1| ribonuclease P protein component [Verrucomicrobium spinosum DSM
4136]
Length = 130
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ +F V+ +G G + L VL + R G ++K G AV+RN +RRRL+
Sbjct: 9 LRSASEFGRVRSEGTTYPGRYVVLGVLRADEEAPW-RSGLITSRKVGGAVQRNLVRRRLR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E +R L G V+IA+ A F EL F
Sbjct: 68 EILRATP---LAPGVWLVVIARWKAAGATFDELRTDF 101
>gi|298528958|ref|ZP_07016361.1| ribonuclease P protein component [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510394|gb|EFI34297.1| ribonuclease P protein component [Desulfonatronospira
thiodismutans ASO3-1]
Length = 128
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R+G T ++K G AV RNR++R ++EA RL + ++ G DYV+++K+
Sbjct: 46 RLGITASRKIGPAVLRNRIKRLVREAFRL-NQHLVPPGLDYVVVSKK 91
>gi|261840123|gb|ACX99888.1| ribonuclease P [Helicobacter pylori 52]
Length = 161
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|317013214|gb|ADU83822.1| ribonuclease P protein component [Helicobacter pylori Lithuania75]
Length = 161
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|322391228|ref|ZP_08064700.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
gi|321145981|gb|EFX41370.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
Length = 123
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK + F A+ K+GE F + L N + RVG +V+KK G AV RN+++RR++
Sbjct: 7 VKKEKDFDAIFKEGESVANRKFVIYRLENQQQHF--RVGLSVSKKLGNAVTRNQIKRRIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ + ++ + D+V+IA++ + + E+
Sbjct: 65 HVLIENSNQIVDNV-DFVVIARKGVETLEYAEI 96
>gi|297380699|gb|ADI35586.1| ribonuclease P protein component [Helicobacter pylori v225d]
gi|308064205|gb|ADO06092.1| ribonuclease P protein component [Helicobacter pylori Sat464]
Length = 161
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|70727676|ref|YP_254592.1| ribonuclease P [Staphylococcus haemolyticus JCSC1435]
gi|123659002|sp|Q4L2Z1|RNPA_STAHJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68448402|dbj|BAE05986.1| ribonuclease P protein component [Staphylococcus haemolyticus
JCSC1435]
Length = 114
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK F + K+G+ F + N+N + R+G +V+KK G AV RNR++R ++
Sbjct: 7 IKKNTDFQTIYKRGKSVANRQFVVYTYNSNKDHF--RLGISVSKKLGNAVTRNRIKRAIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
E ++ E ++ D ++IA++ A
Sbjct: 65 ENFKIHKEDII--ARDIIVIARQPA 87
>gi|260881792|ref|ZP_05405232.2| ribonuclease P protein component [Mitsuokella multacida DSM
20544]
gi|260847898|gb|EEX67905.1| ribonuclease P protein component [Mitsuokella multacida DSM
20544]
Length = 104
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
RVGF KK GCAV RNR++R L+EA RL
Sbjct: 4 RVGFAAGKKLGCAVTRNRVKRLLREAYRL 32
>gi|308183544|ref|YP_003927671.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
gi|308065729|gb|ADO07621.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
Length = 161
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKESPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCCHLDFWALEKHFLEML 136
>gi|225016762|ref|ZP_03705954.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
gi|224950430|gb|EEG31639.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
Length = 112
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
L +G+ + P +L R+G TV+KK G AV RNR+RR +K A R
Sbjct: 16 LYYRGKFKASPVLVTYILKCRGKQC--RMGITVSKKIGKAVVRNRVRRIIKAAYREVEPQ 73
Query: 75 VLKHGHDYVLIAKRDAL 91
G+D V +A+ A+
Sbjct: 74 FHLAGYDVVFVARSKAV 90
>gi|255283811|ref|ZP_05348366.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
gi|255265694|gb|EET58899.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
Length = 118
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V ++G+ + + L N + R+G +V+KK G +V R+RM R ++
Sbjct: 7 LKKNRDFQNVYRQGKSYANKYLIMYALQNAGTR--NRLGISVSKKVGNSVVRHRMTRLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G D+V+I + A ++E+
Sbjct: 65 ESYRLN-ESAFQGGFDFVVIVRPAAKEKGYREI 96
>gi|307265439|ref|ZP_07546995.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919553|gb|EFN49771.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 86
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
RVG++V+KK G +V RNR+RR L E+ R + +K G D + +A+ + F L N
Sbjct: 12 RVGYSVSKKIGKSVVRNRVRRLLHESFRFL-DIEIKTGFDIIFVARGKIVEADFHTLKN 69
>gi|20809129|ref|NP_624300.1| ribonuclease P [Thermoanaerobacter tengcongensis MB4]
gi|22001932|sp|Q8R6K4|RNPA_THETN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|20517809|gb|AAM25904.1| RNase P protein component [Thermoanaerobacter tengcongensis MB4]
Length = 116
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKE 97
R G++V+KK G +V RNR++R L E+ RL L+ G+D V +A+ +A F KE
Sbjct: 42 RAGYSVSKKIGKSVVRNRVKRLLHESFRLLNSN-LRQGYDVVFVARGKIAEADFHTLKE 99
>gi|283851182|ref|ZP_06368465.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
gi|283573351|gb|EFC21328.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
Length = 89
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHF 102
++KK G AV RNR++R L+E RL A G + D V++AK+ D + F + C
Sbjct: 1 MAISKKVGNAVARNRVKRVLRECFRLAAPGAV-GALDIVVVAKKSLDPGLLTFDQACRDL 59
Query: 103 VERVRRNKRSY 113
+ R + +
Sbjct: 60 LPLFGRMAKDF 70
>gi|16081157|ref|NP_391985.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221312088|ref|ZP_03593935.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221316413|ref|ZP_03598218.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221321326|ref|ZP_03602620.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325609|ref|ZP_03606903.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313666|ref|YP_004205953.1| ribonuclease P [Bacillus subtilis BSn5]
gi|585905|sp|P25814|RNPA_BACSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|467389|dbj|BAA05235.1| protein component of ribonuclease P [Bacillus subtilis]
gi|2636652|emb|CAB16142.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. subtilis str.
168]
gi|320019940|gb|ADV94926.1| ribonuclease P [Bacillus subtilis BSn5]
Length = 116
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L L+ ++ L RVG +V+KK G AV RNR++R +++A L + LK DY++IA
Sbjct: 28 FVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNRIKRLIRQAF-LEEKERLKE-KDYIIIA 84
Query: 87 KRDALFIPFKE 97
++ A + ++E
Sbjct: 85 RKPASQLTYEE 95
>gi|242372604|ref|ZP_04818178.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
gi|242349659|gb|EES41260.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
Length = 115
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
NN+ N R+G +V+KK G AV RNR++R ++E ++ + ++ D ++IA++ A
Sbjct: 34 NNSENKHFRLGISVSKKLGNAVTRNRIKRAIRENFKVHKDDII--ARDIIVIARQPA 88
>gi|167759575|ref|ZP_02431702.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC
35704]
gi|167662802|gb|EDS06932.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC
35704]
Length = 113
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F LV K G+ + + + NN R+G +V+KK G ++ R+R+ R ++
Sbjct: 7 LKKNKDFQLVYKCGKSYANKYLVMYIKENNTGK--NRLGISVSKKVGNSIVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G D V+IA+ A +K++
Sbjct: 65 ESYRL-QEDRFRCGIDIVVIARIGAKGRTYKDI 96
>gi|157363656|ref|YP_001470423.1| ribonuclease P protein component [Thermotoga lettingae TMO]
gi|157314260|gb|ABV33359.1| ribonuclease P protein component [Thermotoga lettingae TMO]
Length = 121
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
L +L N R+G V +K G A +RN++RR +KE RL L D V++ ++
Sbjct: 37 LTILYVGNDLEHNRIGVIVKRKFGKAHDRNKIRRWIKEIYRLKKHD-LNKSFDIVVLPRK 95
Query: 89 --DALF--IPFKELCNHFVERVRRNK 110
+F IP++E C H + ++R K
Sbjct: 96 TLSDIFKDIPYEEFCKHLTDLLKRIK 121
>gi|299783734|gb|ADJ41732.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Lactobacillus fermentum CECT 5716]
Length = 82
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV+R ++RR+++ + L + LK D+++IA++ A + KE+ +
Sbjct: 10 RVGISVGKKVGNAVQRGWVKRRIRQTL-LEVKPELKQDVDFLVIARKSAADLSMKEIKKN 68
Query: 102 FV 103
V
Sbjct: 69 LV 70
>gi|580904|emb|CAA44400.1| unnamed protein product [Bacillus subtilis]
Length = 119
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L L+ ++ L RVG +V+KK G AV RNR++R +++A L + LK DY++IA
Sbjct: 31 FVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNRIKRLIRQAF-LEEKERLKEK-DYIIIA 87
Query: 87 KRDALFIPFKE 97
++ A + ++E
Sbjct: 88 RKPASQLTYEE 98
>gi|291461018|ref|ZP_06026478.2| ribonuclease P protein component [Fusobacterium periodonticum
ATCC 33693]
gi|291379417|gb|EFE86935.1| ribonuclease P protein component [Fusobacterium periodonticum
ATCC 33693]
Length = 112
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+SL N N + R GF +KK G A RNR++R +E +RL E L +D +++A
Sbjct: 25 YSLIFFNKNKLDY-SRFGFVASKKIGKAFCRNRIKRLFREYIRLNIEK-LNDNYDIIIVA 82
Query: 87 KRDA 90
K+ A
Sbjct: 83 KKKA 86
>gi|258655510|ref|YP_003204666.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
gi|258558735|gb|ACV81677.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
Length = 130
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLL--PRVGFTVTKKQGCAVERNRMRRR 63
L QFA +V++G P + +L + PRVGF V+ K G AV R+R+ RR
Sbjct: 8 LHTSEQFAAVVRRGSRSAAPRLVVHLLTEHRPGPPADPRVGFVVSGKVGNAVVRHRITRR 67
Query: 64 LKEAVRL-CAEGVLKHGHDYVL 84
L+ VR AE L G D V+
Sbjct: 68 LRALVRPRLAE--LPPGTDVVV 87
>gi|226326144|ref|ZP_03801662.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
gi|225205686|gb|EEG88040.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
Length = 114
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F ++ +KG+ + + +L N+ RVG +V+KK G ++ R+ + R ++
Sbjct: 7 LKKNRDFQSVYRKGKPYGNKYLVMYLLANDLGR--NRVGISVSKKVGNSIIRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E + G+D V+IA+ A + E+
Sbjct: 65 ESYRLHEEQ-FQCGYDIVIIARTTAKDRSYHEI 96
>gi|153815421|ref|ZP_01968089.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC
27756]
gi|317500883|ref|ZP_07959095.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089215|ref|ZP_08338117.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847280|gb|EDK24198.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC
27756]
gi|316897763|gb|EFV19822.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405767|gb|EGG85296.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
Length = 111
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V KKG + + +L N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNRDFQNVYKKGTSFANSYLVMYILENGLQE--NRIGISVSKKVGNSVVRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
E+ RL E + G D V+IA+ A
Sbjct: 65 ESYRLSEEH-FRCGIDIVVIARTSA 88
>gi|229824629|ref|ZP_04450698.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC
51271]
gi|229786000|gb|EEP22114.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC
51271]
Length = 115
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
RVG +V K+ G AV RN+++R L+++++ E + H +DY+LIA+ D
Sbjct: 42 RVGLSVGKRIGNAVMRNKVKRYLRQSLQDL-EHEIPHEYDYLLIARPD 88
>gi|217077889|ref|YP_002335607.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
gi|217037744|gb|ACJ76266.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
Length = 131
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK----RDALFIPFK 96
+ F+V KK G AV+RN+++R ++E VR + K G+DY++I + +D I F
Sbjct: 50 SKFAFSVKKKFGKAVKRNKVKRWMREIVRTNKMNIPK-GYDYLIIVRKMLSKDFEQIQFS 108
Query: 97 ELCNHFVERVRR 108
+ F+E R
Sbjct: 109 QFKEAFLELFER 120
>gi|154483921|ref|ZP_02026369.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
gi|149735412|gb|EDM51298.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
Length = 116
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V KG+ + + + V NN S + R+G +V+KK G +V R+ + R ++
Sbjct: 10 LKKNSDFQNVYVKGKSKANRYLVMYVAQNNLS--INRLGISVSKKVGNSVVRHHLTRLIR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
EA RL + + D V+IA+ A +KE+
Sbjct: 68 EAYRLNS-NMFNSSLDIVVIARNTAKDKTYKEV 99
>gi|120602962|ref|YP_967362.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
gi|120563191|gb|ABM28935.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
Length = 92
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G VT+K G AV+RNR++R L+E RL H +VL D + +P + L
Sbjct: 11 RLGLAVTRKTGTAVQRNRVKRVLREFFRL---------HQHVLPDDADIIAVPKRHL 58
>gi|116510956|ref|YP_808172.1| ribonuclease P [Lactococcus lactis subsp. cremoris SK11]
gi|125623021|ref|YP_001031504.1| ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|123125967|sp|Q032X2|RNPA_LACLS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226721|sp|A2RHL3|RNPA_LACLM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116106610|gb|ABJ71750.1| ribonuclease P protein component [Lactococcus lactis subsp.
cremoris SK11]
gi|124491829|emb|CAL96749.1| Ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|300069768|gb|ADJ59168.1| ribonuclease P [Lactococcus lactis subsp. cremoris NZ9000]
Length = 117
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + LN N + RVG +V+KK G AV RNR++R L+ AV ++ D+V+IA
Sbjct: 30 FVVYKLNTNQPHF--RVGLSVSKKLGHAVLRNRIKRLLRHAVAEFKPYLV--DEDFVIIA 85
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ + F+E+ + + V + + Y G+N
Sbjct: 86 RSGVETLSFEEVKKN-LRHVLKLSKIYVDGEN 116
>gi|157829706|pdb|1A6F|A Chain A, Rnase P Protein From Bacillus Subtilis
Length = 119
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L L+ ++ L RVG +V+KK G AV RNR++R +++A L + LK DY++IA
Sbjct: 31 FVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNRIKRLIRQAF-LEEKERLKEK-DYIIIA 87
Query: 87 KRDALFIPFKE 97
++ A + ++E
Sbjct: 88 RKPASQLTYEE 98
>gi|323141439|ref|ZP_08076329.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
gi|322414095|gb|EFY04924.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
Length = 125
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK ++ F +V KG +L + ++ ++G V KK GCAV RNR++R ++
Sbjct: 21 LKSKKSFQIVYVKGRTVVDAMSVFYILPDQGEDI--KIGLAVGKKLGCAVVRNRVKRLMR 78
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR 88
E R+ + LK G+ V +A++
Sbjct: 79 EVFRM-HKAELKKGYHIVWVARK 100
>gi|184156318|ref|YP_001844658.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227514116|ref|ZP_03944165.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260662536|ref|ZP_05863431.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
gi|238689194|sp|B2GEU6|RNPA_LACF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183227662|dbj|BAG28178.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227087487|gb|EEI22799.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260553227|gb|EEX26170.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
Length = 114
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV+R ++RR+++ + L + LK D+++IA++ A + KE+ +
Sbjct: 42 RVGISVGKKVGNAVQRGWVKRRIRQTL-LEVKPELKQDVDFLVIARKSAADLSMKEIKKN 100
Query: 102 FV 103
V
Sbjct: 101 LV 102
>gi|311233303|gb|ADP86157.1| ribonuclease P protein component [Desulfovibrio vulgaris RCH1]
Length = 129
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L V+ + R+G VT+K G AV+RNR++R L+E RL H +VL
Sbjct: 33 FVLFVMERSADPEGWRLGLAVTRKTGTAVQRNRVKRVLREFFRL---------HQHVLPD 83
Query: 87 KRDALFIPFKEL 98
D + +P + L
Sbjct: 84 DADIIAVPKRHL 95
>gi|312865637|ref|ZP_07725861.1| ribonuclease P protein component [Streptococcus downei F0415]
gi|311098758|gb|EFQ56978.1| ribonuclease P protein component [Streptococcus downei F0415]
Length = 150
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RNR++R+L+ + A + HD+V+IA++ + ++E+
Sbjct: 80 RVGLSVSKKLGNAVVRNRIKRKLRHVLMELAPFLTT--HDFVVIARKGVEELNYQEV 134
>gi|160893414|ref|ZP_02074199.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
gi|156864809|gb|EDO58240.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
Length = 117
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSN LK R+F V + + + L N S R+G +V+KK G +V R+++
Sbjct: 1 MSNFITLKNSREFGSVYNTKDSVANKYLVMYLRAN-SLEYNRLGISVSKKVGNSVVRHKV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R ++EA RL + ++ G+D V +A+ A
Sbjct: 60 TRLIREAYRLNKD-CIRSGYDIVFVARTTA 88
>gi|150019911|ref|YP_001312165.1| ribonuclease P [Clostridium beijerinckii NCIMB 8052]
gi|189043731|sp|A6M3M9|RNPA_CLOB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149906376|gb|ABR37209.1| ribonuclease P protein component [Clostridium beijerinckii NCIMB
8052]
Length = 125
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVL--------NNNNSNLLP--RVGFTVTKKQGCAVE 56
LKK +F +V K +G F+ E+L N + + L +VG +V+KK G +V
Sbjct: 5 LKKNFEFTIVYK----RGKSFANELLVMYILKNRRNKDRDFLAYSKVGISVSKKVGNSVV 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+R +R + E+ RL ++K G+D+V IA+ P + VER R+
Sbjct: 61 RSRCKRLITESFRLNYNYIVK-GYDFVFIARN-----PLQSKSYFEVERAMRS 107
>gi|46579488|ref|YP_010296.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448902|gb|AAS95555.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
Length = 96
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R+G VT+K G AV+RNR++R L+E RL + VL D + + KR
Sbjct: 15 RLGLAVTRKTGTAVQRNRVKRVLREFFRLH-QHVLPDDADIIAVPKR 60
>gi|294781809|ref|ZP_06747142.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
gi|294481919|gb|EFG29687.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
Length = 111
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+SL N N + R GF +KK G A RNR++R +E +RL E L +D +++A
Sbjct: 24 YSLIFFNKNKLDY-SRFGFVASKKIGKAFCRNRIKRLFREYIRLNIEK-LNANYDIIIVA 81
Query: 87 KRDA 90
K+ A
Sbjct: 82 KKKA 85
>gi|217033103|ref|ZP_03438567.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298735586|ref|YP_003728109.1| ribonuclease P protein component [Helicobacter pylori B8]
gi|216945176|gb|EEC23867.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298354773|emb|CBI65645.1| ribonuclease P protein component [Helicobacter pylori B8]
Length = 161
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 30/124 (24%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-------------------NSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + + L +G +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLK----EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V+KK G AV+RN ++RRL+ + V LC G V + + D + F L HF
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLALKHVALC------QGLALVFVPRSDCYHLDFWALEKHF 132
Query: 103 VERV 106
+E +
Sbjct: 133 LEML 136
>gi|269122889|ref|YP_003305466.1| ribonuclease P protein component [Streptobacillus moniliformis
DSM 12112]
gi|268314215|gb|ACZ00589.1| ribonuclease P protein component [Streptobacillus moniliformis
DSM 12112]
Length = 109
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF +KK G +V R+R +R L+EA RL + + + +YVL+AK
Sbjct: 35 QRLGFVASKKTGNSVYRSRAKRLLREAARLNID-LFRLDKEYVLVAK 80
>gi|331092110|ref|ZP_08340941.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402311|gb|EGG81882.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
Length = 130
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSL-EVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKK R F +V K+G+ + + + N N N R+G +V+KK G +V R+R+ R +
Sbjct: 7 LKKNRDFQIVYKRGKSYANKYLVMYKKPNGLNKN---RIGISVSKKVGNSVVRHRLTRLI 63
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+E+ RL E ++ G+D V+I + A + E+ + +
Sbjct: 64 RESYRL-QESKMQCGYDIVVIVRASANGKSYGEMDSALI 101
>gi|237738567|ref|ZP_04569048.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
gi|229424050|gb|EEO39097.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
Length = 111
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+SL N N + R GF +KK G A RNR++R +E +RL E L +D +++A
Sbjct: 24 YSLIFFNKNKLDY-SRFGFVASKKIGKAFCRNRIKRLFREYIRLNIEK-LNANYDIIIVA 81
Query: 87 KRDA 90
K+ A
Sbjct: 82 KKKA 85
>gi|86610361|ref|YP_479123.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500626|sp|Q2JHS3|RNPA_SYNJB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|86558903|gb|ABD03860.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 133
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSL--EVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRR 62
L+ RR F AL + G+ R G +L + + + +VG + +K AV+RNR+RR
Sbjct: 8 LRDRRAFQALYQGGQRRSGAGLTLLFQPMPAGCEGIPSQVGLVIGRKVSKSAVKRNRLRR 67
Query: 63 RLKEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+L+E +R LC LK G+ + I+K + L + EL
Sbjct: 68 QLREILRPLCPN--LKPGYRLLFISKANLLTYRWPEL 102
>gi|239616664|ref|YP_002939986.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
gi|239505495|gb|ACR78982.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
Length = 134
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+K+ F V K+G + + FF VL N R+G +V KK G A +RNR+RR +K
Sbjct: 14 LRKKADFDRVFKQGNVVQDNFFV--VLYVRNGLPFSRIGVSVKKKFGKAHDRNRLRRIVK 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E R L G+D ++IA+ KEL + F
Sbjct: 72 EIFRKNKSAFLP-GYDILVIAR--------KELSDSF 99
>gi|325915703|ref|ZP_08178008.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
gi|325538120|gb|EGD09811.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
Length = 159
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 30 VRTRAQYTVVFDTARRTSDPLLSLHWRTGDTP---PRLGMAVSRKVDTRAVGRNRIKRVL 86
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 87 RDAMRHLLPDLA--GGDYVIVARSAAAKATNPQIRDAFVRLLRR 128
>gi|255020156|ref|ZP_05292225.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
gi|254970298|gb|EET27791.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
Length = 114
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 16 VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+ +G R P + VL N+ R+G V++K G AV RNR++RRL+EA R
Sbjct: 26 LSEGRKRSFPELACYVLANDRG--FARLGLAVSRKVGNAVLRNRVKRRLREAFRQSP--W 81
Query: 76 LKHGHDYVLIAK 87
G D +++AK
Sbjct: 82 RDQGKDLMVVAK 93
>gi|160944269|ref|ZP_02091498.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
gi|158444451|gb|EDP21455.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
Length = 166
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P L VL N RVG T TKK G AV+RNR RR +K A+ + + G+D +
Sbjct: 56 PALVLYVLKTRGRNT--RVGLTATKKIGHAVQRNRARRVMKAAIDEHLDYNI-GGYDLIF 112
Query: 85 IAK 87
+A+
Sbjct: 113 VAR 115
>gi|78050042|ref|YP_366217.1| ribonuclease P [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|294627439|ref|ZP_06706023.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|123583681|sp|Q3BLZ6|RNPA_XANC5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78038472|emb|CAJ26217.1| ribonuclease P, protein component [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598260|gb|EFF42413.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 145
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 16 VRTRAQYTIVFDTARRTSDPLLSLHWRTGDTP---PRLGMAVSRKVDTRAVGRNRIKRVL 72
Query: 65 KEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R L E G DYV++A+ A ++ + FV +RR
Sbjct: 73 RDAMRHLLPE---LAGGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|21672308|ref|NP_660375.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|266949|sp|P29433|RNPA_BUCAP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|144147|gb|AAA73147.1| rnpA [Buchnera aphidicola]
gi|2827012|gb|AAC38104.1| RNase P protein component [Buchnera aphidicola]
gi|21622907|gb|AAM67586.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 114
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 37 SNLL--PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
SNLL PR+G ++++K A RN+++R ++E RL ++ D+V+IAK++ +++
Sbjct: 39 SNLLGHPRLGLSISRKNIKHAYRRNKIKRLIRETFRLLQHRLI--SMDFVVIAKKNIVYL 96
Query: 94 PFKELCN 100
K++ N
Sbjct: 97 NNKKIVN 103
>gi|269468579|gb|EEZ80228.1| RNase P protein component [uncultured SUP05 cluster bacterium]
Length = 113
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
ILK + K G+L KG ++ + SN PR+G ++KK AV+RNR +R
Sbjct: 11 ILKAHEYAHIFKGGKLAKGSYWQVIAKPIKKSN--PRLGLAISKKVHRLAVDRNRFKRIA 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL---FIPFKELCNHF 102
+E R C + LK+ D+V++A++ FI EL + F
Sbjct: 69 RETFR-CEKNNLKNW-DFVVMARKSRPAKNFILSNELIDLF 107
>gi|281357988|ref|ZP_06244473.1| Glycoside hydrolase family 42 domain protein [Victivallis
vadensis ATCC BAA-548]
gi|281315646|gb|EFA99674.1| Glycoside hydrolase family 42 domain protein [Victivallis
vadensis ATCC BAA-548]
Length = 849
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQG 52
L+K + L GE++ G FF L +L N+ +LLPR+G+T T G
Sbjct: 26 LQKSNAYTLELDGEMQPGRNFFPLSILRNDEMDLLPRLGYTFTDGGG 72
>gi|171779010|ref|ZP_02920018.1| hypothetical protein STRINF_00893 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171282368|gb|EDT47793.1| hypothetical protein STRINF_00893 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 119
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ KG F L L N S+ RVG +V+KK G AV RN ++R+++ + +
Sbjct: 15 AIFSKGTSVANRKFVLYHLEKNQSHY--RVGLSVSKKLGNAVTRNSIKRKIRHVIMELSP 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKEL 98
+L D+V+IA++ + + E+
Sbjct: 73 NLL--NQDFVIIARKGVEELDYHEV 95
>gi|289436081|ref|YP_003465953.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172325|emb|CBH28871.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|313635502|gb|EFS01737.1| ribonuclease P protein component [Listeria seeligeri FSL N1-067]
gi|313640129|gb|EFS04746.1| ribonuclease P protein component [Listeria seeligeri FSL S4-171]
Length = 119
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R +++ EG + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQTFHEL-EGQINPENEYIIIARKPAANMDFHEV 97
>gi|15672110|ref|NP_266284.1| ribonuclease P [Lactococcus lactis subsp. lactis Il1403]
gi|281490608|ref|YP_003352588.1| ribonuclease P [Lactococcus lactis subsp. lactis KF147]
gi|13878722|sp|Q9CJ73|RNPA_LACLA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12722976|gb|AAK04226.1|AE006251_2 ribonuclease P protein component [Lactococcus lactis subsp. lactis
Il1403]
gi|281374414|gb|ADA63943.1| Ribonuclease P, protein component [Lactococcus lactis subsp. lactis
KF147]
Length = 117
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + LN N + RVG +V+KK G AV RNR++R L+ A+ + D+V+IA
Sbjct: 30 FVVYKLNTNQPHF--RVGLSVSKKLGHAVLRNRIKRLLRHAIAEFKPYLT--DEDFVIIA 85
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ + F+E+ + ++ V + + Y G+N
Sbjct: 86 RSGVETLSFEEVKKN-LKHVLKLSKIYVDGEN 116
>gi|294665121|ref|ZP_06730424.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292605122|gb|EFF48470.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 146
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 16 VRTRAQYTIVFDTARRTSDPLLSLHWRTGDTP---PRLGMAVSRKVDTRAVGRNRIKRVL 72
Query: 65 KEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R L E G DYV++A+ A ++ + FV +RR
Sbjct: 73 RDAMRHLLPELA---GGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|116493572|ref|YP_805307.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
gi|122264964|sp|Q03D57|RNPA_PEDPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116103722|gb|ABJ68865.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
Length = 119
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V KK G AV RN +RR+++++ L + +L+ D+++IA+ A +P E+
Sbjct: 42 RVGISVGKKIGNAVMRNYTKRRIRQSI-LEFKPLLRQDVDFLVIARPQASGLPMNEV 97
>gi|326405711|gb|ADZ62782.1| ribonuclease P protein component [Lactococcus lactis subsp. lactis
CV56]
Length = 117
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + LN N + RVG +V+KK G AV RNR++R L+ A+ + D+V+IA
Sbjct: 30 FVVYKLNTNQPHF--RVGLSVSKKLGHAVLRNRIKRLLRHAIAEFKPYLT--DEDFVIIA 85
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ + F+E+ + ++ V + + Y G+N
Sbjct: 86 RSGVETLSFEEVKKN-LKHVLKLSKIYVDGEN 116
>gi|109946794|ref|YP_664022.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
gi|123173592|sp|Q17ZA3|RNPA_HELAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|109714015|emb|CAJ99023.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
Length = 153
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
K PFF + + S LL G +V+KK G AV+RN ++RRL+ V L G
Sbjct: 55 KNPFFC-RLKDTEKSCLL---GLSVSKKVGNAVKRNLIKRRLRSLV--LKHASLCQGFAL 108
Query: 83 VLIAKRDALFIPFKELCNHFVERV 106
V + K+D + F L HF+E +
Sbjct: 109 VFVPKKDCERLDFLTLEKHFLEML 132
>gi|296330035|ref|ZP_06872519.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676759|ref|YP_003868431.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153074|gb|EFG93939.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305415003|gb|ADM40122.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 116
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L L+ ++ L RVG +V+KK G AV RNR++R +++A E DY++IA
Sbjct: 28 FVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNRIKRLIRQA--FLEEKEKLKEKDYIIIA 84
Query: 87 KRDALFIPFKE 97
++ A + ++E
Sbjct: 85 RKPASQLTYEE 95
>gi|323341097|ref|ZP_08081345.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
gi|323091518|gb|EFZ34142.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
Length = 121
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++++ LK D+++IA+ F+ E+ H
Sbjct: 42 RVGISVGKKIGNAVARNWVKRRIRQSLTELKPQ-LKQDCDFIVIARPGVAFMSTAEVKQH 100
Query: 102 FV 103
+
Sbjct: 101 LI 102
>gi|56422032|ref|YP_149350.1| ribonuclease P [Geobacillus kaustophilus HTA426]
gi|261420906|ref|YP_003254588.1| ribonuclease P [Geobacillus sp. Y412MC61]
gi|297531690|ref|YP_003672965.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|319768576|ref|YP_004134077.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
gi|67461269|sp|Q5KU54|RNPA_GEOKA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56381874|dbj|BAD77782.1| ribonuclease P (protein component) [Geobacillus kaustophilus
HTA426]
gi|261377363|gb|ACX80106.1| ribonuclease P protein component [Geobacillus sp. Y412MC61]
gi|297254942|gb|ADI28388.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|317113442|gb|ADU95934.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
Length = 121
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RNR++R +++ E + G DYV+IA++ + + E+
Sbjct: 42 RIGLSVSKKLGKAVVRNRIKRYIRQCFLELKEEIAP-GKDYVVIARQPVAEMNYAEVKKS 100
Query: 102 FVERVRRN 109
+ +R++
Sbjct: 101 LIHVLRKS 108
>gi|301064568|ref|ZP_07204964.1| ribonuclease P protein component [delta proteobacterium NaphS2]
gi|300441316|gb|EFK05685.1| ribonuclease P protein component [delta proteobacterium NaphS2]
Length = 111
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
++ N + R+G T ++K G AV RNR +R ++E RL + G D V+IAK+ A
Sbjct: 36 AVSGKNELGITRLGVTASRKVGNAVRRNRAKRLIREFYRL-HKACFPKGVDIVVIAKKGA 94
Query: 91 LFIPFKE 97
++ + E
Sbjct: 95 GYLNYHE 101
>gi|302672312|ref|YP_003832272.1| ribonuclease P protein component RnpA [Butyrivibrio
proteoclasticus B316]
gi|302396785|gb|ADL35690.1| ribonuclease P protein component RnpA [Butyrivibrio
proteoclasticus B316]
Length = 116
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + + G+ + L V N S+ ++G + +KK G ++ R+R R ++
Sbjct: 7 MKKTSEFRNVYENGKSYANKYIVLYVWENGRSD--NKLGISCSKKIGNSIVRHRFARLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKE 97
E+ RL E V G D V++A+ RDA F +E
Sbjct: 65 ESYRL-QENVFNSGLDIVIVARACARDASFFDIQE 98
>gi|291561649|emb|CBL40448.1| ribonuclease P protein component [butyrate-producing bacterium
SS3/4]
Length = 114
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V ++G+ + + V+++ + R+G + +KK G +V R+R R ++
Sbjct: 7 LKKNQDFQTVYRRGKSYANKYLVMYVMDSGRED--TRIGISASKKVGNSVVRHRFARLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
E+ RL + +L+ G D +++A+ A F ++ + F+
Sbjct: 65 ESFRLNKD-ILEEGKDIIVVARAAAKDKNFDKIESAFL 101
>gi|168698919|ref|ZP_02731196.1| ribonuclease P protein component [Gemmata obscuriglobus UQM 2246]
Length = 163
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
PR+G +V++K G AV RNR +R +EA RL ++ L G D +LI + P+ EL
Sbjct: 45 PRLGCSVSRKVGNAVMRNRYKRLFREAFRL-SQHDLPQGVDLILIPRPG----PYPEL 97
>gi|291521108|emb|CBK79401.1| ribonuclease P protein component [Coprococcus catus GD/7]
Length = 119
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V G+ R + + V+ N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNRDFKTVYGNGKSRANKYLVMYVMKNGTEK--NRIGISVSKKVGNSVVRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E RL E K G D + I + +A I + L
Sbjct: 65 EIYRLN-EHHFKKGLDIIFIVRVNAKKIDYHTL 96
>gi|153212959|ref|ZP_01948553.1| ribonuclease P protein component [Vibrio cholerae 1587]
gi|124116185|gb|EAY35005.1| ribonuclease P protein component [Vibrio cholerae 1587]
Length = 118
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ NN S+ PR+G V KKQ AV RNR +R +E+ RL + D+
Sbjct: 30 SPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRVCRESFRLHQNQLA--NKDF 85
Query: 83 VLIAKRDALFIPFKELCN 100
V+IAK+ A + +EL N
Sbjct: 86 VVIAKKSAQDLSNEELFN 103
>gi|330447271|ref|ZP_08310921.1| ribonuclease P protein component [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491462|dbj|GAA05418.1| ribonuclease P protein component [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 107
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N PR+G V KKQ AV+RNR +R ++E+ RL + D+V+IAK
Sbjct: 22 LTILARSNELNCPRLGLAVPKKQIKNAVDRNRFKRIVRESFRLKQHQL--PAKDFVVIAK 79
Query: 88 RDA 90
+ A
Sbjct: 80 KSA 82
>gi|117927033|ref|YP_867650.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
gi|117610789|gb|ABK46244.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
Length = 130
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ S PRVG TV++K G A RNR++R +E R L G D+VLIA+
Sbjct: 51 DGSGADPRVGLTVSRKVGKAYVRNRIKRVARELFR-SNRQRLAFGRDFVLIAR 102
>gi|255994569|ref|ZP_05427704.1| ribonuclease P protein component [Eubacterium saphenum ATCC 49989]
gi|255993282|gb|EEU03371.1| ribonuclease P protein component [Eubacterium saphenum ATCC 49989]
Length = 114
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + IL+K+ +F+ + KG+ + + + N R F +KK G +VERNR
Sbjct: 1 MLDKTILRKQNEFSKIYNKGKTITSEYVVVFYIKNELG--YNRRAFIASKKIGNSVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR ++E R ++ K DY+ +AKR + K+ +H VE+
Sbjct: 59 ARRLIREFYRKNSDN-FKKSCDYIFVAKRKMI---LKKAKSHDVEK 100
>gi|238926595|ref|ZP_04658355.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
gi|238885541|gb|EEQ49179.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
Length = 135
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++K+R F V +KG G L VL + + +VGF KK GCA RNR +R L
Sbjct: 20 MIKRRSDFQCVYQKGHSAAGRHMILYVLRD--PRVAGKVGFAAGKKLGCAAVRNRTKRLL 77
Query: 65 KEAVR 69
+EA R
Sbjct: 78 REAYR 82
>gi|327438164|dbj|BAK14529.1| RNase P protein component [Solibacillus silvestris StLB046]
Length = 113
Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
R+G +V+KK G AV R +++R +++A L + +K DYV+IA+ A + F E
Sbjct: 42 RIGLSVSKKVGNAVTRVQVKRYIRQAF-LELKDEVKQDMDYVIIARTQAATLDFHE 96
>gi|332672292|ref|YP_004455300.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
gi|332341330|gb|AEE47913.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
Length = 122
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
P VG V+K G AV RN ++RRL+E VR + VL G V+ A A PF +L
Sbjct: 44 PVVGLVVSKAVGTAVRRNLVKRRLRELVRARLD-VLPAGSRIVVRALPPAAGAPFAQL 100
>gi|312728|emb|CAA78594.1| RNAse P [Bacillus subtilis subsp. subtilis str. 168]
Length = 83
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
RVG +V+KK G AV RNR++R +++A L + LK DY++IA++ A + ++E
Sbjct: 9 RVGLSVSKKIGNAVMRNRIKRLIRQAF-LEEKERLKE-KDYIIIARKPASQLTYEE 62
>gi|15640038|ref|NP_062590.1| ribonuclease P [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591468|ref|ZP_01678741.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|147674882|ref|YP_001218406.1| ribonuclease P [Vibrio cholerae O395]
gi|153819846|ref|ZP_01972513.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|153821956|ref|ZP_01974623.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|153830820|ref|ZP_01983487.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|227080243|ref|YP_002808794.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|229508292|ref|ZP_04397796.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229508869|ref|ZP_04398360.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229515954|ref|ZP_04405411.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229517140|ref|ZP_04406586.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229520179|ref|ZP_04409606.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229524908|ref|ZP_04414313.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229530207|ref|ZP_04419596.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229606566|ref|YP_002877214.1| ribonuclease P [Vibrio cholerae MJ-1236]
gi|254226945|ref|ZP_04920511.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|254291133|ref|ZP_04961930.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|254851571|ref|ZP_05240921.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297581959|ref|ZP_06943879.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|298501192|ref|ZP_07010991.1| ribonuclease P [Vibrio cholerae MAK 757]
gi|13878727|sp|Q9KVY2|RNPA_VIBCH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|172047496|sp|A5F483|RNPA_VIBC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808097|sp|C3LP79|RNPA_VIBCM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9654397|gb|AAF93184.1| ribonuclease P protein component [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546670|gb|EAX56852.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|125620550|gb|EAZ48918.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|126509607|gb|EAZ72201.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|126520495|gb|EAZ77718.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|146316765|gb|ABQ21304.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|148873704|gb|EDL71839.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|150422978|gb|EDN14928.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|227008131|gb|ACP04343.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|227011991|gb|ACP08201.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|229332340|gb|EEN97827.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229338489|gb|EEO03506.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229342773|gb|EEO07764.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229346203|gb|EEO11175.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229347054|gb|EEO12016.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229354144|gb|EEO19076.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229354565|gb|EEO19487.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229369221|gb|ACQ59644.1| ribonuclease P protein component [Vibrio cholerae MJ-1236]
gi|254847276|gb|EET25690.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297533826|gb|EFH72667.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|297540064|gb|EFH76126.1| ribonuclease P [Vibrio cholerae MAK 757]
Length = 118
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ NN S+ PR+G V KKQ AV RNR +R +E+ RL + D+
Sbjct: 30 SPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRICRESFRLHQNQLA--NKDF 85
Query: 83 VLIAKRDALFIPFKELCN 100
V+IAK+ A + +EL N
Sbjct: 86 VVIAKKSAQDLSNEELFN 103
>gi|270293446|ref|ZP_06199654.1| ribonuclease P protein component [Streptococcus sp. M143]
gi|270278108|gb|EFA23957.1| ribonuclease P protein component [Streptococcus sp. M143]
Length = 123
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L N S+ RVG +V+KK G AV RN+++RR++ + L L D+V+IA
Sbjct: 28 FVVYQLENQKSHF--RVGLSVSKKLGNAVTRNQIKRRIRH-ILLSVREQLADNVDFVVIA 84
Query: 87 KRDALFIPFKEL 98
++ + + E+
Sbjct: 85 RKGVEGLDYAEM 96
>gi|289612939|emb|CBI59987.1| unnamed protein product [Sordaria macrospora]
Length = 83
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 10/51 (19%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE-----GVLKHGHDYVLIAK 87
R+G TV+KK G AV RNRM+RR + L AE G++ G D+VLI +
Sbjct: 24 RIGITVSKKVGNAVVRNRMKRRFRA---LAAEMLPDLGIV--GADHVLIGR 69
>gi|254937490|ref|ZP_05269187.1| ribonuclease P protein component [Listeria monocytogenes F6900]
gi|258610092|gb|EEW22700.1| ribonuclease P protein component [Listeria monocytogenes F6900]
Length = 120
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 29 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIA 86
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 87 RKPAANMDFHEV 98
>gi|320547571|ref|ZP_08041856.1| ribonuclease P protein component [Streptococcus equinus ATCC
9812]
gi|320447646|gb|EFW88404.1| ribonuclease P protein component [Streptococcus equinus ATCC
9812]
Length = 119
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ KG F L L N S+ RVG +V+KK G AV RN ++R+++ + +
Sbjct: 15 AIFSKGSSVANRKFVLYHLEKNQSHY--RVGLSVSKKLGNAVTRNNIKRKIRHVIMELSP 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKEL 98
++ D+V+IA++ + + E+
Sbjct: 73 NLI--NQDFVIIARKGVEELDYHEV 95
>gi|212640680|ref|YP_002317200.1| ribonuclease P [Anoxybacillus flavithermus WK1]
gi|226736851|sp|B7GMW3|RNPA_ANOFW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|212562160|gb|ACJ35215.1| RNase P protein component [Anoxybacillus flavithermus WK1]
Length = 112
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F V K+G F L VL+ L R+G +V+KK G AV RNR++R ++
Sbjct: 7 IKKNEEFQEVFKRGTSVANRQFVLYVLDKP-EQLYFRIGLSVSKKIGKAVVRNRVKRYIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + + + G DYV+IA+ + ++E + +RR
Sbjct: 66 QVFHEERDRI-EIGKDYVIIARMPVATMEYEEAKKSLLHVLRR 107
>gi|328468320|gb|EGF39326.1| ribonuclease P [Listeria monocytogenes 1816]
Length = 120
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 29 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIA 86
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 87 RKPAANMDFHEV 98
>gi|325265445|ref|ZP_08132168.1| ribonuclease P protein component [Clostridium sp. D5]
gi|324029303|gb|EGB90595.1| ribonuclease P protein component [Clostridium sp. D5]
Length = 113
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V K G + + V+ N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNKDFQIVYKNGRSYANKYLVMYVMENGLDK--NRLGISVSKKVGNSVVRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
E+ RL E + G D V+IA+ A
Sbjct: 65 ESYRLLEEH-FQSGLDIVVIARVSA 88
>gi|16804892|ref|NP_466377.1| ribonuclease P [Listeria monocytogenes EGD-e]
gi|46909043|ref|YP_015432.1| ribonuclease P [Listeria monocytogenes serotype 4b str. F2365]
gi|47093224|ref|ZP_00230997.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|47097240|ref|ZP_00234802.1| ribonuclease P protein component [Listeria monocytogenes str.
1/2a F6854]
gi|224503079|ref|ZP_03671386.1| ribonuclease P [Listeria monocytogenes FSL R2-561]
gi|226225404|ref|YP_002759511.1| ribonuclease P protein component [Listeria monocytogenes
Clip81459]
gi|254824782|ref|ZP_05229783.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|254827422|ref|ZP_05232109.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|254899688|ref|ZP_05259612.1| ribonuclease P [Listeria monocytogenes J0161]
gi|254913109|ref|ZP_05263121.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|254930871|ref|ZP_05264230.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|255520072|ref|ZP_05387309.1| ribonuclease P [Listeria monocytogenes FSL J1-175]
gi|284800258|ref|YP_003412123.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284993443|ref|YP_003415211.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|300763387|ref|ZP_07073385.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|21263942|sp|Q8Y3I1|RNPA_LISMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390484|sp|Q71VQ7|RNPA_LISMF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494111|sp|C1L0I8|RNPA_LISMC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16412355|emb|CAD01068.1| ribonuclease P protein component [Listeria monocytogenes EGD-e]
gi|46882316|gb|AAT05609.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. F2365]
gi|47014395|gb|EAL05366.1| ribonuclease P protein component [Listeria monocytogenes str.
1/2a F6854]
gi|47018418|gb|EAL09178.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|225877866|emb|CAS06581.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258599800|gb|EEW13125.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|284055820|gb|ADB66761.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284058910|gb|ADB69849.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|293582416|gb|EFF94448.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|293591111|gb|EFF99445.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|293594021|gb|EFG01782.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|300515664|gb|EFK42713.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|332313284|gb|EGJ26379.1| Ribonuclease P protein component [Listeria monocytogenes str.
Scott A]
Length = 119
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 28 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIA 85
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 86 RKPAANMDFHEV 97
>gi|159897295|ref|YP_001543542.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
gi|238687060|sp|A9AXK0|RNPA_HERA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159890334|gb|ABX03414.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
Length = 123
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ R F V++G P L V + + R G V K G AVERNR +R+++
Sbjct: 7 LRSPRDFRRVREGGRTWSHPLLVLSVAPARANRV--RCGIVVRKSLGTAVERNRYKRQVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAK 87
EA RL + + + G D + I +
Sbjct: 65 EATRLVYDQI-RPGWDVIFIVR 85
>gi|152986774|ref|YP_001351681.1| ribonuclease P [Pseudomonas aeruginosa PA7]
gi|166226732|sp|A6VF46|RNPA_PSEA7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150961932|gb|ABR83957.1| ribonuclease P protein component [Pseudomonas aeruginosa PA7]
Length = 135
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E + G D V+IA++ + EL F
Sbjct: 76 HNQEALA--GWDIVMIARKGLGELENPELHQQF 106
>gi|319651098|ref|ZP_08005232.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
gi|317397268|gb|EFV77972.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
Length = 90
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RN+++R +++A L E +K +D ++IA++ + F E+
Sbjct: 10 RIGLSVSKKIGNAVMRNQIKRYIRQAF-LELEEEIKPQYDLIVIARKPVAEMDFHEV 65
>gi|303325517|ref|ZP_07355960.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
gi|302863433|gb|EFL86364.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
Length = 127
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++R +F A ++G F L VL + R G V++K G AV RNR++R L+
Sbjct: 12 VRRRAEFTACYERGRRYHTEHFLLFVLPREHVGDCTRTGMAVSRKVGNAVVRNRVKRLLR 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR----DAL 91
E RL ++ + H D V +AKR DAL
Sbjct: 72 EFFRLHSDLLPVHA-DLVAVAKRHTGGDAL 100
>gi|255746811|ref|ZP_05420757.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262155891|ref|ZP_06029013.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|262167095|ref|ZP_06034810.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|255735568|gb|EET90967.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262024481|gb|EEY43167.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|262030343|gb|EEY48985.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|327482919|gb|AEA77326.1| Ribonuclease P protein component [Vibrio cholerae LMA3894-4]
Length = 107
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ NN S+ PR+G V KKQ AV RNR +R +E+ RL + D+
Sbjct: 19 SPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRICRESFRLHQNQLA--NKDF 74
Query: 83 VLIAKRDALFIPFKELCN 100
V+IAK+ A + +EL N
Sbjct: 75 VVIAKKSAQDLSNEELFN 92
>gi|328905783|gb|EGG25559.1| ribonuclease P protein component [Propionibacterium sp. P08]
Length = 95
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
GP S + ++ + PRVGF V+K G AV RNR++RRL+
Sbjct: 8 GPLASTTT-SRSDLGVTPRVGFVVSKAVGNAVTRNRVKRRLR 48
>gi|258611657|ref|ZP_05711587.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
gi|258605136|gb|EEW17744.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
Length = 109
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 18 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIA 75
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 76 RKPAANMDFHEV 87
>gi|304414289|ref|ZP_07395657.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
gi|304283503|gb|EFL91899.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
Length = 114
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
PR+GF + KKQ A ERNR+RR ++E+ RL + D+V++AK+ A+
Sbjct: 45 PRIGFAIAKKQIKRAHERNRIRRLIRESFRLRQHQL--PSMDFVVLAKKGAV 94
>gi|224498309|ref|ZP_03666658.1| ribonuclease P [Listeria monocytogenes Finland 1988]
gi|254991920|ref|ZP_05274110.1| ribonuclease P [Listeria monocytogenes FSL J2-064]
Length = 121
Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 30 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIA 87
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 88 RKPAANMDFHEV 99
>gi|302535575|ref|ZP_07287917.1| ribonuclease P protein component [Streptomyces sp. C]
gi|302444470|gb|EFL16286.1| ribonuclease P protein component [Streptomyces sp. C]
Length = 124
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+++ PR GF V+K G AV RNR++RRL+ VR
Sbjct: 45 GDADPSPRAGFVVSKAVGIAVVRNRVKRRLRHLVR 79
>gi|225575688|ref|ZP_03784298.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
gi|225037092|gb|EEG47338.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
Length = 113
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F +V + G + + VL N R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNRDFQIVYRCGTSLANRYLVMYVLENELKK--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA 90
E RL E + G+D V+IA+ A
Sbjct: 65 ECYRL-NESRFQVGYDIVVIARVSA 88
>gi|225570323|ref|ZP_03779348.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
gi|225160855|gb|EEG73474.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNKDFQTVYNKGISYANKYLVMYVMENHTER--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
E+ RL E + G D ++IA+ A +KE+ +
Sbjct: 65 ESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVS 98
>gi|293374953|ref|ZP_06621249.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325844330|ref|ZP_08168106.1| ribonuclease P protein component [Turicibacter sp. HGF1]
gi|292646430|gb|EFF64444.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325489197|gb|EGC91579.1| ribonuclease P protein component [Turicibacter sp. HGF1]
Length = 113
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 15 LVKKGELRKGPFFSL-EVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
++K G + P+F + + +N N R+ +V KK G AVERN+++R ++ V +
Sbjct: 16 VMKNGRSKANPYFIVYKYKKTDNENF--RIAISVGKKIGNAVERNKVKRYIRN-VTTEHK 72
Query: 74 GVLKHGHDYVLIAK---RDALFIPFKE 97
+ +DY +IA+ ++ ++ FKE
Sbjct: 73 QTIDSNYDYFVIARKGVKELDYVSFKE 99
>gi|218894671|ref|YP_002443541.1| ribonuclease P [Pseudomonas aeruginosa LESB58]
gi|226736872|sp|B7V7A6|RNPA_PSEA8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218774900|emb|CAW30719.1| ribonuclease P protein component [Pseudomonas aeruginosa LESB58]
Length = 135
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V + K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPIGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E + G D V+IA++ + EL F
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQF 106
>gi|116874194|ref|YP_850975.1| ribonuclease P [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466740|sp|A0AMG4|RNPA_LISW6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116743072|emb|CAK22196.1| ribonuclease P protein component [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 119
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 28 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-EDQINPENEYIIIA 85
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 86 RKPAANMDFHEV 97
>gi|296273899|ref|YP_003656530.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM
7299]
gi|296098073|gb|ADG94023.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM
7299]
Length = 111
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
+GF +KK G AV RN+ RRRL+ A+ L E ++ G YV +AK D LF
Sbjct: 43 IGFVTSKKVGNAVFRNKARRRLR-AIVLENENIIITGK-YVFVAK-DELF 89
>gi|311070646|ref|YP_003975569.1| ribonuclease P [Bacillus atrophaeus 1942]
gi|310871163|gb|ADP34638.1| ribonuclease P [Bacillus atrophaeus 1942]
Length = 115
Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L VL+ ++ R G +V+KK G AV RNR++R +++ ++ + + DY++IA
Sbjct: 28 FVLYVLDQPEADEF-RAGLSVSKKIGNAVVRNRVKRLIRQVLQDEKDKL--KQKDYIIIA 84
Query: 87 KRDALFIPFKE 97
++ A + F+E
Sbjct: 85 RKPASQLTFEE 95
>gi|261250644|ref|ZP_05943219.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
gi|260939213|gb|EEX95200.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
Length = 107
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F+ ++ NS PR+G V KKQ AV RNR +R +E+ R + L H DY
Sbjct: 19 SPHFT--IIARKNSLSHPRLGLAVPKKQIKTAVGRNRFKRLARESFR-NNQHQLAHK-DY 74
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 75 VVIAKKTA 82
>gi|229829516|ref|ZP_04455585.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
gi|229791947|gb|EEP28061.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
Length = 120
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V++K G +V R+ + R ++EA RL E + G D V++A++ A F ++ +
Sbjct: 45 RLGISVSRKVGNSVVRHHLTRLIREAYRLH-EASFQIGWDMVVVARKQAGDADFHQMESA 103
Query: 102 FVERVRRNK 110
F+ R K
Sbjct: 104 FLHIARLQK 112
>gi|73663754|ref|YP_302535.1| ribonuclease P [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72496269|dbj|BAE19590.1| ribonuclease P protein component [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 115
Score = 37.4 bits (85), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R+G +V+KK G AV RNR++R ++E ++ E +L D ++IA++ A
Sbjct: 43 RLGISVSKKLGNAVVRNRIKRAIRENFKIHKEDIL--PMDIIVIARQPA 89
>gi|328471233|gb|EGF42135.1| ribonuclease P [Vibrio parahaemolyticus 10329]
Length = 118
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNKLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNSQHQLP--NKDF 85
Query: 83 VLIAKRDALFIPFKELCNHF 102
V+IAK+ A + +E+ F
Sbjct: 86 VVIAKKSAQDLSNEEILKLF 105
>gi|163791582|ref|ZP_02185984.1| ribonuclease P [Carnobacterium sp. AT7]
gi|159873160|gb|EDP67262.1| ribonuclease P [Carnobacterium sp. AT7]
Length = 112
Score = 37.4 bits (85), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + VL+ N+ L RVG +V KK G AV RN ++RR+++++ LK D+++IA
Sbjct: 28 FVIYVLDKND-QLHFRVGISVGKKIGNAVMRNNVKRRIRQSLTELKPQ-LKAEKDFIVIA 85
Query: 87 KRDALFIPFKE 97
++ + KE
Sbjct: 86 RKPIADMTMKE 96
>gi|222056915|ref|YP_002539277.1| ribonuclease P protein component [Geobacter sp. FRC-32]
gi|221566204|gb|ACM22176.1| ribonuclease P protein component [Geobacter sp. FRC-32]
Length = 119
Score = 37.4 bits (85), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L KR QF V ++ F L +++ + ++G TV++K G AV RNR+RR +
Sbjct: 16 LLKRSQFLHVSDAGKKIHTAHFIILGLVSAD----WTKIGITVSRKVGNAVCRNRIRRLV 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E RL + Y +IAKR A + ++++C + R
Sbjct: 72 REFYRLNKQHFAVAY--YNIIAKRGAEQLNYQQVCRELANALER 113
>gi|311897305|dbj|BAJ29713.1| putative ribonuclease P protein component [Kitasatospora setae
KM-6054]
Length = 142
Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSL--------EVLNNNNSNLLP---------RVGFTVT 48
L++R+ FA VK+G P + E ++ NS+ P R GF V+
Sbjct: 8 LRRRQDFAAAVKRGRRAGRPLLVVHLQREAVPEAGSDRNSDSRPHVAEGLPPARAGFVVS 67
Query: 49 KKQGCAVERNRMRRRLKEAV--RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
K G AV RN ++RRL+ V RL L G V+ A A P+ +L + +
Sbjct: 68 KAVGPAVVRNAVKRRLRHLVGERLSR---LPAGSLIVVRALPAAATAPYPDLAHDLDAAL 124
Query: 107 RRNKRSYYSG 116
RR RS +G
Sbjct: 125 RRVLRSEPAG 134
>gi|56461739|ref|YP_157020.1| RNase P protein component [Idiomarina loihiensis L2TR]
gi|67461324|sp|Q5QZK1|RNPA_IDILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56180749|gb|AAV83471.1| RNase P protein component [Idiomarina loihiensis L2TR]
Length = 125
Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 41 PRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
PR+G TV+KK+ AV+RNR++R+++E RL + D V+IAK+
Sbjct: 47 PRIGVTVSKKRAKRAVDRNRIKRQIRETFRLRQHKI--PAFDIVIIAKQ 93
>gi|255016878|ref|ZP_05289004.1| ribonuclease P [Listeria monocytogenes FSL F2-515]
Length = 88
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 11 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 66
>gi|78045102|ref|YP_358874.1| ribonuclease P protein component [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577257|sp|Q3AG60|RNPA_CARHZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77997217|gb|ABB16116.1| ribonuclease P protein component [Carboxydothermus
hydrogenoformans Z-2901]
Length = 116
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV-RLCAEGVLKHGHDYVL 84
+F + L N + LP G +V+KK G AV RNR+RRRLKEA+ RLC E + G+DYV+
Sbjct: 27 YFVVYYLKNEDEKKLPSFGISVSKKIGKAVVRNRLRRRLKEALKRLCFEFL--PGYDYVI 84
Query: 85 IAK 87
I +
Sbjct: 85 IPR 87
>gi|149175832|ref|ZP_01854450.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
gi|148845279|gb|EDL59624.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
Length = 134
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 38 NLLP--RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
N LP R+G +V+KK G A++R R +R L+EA RL L G D + I + D
Sbjct: 54 NELPCTRLGVSVSKKNGNAIQRARKKRLLREAFRLI-RSQLPAGLDLIAIPRAD 106
>gi|149919111|ref|ZP_01907595.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
gi|149820041|gb|EDM79462.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
Length = 195
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 35 NNSNLLP-RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++S+L P R G TVT+K G AV RNR++R ++E R L G D V +AK+ A
Sbjct: 66 DSSSLPPTRCGITVTRKVGNAVVRNRIKRLVREVFRQN-RTRLPPGLDIVWVAKQQAAEA 124
Query: 94 PFKELCNHF 102
F + F
Sbjct: 125 NFSAVQADF 133
>gi|167629169|ref|YP_001679668.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
gi|167591909|gb|ABZ83657.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
Length = 118
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLIAKRDALFIPFKELC 99
R GF+V+ K G A RNR++R L+E +C L+ G D +LIA+ IPF+++
Sbjct: 46 RFGFSVSSKVGKANVRNRVKRMLRE---ICRRHGLRADDGSDIILIARSKIKGIPFRQVE 102
Query: 100 NHFVERVRRNK 110
++ +R K
Sbjct: 103 QDVIKLFKRAK 113
>gi|257437738|ref|ZP_05613493.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
gi|257200045|gb|EEU98329.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
Length = 152
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P L VL RVG T TKK G AV+RNR RR +K A+ + + G+D V
Sbjct: 45 PALVLYVLKTRGKKT--RVGLTATKKIGHAVQRNRARRVMKAAIDEHLDQNI-GGYDLVF 101
Query: 85 IAK 87
+A+
Sbjct: 102 VAR 104
>gi|158520117|ref|YP_001527987.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
gi|226736860|sp|A8ZRZ3|RNPA_DESOH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158508943|gb|ABW65910.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
Length = 121
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G TV+KK G A RNR++R ++E RL + L + D +IAK+ A+ EL
Sbjct: 46 RLGITVSKKVGKAARRNRIKRHVREFFRLHRDN-LSNCWDINVIAKKKAVNASPAELERS 104
Query: 102 FVERVRRNKRSYYSGKN 118
E ++ R + S +
Sbjct: 105 LAELFHKSSREFPSDRQ 121
>gi|119503571|ref|ZP_01625654.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
gi|119460633|gb|EAW41725.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
Length = 123
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCA 72
A+ + +LR G +L + N S+ R+G + KK AV+RNR++R +E R +
Sbjct: 22 AVFETCDLRAGSKHALLLTIPNPSH--SRLGLIIAKKNVRLAVQRNRIKRVAREFFRSTS 79
Query: 73 EGVLKHGHDYVLIAKRD 89
LKH D VL+AKRD
Sbjct: 80 ---LKHPRDIVLLAKRD 93
>gi|21233658|ref|NP_639575.1| ribonuclease P [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770624|ref|YP_245386.1| ribonuclease P [Xanthomonas campestris pv. campestris str. 8004]
gi|188993862|ref|YP_001905872.1| ribonuclease P [Xanthomonas campestris pv. campestris str. B100]
gi|24638172|sp|Q8P337|RNPA_XANCP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|81303429|sp|Q4UNK7|RNPA_XANC8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890168|sp|B0RMM7|RNPA_XANCB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21115531|gb|AAM43457.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575956|gb|AAY51366.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. 8004]
gi|167735622|emb|CAP53840.1| ribonuclease P, protein component [Xanthomonas campestris pv.
campestris]
Length = 148
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 16 VRTRAQYTVVFDTARRTSDPLLSLHWRSGETP---PRLGMAVSRKVDTRAVGRNRIKRVL 72
Query: 65 KEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R L E G DYV++A+ A ++ + FV +RR
Sbjct: 73 RDAMRHLLPE---LAGGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|134301156|ref|YP_001114652.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
gi|172044354|sp|A4J9S4|RNPA_DESRM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134053856|gb|ABO51827.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
Length = 113
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
N L R GF+++KK G AV RNR+RR LKE R + D+V I ++ + F
Sbjct: 35 NKGLGRRFGFSISKKVGKAVCRNRLRRILKELCRFHLDR-FSDDCDFVFIVRQTSSDQDF 93
Query: 96 KELCNH 101
++ H
Sbjct: 94 HQMEKH 99
>gi|15616627|ref|NP_244933.1| ribonuclease P [Bacillus halodurans C-125]
gi|9789796|sp|Q9RCA4|RNPA_BACHD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|5672645|dbj|BAA82683.1| 56%-identity [Bacillus halodurans]
gi|10176690|dbj|BAB07784.1| ribonuclease P [Bacillus halodurans C-125]
Length = 119
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + VL + RVG +V+KK G AV RNR++R ++ + E + DYV+IA
Sbjct: 28 FVIYVLPKEGQDFF-RVGLSVSKKIGNAVTRNRVKRLIRTFFQE-HEQAISGERDYVIIA 85
Query: 87 KRDALFIPFKEL 98
++ A + ++++
Sbjct: 86 RKPAADMTYEQV 97
>gi|320109425|ref|YP_004185015.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
gi|319927946|gb|ADV85021.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
Length = 154
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
PRVG TV + G AV RNR++RRL+ AV+
Sbjct: 78 PRVGLTVGRVMGDAVTRNRIKRRLRSAVQ 106
>gi|221633071|ref|YP_002522296.1| ribonuclease P protein component [Thermomicrobium roseum DSM
5159]
gi|221157186|gb|ACM06313.1| ribonuclease P protein component [Thermomicrobium roseum DSM
5159]
Length = 129
Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
R GF + ++ G AV RN+++R L+EAVR L+ G+D V +A R AL P
Sbjct: 42 RYGFAIGRRVGKAVRRNKVKRWLREAVRRL-HPRLRQGYDIVFVA-RGALADP 92
>gi|290892035|ref|ZP_06555032.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
gi|290558629|gb|EFD92146.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
Length = 119
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 97
>gi|18311641|ref|NP_563575.1| ribonuclease P [Clostridium perfringens str. 13]
gi|110799284|ref|YP_697350.1| ribonuclease P [Clostridium perfringens ATCC 13124]
gi|110803108|ref|YP_699908.1| ribonuclease P [Clostridium perfringens SM101]
gi|168207738|ref|ZP_02633743.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|168211553|ref|ZP_02637178.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|168214847|ref|ZP_02640472.1| ribonuclease P protein component [Clostridium perfringens CPE
str. F4969]
gi|168218055|ref|ZP_02643680.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
gi|169343434|ref|ZP_02864434.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|182626427|ref|ZP_02954180.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|21263941|sp|Q8XH26|RNPA_CLOPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123049533|sp|Q0TLZ0|RNPA_CLOP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123341460|sp|Q0SPP9|RNPA_CLOPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|18146325|dbj|BAB82365.1| ribonuclease P protein component [Clostridium perfringens str.
13]
gi|110673931|gb|ABG82918.1| ribonuclease P protein component [Clostridium perfringens ATCC
13124]
gi|110683609|gb|ABG86979.1| ribonuclease P protein component [Clostridium perfringens SM101]
gi|169298386|gb|EDS80475.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|170660930|gb|EDT13613.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|170710468|gb|EDT22650.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|170713722|gb|EDT25904.1| ribonuclease P protein component [Clostridium perfringens CPE
str. F4969]
gi|177908301|gb|EDT70854.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|182379925|gb|EDT77404.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
Length = 125
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+VG +V+KK G +V R+R++R + E RL + LK G+D+V IA+
Sbjct: 46 KVGVSVSKKVGKSVVRSRVKRLILENYRLNSSE-LKEGYDFVFIAR 90
>gi|315453619|ref|YP_004073889.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
gi|315132671|emb|CBY83299.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
Length = 122
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVL--NNNNSNLL----PRVGFTVTKKQGCAVE 56
+ LK RQF+ V KKG + F L L N+ + + L +G +V+KK G AV+
Sbjct: 2 VVSLKTSRQFSYVYKKGVKKHHGLFMLYTLPLNSTHRHFLGIQESVLGLSVSKKVGNAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH-----FVERVRRNKR 111
RN ++RR++ + LK V +AK +P+ L +H F +R KR
Sbjct: 62 RNLIKRRVRAIFQHLP---LKTPQAIVFVAKAGLHQLPYITLQDHIRQCLFSRASQRTKR 118
Query: 112 SY 113
+
Sbjct: 119 HH 120
>gi|313765028|gb|EFS36392.1| ribonuclease P protein component [Propionibacterium acnes
HL013PA1]
Length = 141
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 55 PLVSTTT-SRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCR 98
>gi|254830710|ref|ZP_05235365.1| ribonuclease P [Listeria monocytogenes 10403S]
Length = 119
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 97
>gi|16802045|ref|NP_472313.1| ribonuclease P [Listeria innocua Clip11262]
gi|21263948|sp|Q926Q4|RNPA_LISIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16415527|emb|CAC98212.1| ribonuclease P protein component [Listeria innocua Clip11262]
gi|313621679|gb|EFR92462.1| ribonuclease P protein component [Listeria innocua FSL S4-378]
gi|313625810|gb|EFR95424.1| ribonuclease P protein component [Listeria innocua FSL J1-023]
Length = 119
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 97
>gi|291543428|emb|CBL16537.1| ribonuclease P protein component, eubacterial [Ruminococcus sp.
18P13]
Length = 114
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G T KK G AV RNR +R +++A R E +L G D V++A+ L I EL
Sbjct: 36 RLGVTAGKKLGNAVCRNRAKRLIRQAYRE-TEALLPCGVDLVIVARSSILQIKSPEL 91
>gi|315273160|ref|ZP_07869207.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
gi|313616211|gb|EFR89289.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
Length = 119
Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L SN R+G +V+KK G AV RNR++R ++++ E + ++Y++IA
Sbjct: 28 FVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-EHQINPENEYIIIA 85
Query: 87 KRDALFIPFKEL 98
++ A + F E+
Sbjct: 86 RKPAANMDFHEV 97
>gi|217965937|ref|YP_002351615.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|254808069|sp|B8DCV5|RNPA_LISMH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|217335207|gb|ACK41001.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|307572446|emb|CAR85625.1| ribonuclease P protein component [Listeria monocytogenes L99]
gi|313611879|gb|EFR86334.1| ribonuclease P protein component [Listeria monocytogenes FSL
F2-208]
Length = 119
Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 97
>gi|28896778|ref|NP_796383.1| ribonuclease P [Vibrio parahaemolyticus RIMD 2210633]
gi|153838497|ref|ZP_01991164.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|260876538|ref|ZP_05888893.1| ribonuclease P protein component [Vibrio parahaemolyticus
AN-5034]
gi|260897405|ref|ZP_05905901.1| ribonuclease P protein component [Vibrio parahaemolyticus
Peru-466]
gi|260901107|ref|ZP_05909502.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
gi|31340402|sp|Q87TR4|RNPA_VIBPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28804986|dbj|BAC58267.1| ribonuclease P protein component [Vibrio parahaemolyticus RIMD
2210633]
gi|149748120|gb|EDM58979.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|308087931|gb|EFO37626.1| ribonuclease P protein component [Vibrio parahaemolyticus
Peru-466]
gi|308090349|gb|EFO40044.1| ribonuclease P protein component [Vibrio parahaemolyticus
AN-5034]
gi|308108174|gb|EFO45714.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
Length = 118
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNKLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNSQHQLP--NKDF 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|315222385|ref|ZP_07864290.1| ribonuclease P protein component [Streptococcus anginosus F0211]
gi|315188546|gb|EFU22256.1| ribonuclease P protein component [Streptococcus anginosus F0211]
Length = 119
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG +V+KK G AV RN+++RR++ V + + L D+V+IA++ + ++EL
Sbjct: 41 RVGISVSKKLGNAVMRNKIKRRIRH-VLIVHQAELA-TLDFVVIARKGVEILTYQEL 95
>gi|253581089|ref|ZP_04858349.1| ribonuclease P [Ruminococcus sp. 5_1_39B_FAA]
gi|251847625|gb|EES75595.1| ribonuclease P [Ruminococcus sp. 5_1_39BFAA]
Length = 123
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 7 LKKRRQFALVKKGELRKGP-FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V + KG + + VL N + R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNQDFQKVYRNGTSKGNRYLVMYVLKN--QYMKNRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
E+ RL E ++ D V++A+ A ++E+
Sbjct: 65 ESYRL-NEAEFENSLDIVVVARPQAKDRTYQEI 96
>gi|50843792|ref|YP_057019.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|50841394|gb|AAT84061.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|313806854|gb|EFS45352.1| putative ribonuclease P protein component [Propionibacterium
acnes HL087PA2]
gi|313817641|gb|EFS55355.1| putative ribonuclease P protein component [Propionibacterium
acnes HL046PA2]
gi|313821534|gb|EFS59248.1| putative ribonuclease P protein component [Propionibacterium
acnes HL036PA1]
gi|313826191|gb|EFS63905.1| putative ribonuclease P protein component [Propionibacterium
acnes HL063PA1]
gi|314926335|gb|EFS90166.1| putative ribonuclease P protein component [Propionibacterium
acnes HL036PA3]
gi|314980259|gb|EFT24353.1| putative ribonuclease P protein component [Propionibacterium
acnes HL072PA2]
gi|314987114|gb|EFT31206.1| putative ribonuclease P protein component [Propionibacterium
acnes HL005PA2]
gi|314990684|gb|EFT34775.1| putative ribonuclease P protein component [Propionibacterium
acnes HL005PA3]
gi|315088013|gb|EFT59989.1| putative ribonuclease P protein component [Propionibacterium
acnes HL072PA1]
gi|315107500|gb|EFT79476.1| putative ribonuclease P protein component [Propionibacterium
acnes HL030PA1]
gi|327334555|gb|EGE76266.1| ribonuclease P protein component [Propionibacterium acnes
HL097PA1]
gi|327444471|gb|EGE91125.1| putative ribonuclease P protein component [Propionibacterium
acnes HL013PA2]
gi|328757978|gb|EGF71594.1| putative ribonuclease P protein component [Propionibacterium
acnes HL020PA1]
gi|332676745|gb|AEE73561.1| ribonuclease P protein component [Propionibacterium acnes 266]
Length = 85
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ ++ PRVGF V+K G AV RNR++RRL+
Sbjct: 8 SDLDVTPRVGFVVSKAVGNAVTRNRVKRRLR 38
>gi|289424482|ref|ZP_06426265.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|295131880|ref|YP_003582543.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|289155179|gb|EFD03861.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|291375994|gb|ADD99848.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|327446725|gb|EGE93379.1| ribonuclease P protein component [Propionibacterium acnes HL043PA2]
Length = 148
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
P S + ++ ++ PRVGF V+K G AV RNR++RRL+
Sbjct: 62 PLVSTTT-SRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLR 101
>gi|313771068|gb|EFS37034.1| putative ribonuclease P protein component [Propionibacterium
acnes HL074PA1]
gi|313792570|gb|EFS40656.1| putative ribonuclease P protein component [Propionibacterium
acnes HL110PA1]
gi|313803571|gb|EFS44753.1| putative ribonuclease P protein component [Propionibacterium
acnes HL110PA2]
gi|313811767|gb|EFS49481.1| putative ribonuclease P protein component [Propionibacterium
acnes HL083PA1]
gi|313814223|gb|EFS51937.1| putative ribonuclease P protein component [Propionibacterium
acnes HL025PA1]
gi|313815415|gb|EFS53129.1| putative ribonuclease P protein component [Propionibacterium
acnes HL059PA1]
gi|313829187|gb|EFS66901.1| putative ribonuclease P protein component [Propionibacterium
acnes HL063PA2]
gi|313832761|gb|EFS70475.1| putative ribonuclease P protein component [Propionibacterium
acnes HL056PA1]
gi|313839620|gb|EFS77334.1| putative ribonuclease P protein component [Propionibacterium
acnes HL086PA1]
gi|314916211|gb|EFS80042.1| putative ribonuclease P protein component [Propionibacterium
acnes HL005PA4]
gi|314921814|gb|EFS85645.1| putative ribonuclease P protein component [Propionibacterium
acnes HL050PA3]
gi|314930921|gb|EFS94752.1| putative ribonuclease P protein component [Propionibacterium
acnes HL067PA1]
gi|314955283|gb|EFS99688.1| putative ribonuclease P protein component [Propionibacterium
acnes HL027PA1]
gi|314959156|gb|EFT03258.1| putative ribonuclease P protein component [Propionibacterium
acnes HL002PA1]
gi|314975196|gb|EFT19291.1| putative ribonuclease P protein component [Propionibacterium
acnes HL053PA1]
gi|314985205|gb|EFT29297.1| putative ribonuclease P protein component [Propionibacterium
acnes HL005PA1]
gi|315078991|gb|EFT51003.1| putative ribonuclease P protein component [Propionibacterium
acnes HL053PA2]
gi|315081499|gb|EFT53475.1| putative ribonuclease P protein component [Propionibacterium
acnes HL078PA1]
gi|315097164|gb|EFT69140.1| putative ribonuclease P protein component [Propionibacterium
acnes HL038PA1]
gi|315099344|gb|EFT71320.1| putative ribonuclease P protein component [Propionibacterium
acnes HL059PA2]
gi|315102315|gb|EFT74291.1| putative ribonuclease P protein component [Propionibacterium
acnes HL046PA1]
gi|315109868|gb|EFT81844.1| putative ribonuclease P protein component [Propionibacterium
acnes HL030PA2]
gi|327332498|gb|EGE74233.1| ribonuclease P protein component [Propionibacterium acnes
HL096PA2]
gi|327448833|gb|EGE95487.1| putative ribonuclease P protein component [Propionibacterium
acnes HL043PA1]
gi|327454250|gb|EGF00905.1| putative ribonuclease P protein component [Propionibacterium
acnes HL087PA3]
gi|327457416|gb|EGF04071.1| putative ribonuclease P protein component [Propionibacterium
acnes HL092PA1]
gi|328756008|gb|EGF69624.1| putative ribonuclease P protein component [Propionibacterium
acnes HL087PA1]
gi|328758851|gb|EGF72467.1| putative ribonuclease P protein component [Propionibacterium
acnes HL025PA2]
gi|328759809|gb|EGF73400.1| ribonuclease P protein component [Propionibacterium acnes
HL099PA1]
Length = 85
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ ++ PRVGF V+K G AV RNR++RRL+
Sbjct: 8 SDLDVTPRVGFVVSKTVGNAVTRNRVKRRLR 38
>gi|15834787|ref|NP_296546.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270284954|ref|ZP_06194348.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270288980|ref|ZP_06195282.1| ribonuclease P [Chlamydia muridarum Weiss]
gi|301336352|ref|ZP_07224554.1| ribonuclease P [Chlamydia muridarum MopnTet14]
gi|9789792|sp|Q9PLD7|RNPA_CHLMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|8163152|gb|AAF73535.1| ribonuclease P protein component [Chlamydia muridarum Nigg]
Length = 119
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G+ + +L ++ + +SN+ +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRCGQYCRTDQATLRIVPSRHSNIR-KVGVTVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|315086611|gb|EFT58587.1| ribonuclease P protein component [Propionibacterium acnes
HL002PA3]
Length = 141
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 55 PLVSTTT-SRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR 98
>gi|314961661|gb|EFT05762.1| ribonuclease P [Propionibacterium acnes HL002PA2]
gi|327333671|gb|EGE75388.1| ribonuclease P protein component [Propionibacterium acnes
HL096PA3]
Length = 95
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 9 PLVSTTT-SRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR 52
>gi|282853037|ref|ZP_06262374.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
gi|282582490|gb|EFB87870.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
Length = 148
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 62 PLVSTTT-SRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR 105
>gi|315105161|gb|EFT77137.1| ribonuclease P protein component [Propionibacterium acnes
HL050PA2]
Length = 140
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 55 PLVSTTT-SRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR 98
>gi|289662286|ref|ZP_06483867.1| ribonuclease P [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 145
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 16 VRTRAQYTVVFDNARRTSDPLLSLHWRIGDTP---PRLGMAVSRKVDTRAVGRNRIKRVL 72
Query: 65 KEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R L E G DYV++A+ A ++ + FV +RR
Sbjct: 73 RDAMRHLLPE---LAGGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|255024428|ref|ZP_05296414.1| ribonuclease P [Listeria monocytogenes FSL J1-208]
Length = 121
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R ++++ E + ++Y++IA++ A + F E+
Sbjct: 44 RIGLSVSKKIGNAVCRNRIKRYIRQSFHEL-ESQINPENEYIIIARKPAANMDFHEV 99
>gi|218885992|ref|YP_002435313.1| ribonuclease P [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756946|gb|ACL07845.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 180
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
F L L+ S R+G VT+K G AV+RNR++R L+E RL ++ D +++
Sbjct: 35 LFVLFDLDRTASPEGWRLGLAVTRKTGSAVQRNRVKRVLREFFRLH-RALMPGDVDVIVV 93
Query: 86 AKR 88
KR
Sbjct: 94 PKR 96
>gi|254456017|ref|ZP_05069446.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083019|gb|EDZ60445.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
Length = 113
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKEL 98
+ F KK G AV+RN+++RRL+ + + + +K + Y++IAK L +K +
Sbjct: 45 ISFVTKKKIGNAVKRNKIKRRLRNIINDAVKKISIKFNYSYLVIAKSTMLNSDYKNI 101
>gi|218781969|ref|YP_002433287.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
gi|226736859|sp|B8FMU9|RNPA_DESAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218763353|gb|ACL05819.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
Length = 118
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+KR QF AL ++G+ + +F + V + R+G TVTKK G AV RNR++R ++
Sbjct: 12 LRKRPQFLALGERGKRVQNAYF-IAVFAPAQGKV-SRLGVTVTKKVGDAVTRNRIKRCVR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR 88
E RL + LK D +IAK+
Sbjct: 70 EYFRL-NQHRLKAPVDINVIAKK 91
>gi|314965759|gb|EFT09858.1| putative ribonuclease P protein component [Propionibacterium
acnes HL082PA2]
gi|314982901|gb|EFT26993.1| putative ribonuclease P protein component [Propionibacterium
acnes HL110PA3]
gi|315091207|gb|EFT63183.1| putative ribonuclease P protein component [Propionibacterium
acnes HL110PA4]
gi|315094441|gb|EFT66417.1| putative ribonuclease P protein component [Propionibacterium
acnes HL060PA1]
gi|327328936|gb|EGE70696.1| ribonuclease P protein component [Propionibacterium acnes
HL103PA1]
Length = 85
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ ++ PRVGF V+K G AV RNR++RRL+
Sbjct: 8 SDLDVAPRVGFVVSKAVGNAVTRNRVKRRLR 38
>gi|160882063|ref|YP_001561031.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
gi|189043733|sp|A9KLY3|RNPA_CLOPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160430729|gb|ABX44292.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
Length = 116
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK +QF V K G+ + + V N S + R+G +V+KK G +V R+R+ R ++
Sbjct: 5 LKNSQQFGNVYKNGKSFANKYLVMYVCKNELS--INRLGISVSKKVGNSVVRHRISRLIR 62
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E+ RL + + G D V++A+ + + E+ + + + +K
Sbjct: 63 ESYRL-NDSISNSGLDIVIVARAGSKGKNYSEISSALMHLAKLHK 106
>gi|108563799|ref|YP_628115.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
gi|123073716|sp|Q1CRI1|RNPA_HELPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|107837572|gb|ABF85441.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
Length = 166
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+G +V+KK G AV+RN ++RRL+ L G V + + D + F L HF
Sbjct: 75 LGLSVSKKVGNAVKRNLIKRRLRSLT--LKHAALCQGLALVFVPRSDCYHLDFWALEKHF 132
Query: 103 VERV 106
+E +
Sbjct: 133 LEML 136
>gi|289667651|ref|ZP_06488726.1| ribonuclease P [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 145
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
++ R Q+ +V R P SL + PR+G V++K AV RNR++R L
Sbjct: 16 VRTRAQYTVVFDNARRTSDPLLSLHWRIGDTP---PRLGMAVSRKVDTRAVGRNRIKRVL 72
Query: 65 KEAVR-LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++A+R L E G DYV++A+ A ++ + FV +RR
Sbjct: 73 RDAMRHLLPE---LAGGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|315286679|ref|ZP_07872172.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
gi|313630900|gb|EFR98591.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
Length = 119
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RNR++R +++ E + ++Y++IA++ A + F E+
Sbjct: 42 RIGLSVSKKIGNAVCRNRIKRYIRQTFHELEEQI-NPENEYIIIARKPAANMDFHEV 97
>gi|289427475|ref|ZP_06429188.1| ribonuclease P protein component [Propionibacterium acnes J165]
gi|289159405|gb|EFD07596.1| ribonuclease P protein component [Propionibacterium acnes J165]
Length = 148
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
P S + ++ ++ PRVGF V+K G AV RNR++RRL+
Sbjct: 62 PLVSTTT-SRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLR 101
>gi|146284524|ref|YP_001174677.1| ribonuclease P [Pseudomonas stutzeri A1501]
gi|166226733|sp|A4VS84|RNPA_PSEU5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145572729|gb|ABP81835.1| ribonuclease P protein component [Pseudomonas stutzeri A1501]
Length = 131
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF V K P ++ +L N PR+G + KK +VERNR++R+++E R
Sbjct: 15 RQFKAVFDSPSGKVPGRNVLLLARENDLQHPRLGLVIGKKSVKLSVERNRIKRQIRETFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ G D V+IA++ + EL F + +R R+
Sbjct: 75 --HHQLELAGWDIVIIARKGLADLDNPELAKQFAKLWKRLSRN 115
>gi|92119161|ref|YP_578890.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
gi|91802055|gb|ABE64430.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
Length = 111
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F G P F ++ N+ + R+GFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRAAFLAAANGLRVNAPAFVVQNRRRNDDGPI-RIGFTVTKKNGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
V+ ++ DYV+I +R AL F + +
Sbjct: 63 LVKRVDAVSMRPHSDYVVIGRRAALDRGFAVMLDDL 98
>gi|314922675|gb|EFS86506.1| ribonuclease P [Propionibacterium acnes HL001PA1]
Length = 95
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
P S + ++ ++ PRVGF V+K G AV RNR++RRL+ R
Sbjct: 9 PLVSTTT-SRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR 52
>gi|75677254|ref|YP_319675.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
gi|74422124|gb|ABA06323.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
Length = 111
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F G P F ++ ++ + R+GFTVTKK G A ERNR+RRRL+E
Sbjct: 4 LRQRADFLAAAHGPRVSTPAFVVQNRRRSDDGAI-RIGFTVTKKNGTATERNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDAL 91
V+ ++ DYV+I +R AL
Sbjct: 63 LVKRVDAVSMRPHSDYVIIGRRAAL 87
>gi|15600762|ref|NP_254256.1| ribonuclease P [Pseudomonas aeruginosa PAO1]
gi|107104670|ref|ZP_01368588.1| hypothetical protein PaerPA_01005749 [Pseudomonas aeruginosa PACS2]
gi|116053720|ref|YP_794047.1| ribonuclease P [Pseudomonas aeruginosa UCBPP-PA14]
gi|254243113|ref|ZP_04936435.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
gi|13878724|sp|Q9HT05|RNPA_PSEAE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122256260|sp|Q02DD9|RNPA_PSEAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9951910|gb|AAG08954.1|AE004968_8 ribonuclease P protein component [Pseudomonas aeruginosa PAO1]
gi|115588941|gb|ABJ14956.1| ribonuclease P protein component [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126196491|gb|EAZ60554.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
Length = 135
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E + G D V+IA++ + EL F
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQF 106
>gi|224367784|ref|YP_002601947.1| RnpA [Desulfobacterium autotrophicum HRM2]
gi|259494104|sp|C0QIZ3|RNPA_DESAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|223690500|gb|ACN13783.1| RnpA [Desulfobacterium autotrophicum HRM2]
Length = 117
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+LK+ L + G ++ +F +L + R+G TV+K+ G AVERNR++R ++
Sbjct: 12 LLKRADFLKLSRSGRTKQTRYFIAAMLGSETDT--TRLGITVSKRVGNAVERNRIKRIVR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR 88
+ RL + + D +IA++
Sbjct: 70 DYYRLNRD-TISGNRDINIIARK 91
>gi|225571948|ref|ZP_03780818.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
gi|225159396|gb|EEG72015.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNKDFQTVYNKGISCANKYLVMYVMENHTER--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
E+ RL E + G D ++IA+ A +KE+ +
Sbjct: 65 ESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVS 98
>gi|49077256|gb|AAT49655.1| PA5569 [synthetic construct]
Length = 136
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E + G D V+IA++ + EL F
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQF 106
>gi|313111479|ref|ZP_07797280.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
gi|310883782|gb|EFQ42376.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
Length = 134
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 15 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E + G D V+IA++ + EL F
Sbjct: 75 HNQETLA--GWDIVVIARKGLGELENPELHQQF 105
>gi|156972772|ref|YP_001443679.1| ribonuclease P [Vibrio harveyi ATCC BAA-1116]
gi|163803613|ref|ZP_02197479.1| ribonuclease P [Vibrio sp. AND4]
gi|269962687|ref|ZP_06177032.1| ribonuclease P [Vibrio harveyi 1DA3]
gi|166228259|sp|A7N1E4|RNPA_VIBHB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156524366|gb|ABU69452.1| hypothetical protein VIBHAR_00437 [Vibrio harveyi ATCC BAA-1116]
gi|159172607|gb|EDP57465.1| ribonuclease P [Vibrio sp. AND4]
gi|269832610|gb|EEZ86724.1| ribonuclease P [Vibrio harveyi 1DA3]
Length = 118
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNKLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQLP--NKDF 85
Query: 83 VLIAKRDALFIPFKEL 98
V+IAK+ A + +EL
Sbjct: 86 VVIAKKSAQDLSNEEL 101
>gi|239906117|ref|YP_002952856.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
gi|239795981|dbj|BAH74970.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
Length = 85
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
++KK G AV RNR++R ++E RLCA + G D V++AK+
Sbjct: 1 MAISKKVGNAVARNRVKRVVRECFRLCAPQAVA-GLDVVVVAKK 43
>gi|226229340|ref|YP_002763446.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
gi|226092531|dbj|BAH40976.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
Length = 106
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
S+E + RVGF V + + AV RNR++RRL+E VRL
Sbjct: 5 SMEARTTASLLAFARVGFVVPRYKHSAVARNRLKRRLRELVRL 47
>gi|255349182|ref|ZP_05381189.1| ribonuclease P [Chlamydia trachomatis 70]
gi|255503719|ref|ZP_05382109.1| ribonuclease P [Chlamydia trachomatis 70s]
Length = 120
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRNGRCYRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|108802371|ref|YP_642568.1| ribonuclease P [Mycobacterium sp. MCS]
gi|119866064|ref|YP_936016.1| ribonuclease P [Mycobacterium sp. KMS]
gi|126438351|ref|YP_001074042.1| ribonuclease P [Mycobacterium sp. JLS]
gi|123177783|sp|Q1B0S2|RNPA_MYCSS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226724|sp|A3Q8S4|RNPA_MYCSJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226725|sp|A1U8R8|RNPA_MYCSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|108772790|gb|ABG11512.1| ribonuclease P protein component [Mycobacterium sp. MCS]
gi|119692153|gb|ABL89226.1| ribonuclease P protein component [Mycobacterium sp. KMS]
gi|126238151|gb|ABO01552.1| ribonuclease P protein component [Mycobacterium sp. JLS]
Length = 118
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 16 VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
V KG P L + N + PRVG V K G AV R+R+ RRL+ +V +
Sbjct: 18 VSKGVRSAQPDLVLHMANVLDDPSGPRVGLVVAKSVGNAVVRHRVSRRLRHSVHPMLDE- 76
Query: 76 LKHGHDYVL 84
L+ GH V+
Sbjct: 77 LQPGHRLVI 85
>gi|120407006|ref|YP_956835.1| ribonuclease P [Mycobacterium vanbaalenii PYR-1]
gi|166226727|sp|A1TI29|RNPA_MYCVP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119959824|gb|ABM16829.1| ribonuclease P protein component [Mycobacterium vanbaalenii PYR-1]
Length = 119
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 14 ALVKKGELRKGPFFSLEVL-NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
A V KG P + L ++ ++ PRVG V+K G AV+R+R+ RRL+ A
Sbjct: 16 ATVSKGTRAAQPDVVVYRLRSDQTADPGPRVGLIVSKAVGNAVQRHRVSRRLRHAALAVL 75
Query: 73 EGVLKHGHDYVLI----AKRDALFIPFKELCNHFVERVRR 108
E + D V+I RDA+ ++ +ER+R+
Sbjct: 76 EDL--DPSDRVVIRALPRSRDAVTPRLEQELRTALERIRQ 113
>gi|148270461|ref|YP_001244921.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
gi|166228258|sp|A5IMC2|RNPA_THEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147736005|gb|ABQ47345.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
Length = 117
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
+ K+GE + +F VL N R+G V +K G A RN+++R ++E R ++
Sbjct: 19 TIFKEGESLQNEYFV--VLFKKNGLDYSRLGIVVKRKFGKATRRNKLKRWVREIFR-KSK 75
Query: 74 GVLKHGHDYVLIAKR 88
GV+ G D V+I ++
Sbjct: 76 GVIPKGFDIVVIPRK 90
>gi|254797189|ref|YP_003082029.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
gi|254590427|gb|ACT69789.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
Length = 72
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VGF VTKK G AV+RN++RR+L+ + Y+ I ++F F +
Sbjct: 2 VGFIVTKKVGSAVKRNKVRRKLRALLPFLISMKKLLNRAYIFIPSPASVFSDFSAIREDV 61
Query: 103 VERVRRNKRSY 113
+ + R RS+
Sbjct: 62 LSCLERAGRSH 72
>gi|138897070|ref|YP_001127523.1| ribonuclease P [Geobacillus thermodenitrificans NG80-2]
gi|166226719|sp|A4ITX4|RNPA_GEOTN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134268583|gb|ABO68778.1| Ribonuclease P protein component [Geobacillus thermodenitrificans
NG80-2]
Length = 121
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G +V+KK G AV RN+++R +++ E V+ G DYV+IA++ + + E+
Sbjct: 42 RIGLSVSKKLGKAVVRNQIKRYVRQCFLELKEEVV-PGKDYVIIARQPVAEMGYAEVKKS 100
Query: 102 FVERVRR 108
+ +R+
Sbjct: 101 LLHVLRK 107
>gi|295101865|emb|CBK99410.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii L2-6]
Length = 131
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
RVG T TKK G AV+RNR RR +K A+ + + G+D V +A+
Sbjct: 40 RVGLTATKKIGHAVQRNRARRVMKAAIDEHLDYNI-GGYDLVFVAR 84
>gi|317011579|gb|ADU85326.1| ribonuclease P protein component [Helicobacter pylori SouthAfrica7]
Length = 161
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNN-------------------NNSNLLPRVGFT 46
LK + +F V +KG + PFFSL VL+ + L +G +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLPKEPPKEKESLKDPLSYRLKDKETLFLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G A +RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAAKRNLIKRRLRSLA--SRHAALCQGLALVFVPRSDCYHLDFWALEKHFLETL 136
>gi|315446825|ref|YP_004079704.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
gi|315265128|gb|ADU01870.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
Length = 124
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
A V +G P L L ++ + PRVG V+K G AV R+R+ RRL+ A R
Sbjct: 16 ATVSRGTRAAQPDLVLYTLRSDETGAPGPRVGLIVSKAVGNAVVRHRVSRRLRHAAR--- 72
Query: 73 EGVLK--HGHDYVLI----AKRDALFIPFKELCNHFVERV 106
G+L+ D V+I RDA F++ + ++R+
Sbjct: 73 -GILERLDSRDRVVIRALPRSRDAGTQRFEQELHTALDRI 111
>gi|118472073|ref|YP_891137.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
gi|118173360|gb|ABK74256.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
Length = 123
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI----AKRDALFIPFK 96
PR+G V+K G AVER+R+ RRL+ + G+ D ++I + RDA +
Sbjct: 48 PRIGLIVSKAVGNAVERHRVSRRLRHVAKTFVSGL--DPADLIVIRARPSSRDATSSRLE 105
Query: 97 ELCNHFVERVRRNKRS 112
+ERV +R+
Sbjct: 106 RQLGQALERVSSKRRA 121
>gi|27469336|ref|NP_765973.1| ribonuclease P [Staphylococcus epidermidis ATCC 12228]
gi|57865941|ref|YP_187602.1| ribonuclease P [Staphylococcus epidermidis RP62A]
gi|242243257|ref|ZP_04797702.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251811362|ref|ZP_04825835.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|282874719|ref|ZP_06283598.1| ribonuclease P protein component [Staphylococcus epidermidis
SK135]
gi|293367583|ref|ZP_06614236.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|29427693|sp|Q8CMN4|RNPA_STAES RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461260|sp|Q5HS37|RNPA_STAEQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27316886|gb|AAO06061.1|AE016752_94 ribonuclease P protein component [Staphylococcus epidermidis ATCC
12228]
gi|57636599|gb|AAW53387.1| ribonuclease P protein component [Staphylococcus epidermidis
RP62A]
gi|242233206|gb|EES35518.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251805111|gb|EES57768.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|281296435|gb|EFA88950.1| ribonuclease P protein component [Staphylococcus epidermidis
SK135]
gi|291318296|gb|EFE58689.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399916|gb|EFV88162.1| ribonuclease P protein component [Staphylococcus epidermidis
FRI909]
gi|329724155|gb|EGG60673.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU144]
gi|329736062|gb|EGG72335.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU045]
Length = 115
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R+G +V+KK G AV RNR++R ++E ++ + ++ D ++IA++ A
Sbjct: 42 RLGISVSKKLGNAVTRNRIKRAIRENFKVHKQNII--AKDIIVIARQPA 88
>gi|89092262|ref|ZP_01165216.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
gi|89083350|gb|EAR62568.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
Length = 123
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVR 69
R F V K P L +L N+ PR+GF ++KK AV+RNR+RR ++E+ R
Sbjct: 16 RDFQFVFDDAQLKVPDQPLLILARPNNLGQPRLGFVISKKNVRQAVKRNRVRRIIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
L + D +++A++ E+ N + ++ K+S+ KN S+K
Sbjct: 76 LNQHSL--PSVDIIILARKG-----IGEMENEAIHKLM--KKSWSRLKNKSKK 119
>gi|297621042|ref|YP_003709179.1| Ribonuclease P protein component [Waddlia chondrophila WSU
86-1044]
gi|297376343|gb|ADI38173.1| Ribonuclease P protein component [Waddlia chondrophila WSU
86-1044]
Length = 115
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+LKK + +V+ G+ G F +E + N + R+G TV++K G AV+RNR +R ++
Sbjct: 11 LLKKYQFLRVVRYGKRHAGNFLVVESVKNRLNR--SRLGITVSRKFGKAVQRNRFKRLIR 68
Query: 66 EAVR 69
E R
Sbjct: 69 EGFR 72
>gi|296392436|ref|ZP_06881911.1| ribonuclease P [Pseudomonas aeruginosa PAb1]
Length = 135
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E VL G D V+IA++ + EL F
Sbjct: 76 HNQE-VLA-GWDIVVIARKGLGELENPELHQQF 106
>gi|312200979|ref|YP_004021040.1| ribonuclease P protein component [Frankia sp. EuI1c]
gi|311232315|gb|ADP85170.1| ribonuclease P protein component [Frankia sp. EuI1c]
Length = 131
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ L ++S R GF V++K G AV RN++RRRL+E R
Sbjct: 31 VHALRTDDSGPA-RAGFVVSRKVGAAVTRNQVRRRLREQTR 70
>gi|260890878|ref|ZP_05902141.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
gi|260859431|gb|EEX73931.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
Length = 81
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
N N R GF +KK G AV+RNR++R KE V++
Sbjct: 34 NVNNEQRFGFVASKKTGNAVQRNRIKRIFKEFVKI 68
>gi|196249891|ref|ZP_03148587.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
gi|196210767|gb|EDY05530.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
Length = 167
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RN+++R +++ E V+ G DYV+IA++ + + E+
Sbjct: 88 RIGLSVSKKLGKAVVRNQIKRYVRQCFLELKEEVVP-GKDYVIIARQPVAEMGYAEV 143
>gi|260595829|ref|YP_003208400.1| ribonuclease P [Cronobacter turicensis z3032]
gi|260215006|emb|CBA26667.1| Ribonuclease P protein component [Cronobacter turicensis z3032]
Length = 119
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ D+V++AKR + +EL + RR+
Sbjct: 76 RQHEL--PSMDFVVVAKRGIADLDNRELSEALEKLWRRH 112
>gi|88813022|ref|ZP_01128264.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
gi|88789655|gb|EAR20780.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
Length = 81
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVL 76
+F++ V+ N++ R+G TV+KK AV RNR++RR++EA RL G
Sbjct: 32 YFTVLVIRNDHDR--ARLGVTVSKKTAPLAVVRNRIKRRIREAFRLHQVGAW 81
>gi|166154126|ref|YP_001654244.1| ribonuclease P [Chlamydia trachomatis 434/Bu]
gi|166155001|ref|YP_001653256.1| ribonuclease P [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335365|ref|ZP_07223609.1| ribonuclease P [Chlamydia trachomatis L2tet1]
gi|226741386|sp|B0BAN9|RNPA_CHLTB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687428|sp|B0B910|RNPA_CHLT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|165930114|emb|CAP03597.1| ribonuclease P protein component [Chlamydia trachomatis 434/Bu]
gi|165930989|emb|CAP06551.1| ribonuclease P protein component [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 120
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNT-SKVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|188587645|ref|YP_001922720.1| ribonuclease P [Clostridium botulinum E3 str. Alaska E43]
gi|251781116|ref|ZP_04824036.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|238689656|sp|B2V1V3|RNPA_CLOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188497926|gb|ACD51062.1| ribonuclease P protein component [Clostridium botulinum E3 str.
Alaska E43]
gi|243085431|gb|EES51321.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 125
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVERNRM 60
LKK +F +V ++G+ L VL N + +VG +V+KK G +V R++
Sbjct: 5 LKKNIEFIIVYRRGKSFANKTLVLYVLKNKRNKDKDGIAYSKVGISVSKKVGNSVVRSKC 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKELCNHFVER 105
+R L E+ RL +LK G+D V +A+ RD+ + ++ + +++
Sbjct: 65 KRLLSESFRLNYNNILK-GYDCVFVARNPMRDSDYFETEKAMKNLIKK 111
>gi|197333937|ref|YP_002154776.1| ribonuclease P protein component [Vibrio fischeri MJ11]
gi|197315427|gb|ACH64874.1| ribonuclease P protein component [Vibrio fischeri MJ11]
Length = 107
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F+ +L NS PR+G V KKQ AV RN+ +R ++E+ R + D+
Sbjct: 19 SPHFT--ILARENSLSHPRLGLAVPKKQIKTAVGRNKFKRIVRESFRNKQHSLP--AKDF 74
Query: 83 VLIAKRDALFIP---FKELCNHFVERVRRNKR 111
V+IAK+ A + F +L + R+ R R
Sbjct: 75 VVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 106
>gi|218134373|ref|ZP_03463177.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
gi|217989758|gb|EEC55769.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
Length = 114
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+G +V+KK G ++ R+R+ R ++E+ RL A+ V+ G D +++A+
Sbjct: 43 RLGVSVSKKVGNSIVRHRLARLIRESYRLHADEVMT-GFDIIVVAR 87
>gi|317061938|ref|ZP_07926423.1| ribonuclease P protein component [Fusobacterium sp. D12]
gi|313687614|gb|EFS24449.1| ribonuclease P protein component [Fusobacterium sp. D12]
Length = 77
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
N+N + GF +KK G AV RNR++R +E V E VL ++ +AK+ +
Sbjct: 7 NNNFYNKYGFVASKKIGNAVCRNRIKRLFREFVNK-NETVLPKSTTFIFVAKKKS 60
>gi|260424966|ref|ZP_05779067.1| ribonuclease P protein component [Dialister invisus DSM 15470]
gi|260403761|gb|EEW97308.1| ribonuclease P protein component [Dialister invisus DSM 15470]
Length = 84
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
R+GF TK+ G AV RNR RR +KE RL + H ++ +L+A
Sbjct: 12 RIGFVTTKRIGNAVARNRARRLMKEVYRLHRHELSSH-YEAILLA 55
>gi|53802854|ref|YP_115422.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
gi|67461353|sp|Q602M8|RNPA_METCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53756615|gb|AAU90906.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
Length = 128
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL--CAEGVLKHGHDYVLI 85
L VL NS PR+G +++KQ AV+RNR++R ++E+ RL G + DYV++
Sbjct: 39 LTVLARPNSLAHPRLGLALSRKQIRKAVDRNRIKRLVRESFRLRQAQLGTI----DYVVM 94
Query: 86 AKRDALFI 93
A+ A +
Sbjct: 95 ARTPATSV 102
>gi|320531081|ref|ZP_08032110.1| ribonuclease P protein component [Selenomonas artemidis F0399]
gi|320136663|gb|EFW28616.1| ribonuclease P protein component [Selenomonas artemidis F0399]
Length = 130
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S I+K+R F V KG G + L +L + + + +VGF KK G A R+R
Sbjct: 8 LSRAQIIKRRSDFQNVYHKGTAFPGRYMILYILRD--ARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLC 71
++R ++EA RL
Sbjct: 66 IKRLMREAYRLM 77
>gi|309390349|gb|ADO78229.1| ribonuclease P protein component [Halanaerobium praevalens DSM
2228]
Length = 109
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R G +V+K+ G AV RN+++RRL+E +R + G++ + IA+ + + + L
Sbjct: 39 RYGLSVSKRVGNAVVRNKLKRRLREIIREFEKNEDFKGYEIIFIARNPVVQLNYHRL 95
>gi|91228354|ref|ZP_01262282.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269965282|ref|ZP_06179403.1| ribonuclease P [Vibrio alginolyticus 40B]
gi|91188114|gb|EAS74418.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269830083|gb|EEZ84311.1| ribonuclease P [Vibrio alginolyticus 40B]
Length = 118
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ NN S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARNNKLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQLP--NKDF 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|239828711|ref|YP_002951335.1| ribonuclease P [Geobacillus sp. WCH70]
gi|259494109|sp|C5D9Z1|RNPA_GEOSW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|239809004|gb|ACS26069.1| ribonuclease P protein component [Geobacillus sp. WCH70]
Length = 116
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
R+G +V+KK G AV RNR++R +++ + ++ DYV+IA+ +P E+
Sbjct: 42 RIGLSVSKKLGKAVVRNRIKRYIRQVFLEMKDDIMPQ-KDYVIIAR-----LPVAEMT 93
>gi|90962706|ref|YP_536622.1| ribonuclease P [Lactobacillus salivarius UCC118]
gi|227891667|ref|ZP_04009472.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|301300477|ref|ZP_07206676.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122448382|sp|Q1WRF9|RNPA_LACS1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|90821900|gb|ABE00539.1| Ribonuclease P protein component [Lactobacillus salivarius UCC118]
gi|227866470|gb|EEJ73891.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|300851924|gb|EFK79609.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 113
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++++ LK D+++IA+ ++ E+ H
Sbjct: 42 RVGISVGKKIGNAVARNWVKRRIRQSLTELKPQ-LKQDCDFLVIARPTVAYMSMAEVKEH 100
Query: 102 F 102
Sbjct: 101 L 101
>gi|59710611|ref|YP_203387.1| ribonuclease P [Vibrio fischeri ES114]
gi|67461223|sp|Q5E8Z7|RNPA_VIBF1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59478712|gb|AAW84499.1| ribonuclease P protein component [Vibrio fischeri ES114]
Length = 117
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F+ +L NS PR+G V KKQ AV RN+ +R ++E+ R + D+
Sbjct: 29 SPHFT--ILARENSLSHPRLGLAVPKKQIKTAVGRNKFKRIVRESFRNKQHSLP--AKDF 84
Query: 83 VLIAKRDALFIP---FKELCNHFVERVRRNKR 111
V+IAK+ A + F +L + R+ R R
Sbjct: 85 VVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|302393079|ref|YP_003828899.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
gi|302205156|gb|ADL13834.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
Length = 117
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+GF+V+KK G AV RNR++R LKE R ++ + D VLI ++ ++E+
Sbjct: 48 RIGFSVSKKIGNAVVRNRIKRILKEIYRRNKNKLITNI-DLVLIGRKRISDSSYQEI 103
>gi|289523250|ref|ZP_06440104.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503793|gb|EFD24957.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 126
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R +F L+ ++G+ +G + + + R+G V KKQG + RNR RR LK
Sbjct: 3 LRRREEFDLLFREGKRARGAYVRMLYIKAPEGAGT-RIGVAVGKKQGKSCVRNRGRRLLK 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK--RSYYSGKNFS 120
EA R LK G+ VL L +++ + RR R+ + G +F+
Sbjct: 62 EAARRLLP-WLKEGYWIVLQLSSAGLTKGARDIYFDMGDLWRREGLMRADWPGADFT 117
>gi|187934705|ref|YP_001887737.1| ribonuclease P [Clostridium botulinum B str. Eklund 17B]
gi|238691668|sp|B2TRI3|RNPA_CLOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|187722858|gb|ACD24079.1| ribonuclease P protein component [Clostridium botulinum B str.
Eklund 17B]
Length = 125
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKE 97
+VG +V+KK G +V R++ +R L E+ RL +LK G+D V +A+ RD+ + ++
Sbjct: 45 SKVGISVSKKVGNSVVRSKCKRLLSESFRLNYNNILK-GYDCVFVARNPIRDSNYFETEK 103
Query: 98 LCNHFVER 105
+ +++
Sbjct: 104 AMKNLIKK 111
>gi|258541761|ref|YP_003187194.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256632839|dbj|BAH98814.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256635896|dbj|BAI01865.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-03]
gi|256638951|dbj|BAI04913.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-07]
gi|256642005|dbj|BAI07960.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-22]
gi|256645060|dbj|BAI11008.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-26]
gi|256648115|dbj|BAI14056.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-32]
gi|256651168|dbj|BAI17102.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654159|dbj|BAI20086.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-12]
Length = 126
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR+QF L +G P L++ ++++ RVGFTVTKK G +V RNR+RRRL+
Sbjct: 20 LKKRKQFLFLASRGRKAPVPGLVLQLFRRPDADVA-RVGFTVTKKVGNSVVRNRVRRRLR 78
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E VR+ +G D VLI + + PF L F
Sbjct: 79 EVVRIVEADTPLNGLDLVLIGRGATINRPFTALVADF 115
>gi|255507400|ref|ZP_05383039.1| ribonuclease P [Chlamydia trachomatis D(s)2923]
gi|289525828|emb|CBJ15309.1| ribonuclease P protein component [Chlamydia trachomatis Sweden2]
gi|296435408|gb|ADH17586.1| ribonuclease P [Chlamydia trachomatis E/150]
gi|296439125|gb|ADH21278.1| ribonuclease P [Chlamydia trachomatis E/11023]
Length = 120
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRSGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|262277965|ref|ZP_06055758.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
gi|262225068|gb|EEY75527.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
Length = 117
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFT--VTKKQGCAVERNRMRRRL 64
L ++F V G+ F++ N NNS+ + + KK G AV+RNRMRRRL
Sbjct: 10 LSGSKEFKEVLSGKKISSNLFTIFYKNKNNSDQNKEILLSCVAAKKLGNAVKRNRMRRRL 69
Query: 65 KEAVRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
K A R + K Y + AK F+ + N ++R
Sbjct: 70 KMATRKAIIEIKNNFKKKFKYAIFAKPKIYDENFQNIVNELTSKLR 115
>gi|329114455|ref|ZP_08243217.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
gi|326696531|gb|EGE48210.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
Length = 127
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR+QF L +G P L++ ++++ RVGFTVTKK G +V RNR+RRRL+
Sbjct: 21 LKKRKQFLFLASRGRKAPVPGLVLQLFRRPDTDVA-RVGFTVTKKVGNSVVRNRVRRRLR 79
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
E VR+ +G D VLI + + PF L F
Sbjct: 80 EVVRIVEADTPLNGLDLVLIGRSATINRPFVALVADF 116
>gi|229822698|ref|YP_002884224.1| ribonuclease P protein component [Beutenbergia cavernae DSM
12333]
gi|259494100|sp|C5C6N8|RNPA_BEUC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229568611|gb|ACQ82462.1| ribonuclease P protein component [Beutenbergia cavernae DSM
12333]
Length = 119
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLK 65
PRVGF V+K G AV RNR++RRL+
Sbjct: 42 PRVGFVVSKAVGGAVVRNRVKRRLR 66
>gi|282889814|ref|ZP_06298353.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281500388|gb|EFB42668.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 86
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
R+G TV+KK G A +RNR +R ++EA R C + H
Sbjct: 13 RLGITVSKKYGKAHDRNRFKRTVREAFRTCHHLLPPH 49
>gi|268610506|ref|ZP_06144233.1| ribonuclease P protein component [Ruminococcus flavefaciens FD-1]
Length = 122
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
I+ + F L KKG + + V N R+G T KK G AV RNR +R +
Sbjct: 6 IMNDNKDFLTLYKKGRYAASKYSVIYVRPNGRP--FNRLGITAGKKVGNAVCRNRAKRLI 63
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+ A R +E + G D V++A+ I +E C +
Sbjct: 64 RLAYRQ-SEVDMPVGMDIVIVARTAITTIKSQEYCGYM 100
>gi|169351634|ref|ZP_02868572.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
gi|169291856|gb|EDS73989.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
Length = 112
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+G +V+KK G AV RN+++R+++ V+ L +DY++I + L + F
Sbjct: 40 ARIGISVSKKLGKAVIRNKIKRQVRMIVKETIN--LDDNYDYIVIVRNKFLDLNFTSNLK 97
Query: 101 HF 102
F
Sbjct: 98 EF 99
>gi|323465555|gb|ADX77708.1| ribonuclease P protein component [Staphylococcus pseudintermedius
ED99]
Length = 115
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+G +V+KK G AV RNR++R ++E ++ E +L D ++IA+
Sbjct: 42 RLGISVSKKLGNAVTRNRIKRSIRECFKVHKEDIL--PKDIIVIAR 85
>gi|319891292|ref|YP_004148167.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
gi|317160988|gb|ADV04531.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
Length = 115
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+G +V+KK G AV RNR++R ++E ++ E +L D ++IA+
Sbjct: 42 RLGISVSKKLGNAVTRNRIKRSIRECFKVHKEDIL--PKDIIVIAR 85
>gi|320354722|ref|YP_004196061.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
gi|320123224|gb|ADW18770.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
Length = 111
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRR 62
+L+K +F V + G+ +G F++ V+ N LP R+G +V +K G AV RNR++R
Sbjct: 11 LLRKTGEFQRVYRSGQRHRGNGFTVIVM----PNTLPWNRLGISVQRKTGNAVRRNRVKR 66
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
++E RL G D V+ + D F L
Sbjct: 67 LVREVFRL-NRGDFPAHCDVVIAVRPDFSLDSFAAL 101
>gi|163814990|ref|ZP_02206377.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
gi|158449673|gb|EDP26668.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
Length = 155
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MS + LK R+F V + + L +N + R+G +V+KK G +V R+R+
Sbjct: 43 MSKVISLKNSREFGSVYNTRNSVANKYLVMYLRSNGLDY-NRLGISVSKKVGNSVVRHRV 101
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R ++EA RL + G+D V++A+
Sbjct: 102 TRLIREAYRL-NRANIDVGYDIVIVAR 127
>gi|76789526|ref|YP_328612.1| ribonuclease P [Chlamydia trachomatis A/HAR-13]
gi|237803214|ref|YP_002888408.1| ribonuclease P [Chlamydia trachomatis B/Jali20/OT]
gi|237805135|ref|YP_002889289.1| ribonuclease P [Chlamydia trachomatis B/TZ1A828/OT]
gi|123606588|sp|Q3KKQ8|RNPA_CHLTA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76168056|gb|AAX51064.1| ribonuclease P protein component [Chlamydia trachomatis A/HAR-13]
gi|231273435|emb|CAX10350.1| ribonuclease P protein component [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274448|emb|CAX11243.1| ribonuclease P protein component [Chlamydia trachomatis
B/Jali20/OT]
Length = 120
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|325686635|gb|EGD28661.1| ribonuclease P protein component [Streptococcus sanguinis SK72]
Length = 119
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +EL H
Sbjct: 41 RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKQLVQ--ADFVVIARKGV-----EELDYH 93
Query: 102 FVER----VRRNKRSYYSG 116
VE+ V +N + Y G
Sbjct: 94 QVEQNLLHVLKNAKLYQEG 112
>gi|242278538|ref|YP_002990667.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
gi|259494103|sp|C6C0J4|RNPA_DESAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|242121432|gb|ACS79128.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
Length = 124
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L VL + + R+G TV++K+G AV RNR++R L+ R+ E + + D +++
Sbjct: 33 FILFVLCHGSGPSGVRLGLTVSRKKGPAVVRNRIKRVLRSYFRINQE-IFQVRADIIIVP 91
Query: 87 KR 88
KR
Sbjct: 92 KR 93
>gi|83313453|ref|YP_423717.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
gi|123540375|sp|Q2VZ17|RNPA_MAGSA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|82948294|dbj|BAE53158.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
Length = 133
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 7 LKKRRQFALVKKGELRK---GPFFSLEVLNNNNSNLLP---RVGFTVTKKQGCAVERNRM 60
LKKR F ++ LR+ P L+ + ++L RVGFTV+KK G +V RNR
Sbjct: 8 LKKRADF--LRVAALRRKWAAPGLILQAAPASGTDLQADSLRVGFTVSKKVGNSVCRNRA 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
RRRL+EAV G DYV+I +++ L P+
Sbjct: 66 RRRLREAVAQVFPAHASAGLDYVVIGRKETLERPY 100
>gi|313112580|ref|ZP_07798241.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625102|gb|EFQ08396.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 167
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P + VL + RVG T TKK G AV+RNR RR +K A+ + + G+D +
Sbjct: 56 PGLVMYVLKTRSKKT--RVGLTATKKIGHAVQRNRARRVMKAAIDEHLDYNI-GGYDLIF 112
Query: 85 IAK 87
+A+
Sbjct: 113 VAR 115
>gi|260584255|ref|ZP_05852002.1| ribonuclease P [Granulicatella elegans ATCC 700633]
gi|260157773|gb|EEW92842.1| ribonuclease P [Granulicatella elegans ATCC 700633]
Length = 128
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
F ++ +N S+ RVG +V+KK G AV RNR++R ++ +V + L+ D+++I
Sbjct: 28 FVVYQIDKSNQSHF--RVGISVSKKLGNAVVRNRIKRLIR-SVLTELKPQLQSEIDFIVI 84
Query: 86 AKRDALFIPFKEL 98
A++ + + ++E+
Sbjct: 85 ARKPVVSMNYQEV 97
>gi|256848508|ref|ZP_05553950.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
gi|256714775|gb|EEU29754.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
Length = 119
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++ + L + LK D+++IA+ A + E +
Sbjct: 47 RVGISVGKKIGNAVHRNWLKRRIRQTL-LEVKPQLKSEVDFLVIARPAADGMTMAETKKN 105
Query: 102 FVERVRR 108
V ++R
Sbjct: 106 LVHALKR 112
>gi|209693638|ref|YP_002261566.1| ribonuclease P [Aliivibrio salmonicida LFI1238]
gi|226741384|sp|B6EP41|RNPA_ALISL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|208007589|emb|CAQ77689.1| ribonuclease P protein component (RNase P protein) [Aliivibrio
salmonicida LFI1238]
Length = 117
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCA 72
++ K+ P F+ +L NS PR+G V KKQ AV RN+ +R +E+ R
Sbjct: 19 SVFKQAHRAGSPHFT--ILARENSLSHPRLGLAVPKKQIKTAVGRNKFKRITRESFRNKQ 76
Query: 73 EGVLKHGHDYVLIAKRDALFIP---FKELCNHFVERVRRNKR 111
+ D+V+IAK+ A + F +L + R+ R R
Sbjct: 77 HSLP--AKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|15605517|ref|NP_220303.1| ribonuclease P [Chlamydia trachomatis D/UW-3/CX]
gi|255311619|ref|ZP_05354189.1| ribonuclease P [Chlamydia trachomatis 6276]
gi|255317920|ref|ZP_05359166.1| ribonuclease P [Chlamydia trachomatis 6276s]
gi|9789779|sp|O84789|RNPA_CHLTR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3329249|gb|AAC68379.1| Ribonuclease P Protein Component [Chlamydia trachomatis
D/UW-3/CX]
gi|296437264|gb|ADH19434.1| ribonuclease P [Chlamydia trachomatis G/11222]
gi|297748912|gb|ADI51458.1| Ribonuclease P protein component [Chlamydia trachomatis D-EC]
gi|297749792|gb|ADI52470.1| Ribonuclease P protein component [Chlamydia trachomatis D-LC]
Length = 120
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|209965567|ref|YP_002298482.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
gi|209959033|gb|ACI99669.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
Length = 179
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFT +KK G AVERNR RRRL+ AV G+D+VL+A+ + + P+ +L N
Sbjct: 69 RVGFTASKKVGGAVERNRARRRLRAAVAEVLAPHAAAGYDFVLVARGETVRRPWPDLKND 128
Query: 102 FVERVRRNK 110
++R K
Sbjct: 129 LATALKRLK 137
>gi|327462708|gb|EGF09030.1| ribonuclease P protein component [Streptococcus sanguinis SK1057]
gi|332365879|gb|EGJ43636.1| ribonuclease P protein component [Streptococcus sanguinis SK355]
Length = 119
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ KKG+ F + +L + RVG +V+KK G AV RNR++R+++ + +
Sbjct: 15 AIFKKGQSFANRKFVVYMLEKEQKHF--RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQK 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+++ D+V+IA++ +EL H VE+
Sbjct: 73 QLVQ--ADFVVIARKGV-----EELDYHQVEQ 97
>gi|317154271|ref|YP_004122319.1| ribonuclease P protein component [Desulfovibrio aespoeensis
Aspo-2]
gi|316944522|gb|ADU63573.1| ribonuclease P protein component [Desulfovibrio aespoeensis
Aspo-2]
Length = 123
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L VL ++ R+G TV++K G AV RNR++R ++E RL H +D+ L
Sbjct: 33 FILFVLRRDDGPSGLRLGLTVSRKMGNAVARNRIKRVVREYFRL-------HQYDFEL-- 83
Query: 87 KRDALFIPFKEL 98
D + +P + L
Sbjct: 84 PLDIVVVPKRNL 95
>gi|296105490|ref|YP_003615636.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059949|gb|ADF64687.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 108
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
F V + LR G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 6 HFTFVFQQPLRAGTP-QITILGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 65 RQHEL--PSMDFVVVAKK 80
>gi|259502132|ref|ZP_05745034.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
gi|259169945|gb|EEW54440.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
Length = 118
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++++ L + L+ D+++IA+ A + E+ +
Sbjct: 42 RVGISVGKKIGNAVHRNWVKRRIRQSL-LEVKPQLRSDVDFLVIARPAADGLEMAEVKKN 100
Query: 102 FVERVRR 108
V ++R
Sbjct: 101 LVHALKR 107
>gi|78357439|ref|YP_388888.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|123741238|sp|Q30YQ3|RNPA_DESDG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78219844|gb|ABB39193.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 125
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + L + + R G V++K G AV RNR +R L+E RL + + G D V++
Sbjct: 29 FIVFALEREGAAPVWRYGLAVSRKVGDAVRRNRTKRVLREFFRLYQDD-MPGGMDLVVVP 87
Query: 87 KR 88
KR
Sbjct: 88 KR 89
>gi|323700639|ref|ZP_08112551.1| ribonuclease P protein component [Desulfovibrio sp. ND132]
gi|323460571|gb|EGB16436.1| ribonuclease P protein component [Desulfovibrio desulfuricans
ND132]
Length = 123
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F L +L ++ R+G TV+KK G AV RNR++R ++E RL H D+ L
Sbjct: 33 FILFILKRSSPGPGIRLGLTVSKKMGHAVARNRIKRVVREYFRL-------HQFDFDL-- 83
Query: 87 KRDALFIP 94
D + +P
Sbjct: 84 PLDVVVVP 91
>gi|296436334|gb|ADH18508.1| ribonuclease P [Chlamydia trachomatis G/9768]
gi|296438193|gb|ADH20354.1| ribonuclease P [Chlamydia trachomatis G/11074]
gi|297140694|gb|ADH97452.1| ribonuclease P [Chlamydia trachomatis G/9301]
Length = 120
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR +R ++
Sbjct: 12 LLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNRFKRIVR 70
Query: 66 EAVR 69
EA R
Sbjct: 71 EAFR 74
>gi|85712626|ref|ZP_01043673.1| RNase P protein component [Idiomarina baltica OS145]
gi|85693617|gb|EAQ31568.1| RNase P protein component [Idiomarina baltica OS145]
Length = 88
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 41 PRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
PR+G T++KK+ AV RNR +R+++E RL + D V+IAK
Sbjct: 11 PRIGVTISKKRAKTAVARNRFKRQVRETFRLKQHNI--PAFDIVVIAK 56
>gi|169832374|ref|YP_001718356.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
gi|169639218|gb|ACA60724.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
Length = 109
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M I I K R + +G R L + N R G TV++K G AV RNR+
Sbjct: 1 MGIITIKKNRDYRQVFTRGRYRSDRLLVLYRMANGTGGR--RFGITVSRKLGGAVVRNRV 58
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
RRRLKE RL E G+DYV++A+ P C+H V
Sbjct: 59 RRRLKEICRLNPE-AFPSGYDYVIVAR------PPAAECDHRV 94
>gi|326386365|ref|ZP_08207988.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209026|gb|EGD59820.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
Length = 119
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAK 87
R G TVT+K G AV RNRM+RR + +R L G+ G D+VLI +
Sbjct: 15 RFGVTVTRKIGNAVFRNRMKRRFRALLREILPTRGLA--GADHVLIGR 60
>gi|226315532|ref|YP_002775428.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
gi|254808054|sp|C0ZA70|RNPA_BREBN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226098482|dbj|BAH46924.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
Length = 126
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK QF A+ ++G F L R G +V+KK G AV RNR++R ++
Sbjct: 7 LKKNEQFQAVFQRGSSAANKQFVLYSAKQEGQAAF-RAGISVSKKIGNAVVRNRVKRLIR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
EAV E + G D V+IA+ + + + + ++R K
Sbjct: 66 EAVARM-ESDIPVGLDLVIIARPGVEAMTLEAIEQSLLHVMKRAK 109
>gi|291548770|emb|CBL25032.1| ribonuclease P protein component [Ruminococcus torques L2-14]
Length = 111
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R+G +V+KK G +V R+ + R ++E+ RL E + G+D V+IA+ A
Sbjct: 41 RLGISVSKKVGNSVVRHHLTRLIRESYRLSEEH-FRCGYDIVVIARTSA 88
>gi|319744393|gb|EFV96752.1| ribonuclease P protein component [Streptococcus agalactiae ATCC
13813]
Length = 129
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN ++R+++ L ++ +D+V+IA++ + ++ L +
Sbjct: 61 RVGISVSKKLGNAVVRNAIKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKN 118
Query: 102 FV 103
+
Sbjct: 119 LI 120
>gi|238921765|ref|YP_002935280.1| ribonuclease P protein component, [Edwardsiella ictaluri 93-146]
gi|259494106|sp|C5BF62|RNPA_EDWI9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238871334|gb|ACR71045.1| ribonuclease P protein component, putative [Edwardsiella ictaluri
93-146]
Length = 119
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L +L NS PR+G TV KK A ERNR++R +E+ RL + D+V+I
Sbjct: 32 QLTILGRMNSLGYPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHSL--PAMDFVVIV 89
Query: 87 KR 88
K+
Sbjct: 90 KK 91
>gi|121635909|ref|YP_976132.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|121639834|ref|YP_980058.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663790|ref|YP_001285313.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148825131|ref|YP_001289885.1| ribonuclease P [Mycobacterium tuberculosis F11]
gi|224992329|ref|YP_002647019.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800973|ref|YP_003033975.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|254366459|ref|ZP_04982503.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|254548927|ref|ZP_05139374.1| ribonuclease P [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260184852|ref|ZP_05762326.1| ribonuclease P [Mycobacterium tuberculosis CPHL_A]
gi|260198983|ref|ZP_05766474.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|260203136|ref|ZP_05770627.1| ribonuclease P [Mycobacterium tuberculosis K85]
gi|289441366|ref|ZP_06431110.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289445524|ref|ZP_06435268.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289567880|ref|ZP_06448107.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289572575|ref|ZP_06452802.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289747767|ref|ZP_06507145.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289748461|ref|ZP_06507839.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289756058|ref|ZP_06515436.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289760096|ref|ZP_06519474.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|289764114|ref|ZP_06523492.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|294995605|ref|ZP_06801296.1| ribonuclease P [Mycobacterium tuberculosis 210]
gi|297636610|ref|ZP_06954390.1| ribonuclease P [Mycobacterium tuberculosis KZN 4207]
gi|297733605|ref|ZP_06962723.1| ribonuclease P [Mycobacterium tuberculosis KZN R506]
gi|298527395|ref|ZP_07014804.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|313660936|ref|ZP_07817816.1| ribonuclease P [Mycobacterium tuberculosis KZN V2475]
gi|2808708|emb|CAA16236.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium tuberculosis
H37Rv]
gi|31620694|emb|CAD96140.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium bovis AF2122/97]
gi|121491556|emb|CAL70013.1| Ribonuclease p protein component rnpA (RNaseP) [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|121495482|emb|CAL73971.1| Ribonuclease P protein component rnpA [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|134151971|gb|EBA44016.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|148507942|gb|ABQ75751.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148723658|gb|ABR08283.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
F11]
gi|224775445|dbj|BAH28251.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322477|gb|ACT27080.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|289414285|gb|EFD11525.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289418482|gb|EFD15683.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289537006|gb|EFD41584.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289541633|gb|EFD45282.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289688295|gb|EFD55783.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289689048|gb|EFD56477.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289696645|gb|EFD64074.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289711620|gb|EFD75636.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|289715660|gb|EFD79672.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|298497189|gb|EFI32483.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|326905756|gb|EGE52689.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
W-148]
gi|328460701|gb|AEB06124.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 4207]
Length = 125
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLI 85
PRVG + K G AVER+R+ RRL+ A ++K H D+V+I
Sbjct: 50 PRVGLIIAKSVGSAVERHRVARRLRH----VAGSIVKELHPSDHVVI 92
>gi|167748058|ref|ZP_02420185.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|317472416|ref|ZP_07931741.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
gi|167652050|gb|EDR96179.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|316900136|gb|EFV22125.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
Length = 115
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R G +V+KK G +V R+R+ R L+E+ RL E K G D V+IA+
Sbjct: 41 RFGISVSKKVGNSVVRHRVTRLLRESYRL-RESEFKQGFDLVVIAR 85
>gi|332533702|ref|ZP_08409561.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036866|gb|EGI73327.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
Length = 140
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
PFF+L L N PR+G TV KK+ A +RNR++R +E+ RL + D V
Sbjct: 31 PFFTL--LAKPNDQEKPRLGLTVAKKRVKKACQRNRIKRLARESFRLNQHSI--DNIDIV 86
Query: 84 LIAK 87
L+ K
Sbjct: 87 LMVK 90
>gi|289705894|ref|ZP_06502273.1| ribonuclease P protein component [Micrococcus luteus SK58]
gi|289557379|gb|EFD50691.1| ribonuclease P protein component [Micrococcus luteus SK58]
Length = 132
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+ + S PR GF V+K G AV RNR++RRL+ V
Sbjct: 42 STSPSAPRPRAGFVVSKAVGNAVTRNRVKRRLRAVV 77
>gi|237743158|ref|ZP_04573639.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|256027565|ref|ZP_05441399.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|260495362|ref|ZP_05815489.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289765524|ref|ZP_06524902.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|229433454|gb|EEO43666.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|260197140|gb|EEW94660.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289717079|gb|EFD81091.1| ribonuclease P protein component [Fusobacterium sp. D11]
Length = 111
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R GF +KK G A RNR++R +E +RL L +D +++AK+
Sbjct: 37 SRFGFVASKKIGKAFCRNRIKRLFREYIRLNINK-LNDNYDIIIVAKK 83
>gi|239918806|ref|YP_002958364.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|281414967|ref|ZP_06246709.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|133181|sp|P21172|RNPA_MICLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494112|sp|C5C7X2|RNPA_MICLC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|455290|gb|AAA25313.1| ribonuclease P (rnpA) [Micrococcus luteus]
gi|239840013|gb|ACS31810.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
Length = 132
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+ + S PR GF V+K G AV RNR++RRL+ V
Sbjct: 42 STSPSAPRPRAGFVVSKAVGNAVTRNRVKRRLRAVV 77
>gi|304437934|ref|ZP_07397880.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369074|gb|EFM22753.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 130
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++K+R F V +KG G L VL + + +VGF KK GCA R+R +R L
Sbjct: 13 MIKRRSDFQCVYQKGRSVAGRSMILYVLRD--PRVAGKVGFAAGKKLGCAAVRSRTKRLL 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK 87
+EA R C + L+ +LI +
Sbjct: 71 REAYR-CLQHELRGDVGILLIGR 92
>gi|256545948|ref|ZP_05473303.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
gi|256398370|gb|EEU11992.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
Length = 116
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
V NN PR GF+++KK G A +RN+++RRL+ V
Sbjct: 27 DFTVFIKNNGVNRPRFGFSISKKIGKANQRNKLKRRLRAIV 67
>gi|212697390|ref|ZP_03305518.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325846384|ref|ZP_08169353.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|212675582|gb|EEB35189.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325481568|gb|EGC84608.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 116
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
V NN PR GF+++KK G A +RN+++RRL+ V
Sbjct: 27 DFTVFIKNNGVNRPRFGFSISKKIGKANQRNKLKRRLRAIV 67
>gi|296328800|ref|ZP_06871314.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154135|gb|EFG94939.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 112
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R GF +KK G A RNR++R +E +RL + +D +++AK+
Sbjct: 38 SRFGFVASKKVGKAFCRNRIKRLFREYIRLNINKI-NDNYDIIIVAKK 84
>gi|167969461|ref|ZP_02551738.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|215413851|ref|ZP_03422516.1| ribonuclease P [Mycobacterium tuberculosis 94_M4241A]
gi|215432904|ref|ZP_03430823.1| ribonuclease P [Mycobacterium tuberculosis EAS054]
gi|215448270|ref|ZP_03435022.1| ribonuclease P [Mycobacterium tuberculosis T85]
gi|219555770|ref|ZP_03534846.1| ribonuclease P [Mycobacterium tuberculosis T17]
Length = 95
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLI 85
PRVG + K G AVER+R+ RRL+ A ++K H D+V+I
Sbjct: 20 PRVGLIIAKSVGSAVERHRVARRLRH----VAGSIVKELHPSDHVVI 62
>gi|254302382|ref|ZP_04969740.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322574|gb|EDK87824.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 111
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R GF +KK G A RNR++R +E ++L + + +D +++AK+
Sbjct: 37 SRFGFVASKKVGKAFCRNRIKRLFREYIKLNIDKI-NDNYDIIIVAKK 83
>gi|311065164|ref|YP_003971890.1| ribonuclease P protein component RnpA [Bifidobacterium bifidum
PRL2010]
gi|310867484|gb|ADP36853.1| RnpA Ribonuclease P protein component [Bifidobacterium bifidum
PRL2010]
Length = 123
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+++++ R+G V+K G AV RNR++RR + R E +L D V+ AK A + F
Sbjct: 41 SADIMRRMGLAVSKAVGNAVTRNRVKRRFRVLARRY-EDMLPMQCDIVVRAKPSASRVDF 99
Query: 96 KELCNHF 102
+L F
Sbjct: 100 ADLDRQF 106
>gi|228474208|ref|ZP_04058945.1| ribonuclease P protein component [Staphylococcus hominis SK119]
gi|228271903|gb|EEK13240.1| ribonuclease P protein component [Staphylococcus hominis SK119]
Length = 114
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ KKG+ F + L N + R+G +V+KK G AV RNR++R ++E ++ +
Sbjct: 16 IYKKGKSVANRQFVVYTLKNEYEHF--RLGISVSKKIGNAVTRNRIKRAIRENFKVHKQD 73
Query: 75 VLKHGHDYVLIAKRDA 90
++ D ++IA++ A
Sbjct: 74 MI--SKDIIVIARQPA 87
>gi|71891806|ref|YP_277535.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123641224|sp|Q494B8|RNPA_BLOPB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71795912|gb|AAZ40663.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 115
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
PR+G ++KK A ERNR++R ++E R C +L D+VL
Sbjct: 45 PRIGLAISKKYVKYAHERNRIKRHIRETFRTCQHNLL--AKDFVL 87
>gi|314935199|ref|ZP_07842552.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
gi|313656534|gb|EFS20273.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
Length = 114
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ KKG+ F + L N + R+G +V+KK G AV RNR++R ++E ++ +
Sbjct: 16 IYKKGKSVANRQFVVYTLKNEYEHF--RLGISVSKKIGNAVTRNRIKRAIRENFKVHKQD 73
Query: 75 VLKHGHDYVLIAKRDA 90
++ D ++IA++ A
Sbjct: 74 MI--SKDIIVIARQPA 87
>gi|282601448|ref|ZP_06258054.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
gi|282569119|gb|EFB74654.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
Length = 143
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH--GHDYVLIAK 87
R+G T TKK G AV+RNR RR ++ A+ +E + ++ G+D +L+A+
Sbjct: 56 RIGLTATKKVGHAVQRNRCRRVMRAAL---SEHLSQNIGGYDIILVAR 100
>gi|68249583|ref|YP_248695.1| ribonuclease P [Haemophilus influenzae 86-028NP]
gi|145630096|ref|ZP_01785878.1| ribonuclease P [Haemophilus influenzae R3021]
gi|145632384|ref|ZP_01788119.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148828169|ref|YP_001292922.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229846056|ref|ZP_04466168.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|319775068|ref|YP_004137556.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
gi|81335988|sp|Q4QLR2|RNPA_HAEI8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226720|sp|A5UID3|RNPA_HAEIG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68057782|gb|AAX88035.1| ribonuclease P protein component [Haemophilus influenzae
86-028NP]
gi|144984377|gb|EDJ91800.1| ribonuclease P [Haemophilus influenzae R3021]
gi|144987291|gb|EDJ93821.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148719411|gb|ABR00539.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229811060|gb|EEP46777.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|317449659|emb|CBY85865.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
Length = 119
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
>gi|260581923|ref|ZP_05849719.1| ribonuclease P [Haemophilus influenzae NT127]
gi|260095116|gb|EEW79008.1| ribonuclease P [Haemophilus influenzae NT127]
Length = 119
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
>gi|260580089|ref|ZP_05847919.1| ribonuclease P [Haemophilus influenzae RdAW]
gi|260093373|gb|EEW77306.1| ribonuclease P [Haemophilus influenzae RdAW]
Length = 128
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 54 PRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRLP--AYDFVFVAK 99
>gi|15843557|ref|NP_338594.1| ribonuclease P [Mycobacterium tuberculosis CDC1551]
gi|161352458|ref|NP_218440.2| ribonuclease P [Mycobacterium tuberculosis H37Rv]
gi|161511523|ref|NP_857589.2| ribonuclease P [Mycobacterium bovis AF2122/97]
gi|254233405|ref|ZP_04926731.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289556191|ref|ZP_06445401.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308232613|ref|ZP_07664134.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308369279|ref|ZP_07666710.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308371504|ref|ZP_07667186.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308371554|ref|ZP_07667205.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308372784|ref|ZP_07667458.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308373865|ref|ZP_07433895.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308375036|ref|ZP_07667931.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308376283|ref|ZP_07668242.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308378518|ref|ZP_07668777.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308379668|ref|ZP_07669018.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308380867|ref|ZP_07669311.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|61234238|sp|P0A5X8|RNPA_MYCTU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|61234242|sp|P0A5X9|RNPA_MYCBO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1321902|emb|CAA63255.1| rnpA [Mycobacterium tuberculosis H37Rv]
gi|13883935|gb|AAK48408.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551]
gi|124603198|gb|EAY61473.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289440823|gb|EFD23316.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308213437|gb|EFO72836.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308328154|gb|EFP17005.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308328616|gb|EFP17467.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308336271|gb|EFP25122.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308339877|gb|EFP28728.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308343889|gb|EFP32740.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308347673|gb|EFP36524.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308351591|gb|EFP40442.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308352298|gb|EFP41149.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308356301|gb|EFP45152.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308360188|gb|EFP49039.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|323717339|gb|EGB26544.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551A]
Length = 116
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLI 85
PRVG + K G AVER+R+ RRL+ A ++K H D+V+I
Sbjct: 41 PRVGLIIAKSVGSAVERHRVARRLRH----VAGSIVKELHPSDHVVI 83
>gi|19703354|ref|NP_602916.1| ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|22001933|sp|Q8RHA6|RNPA_FUSNN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|19713416|gb|AAL94215.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 111
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R GF +KK G A RNR++R +E +RL + +D +++AK+
Sbjct: 37 SRFGFIASKKVGKAFCRNRIKRLFREYIRLNINKI-NDNYDIIIVAKK 83
>gi|1075286|pir||F64107 ribonuclease P (EC 3.1.26.5) protein component - Haemophilus
influenzae (strain Rd KW20)
Length = 136
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 62 PRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 107
>gi|215405981|ref|ZP_03418162.1| ribonuclease P [Mycobacterium tuberculosis 02_1987]
gi|215425185|ref|ZP_03423104.1| ribonuclease P [Mycobacterium tuberculosis T92]
gi|218755715|ref|ZP_03534511.1| ribonuclease P [Mycobacterium tuberculosis GM 1503]
gi|308406289|ref|ZP_07495838.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
gi|308363875|gb|EFP52726.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
Length = 99
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK--HGHDYVLI 85
PRVG + K G AVER+R+ RRL+ A ++K H D+V+I
Sbjct: 24 PRVGLIIAKSVGSAVERHRVARRLRH----VAGSIVKELHPSDHVVI 66
>gi|326329127|ref|ZP_08195455.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
gi|325953014|gb|EGD45026.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
Length = 117
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
P+VGF V+K G AV RNR++RRL+ R G+
Sbjct: 48 PQVGFVVSKAVGPAVVRNRVKRRLRHQARESLSGL 82
>gi|319897490|ref|YP_004135687.1| ribonuclease p protein component [Haemophilus influenzae F3031]
gi|329123021|ref|ZP_08251592.1| ribonuclease P protein component [Haemophilus aegyptius ATCC
11116]
gi|317432996|emb|CBY81367.1| Ribonuclease P protein component [Haemophilus influenzae F3031]
gi|327471952|gb|EGF17392.1| ribonuclease P protein component [Haemophilus aegyptius ATCC
11116]
Length = 119
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
>gi|187735750|ref|YP_001877862.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
gi|187425802|gb|ACD05081.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
Length = 115
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
QFA V+ +G G L + + G TKK GCAV RN++RRR++E +R
Sbjct: 6 QFARVRNEGPSVAGRLIVLSAAPLEHPEEPSKFGIICTKKIGCAVVRNKLRRRVREILR 64
>gi|16272935|ref|NP_439161.1| ribonuclease P [Haemophilus influenzae Rd KW20]
gi|145628058|ref|ZP_01783859.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145634174|ref|ZP_01789885.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145637304|ref|ZP_01792965.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145638180|ref|ZP_01793790.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145640674|ref|ZP_01796257.1| ribonuclease P [Haemophilus influenzae R3021]
gi|229843942|ref|ZP_04464083.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|2507338|sp|P44306|RNPA_HAEIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1574030|gb|AAC22661.1| ribonuclease P (rnpA) [Haemophilus influenzae Rd KW20]
gi|144979833|gb|EDJ89492.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145268618|gb|EDK08611.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145269556|gb|EDK09498.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145272509|gb|EDK12416.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145274600|gb|EDK14463.1| ribonuclease P [Haemophilus influenzae 22.4-21]
gi|229812936|gb|EEP48624.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|309751336|gb|ADO81320.1| Ribonuclease P, protein component [Haemophilus influenzae R2866]
gi|309973502|gb|ADO96703.1| Ribonuclease P, protein component [Haemophilus influenzae R2846]
Length = 119
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 45 PRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
>gi|224283950|ref|ZP_03647272.1| ribonuclease P protein component [Bifidobacterium bifidum NCIMB
41171]
gi|313141102|ref|ZP_07803295.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
gi|313133612|gb|EFR51229.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
Length = 123
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+++++ R+G V+K G AV RNR++RR + R E +L D V+ AK A + F
Sbjct: 41 SADIMRRMGLAVSKAVGNAVTRNRVKRRFRVLARRY-EDMLPMQCDIVVRAKPSASRVDF 99
Query: 96 KELCNHF 102
+L F
Sbjct: 100 ADLDRQF 106
>gi|22536591|ref|NP_687442.1| ribonuclease P [Streptococcus agalactiae 2603V/R]
gi|76788039|ref|YP_329127.1| ribonuclease P [Streptococcus agalactiae A909]
gi|76799480|ref|ZP_00781621.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77407079|ref|ZP_00784082.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
gi|77412331|ref|ZP_00788644.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77414748|ref|ZP_00790875.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|29427732|sp|Q8E1E7|RNPA_STRA5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123602349|sp|Q3K2X6|RNPA_STRA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|22533427|gb|AAM99314.1|AE014210_4 ribonuclease P protein component [Streptococcus agalactiae 2603V/R]
gi|76563096|gb|ABA45680.1| ribonuclease P protein component [Streptococcus agalactiae A909]
gi|76585170|gb|EAO61787.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77159198|gb|EAO70382.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|77161620|gb|EAO72618.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77174310|gb|EAO77176.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
Length = 109
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN ++R+++ L ++ +D+V+IA++ + ++ L +
Sbjct: 41 RVGISVSKKLGNAVVRNAIKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKN 98
Query: 102 FV 103
+
Sbjct: 99 LI 100
>gi|258406261|ref|YP_003199003.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
gi|257798488|gb|ACV69425.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
Length = 130
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + VL R+G V+KK G AVERNR++R L+E RL + D V++A
Sbjct: 33 FIVYVLPRGKDGAGCRLGTAVSKKTGNAVERNRVKRLLREFFRLHHQSWCLDC-DIVVVA 91
Query: 87 KRDAL 91
KR +
Sbjct: 92 KRSIV 96
>gi|312869219|ref|ZP_07729391.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
gi|311095240|gb|EFQ53512.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
Length = 118
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++++ L + L+ D+++IA+ A + E +
Sbjct: 42 RVGISVGKKIGNAVHRNWVKRRIRQSL-LEVKPQLRSDVDFLVIARPAADGLEMAETKKN 100
Query: 102 FVERVRR 108
V ++R
Sbjct: 101 LVHALKR 107
>gi|52424538|ref|YP_087675.1| ribonuclease P [Mannheimia succiniciproducens MBEL55E]
gi|60390344|sp|Q65VC0|RNPA_MANSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52306590|gb|AAU37090.1| RnpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 122
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
QF V + LR + +L N PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFKYVFEQPLRASTP-EITILARRNDLQYPRLGLTVAKKHLKRAHERNRVKRLCRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAK 87
+ +D+V++AK
Sbjct: 76 LQHEL--PNYDFVIVAK 90
>gi|254445016|ref|ZP_05058492.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
gi|198259324|gb|EDY83632.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
Length = 135
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
PR+G + ++ G +V RN+++RR +E RL + D VL ++ A ++EL
Sbjct: 51 PRIGISAARRVGNSVTRNKIKRRFRELFRLHQHDIRPEA-DIVLSLRQPAGNASYEELEQ 109
Query: 101 HFV 103
F+
Sbjct: 110 RFL 112
>gi|302336543|ref|YP_003801750.1| ribonuclease P protein component [Olsenella uli DSM 7084]
gi|301320383|gb|ADK68870.1| ribonuclease P protein component [Olsenella uli DSM 7084]
Length = 106
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K +R+F V G R + + +V F K+ G AV RNR +R L+E
Sbjct: 4 IKSKREFEKVFSGGKRVNHRLVRACVLRTDEGGFGKVAFVAPKRLGNAVYRNRCKRVLRE 63
Query: 67 AVRLCAEGVLKHGHDYVLIAKRD 89
A RL G G D +L+A R
Sbjct: 64 AARL--SGFPLEGADVILLATRQ 84
>gi|298253032|ref|ZP_06976824.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
gi|297532427|gb|EFH71313.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
Length = 135
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
FS L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL A
Sbjct: 34 FSDTFLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLR-VIAKNYESLLPAGCDVVLRA 92
Query: 87 KRDALFIPFKEL 98
K A F L
Sbjct: 93 KPSAAQSSFDSL 104
>gi|15616644|ref|NP_239856.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11134494|sp|P57130|RNPA_BUCAI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|25289268|pir||F84931 ribonuclease P (EC 3.1.26.5) protein component [imported] -
Buchnera sp. (strain APS)
gi|10038707|dbj|BAB12742.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 115
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLK 65
L F V G ++K + +L N PR+G ++ +K A RN ++R ++
Sbjct: 12 LSDSTSFQDVFNGSVKKKNTLEISILGRFNLLGHPRLGLSIPRKNIKHAHNRNLIKRLVR 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFI 93
E RL +L D+V+IAK++ LF+
Sbjct: 72 ETFRLLQYKLL--SMDFVVIAKKNILFL 97
>gi|89897805|ref|YP_521292.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
gi|89337253|dbj|BAE86848.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
Length = 117
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRL-CAEGVLKHGHDYVLIAKRDALFIPFKELC 99
R GF +KK G AV RNR +R ++E +RL AE +K + IA+ + + ++
Sbjct: 44 SRFGFIASKKVGNAVVRNRAKRLMREVIRLHLAE--MKENTQIICIARSSIKGVSYSQVE 101
Query: 100 NHFVERVRRNK 110
N ++ + + K
Sbjct: 102 NSLLKSLYKAK 112
>gi|313221481|emb|CBY32230.1| unnamed protein product [Oikopleura dioica]
Length = 1902
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
GPFFS+ V +NS + P + FT+ V E V + HD V
Sbjct: 94 GPFFSVTVPEESNSKIAPGMSFTIF-------------------VNFSPEVVKDYDHDLV 134
Query: 84 LIAKRDALFIPFK 96
+++R+ IP K
Sbjct: 135 CVSERERTVIPIK 147
>gi|94987511|ref|YP_595444.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
gi|94731760|emb|CAJ55123.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
Length = 79
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+G V+KK G AV RNR++R L+E RL E + K D V++ K +P
Sbjct: 1 MGLAVSKKIGNAVVRNRIKRLLRECFRLHQEYIPK-SVDIVVVPKYHLRLVPI 52
>gi|46447237|ref|YP_008602.1| hypothetical protein pc1603 [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400878|emb|CAF24327.1| hypothetical protein pc1603 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 109
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 7 LKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ R+Q+ + G R G + L++ N+ S+ ++G TVT++ G A +RNR +R ++
Sbjct: 1 MRTRKQYQRMANGSSRYIGRWIILDLRFNDRSH--SQLGITVTRRFGKAHQRNRFKRIVR 58
Query: 66 EAVRLC 71
EA RL
Sbjct: 59 EAFRLS 64
>gi|323486756|ref|ZP_08092075.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
gi|323399895|gb|EGA92274.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
Length = 118
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+G +V+KK G +V R+ + R ++E+ RL + V K G D V++A+ A FK++ +
Sbjct: 40 TRIGISVSKKVGNSVVRHHITRLVRESYRLNKDRV-KTGLDIVVVARAAAKESDFKKIES 98
Query: 101 HFV 103
++
Sbjct: 99 AYL 101
>gi|289450749|ref|YP_003475563.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185296|gb|ADC91721.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 128
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
M+ + ++KK +F+ V RKG + L+ N+LPR V + V + G
Sbjct: 1 MTKLIVIKKNYEFSRV----FRKGKRYIATTLS---INVLPRPRLKYNRVAYAVGRNYGS 53
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+V RNR++R +EA R A G+D ++ + F+++ +
Sbjct: 54 SVRRNRLKRLAREAYRKYAYSC-SCGYDIIITMRATESLPEFRQVADDL 101
>gi|189426687|ref|YP_001953864.1| ribonuclease P protein component [Geobacter lovleyi SZ]
gi|189422946|gb|ACD97344.1| ribonuclease P protein component [Geobacter lovleyi SZ]
Length = 123
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR-LCAEGVLKHGHDYVLIA 86
S V+ N PR+G T ++K G AV RNR++R ++E R C+ L G D +I
Sbjct: 34 SFLVVWRENGYEYPRLGITASRKTGNAVVRNRLKRHIREFFRHHCS---LLPGVDLNVIV 90
Query: 87 KRDA 90
+R A
Sbjct: 91 RRQA 94
>gi|313681704|ref|YP_004059442.1| ribonuclease p protein component [Sulfuricurvum kujiense DSM 16994]
gi|313154564|gb|ADR33242.1| ribonuclease P protein component [Sulfuricurvum kujiense DSM 16994]
Length = 114
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL--- 98
+VG+T +KK G AV RNR +RRL+ + V + G YV +AK+ PF +
Sbjct: 35 KVGYTASKKVGNAVVRNRCKRRLRALFDEFSPSV-QDGW-YVFVAKKGLFDNPFDTVRRD 92
Query: 99 CNHFVERV 106
C + ++R
Sbjct: 93 CKYVLKRT 100
>gi|78486535|ref|YP_392460.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
gi|78364821|gb|ABB42786.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
Length = 162
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 36 NSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N PR+G + KKQ +V RNR++R +E R + + G+D V++ +R +
Sbjct: 67 NDKSYPRLGLAIAKKQLAKSVWRNRVKRLARETFRQHKQAL--SGYDIVVLGRRGMQDVD 124
Query: 95 FKELCNHFVERVRRNKRS 112
+ L F +R+ ++S
Sbjct: 125 NETLIKSFEHLIRKIQKS 142
>gi|77409736|ref|ZP_00786395.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
gi|77171650|gb|EAO74860.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
Length = 109
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RN ++R+++ L ++ +D+V+IA++ + ++ L +
Sbjct: 41 RVGISVSKKLGNAVVRNAVKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKN 98
Query: 102 FV 103
+
Sbjct: 99 LI 100
>gi|332365177|gb|EGJ42940.1| ribonuclease P protein component [Streptococcus sanguinis SK1059]
Length = 119
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ K+G+ F + +L + RVG +V+KK G AV RNR++R+++ + +
Sbjct: 15 AIFKRGQSFANRKFVVYMLEKEQKHF--RVGISVSKKLGNAVVRNRIKRKIRHVLMQYQK 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+++ D+V+IA++ +EL H VE+
Sbjct: 73 QLVQ--ADFVVIARKGV-----EELDYHQVEQ 97
>gi|283782564|ref|YP_003373318.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|297243218|ref|ZP_06927153.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
gi|283441622|gb|ADB14088.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|296888752|gb|EFH27489.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
Length = 135
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
FS L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL A
Sbjct: 34 FSGTFLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLR-VIAKNYESLLPAGCDVVLRA 92
Query: 87 KRDALFIPFKEL 98
K A F L
Sbjct: 93 KPSAAQSSFDSL 104
>gi|25010516|ref|NP_734911.1| ribonuclease P [Streptococcus agalactiae NEM316]
gi|29427743|sp|Q8E6W5|RNPA_STRA3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23094869|emb|CAD46087.1| Unknown [Streptococcus agalactiae NEM316]
Length = 109
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
RVG +V+KK G AV RN ++R+++ L ++ +D+V+IA++
Sbjct: 41 RVGISVSKKLGNAVVRNAIKRKIRHV--LLSQKTALQDYDFVVIARK 85
>gi|329315433|gb|AEB89846.1| Ribonuclease P protein component [Staphylococcus aureus subsp.
aureus T0131]
Length = 115
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R+G +V+KK G AV RN+++R ++E ++ +L D +LIA++ A
Sbjct: 42 RLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHIL--AKDIILIARQPA 88
>gi|329297779|ref|ZP_08255115.1| ribonuclease P [Plautia stali symbiont]
Length = 119
Score = 34.7 bits (78), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
F V + LR G + +L NS PR+G T+ KK A ERNR++R +E+ RL
Sbjct: 17 HFTFVFQQPLRAG-TPQITILGRLNSLGHPRIGLTIAKKHVKRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 76 RQHELPP--MDFVIVAKK 91
>gi|219670953|ref|YP_002461388.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
gi|219541213|gb|ACL22952.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
Length = 111
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRL-CAEGVLKHGHDYVLIAKRDALFIPFKELC 99
R GF +KK G AV RNR +R ++E +RL AE +K + IA+ + + ++
Sbjct: 38 SRFGFIASKKVGNAVVRNRAKRLMREVIRLHLAE--MKENTQIICIARSSIKGVSYSQVE 95
Query: 100 NHFVERVRRNK 110
N ++ + + K
Sbjct: 96 NSLLKSLYKAK 106
>gi|192360289|ref|YP_001984276.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
gi|190686454|gb|ACE84132.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
Length = 135
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L+ N PR+G + KK AV+RNR++R ++E RL + + G D ++++++
Sbjct: 35 ILSRPNQLPHPRLGLVIAKKHVSLAVQRNRIKRLVREQFRLQQQEL--AGLDVIVLSRKG 92
Query: 90 ALFIPFKELCNHFVERVRR 108
+ E F ++++R
Sbjct: 93 VADLENAEFVAQFRQQLQR 111
>gi|313230514|emb|CBY18730.1| unnamed protein product [Oikopleura dioica]
Length = 4775
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
GPFFS+ V +NS + P + FT+ V E V + HD V
Sbjct: 94 GPFFSVTVPEESNSKIAPGMSFTIF-------------------VNFSPEVVKDYDHDLV 134
Query: 84 LIAKRDALFIPFK 96
+++R+ IP K
Sbjct: 135 CVSERERTVIPIK 147
>gi|326804335|ref|YP_004322153.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651500|gb|AEA01683.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
Length = 128
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
RVG +V KK G AV RNR++R +++A+ + +K D+++IA++ P K++
Sbjct: 41 RVGLSVGKKIGNAVTRNRVKRLIRQALTEL-KPYIKSNVDFIIIARK-----PTKDMTQ 93
>gi|170289144|ref|YP_001739382.1| ribonuclease P protein component [Thermotoga sp. RQ2]
gi|238688852|sp|B1LBK1|RNPA_THESQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|170176647|gb|ACB09699.1| ribonuclease P protein component [Thermotoga sp. RQ2]
Length = 117
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ K+GE + +F VL N R+G V +K G A RN+++R ++E R +G
Sbjct: 20 IFKEGESLQNEYFV--VLFRKNGLDYSRLGIVVKRKFGKATRRNKLKRWVREIFR-RNKG 76
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+ G D V+ IP K+L F ERV
Sbjct: 77 VIPKGFDIVV--------IPRKKLSEEF-ERV 99
>gi|154249721|ref|YP_001410546.1| ribonuclease P protein component [Fervidobacterium nodosum
Rt17-B1]
gi|154153657|gb|ABS60889.1| ribonuclease P protein component [Fervidobacterium nodosum
Rt17-B1]
Length = 129
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK RR L+ K+G+ + +F ++ N R+ +V KK G A RN++RR ++
Sbjct: 18 LKLRRDITLLFKEGKSVQNEYFV--IIYRKNGLDYSRIAISVKKKFGKANRRNKLRRWVR 75
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD 89
E R + K G D+++IA+++
Sbjct: 76 ECFRTNKYNISK-GFDFLIIARKN 98
>gi|154503052|ref|ZP_02040112.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
gi|153796293|gb|EDN78713.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
Length = 111
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V K G+ + L + N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNKDFQVVYKNGKSYANRYLVLYIRENGMDK--NRLGISVSKKVGNSVVRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
E+ RL E + G D V+IA+ A KE H +E
Sbjct: 65 ESYRLQEEH-FQCGFDLVVIARAGA-----KERSYHDIE 97
>gi|148266441|ref|YP_001233147.1| ribonuclease P [Geobacter uraniireducens Rf4]
gi|226736870|sp|A5G9V6|RNPA_GEOUR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146399941|gb|ABQ28574.1| ribonuclease P protein component [Geobacter uraniireducens Rf4]
Length = 113
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLC-AEGVLKHGHDYVLI 85
F L + +S L ++G TV++K G +V RNR++R ++E RL + V+ H Y +I
Sbjct: 33 FILLWTHTEDSTL--KIGITVSRKVGNSVIRNRVKRLVREFYRLNKSRFVMAH---YNII 87
Query: 86 AKRDALFIPFKELC 99
AK+ A + F+ L
Sbjct: 88 AKKGAEQLDFQRLS 101
>gi|227550638|ref|ZP_03980687.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257888097|ref|ZP_05667750.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257896285|ref|ZP_05675938.1| ribonuclease P [Enterococcus faecium Com12]
gi|257899269|ref|ZP_05678922.1| ribonuclease P [Enterococcus faecium Com15]
gi|293379366|ref|ZP_06625510.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
gi|293572716|ref|ZP_06683680.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|227180239|gb|EEI61211.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257824151|gb|EEV51083.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257832850|gb|EEV59271.1| ribonuclease P [Enterococcus faecium Com12]
gi|257837181|gb|EEV62255.1| ribonuclease P [Enterococcus faecium Com15]
gi|291607208|gb|EFF36566.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|292641889|gb|EFF60055.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
Length = 118
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++R+++ AV E + D+++IA+ + + E+ ++
Sbjct: 42 RVGLSVGKKVGNAVSRNEVKRKIRAAVYSIKEEIDPE-LDFIVIARPSVKGLTYDEVRSN 100
Query: 102 FV 103
V
Sbjct: 101 LV 102
>gi|103491962|gb|ABF71982.1| ribonuclease P protein component [Persephonella marina]
Length = 117
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
V+ NN PR F +++K AV RNR +R +KEA+R + +D + IAK++
Sbjct: 26 VIYRNNDLGYPRFAFILSRKFSKKAVVRNRAKRIIKEALRAYYGSLKNLSYDIIFIAKKN 85
Query: 90 AL 91
+
Sbjct: 86 II 87
>gi|323493775|ref|ZP_08098893.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
gi|323311909|gb|EGA65055.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
Length = 118
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ N+ S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARKNSLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQLA--NKDF 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|194467401|ref|ZP_03073388.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
gi|194454437|gb|EDX43334.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
Length = 117
Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++RR+++ + L + L+ D+++IA+ A + E +
Sbjct: 42 RVGISVGKKIGNAVHRNWVKRRIRQTL-LEVKPQLRSDVDFLVIARSAADGLSMAETKKN 100
Query: 102 FVERVRR 108
V ++R
Sbjct: 101 LVHVLKR 107
>gi|167755167|ref|ZP_02427294.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|237733409|ref|ZP_04563890.1| ribonuclease P protein component [Mollicutes bacterium D7]
gi|167705217|gb|EDS19796.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|229383444|gb|EEO33535.1| ribonuclease P protein component [Coprobacillus sp. D7]
Length = 112
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL--KHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G AV RN+++R+ VR+ + + +DY++I + L + F
Sbjct: 40 ARIGISVSKKLGKAVIRNKIKRQ----VRMMLQQTINFDDNYDYIVIIRNKYLDLDFNSN 95
Query: 99 CNHF 102
N
Sbjct: 96 LNEL 99
>gi|327472486|gb|EGF17917.1| ribonuclease P protein component [Streptococcus sanguinis SK408]
Length = 119
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ K+G+ F + +L + RVG +V+KK G AV RNR++R+++ + +
Sbjct: 15 AIFKRGQSFANRKFVVYMLEKEQKHF--RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQK 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+++ D+V+IA++ +EL H VE+
Sbjct: 73 QLVQ--ADFVVIARKGV-----EELDYHQVEQ 97
>gi|324989806|gb|EGC21749.1| ribonuclease P protein component [Streptococcus sanguinis SK353]
Length = 119
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A+ K+G+ F + +L + RVG +V+KK G AV RNR++R+++ + +
Sbjct: 15 AIFKRGQSFANRKFVVYMLEKEQKHF--RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQK 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+++ D+V+IA++ +EL H VE+
Sbjct: 73 HLVQ--ADFVVIARKGV-----EELDYHQVEQ 97
>gi|317496614|ref|ZP_07954961.1| ribonuclease P [Gemella moribillum M424]
gi|316913279|gb|EFV34778.1| ribonuclease P [Gemella moribillum M424]
Length = 116
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G A ERN+++R ++E + + +D ++IA+ +PF E+
Sbjct: 41 RLGISVSKKLGKAHERNKIKRYIRETFKTRKNHI--KNYDIIIIARAGVKELPFLEV 95
>gi|332654816|ref|ZP_08420558.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
gi|332516159|gb|EGJ45767.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
Length = 121
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK+ +F L KG P+F++ N + R+G T K G AV+RNR
Sbjct: 1 MKHTIALKQNHEFRRLYNKGRSAVSPYFAIYCRKTNRP--ISRLGITTGVKLGNAVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RRR++E R E L G+D V++A+ ++ +++L F++ +R+
Sbjct: 59 ARRRIRELYR-TNEARLAPGYDIVVVARTRVIYGRYRDLERSFLQLMRK 106
>gi|156936083|ref|YP_001439999.1| ribonuclease P [Cronobacter sakazakii ATCC BAA-894]
gi|166226718|sp|A7MN01|RNPA_ENTS8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156534337|gb|ABU79163.1| hypothetical protein ESA_03977 [Cronobacter sakazakii ATCC BAA-894]
Length = 119
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+ +L NS PR+G TV KK A ERNR++R +E+ RL + D+V++A
Sbjct: 32 QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRLRQHELPP--MDFVVVA 89
Query: 87 KRDALFIPFKELCNHFVERVRRN 109
KR + +EL + RR+
Sbjct: 90 KRGIADLDNRELSEALEKLWRRH 112
>gi|327482913|gb|AEA86223.1| ribonuclease P [Pseudomonas stutzeri DSM 4166]
Length = 104
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
PR+G + KK +VERNR++R+++E R + G D V+IA++ + EL
Sbjct: 18 PRLGLVIGKKSVKLSVERNRIKRQIRETFR--HHQLELAGWDIVIIARKGLADLDNPELA 75
Query: 100 NHFVERVRRNKRS 112
F + +R R+
Sbjct: 76 KQFAKLWKRLSRN 88
>gi|295115470|emb|CBL36317.1| ribonuclease P protein component [butyrate-producing bacterium
SM4/1]
Length = 119
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+G +V+KK G +V R+ + R L+E+ RL + ++K G D V++A+ A F+++ +
Sbjct: 41 TRIGISVSKKVGNSVVRHHITRLLRESYRLN-KPMVKAGLDIVVVARAAAKESNFRQIES 99
Query: 101 HFV 103
++
Sbjct: 100 AYL 102
>gi|284049401|ref|YP_003399740.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
gi|283953622|gb|ADB48425.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
Length = 112
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
R G F+ L N N +G V K+ G AV RN+++RR++E R + LK H
Sbjct: 28 RYGVFYVLPSANGQNQ-----LGTAVGKRLGHAVLRNQVKRRMREVFR-KEQARLKGKHA 81
Query: 82 YVLIAKRDALFIPF 95
V +A+ P+
Sbjct: 82 IVWVARHRLAHAPY 95
>gi|257878644|ref|ZP_05658297.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257881310|ref|ZP_05660963.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257885585|ref|ZP_05665238.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257890527|ref|ZP_05670180.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257893102|ref|ZP_05672755.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|258615272|ref|ZP_05713042.1| ribonuclease P [Enterococcus faecium DO]
gi|260558225|ref|ZP_05830421.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|261206915|ref|ZP_05921604.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289566508|ref|ZP_06446932.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|293553545|ref|ZP_06674172.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|293563249|ref|ZP_06677701.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|293569161|ref|ZP_06680467.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|294616661|ref|ZP_06696432.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|294619743|ref|ZP_06699148.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|294623757|ref|ZP_06702585.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|314940133|ref|ZP_07847313.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|314943036|ref|ZP_07849840.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|314948154|ref|ZP_07851550.1| ribonuclease P protein component [Enterococcus faecium TX0082]
gi|314953432|ref|ZP_07856350.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|314993829|ref|ZP_07859165.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|314998146|ref|ZP_07863028.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|257812872|gb|EEV41630.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257816968|gb|EEV44296.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257821441|gb|EEV48571.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257826887|gb|EEV53513.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257829481|gb|EEV56088.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|260075399|gb|EEW63705.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|260078543|gb|EEW66245.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289161717|gb|EFD09593.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|291588130|gb|EFF19972.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|291590481|gb|EFF22219.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|291594013|gb|EFF25482.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|291596711|gb|EFF27934.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|291602300|gb|EFF32525.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|291604788|gb|EFF34270.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|313587858|gb|EFR66703.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|313591720|gb|EFR70565.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|313594535|gb|EFR73380.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|313598236|gb|EFR77081.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|313640638|gb|EFS05218.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|313645408|gb|EFS09988.1| ribonuclease P protein component [Enterococcus faecium TX0082]
Length = 118
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V KK G AV RN ++R+++ AV E + D+++IA+ + + E+ ++
Sbjct: 42 RVGLSVGKKVGNAVNRNEVKRKIRAAVYSIKEEIDPE-LDFIVIARPSVKGLTYDEVRSN 100
Query: 102 FV 103
V
Sbjct: 101 LV 102
>gi|292669290|ref|ZP_06602716.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
gi|292649131|gb|EFF67103.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
Length = 130
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
I+K+R F V + G + G L VL + + +VGF KK GCA R+R +R L
Sbjct: 13 IIKRRSDFQNVYQNGAVVPGRGMILYVLRD--PRVAGKVGFAAGKKLGCAAVRSRTKRLL 70
Query: 65 KEAVR 69
+EA R
Sbjct: 71 REAYR 75
>gi|281412768|ref|YP_003346847.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
gi|281373871|gb|ADA67433.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
Length = 117
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ K+GE + +F VL N R+G V +K G A RN+++R ++E R +G
Sbjct: 20 IFKEGESLQNEYFV--VLFRKNGLDYSRLGIVVKRKFGKATRRNKLKRWVREIFR-RNKG 76
Query: 75 VLKHGHDYVLIAKR 88
V+ G D V+I ++
Sbjct: 77 VIPKGFDIVVIPRK 90
>gi|153007345|ref|YP_001381670.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
gi|152030918|gb|ABS28686.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
Length = 170
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
VL ++ PR+G TV+ K AVERNR++R ++E R
Sbjct: 88 VLALDSRGTRPRIGITVSSKIANAVERNRVKRWVREEFR 126
>gi|325688909|gb|EGD30917.1| ribonuclease P protein component [Streptococcus sanguinis SK115]
gi|325695447|gb|EGD37347.1| ribonuclease P protein component [Streptococcus sanguinis SK150]
gi|332358081|gb|EGJ35913.1| ribonuclease P protein component [Streptococcus sanguinis SK49]
Length = 119
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +EL H
Sbjct: 41 RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKQLVQ--ADFVVIARKGV-----EELDYH 93
Query: 102 FVER 105
VE+
Sbjct: 94 QVEQ 97
>gi|153877060|ref|ZP_02004059.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
gi|152066476|gb|EDN65941.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
Length = 129
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L VL N+ + R+G +TKK+ AV+RNR++R ++E+ R ++ G D V++AK
Sbjct: 34 LTVLARLNAQDVARLGLAITKKRAKLAVDRNRIKRLIRESFRHHQSDLV--GLDCVVLAK 91
>gi|323694898|ref|ZP_08109048.1| ribonuclease P [Clostridium symbiosum WAL-14673]
gi|323500988|gb|EGB16900.1| ribonuclease P [Clostridium symbiosum WAL-14673]
Length = 89
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G +V R+ + R ++E+ RL + V K G D V++A+ A FK++
Sbjct: 11 TRIGISVSKKVGNSVVRHHITRLVRESYRLNKDRV-KTGLDIVVVARAAAKESDFKKI 67
>gi|319946178|ref|ZP_08020418.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
gi|319747560|gb|EFV99813.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
Length = 113
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R ++ + + ++ D+V+IA++ + F ++ +
Sbjct: 41 RVGLSVSKKLGNAVTRNRIKRLIRHVLMKHQDHLV--ADDFVVIARKGVEELDFDQVEKN 98
Query: 102 FV 103
V
Sbjct: 99 LV 100
>gi|307133249|ref|YP_003885265.1| protein C5 component of RNase P [Dickeya dadantii 3937]
gi|306530778|gb|ADN00709.1| protein C5 component of RNase P [Dickeya dadantii 3937]
Length = 119
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRL 70
F+ V + R G + +L N+ PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 HFSFVFQQPQRAG-TPQITILGRPNTLGHPRIGLTVAKKHVRRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V+IAK+
Sbjct: 76 HQHELP--AMDFVVIAKK 91
>gi|297627572|ref|YP_003689335.1| ribonuclease P protein component (RNaseP protein) (RNase P
protein) (Protein C5) [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296923337|emb|CBL57938.1| Ribonuclease P protein component (RNaseP protein) (RNase P
protein) (Protein C5) [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 142
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+VGF V+KK G AV RNR++RRL+ R
Sbjct: 51 KVGFVVSKKVGNAVTRNRVKRRLRHMAR 78
>gi|239637284|ref|ZP_04678271.1| ribonuclease P protein component [Staphylococcus warneri L37603]
gi|239597121|gb|EEQ79631.1| ribonuclease P protein component [Staphylococcus warneri L37603]
Length = 115
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
R+G +V+KK G AV RN+++R ++E ++ + ++ D ++IA++ A
Sbjct: 42 RLGISVSKKLGNAVTRNKIKRAIRENFKVHKQDII--TKDIIVIARQPA 88
>gi|85060409|ref|YP_456111.1| ribonuclease P [Sodalis glossinidius str. 'morsitans']
gi|123518606|sp|Q2NQ69|RNPA_SODGM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84780929|dbj|BAE75706.1| ribonuclease P protein [Sodalis glossinidius str. 'morsitans']
Length = 119
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PRVG TV KK A ERNR++R +E+ RL + D+V+IAK
Sbjct: 33 VTILGRLNTLGHPRVGLTVAKKHVKRAHERNRIKRLTRESFRLHQHALPT--MDFVVIAK 90
Query: 88 R 88
+
Sbjct: 91 K 91
>gi|323357958|ref|YP_004224354.1| RNase P protein component [Microbacterium testaceum StLB037]
gi|323274329|dbj|BAJ74474.1| RNase P protein component [Microbacterium testaceum StLB037]
Length = 112
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
A V++G R ++ + + + R GF V+K+ G AV RN +RRRLK +CAE
Sbjct: 16 ATVRRGS-RCAGTHAVTYVGGVDEDGPARFGFIVSKQVGSAVTRNTVRRRLKA---VCAE 71
Query: 74 GV--LKHGHDYVL 84
+ ++ G V+
Sbjct: 72 ALPSVRGGASVVI 84
>gi|303250322|ref|ZP_07336521.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650792|gb|EFL80949.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 109
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 22 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 79
>gi|303251715|ref|ZP_07337886.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649145|gb|EFL79330.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 109
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 22 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 79
>gi|152993158|ref|YP_001358879.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
gi|151425019|dbj|BAF72522.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
Length = 96
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLK----EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+VGF +KK G AV RNR +R L+ E + L G YVL+AK L F E
Sbjct: 25 KVGFVASKKIGNAVHRNRAKRLLRAHFIENIDLLKSG------SYVLVAKPALLSKSFSE 78
>gi|39938734|ref|NP_950500.1| ribonuclease P [Onion yellows phytoplasma OY-M]
gi|60390478|sp|Q6YQX5|RNPA_ONYPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|39721843|dbj|BAD04333.1| ribonuclease P [Onion yellows phytoplasma OY-M]
Length = 141
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGF--TVTKKQGCAVERNRMRRR 63
ILKK + V K + R G SL ++ P F +V KK G A ERN ++RR
Sbjct: 32 ILKKESEITPVFKSKKRYGN--SLFIIYYVKQTAFPHFKFALSVGKKYGKAHERNLIKRR 89
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
L+ +R L +V++ K A + F++L F++
Sbjct: 90 LRAIIR-SVSPCLNPKMFFVIVIKAQAKNLTFQQLKTFFLQ 129
>gi|190151296|ref|YP_001969821.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189916427|gb|ACE62679.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 110
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 22 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 79
>gi|165977384|ref|YP_001652977.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877485|gb|ABY70533.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 110
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 22 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 79
>gi|187251670|ref|YP_001876152.1| ribonuclease P protein component [Elusimicrobium minutum Pei191]
gi|186971830|gb|ACC98815.1| Ribonuclease P protein component [Elusimicrobium minutum Pei191]
Length = 127
Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
N + LP++ V++K G A RNR +R L+E RL + HG +++ + I
Sbjct: 45 NLGDDKLPKMAIAVSRKLGHAPLRNRTKRLLREVFRLNKYKI-NHGVAFIISPRESGNLI 103
Query: 94 PFKELC 99
F C
Sbjct: 104 NFHTTC 109
>gi|332702556|ref|ZP_08422644.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
gi|332552705|gb|EGJ49749.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
Length = 137
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R+G VT+K G AV RNR++R L+E RL + L D V++ KR
Sbjct: 46 RLGLAVTRKVGSAVRRNRIKRVLREYFRL-HQHELSELMDIVVVPKR 91
>gi|323350583|ref|ZP_08086245.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|322123265|gb|EFX94950.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|324992540|gb|EGC24461.1| ribonuclease P protein component [Streptococcus sanguinis SK405]
gi|324995931|gb|EGC27842.1| ribonuclease P protein component [Streptococcus sanguinis SK678]
gi|327460764|gb|EGF07099.1| ribonuclease P protein component [Streptococcus sanguinis SK1]
gi|327488847|gb|EGF20646.1| ribonuclease P protein component [Streptococcus sanguinis SK1058]
gi|332360027|gb|EGJ37841.1| ribonuclease P protein component [Streptococcus sanguinis SK1056]
Length = 119
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +EL H
Sbjct: 41 RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKHLVQ--ADFVVIARKGV-----EELDYH 93
Query: 102 FVER 105
VE+
Sbjct: 94 QVEQ 97
>gi|328944627|gb|EGG38788.1| ribonuclease P protein component [Streptococcus sanguinis SK1087]
Length = 119
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +EL H
Sbjct: 41 RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKKLVQ--ADFVVIARKGV-----EELDYH 93
Query: 102 FVER 105
VE+
Sbjct: 94 QVEQ 97
>gi|325697376|gb|EGD39262.1| ribonuclease P protein component [Streptococcus sanguinis SK160]
Length = 119
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +EL H
Sbjct: 41 RVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKQLVQ--ADFVVIARKGV-----EELDYH 93
Query: 102 FVER 105
VE+
Sbjct: 94 QVEQ 97
>gi|146313781|ref|YP_001178855.1| ribonuclease P protein component [Enterobacter sp. 638]
gi|145320657|gb|ABP62804.1| ribonuclease P protein component [Enterobacter sp. 638]
Length = 108
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L NS PR+G TV KK A ERNR++R +E+ RL + D+V++AK
Sbjct: 22 ITILGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRLRQHELP--SMDFVVVAK 79
Query: 88 R 88
+
Sbjct: 80 K 80
>gi|294101693|ref|YP_003553551.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
gi|293616673|gb|ADE56827.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
Length = 123
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVR 69
R+G V K+QG A RNR RR LKE++R
Sbjct: 37 RIGLAVGKRQGSACVRNRGRRILKESIR 64
>gi|332296675|ref|YP_004438597.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
gi|332179778|gb|AEE15466.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
Length = 120
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
NN + N R+ FT+ + G AVERNR +R +EA R + L G+D + +
Sbjct: 45 NNTDKN---RIAFTLPRGYGNAVERNRSKRVSREAYRYF-KAFLNTGYDMIFL 93
>gi|302336555|ref|YP_003801761.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
gi|301633740|gb|ADK79167.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
Length = 115
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
NN N R T+ +K G AV+RNR +R +EA RL + + G+D VL+ R
Sbjct: 29 NNTERN---RFTVTLVRKYGNAVQRNRAKRVAREAYRLIKPEI-RQGYDMVLLLYR 80
>gi|5824154|emb|CAB54061.1| hypothetical protein, 54.5 kD [Pseudomonas putida]
Length = 483
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAV--ERNRMR 61
+ +++ +A V + G ++L+ LN N L R+G TV+K +G + R+
Sbjct: 338 LATVERHHPYAFVSYEDSVAGQPYTLQALNGNYKRALARIGQTVSKPEGRSTHGHRHAFG 397
Query: 62 RRLKEA 67
RRL++A
Sbjct: 398 RRLRKA 403
>gi|307258044|ref|ZP_07539796.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863407|gb|EFM95338.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 100
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
>gi|307249015|ref|ZP_07531023.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854473|gb|EFM86668.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 100
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
>gi|313894728|ref|ZP_07828289.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976637|gb|EFR42091.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
Length = 130
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S ++K+R F V KG G + L +L + + + +VGF KK G A R+R
Sbjct: 8 LSRAQMIKRRSDFQNVYHKGTAFPGRYIILYILRD--ARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLC 71
+R ++EA RL
Sbjct: 66 TKRLMREAYRLM 77
>gi|32034083|ref|ZP_00134327.1| COG0594: RNase P protein component [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209397|ref|YP_001054622.1| ribonuclease P [Actinobacillus pleuropneumoniae L20]
gi|307246877|ref|ZP_07528942.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251212|ref|ZP_07533133.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253631|ref|ZP_07535498.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255859|ref|ZP_07537660.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260312|ref|ZP_07542019.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262441|ref|ZP_07544086.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126098189|gb|ABN75017.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|306852162|gb|EFM84402.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856728|gb|EFM88863.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858867|gb|EFM90913.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861127|gb|EFM93120.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865563|gb|EFM97444.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306867818|gb|EFM99649.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 100
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
>gi|307264649|ref|ZP_07546229.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306869961|gb|EFN01725.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 101
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
>gi|229816223|ref|ZP_04446533.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
gi|229808231|gb|EEP44023.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
Length = 120
Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
P + + + + RV F K+ G AV RNR +R L+EA R C V G + +L
Sbjct: 23 PLIRMVICDCVSEGDPARVAFAAAKRLGNAVVRNRSKRVLREAARACCLPV--EGREIIL 80
Query: 85 IA 86
A
Sbjct: 81 FA 82
>gi|329769248|ref|ZP_08260666.1| ribonuclease P [Gemella sanguinis M325]
gi|328839339|gb|EGF88920.1| ribonuclease P [Gemella sanguinis M325]
Length = 114
Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI---AKRDALFIPFKEL 98
R+G +V+KK G A ERNR++R ++E+ + + LK+ +D ++I A + F+ F
Sbjct: 41 RLGISVSKKLGKAHERNRLKRYVRESFK-TRKDFLKN-YDIIIIVRPAAKGLSFLEFGSS 98
Query: 99 CNHFVER 105
+H ++R
Sbjct: 99 IDHVLKR 105
>gi|323496922|ref|ZP_08101950.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
gi|323317996|gb|EGA70979.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
Length = 118
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ N+ S+ PR+G V KKQ AV RNR +R +E+ R + D+
Sbjct: 30 SPHFTIIARKNSLSH--PRLGLAVPKKQIKTAVGRNRFKRLARESFRNKQHQLP--NKDF 85
Query: 83 VLIAKRDA 90
V+IAK+ A
Sbjct: 86 VVIAKKSA 93
>gi|197294710|ref|YP_001799251.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
gi|226736871|sp|B1VAN7|RNPA_PHYAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171854037|emb|CAM12010.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
Length = 115
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
ILKK + V + + R G + + N N + +V KK G A ERN ++RRL+
Sbjct: 6 ILKKESEITAVFRSKKRCGNSSFIIYYSKQNVNTYFKFALSVGKKYGKAHERNLIKRRLR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+R + L +V++ K A + F++L F +
Sbjct: 66 AIIRNYSSN-LNPAFFFVIVIKPPAKNLTFQQLKTTFAK 103
>gi|254561548|ref|YP_003068643.1| ribonuclease P protein component [Methylobacterium extorquens DM4]
gi|254268826|emb|CAX24787.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens DM4]
Length = 165
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+GFT+TK+ G A ERNR+RRRL+ AV A G D V+IA+R AL PF L
Sbjct: 50 LGFTITKRVGHATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLV 106
>gi|283797191|ref|ZP_06346344.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|291075150|gb|EFE12514.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|295090274|emb|CBK76381.1| ribonuclease P protein component [Clostridium cf. saccharolyticum
K10]
Length = 119
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G +V+KK G +V R+ + R L+E+ RL + ++K G D V++A+ A F+++
Sbjct: 41 TRIGISVSKKVGNSVVRHHITRLLRESYRLN-KPMVKAGLDIVVVARAAAKESNFRQI 97
>gi|254384776|ref|ZP_05000113.1| ribonuclease P protein component [Streptomyces sp. Mg1]
gi|194343658|gb|EDX24624.1| ribonuclease P protein component [Streptomyces sp. Mg1]
Length = 124
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVR 69
R GF V+K G AV RNR++RRL+ VR
Sbjct: 52 RAGFVVSKAVGIAVVRNRVKRRLRHLVR 79
>gi|254362248|ref|ZP_04978362.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261492908|ref|ZP_05989454.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496742|ref|ZP_05993117.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093823|gb|EDN74758.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261307581|gb|EEY08909.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311449|gb|EEY12606.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 124
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 12 QFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
QF V + LR P +L NN N PR+G TV KK A +RNR++R ++E+ R
Sbjct: 17 QFKAVFEEPLRASTPQMTLLARENNLEN--PRLGLTVAKKHLKRAHDRNRIKRIVRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAK 87
L + D+V +AK
Sbjct: 75 LKQHEL--PNFDFVFVAK 90
>gi|26250445|ref|NP_756485.1| ribonuclease P [Escherichia coli CFT073]
gi|29427783|sp|Q8FBV5|RNPA_ECOL6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|26110875|gb|AAN83059.1|AE016769_174 Ribonuclease P protein component [Escherichia coli CFT073]
Length = 119
Score = 33.9 bits (76), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRL 70
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFTFVFQQPQRAG-TPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 76 RQHEL--PAMDFVVVAKK 91
>gi|261868620|ref|YP_003256542.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293391844|ref|ZP_06636178.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261413952|gb|ACX83323.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290952378|gb|EFE02497.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 111
Score = 33.9 bits (76), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G TV KK A +RNR++R +E+ RL + +D+V++AK
Sbjct: 22 ITILARQNHLEHPRLGLTVAKKHLKRAHDRNRIKRLCRESFRLAQHDLP--NYDFVIVAK 79
Query: 88 R 88
+
Sbjct: 80 Q 80
>gi|118620078|ref|YP_908410.1| ribonuclease P [Mycobacterium ulcerans Agy99]
gi|183985457|ref|YP_001853748.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
gi|166226726|sp|A0PX70|RNPA_MYCUA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690944|sp|B2HNT8|RNPA_MYCMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118572188|gb|ABL06939.1| ribonuclease P protein component RnpA [Mycobacterium ulcerans
Agy99]
gi|183178783|gb|ACC43893.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
Length = 120
Score = 33.9 bits (76), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
PRVG + K G AVER+R+ RRL+ R
Sbjct: 45 PRVGLIIAKSVGTAVERHRVARRLRHVAR 73
>gi|16131572|ref|NP_418159.1| protein C5 component of RNase P [Escherichia coli str. K-12
substr. MG1655]
gi|24114986|ref|NP_709496.1| ribonuclease P [Shigella flexneri 2a str. 301]
gi|30065012|ref|NP_839183.1| ribonuclease P [Shigella flexneri 2a str. 2457T]
gi|74314018|ref|YP_312437.1| ribonuclease P [Shigella sonnei Ss046]
gi|82546032|ref|YP_409979.1| ribonuclease P [Shigella boydii Sb227]
gi|82779233|ref|YP_405582.1| ribonuclease P [Shigella dysenteriae Sd197]
gi|89110309|ref|AP_004089.1| protein C5 component of RNase P [Escherichia coli str. K-12
substr. W3110]
gi|91213227|ref|YP_543213.1| ribonuclease P [Escherichia coli UTI89]
gi|117625979|ref|YP_859302.1| ribonuclease P [Escherichia coli APEC O1]
gi|157156562|ref|YP_001465189.1| ribonuclease P [Escherichia coli E24377A]
gi|157163184|ref|YP_001460502.1| ribonuclease P [Escherichia coli HS]
gi|170083205|ref|YP_001732525.1| protein C5 component of RNase P [Escherichia coli str. K-12
substr. DH10B]
gi|170679855|ref|YP_001746034.1| ribonuclease P [Escherichia coli SMS-3-5]
gi|170766655|ref|ZP_02901108.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|187731058|ref|YP_001882462.1| ribonuclease P [Shigella boydii CDC 3083-94]
gi|188492336|ref|ZP_02999606.1| ribonuclease P protein component [Escherichia coli 53638]
gi|191165811|ref|ZP_03027649.1| ribonuclease P protein component [Escherichia coli B7A]
gi|191170299|ref|ZP_03031852.1| ribonuclease P protein component [Escherichia coli F11]
gi|193063844|ref|ZP_03044931.1| ribonuclease P protein component [Escherichia coli E22]
gi|193069131|ref|ZP_03050088.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194428119|ref|ZP_03060663.1| ribonuclease P protein component [Escherichia coli B171]
gi|194435905|ref|ZP_03068008.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209921181|ref|YP_002295265.1| ribonuclease P [Escherichia coli SE11]
gi|215489044|ref|YP_002331475.1| ribonuclease P [Escherichia coli O127:H6 str. E2348/69]
gi|218551234|ref|YP_002385026.1| ribonuclease P [Escherichia fergusonii ATCC 35469]
gi|218556270|ref|YP_002389184.1| ribonuclease P [Escherichia coli IAI1]
gi|218560779|ref|YP_002393692.1| ribonuclease P [Escherichia coli S88]
gi|218691992|ref|YP_002400204.1| ribonuclease P [Escherichia coli ED1a]
gi|218697426|ref|YP_002405093.1| ribonuclease P [Escherichia coli 55989]
gi|218702553|ref|YP_002410182.1| ribonuclease P [Escherichia coli IAI39]
gi|218707350|ref|YP_002414869.1| ribonuclease P [Escherichia coli UMN026]
gi|237703506|ref|ZP_04533987.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238902794|ref|YP_002928590.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|254038923|ref|ZP_04872975.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|254163655|ref|YP_003046763.1| ribonuclease P [Escherichia coli B str. REL606]
gi|260846511|ref|YP_003224289.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|260857885|ref|YP_003231776.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|260870435|ref|YP_003236837.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|291285123|ref|YP_003501941.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|293407344|ref|ZP_06651266.1| rnpA [Escherichia coli FVEC1412]
gi|293413159|ref|ZP_06655825.1| ribonuclease P [Escherichia coli B354]
gi|293417176|ref|ZP_06659803.1| ribonuclease P [Escherichia coli B185]
gi|293464027|ref|ZP_06664441.1| ribonuclease P [Escherichia coli B088]
gi|298383085|ref|ZP_06992680.1| rnpA [Escherichia coli FVEC1302]
gi|309784246|ref|ZP_07678885.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|331644428|ref|ZP_08345557.1| ribonuclease P protein component [Escherichia coli H736]
gi|331649531|ref|ZP_08350617.1| ribonuclease P protein component [Escherichia coli M605]
gi|331655365|ref|ZP_08356364.1| ribonuclease P protein component [Escherichia coli M718]
gi|331660047|ref|ZP_08360985.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331665354|ref|ZP_08366255.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331670548|ref|ZP_08371387.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331675195|ref|ZP_08375948.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331679802|ref|ZP_08380472.1| ribonuclease P protein component [Escherichia coli H591]
gi|331685428|ref|ZP_08386014.1| ribonuclease P protein component [Escherichia coli H299]
gi|332282507|ref|ZP_08394920.1| ribonuclease P protein component [Shigella sp. D9]
gi|67472378|sp|P0A7Y8|RNPA_ECOLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67472379|sp|P0A7Y9|RNPA_SHIFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122421837|sp|Q1R4N2|RNPA_ECOUT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123558281|sp|Q31UV7|RNPA_SHIBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123561064|sp|Q329B4|RNPA_SHIDS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123615902|sp|Q3YWB0|RNPA_SHISS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226717|sp|A1AHN8|RNPA_ECOK1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991076|sp|A7ZTR0|RNPA_ECO24 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991077|sp|A8A6G5|RNPA_ECOHS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736863|sp|B7MGC5|RNPA_ECO45 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736864|sp|B7NR06|RNPA_ECO7I RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736865|sp|B7M556|RNPA_ECO8A RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736866|sp|B7NF21|RNPA_ECOLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736867|sp|B1LL31|RNPA_ECOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736868|sp|B7LK46|RNPA_ESCF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741388|sp|B6I3T7|RNPA_ECOSE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890166|sp|B1X9T2|RNPA_ECODH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691695|sp|B2TUS4|RNPA_SHIB3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808065|sp|B7UMH1|RNPA_ECO27 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808066|sp|B7L844|RNPA_ECO55 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808067|sp|B7N2E9|RNPA_ECO81 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494105|sp|C4ZYY1|RNPA_ECOBW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147683|gb|AAA24567.1| ribonuclease P protein component [Escherichia coli]
gi|290552|gb|AAA62055.1| RNase P, protein component [Escherichia coli]
gi|1790139|gb|AAC76727.1| protein C5 component of RNase P [Escherichia coli str. K-12
substr. MG1655]
gi|24054238|gb|AAN45203.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
301]
gi|30043273|gb|AAP18994.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
2457T]
gi|73857495|gb|AAZ90202.1| RNase P, protein component [Shigella sonnei Ss046]
gi|81243381|gb|ABB64091.1| RNase P, protein component [Shigella dysenteriae Sd197]
gi|81247443|gb|ABB68151.1| RnpA [Shigella boydii Sb227]
gi|85676340|dbj|BAE77590.1| protein C5 component of RNase P [Escherichia coli str. K12
substr. W3110]
gi|91074801|gb|ABE09682.1| ribonuclease P protein component [Escherichia coli UTI89]
gi|115515103|gb|ABJ03178.1| inner membrane protein translocase component YidC [Escherichia
coli APEC O1]
gi|157068864|gb|ABV08119.1| ribonuclease P protein component [Escherichia coli HS]
gi|157078592|gb|ABV18300.1| ribonuclease P protein component [Escherichia coli E24377A]
gi|169891040|gb|ACB04747.1| protein C5 component of RNase P [Escherichia coli str. K-12
substr. DH10B]
gi|170124093|gb|EDS93024.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|170517573|gb|ACB15751.1| ribonuclease P protein component [Escherichia coli SMS-3-5]
gi|187428050|gb|ACD07324.1| ribonuclease P protein component [Shigella boydii CDC 3083-94]
gi|188487535|gb|EDU62638.1| ribonuclease P protein component [Escherichia coli 53638]
gi|190904135|gb|EDV63846.1| ribonuclease P protein component [Escherichia coli B7A]
gi|190909107|gb|EDV68693.1| ribonuclease P protein component [Escherichia coli F11]
gi|192930559|gb|EDV83166.1| ribonuclease P protein component [Escherichia coli E22]
gi|192957455|gb|EDV87901.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194413877|gb|EDX30155.1| ribonuclease P protein component [Escherichia coli B171]
gi|194425448|gb|EDX41432.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209754088|gb|ACI75351.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754094|gb|ACI75354.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209914440|dbj|BAG79514.1| ribonuclease P protein component [Escherichia coli SE11]
gi|215267116|emb|CAS11563.1| protein C5 component of RNase P [Escherichia coli O127:H6 str.
E2348/69]
gi|218354158|emb|CAV00761.1| protein C5 component of RNase P [Escherichia coli 55989]
gi|218358776|emb|CAQ91434.1| protein C5 component of RNase P [Escherichia fergusonii ATCC
35469]
gi|218363039|emb|CAR00678.1| protein C5 component of RNase P [Escherichia coli IAI1]
gi|218367548|emb|CAR05333.1| protein C5 component of RNase P [Escherichia coli S88]
gi|218372539|emb|CAR20414.1| protein C5 component of RNase P [Escherichia coli IAI39]
gi|218429556|emb|CAR10520.2| protein C5 component of RNase P [Escherichia coli ED1a]
gi|218434447|emb|CAR15375.1| protein C5 component of RNase P [Escherichia coli UMN026]
gi|226838888|gb|EEH70915.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|226902770|gb|EEH89029.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238863295|gb|ACR65293.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|242379243|emb|CAQ34048.1| RNAse P protein component; processes tRNA, 4.5S RNA, subunit of
RNase P [Escherichia coli BL21(DE3)]
gi|253975556|gb|ACT41227.1| ribonuclease P [Escherichia coli B str. REL606]
gi|253979712|gb|ACT45382.1| ribonuclease P [Escherichia coli BL21(DE3)]
gi|257756534|dbj|BAI28036.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|257761658|dbj|BAI33155.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|257766791|dbj|BAI38286.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|281180759|dbj|BAI57089.1| ribonuclease P protein component [Escherichia coli SE15]
gi|281603070|gb|ADA76054.1| RNase P, protein component (Protein C5), processes tRNA, 45S RNA
[Shigella flexneri 2002017]
gi|284923787|emb|CBG36885.1| ribonuclease P protein component [Escherichia coli 042]
gi|290764996|gb|ADD58957.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|291321659|gb|EFE61095.1| ribonuclease P [Escherichia coli B088]
gi|291425635|gb|EFE98671.1| rnpA [Escherichia coli FVEC1412]
gi|291431207|gb|EFF04200.1| ribonuclease P [Escherichia coli B185]
gi|291468292|gb|EFF10787.1| ribonuclease P [Escherichia coli B354]
gi|294490598|gb|ADE89354.1| ribonuclease P protein component [Escherichia coli IHE3034]
gi|298276921|gb|EFI18439.1| rnpA [Escherichia coli FVEC1302]
gi|308927753|gb|EFP73221.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|309704151|emb|CBJ03498.1| ribonuclease P protein component [Escherichia coli ETEC H10407]
gi|315138288|dbj|BAJ45447.1| protein C5 component of RNase P [Escherichia coli DH1]
gi|323380929|gb|ADX53197.1| ribonuclease P protein component [Escherichia coli KO11]
gi|323934945|gb|EGB31323.1| ribonuclease P [Escherichia coli E1520]
gi|323939233|gb|EGB35446.1| ribonuclease P [Escherichia coli E482]
gi|323944176|gb|EGB40256.1| ribonuclease P [Escherichia coli H120]
gi|323949948|gb|EGB45832.1| ribonuclease P [Escherichia coli H252]
gi|323955001|gb|EGB50779.1| ribonuclease P [Escherichia coli H263]
gi|323959769|gb|EGB55419.1| ribonuclease P [Escherichia coli H489]
gi|323965765|gb|EGB61216.1| ribonuclease P [Escherichia coli M863]
gi|323971181|gb|EGB66427.1| ribonuclease P [Escherichia coli TA007]
gi|323975229|gb|EGB70333.1| ribonuclease P [Escherichia coli TW10509]
gi|324111601|gb|EGC05582.1| ribonuclease P [Escherichia fergusonii B253]
gi|324115944|gb|EGC09870.1| ribonuclease P [Escherichia coli E1167]
gi|331036722|gb|EGI08948.1| ribonuclease P protein component [Escherichia coli H736]
gi|331042029|gb|EGI14173.1| ribonuclease P protein component [Escherichia coli M605]
gi|331047380|gb|EGI19458.1| ribonuclease P protein component [Escherichia coli M718]
gi|331053262|gb|EGI25295.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331057864|gb|EGI29850.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331062610|gb|EGI34530.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331067640|gb|EGI39042.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331072974|gb|EGI44299.1| ribonuclease P protein component [Escherichia coli H591]
gi|331077799|gb|EGI49011.1| ribonuclease P protein component [Escherichia coli H299]
gi|332104859|gb|EGJ08205.1| ribonuclease P protein component [Shigella sp. D9]
gi|332764075|gb|EGJ94312.1| ribonuclease P protein component [Shigella flexneri 2930-71]
gi|224748|prf||1112173A RNase P
Length = 119
Score = 33.9 bits (76), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 76 RQHEL--PAMDFVVVAKK 91
>gi|240138940|ref|YP_002963415.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
gi|240008912|gb|ACS40138.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
Length = 165
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+GFT+TK+ G A ERNR+RRRL+ AV A G D V+IA+R AL PF L
Sbjct: 50 LGFTITKRVGHATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLV 106
>gi|163851775|ref|YP_001639818.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
gi|163663380|gb|ABY30747.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
Length = 165
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+GFT+TK+ G A ERNR+RRRL+ AV A G D V+IA+R AL PF L
Sbjct: 50 LGFTITKRVGHATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLV 106
>gi|33357536|pdb|1NZ0|A Chain A, Rnase P Protein From Thermotoga Maritima
gi|33357537|pdb|1NZ0|C Chain C, Rnase P Protein From Thermotoga Maritima
gi|33357538|pdb|1NZ0|B Chain B, Rnase P Protein From Thermotoga Maritima
gi|33357539|pdb|1NZ0|D Chain D, Rnase P Protein From Thermotoga Maritima
Length = 118
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
VL N R+G V +K G A RN+++R ++E R +GV+ G D V+
Sbjct: 35 VLFRKNGXDYSRLGIVVKRKFGKATRRNKLKRWVREIFR-RNKGVIPKGFDIVV------ 87
Query: 91 LFIPFKELCNHFVERV 106
IP K+L F ERV
Sbjct: 88 --IPRKKLSEEF-ERV 100
>gi|148826354|ref|YP_001291107.1| ribonuclease P [Haemophilus influenzae PittEE]
gi|148716514|gb|ABQ98724.1| ribonuclease P [Haemophilus influenzae PittEE]
Length = 194
Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +A
Sbjct: 32 EITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVA 89
Query: 87 K 87
K
Sbjct: 90 K 90
>gi|308234062|ref|ZP_07664799.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|328943459|ref|ZP_08240924.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|327491428|gb|EGF23202.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
Length = 105
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K ++ FA+V K G+ P + + + + RV + KK GCA RNR +R L+
Sbjct: 4 IKSKQDFAMVFKNGKRLFHPAVRIVFIPSTQTT---RVAYCAPKKIGCAPLRNRCKRLLR 60
Query: 66 EAVR 69
AVR
Sbjct: 61 AAVR 64
>gi|261338548|ref|ZP_05966432.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
gi|270276570|gb|EFA22424.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
Length = 89
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G V+K G AV RN ++RR + R E VL G D V+ AK A F+ L
Sbjct: 16 RLGLAVSKSVGNAVVRNAVKRRFRVLAR-TYEDVLPLGCDVVMRAKPSAAHASFQSL 71
>gi|220905231|ref|YP_002480543.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254808064|sp|B8J2U6|RNPA_DESDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219869530|gb|ACL49865.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 130
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
F + VL L R G V++K G AV RNR++R L+E RL E L D V +A
Sbjct: 33 FLVFVLPRACPGLRARTGMAVSRKVGKAVVRNRVKRLLREFYRLHREE-LPVEADIVTVA 91
Query: 87 KRDA 90
K+ A
Sbjct: 92 KKHA 95
>gi|92115432|ref|YP_575360.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
gi|122419004|sp|Q1QS97|RNPA_CHRSD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91798522|gb|ABE60661.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
Length = 128
Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L VL N+ PRVGF +KK AV+RNR++R ++E+ RL + + D +++A+
Sbjct: 34 LLVLARPNALGYPRVGFVFSKKNVRRAVDRNRLKRLVRESFRLQSHRL--PAVDIIVLAR 91
Query: 88 R--DAL 91
R DAL
Sbjct: 92 RGVDAL 97
>gi|297182641|gb|ADI18799.1| hypothetical protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 121
Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNN------NNSNLLPRVGFTVTKKQGCAVERNRM 60
LK+ +QF + K + +F++ N N+ N L + F + K G AV RN++
Sbjct: 7 LKQSKQFLRILKKKRLNTKYFTIYFEKNLSSAKKNDKNFL-NISFVIKKNIGNAVIRNKI 65
Query: 61 RRRLKEAVR--LCAEGVLKHGHDYVLIAK----RDALFIPFKELCNHF 102
+R+LK AV+ L + + + YV+ + +D + F E+ + F
Sbjct: 66 KRKLKSAVQKVLKEKQPVDLNYTYVIFGRNNVYKDKFRLIFDEVNDMF 113
>gi|188535564|ref|YP_001909361.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|292490138|ref|YP_003533033.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|292901142|ref|YP_003540511.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|238689718|sp|B2VCE5|RNPA_ERWT9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188030606|emb|CAO98501.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|291200990|emb|CBJ48129.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|291555580|emb|CBA24177.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|312174331|emb|CBX82584.1| RNase P, protein component [Erwinia amylovora ATCC BAA-2158]
Length = 119
Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+ +L N+ PR+G TV KK A ERNR++R +E+ RL + D+V++A
Sbjct: 32 QITILGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL--PAMDFVIVA 89
Query: 87 KRDALFIPFKELCNH 101
K+ EL NH
Sbjct: 90 KKG-----IGELDNH 99
>gi|15804298|ref|NP_290337.1| ribonuclease P [Escherichia coli O157:H7 EDL933]
gi|15833893|ref|NP_312666.1| ribonuclease P [Escherichia coli O157:H7 str. Sakai]
gi|168748578|ref|ZP_02773600.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|168753595|ref|ZP_02778602.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|168772259|ref|ZP_02797266.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|168779928|ref|ZP_02804935.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|168786536|ref|ZP_02811543.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|168798741|ref|ZP_02823748.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208806396|ref|ZP_03248733.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208813040|ref|ZP_03254369.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208819513|ref|ZP_03259833.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209396527|ref|YP_002273232.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|217326050|ref|ZP_03442134.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254795707|ref|YP_003080544.1| ribonuclease P [Escherichia coli O157:H7 str. TW14359]
gi|261258902|ref|ZP_05951435.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
FRIK966]
gi|21263938|sp|Q8XB43|RNPA_ECO57 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741387|sp|B5YXA8|RNPA_ECO5E RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12518543|gb|AAG58901.1|AE005601_7 RNase P, protein component; protein C5; processes tRNA, 4.5S RNA
[Escherichia coli O157:H7 str. EDL933]
gi|13364114|dbj|BAB38062.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
Sakai]
gi|187771399|gb|EDU35243.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|188016991|gb|EDU55113.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|189002536|gb|EDU71522.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|189359348|gb|EDU77767.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|189373418|gb|EDU91834.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|189378731|gb|EDU97147.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208726197|gb|EDZ75798.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208734317|gb|EDZ83004.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208739636|gb|EDZ87318.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209157927|gb|ACI35360.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|209754090|gb|ACI75352.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754092|gb|ACI75353.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754096|gb|ACI75355.1| 60 KD inner-membrane protein [Escherichia coli]
gi|217322271|gb|EEC30695.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254595107|gb|ACT74468.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
TW14359]
Length = 119
Score = 33.5 bits (75), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRL 70
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 76 RQHEL--PAMDFVVVAKK 91
>gi|222035418|emb|CAP78163.1| ribonuclease P protein component [Escherichia coli LF82]
Length = 119
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRL 70
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 17 QFTFVFQQPQRAG-TPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ D+V++AK+
Sbjct: 76 RQHEL--PAMDFVVVAKK 91
>gi|218530583|ref|YP_002421399.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
gi|218522886|gb|ACK83471.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
Length = 165
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+GFT+TK+ G A ERNR+RRRL+ AV A G D V+IA+R AL PF L
Sbjct: 50 LGFTITKRVGHATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLV 106
>gi|301154701|emb|CBW14164.1| protein C5 component of RNase P [Haemophilus parainfluenzae T3T1]
Length = 122
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 41 PRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
PR+G TV KK A +RNR++R ++E+ RL + D+V +AKR
Sbjct: 45 PRLGLTVAKKHLKRAHDRNRIKRLVRESFRLSQHNL--PSCDFVFVAKR 91
>gi|300742658|ref|ZP_07072679.1| ribonuclease P protein component [Rothia dentocariosa M567]
gi|300381843|gb|EFJ78405.1| ribonuclease P protein component [Rothia dentocariosa M567]
Length = 127
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKE 66
R+GF V+K G AV RNR++RRL+E
Sbjct: 35 RIGFIVSKAVGNAVTRNRVKRRLRE 59
>gi|220914668|ref|YP_002489977.1| ribonuclease P protein component [Arthrobacter chlorophenolicus
A6]
gi|254808041|sp|B8H8Z3|RNPA_ARTCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219861546|gb|ACL41888.1| ribonuclease P protein component [Arthrobacter chlorophenolicus
A6]
Length = 136
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
R+GF V+K G AV RN ++RRL+EA A + +HG ++ +
Sbjct: 43 RIGFIVSKSVGNAVVRNLVKRRLREA---GAASLREHGTGLAIVVR 85
>gi|227529864|ref|ZP_03959913.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
gi|227350233|gb|EEJ40524.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
Length = 118
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG +V K+ G AV RN ++RR+++ + L + L+ D+++IA+ A + E +
Sbjct: 42 RVGISVGKRIGNAVHRNWVKRRIRQTL-LEVKPYLRQDVDFLVIARPAADGLEMAETKKN 100
Query: 102 FVERVRR 108
V ++R
Sbjct: 101 LVHALKR 107
Searching..................................................done
Results from round 2
>gi|254780482|ref|YP_003064895.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
gi|254040159|gb|ACT56955.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
Length = 123
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM
Sbjct: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS
Sbjct: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
Query: 121 RKS 123
RKS
Sbjct: 121 RKS 123
>gi|315122062|ref|YP_004062551.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495464|gb|ADR52063.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 142
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 93/123 (75%), Positives = 105/123 (85%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNI ILKK RQFALVKKGE RKGP+FSLEVLNNNN L R+GFTVTK+QGCAV RNR+
Sbjct: 20 MSNISILKKCRQFALVKKGESRKGPYFSLEVLNNNNPKGLSRIGFTVTKRQGCAVVRNRI 79
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKE VRLC++ +LK GHDYV++AKRD L +PFKELC HFVERVR NKR Y SGK FS
Sbjct: 80 RRRLKEVVRLCSKDILKPGHDYVIVAKRDTLLVPFKELCTHFVERVRYNKRLYRSGKIFS 139
Query: 121 RKS 123
R++
Sbjct: 140 RET 142
>gi|89053132|ref|YP_508583.1| ribonuclease P protein component [Jannaschia sp. CCS1]
gi|88862681|gb|ABD53558.1| ribonuclease P protein component [Jannaschia sp. CCS1]
Length = 132
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ L KR F L + P F L+ N ++ R+GFT +KK G AV RNR
Sbjct: 21 VPSLVTLTKRADFLLAARAARVPTPAFLLQARNRDDGTSDIRIGFTCSKKVGNAVARNRA 80
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKR 111
+RRL+E R G DYVLI ++DA FK + +R+ R
Sbjct: 81 KRRLREIARAVLPTEGTPGWDYVLIGRKDATATHDFKAMQADLARALRKAHR 132
>gi|241202850|ref|YP_002973946.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240856740|gb|ACS54407.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 133
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 72/119 (60%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF ++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAAREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 131
>gi|86356095|ref|YP_467987.1| ribonuclease P [Rhizobium etli CFN 42]
gi|86280197|gb|ABC89260.1| ribonuclease P protein [Rhizobium etli CFN 42]
Length = 133
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 73/119 (61%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L+ R QF V++GE R+G F LE+L+ + + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLRSRPQFLAVREGEKRRGGLFLLEILDRKDPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A +K GHDYV++A+RD L F+EL RV + G R
Sbjct: 73 RLKEAVRLHAGFAMKPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRPGDGRPR 131
>gi|116250223|ref|YP_766061.1| ribonuclease P [Rhizobium leguminosarum bv. viciae 3841]
gi|166226735|sp|Q1MM57|RNPA_RHIL3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115254871|emb|CAK05945.1| putative ribonuclease protein component [Rhizobium leguminosarum
bv. viciae 3841]
Length = 129
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 74/119 (62%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G FF LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 9 TVGRLKSRPQFLAVREGEKRRGGFFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 68
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 69 RLKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 127
>gi|190890109|ref|YP_001976651.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|190695388|gb|ACE89473.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|327192534|gb|EGE59486.1| ribonuclease P protein [Rhizobium etli CNPAF512]
Length = 133
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/118 (50%), Positives = 73/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|325291818|ref|YP_004277682.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
gi|325059671|gb|ADY63362.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
Length = 139
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 73/119 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LK R F V+ GE R+G F LEVL+ PRVGFTVTK+QG AVERNRMRRR
Sbjct: 20 PGRLKNRSDFLAVQTGEKRRGGTFLLEVLDRKTPETEPRVGFTVTKRQGNAVERNRMRRR 79
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
LKEAVRL A +K GHDYV++A+RD L F +L + ER+ + S SRK
Sbjct: 80 LKEAVRLSAGFAMKPGHDYVIVARRDVLETAFPKLQSLLTERIEGTAKPKRSQDTRSRK 138
>gi|209547693|ref|YP_002279610.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209533449|gb|ACI53384.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 133
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/119 (51%), Positives = 73/119 (61%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHDYV++A+RD L FKEL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDYVVVARRDVLEASFKELAAELKFRVETRPKPRRSGDGRPR 131
>gi|222084729|ref|YP_002543258.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
gi|221722177|gb|ACM25333.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
Length = 137
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 78/121 (64%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R QF V++GE RKG F +E L+ ++ PRVGFTVTKK G AVERNRMR
Sbjct: 16 KTVGRLKSRPQFLAVRQGEKRKGSLFLIEALDRKLTDAEPRVGFTVTKKHGNAVERNRMR 75
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A ++ GHDYV++A+R+ L F++L N V+R+ + + SR
Sbjct: 76 RRLKEAVRLHAGFAMQPGHDYVVVARREVLTASFEKLANELVQRIETRPKHRRPETDRSR 135
Query: 122 K 122
K
Sbjct: 136 K 136
>gi|307301343|ref|ZP_07581105.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
gi|307318013|ref|ZP_07597450.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306896415|gb|EFN27164.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306903799|gb|EFN34386.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
Length = 132
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 65/120 (54%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ NK SRKS
Sbjct: 74 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIE-NKPKQKRPPAGSRKS 132
>gi|227820670|ref|YP_002824640.1| ribonuclease P [Sinorhizobium fredii NGR234]
gi|227339669|gb|ACP23887.1| ribonuclease P protein component [Sinorhizobium fredii NGR234]
Length = 128
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/122 (51%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S + LK R QF V+ GE RKGP F LEVL+ + RVGFTVTKK G AVERNRMR
Sbjct: 8 STVGRLKSRPQFLAVRAGEARKGPHFLLEVLDRKDPEGEARVGFTVTKKHGNAVERNRMR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A +K GHDYV++A+RD L PF L +R+ + SR
Sbjct: 68 RRLKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRGLQDRIENKPKPKR-PPAGSR 126
Query: 122 KS 123
K
Sbjct: 127 KP 128
>gi|150395308|ref|YP_001325775.1| ribonuclease P [Sinorhizobium medicae WSM419]
gi|150026823|gb|ABR58940.1| ribonuclease P protein component [Sinorhizobium medicae WSM419]
Length = 132
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ K SRKS
Sbjct: 74 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIE-IKPKQKRPPAGSRKS 132
>gi|15964198|ref|NP_384551.1| ribonuclease P [Sinorhizobium meliloti 1021]
gi|21263951|sp|Q92SF4|RNPA_RHIME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15073374|emb|CAC41882.1| Probable ribonuclease P protein component (protein C5)
[Sinorhizobium meliloti 1021]
Length = 128
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 65/120 (54%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 10 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ NK SRKS
Sbjct: 70 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIE-NKPKQKRPPAGSRKS 128
>gi|218675210|ref|ZP_03524879.1| ribonuclease P [Rhizobium etli GR56]
Length = 133
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 72/119 (60%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKNRPQFLAVREGEKRRGGLFLLEVLDRREPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RLKEAVRL A ++ GHD V++A+RD L F+EL RV + SG R
Sbjct: 73 RLKEAVRLHAGFAMQPGHDDVVVARRDVLKASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|159184284|ref|NP_353416.2| ribonuclease P [Agrobacterium tumefaciens str. C58]
gi|22001934|sp|Q8UIB2|RNPA_AGRT5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159139610|gb|AAK86201.2| ribonuclease P protein component [Agrobacterium tumefaciens str.
C58]
Length = 127
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 76/121 (62%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LK R +F V+ GE R+G F +EVL+ PRVGFTVTK+QG AVERNRMR
Sbjct: 6 KQPGRLKNRSEFLAVQAGEKRRGSTFLVEVLDRRAPETEPRVGFTVTKRQGNAVERNRMR 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A +K GHDYV++A+RD L F +L + +ER+ + S + SR
Sbjct: 66 RRLKEAVRLSAGVAMKPGHDYVIVARRDVLDTAFPKLQSLLIERIEGTAKPKRSQETRSR 125
Query: 122 K 122
K
Sbjct: 126 K 126
>gi|237817391|ref|ZP_04596383.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
gi|237788204|gb|EEP62420.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
Length = 184
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 48 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 107
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 108 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 167
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 168 GGKRRTERP 176
>gi|225629471|ref|ZP_03787504.1| ribonuclease P protein component [Brucella ceti str. Cudo]
gi|225615967|gb|EEH13016.1| ribonuclease P protein component [Brucella ceti str. Cudo]
Length = 184
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 48 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 107
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 108 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 167
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 168 GGKRRTERP 176
>gi|260577131|ref|ZP_05845108.1| ribonuclease P protein component [Rhodobacter sp. SW2]
gi|259020605|gb|EEW23924.1| ribonuclease P protein component [Rhodobacter sp. SW2]
Length = 144
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + I+ KR F + P F L+ N +S RVGFT +KK G AV RNR
Sbjct: 26 LPKLAIIGKRADFLRAASARRQGTPGFLLQARNRGDSQPGVRVGFTCSKKIGNAVARNRA 85
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRRNKRSYYSGK 117
+RRL+E R + + G DYVL+ + A FK L + + + +
Sbjct: 86 KRRLREVARAVLPKLAQPGWDYVLVGRPSATIARDFKALLADLATAMGQIHNAKPQAR 143
>gi|89068156|ref|ZP_01155573.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
gi|89046395|gb|EAR52452.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
Length = 130
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I L++R F +G + F L+ RVGFT +KK G AV RNR +
Sbjct: 20 PAIERLRERADFLAAARGRSKGTAGFHLQARRRPGGEGPARVGFTCSKKVGNAVARNRAK 79
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKR 111
RRL+E RL + G DYVLI +R A + PF ++ + R
Sbjct: 80 RRLREIARLELPAHGRPGWDYVLIGRRTATDVTPFAQMRADLAAALAEVHR 130
>gi|222147366|ref|YP_002548323.1| ribonuclease P [Agrobacterium vitis S4]
gi|221734356|gb|ACM35319.1| ribonuclease P protein component [Agrobacterium vitis S4]
Length = 129
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 73/121 (60%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R QF V+ GE RKG + LEVL+ + PRVGFTVTKK G AVERNRMR
Sbjct: 8 KTVGRLKSRPQFLAVRVGEKRKGRYILLEVLDRAEPDTPPRVGFTVTKKHGNAVERNRMR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVR A ++ GHDYV++A+RD L PF EL + R++ SR
Sbjct: 68 RRLKEAVRTGAGFAMQPGHDYVIVARRDVLSAPFGELRDVLQRRIQEKSNVRRQDTARSR 127
Query: 122 K 122
K
Sbjct: 128 K 128
>gi|99080153|ref|YP_612307.1| ribonuclease P protein component [Ruegeria sp. TM1040]
gi|99036433|gb|ABF63045.1| ribonuclease P protein component [Ruegeria sp. TM1040]
Length = 145
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ + +L KR +F + + ++ + L RVGFT +KK G AV RNR +
Sbjct: 35 AGMVLLTKRGEFLAAARARKQGTRSMMVQGRKRGDEGSL-RVGFTCSKKVGNAVTRNRAK 93
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
RRL+E RL + K G DYVLI + PF+++ F+ +R+
Sbjct: 94 RRLREIARLLLKEHGKPGWDYVLIGRAGETTTCPFEQMQKDFLYALRK 141
>gi|260427199|ref|ZP_05781178.1| ribonuclease P protein component [Citreicella sp. SE45]
gi|260421691|gb|EEX14942.1| ribonuclease P protein component [Citreicella sp. SE45]
Length = 144
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ L+KR F + + F L+ ++ + RVGFT +KK G AV RNR +
Sbjct: 31 PRLETLRKRPDFLSAARARRQPVGSFLLQARLRDDGDTTIRVGFTCSKKVGNAVARNRAK 90
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRR 108
RRL+E RL G+ + G DYVLI +R A PF+ L +R+
Sbjct: 91 RRLREIARLTLPGLGQPGWDYVLIGRRVATSERPFELLRKDLKYALRK 138
>gi|56695451|ref|YP_165799.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
gi|56677188|gb|AAV93854.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
Length = 141
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRM 60
S I +L+KR F + + ++ + RVGFT +KK G AV RNR
Sbjct: 27 SGISVLRKRSDFLKAARARRQGAGSMMVQARKRDAGEAEGIRVGFTCSKKVGNAVARNRA 86
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+EA RL + + G DYVLI + D PF L + +R+
Sbjct: 87 KRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDLRRALRKLHAPKP 141
>gi|56552521|ref|YP_163360.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241762239|ref|ZP_04760321.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753819|ref|YP_003226712.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56544095|gb|AAV90249.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373286|gb|EER62905.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258553182|gb|ACV76128.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 154
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +LK+R F +G+ P F L V + ++ N RVG+TVTKK G AV RNR++R
Sbjct: 46 RVAVLKRRADFLAANRGKRVAMPAFVLLVYHRHDDNPDMRVGYTVTKKTGNAVVRNRIKR 105
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R + V+ G D++LI +R A F +L + + R +R
Sbjct: 106 RFRALVQSLLPVGGVEGADHILIGRRAAFHGNFDDLYRQLSKALARMRR 154
>gi|302381829|ref|YP_003817652.1| ribonuclease P protein component [Brevundimonas subvibrioides ATCC
15264]
gi|302192457|gb|ADL00029.1| ribonuclease P protein component [Brevundimonas subvibrioides ATCC
15264]
Length = 138
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I L KR QF KG ++ L N+ + VGFT T+K G AV+RNR +
Sbjct: 5 PKIQRLTKRPQFLAAAKGVSLARGAVVVQRLERNDGDPAIGVGFTATRKVGGAVDRNRCK 64
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+EA R G DYVLIA++ + L + + R G S
Sbjct: 65 RRLREAARAMVPLHGLPGSDYVLIARQGTADRSWDRLLDDVKSALTRLA--TTPGPGRSG 122
Query: 122 KS 123
K+
Sbjct: 123 KA 124
>gi|261216464|ref|ZP_05930745.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
gi|260918071|gb|EEX84932.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
Length = 145
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 129 GGKRRTERP 137
>gi|126733908|ref|ZP_01749655.1| ribonuclease P protein component [Roseobacter sp. CCS2]
gi|126716774|gb|EBA13638.1| ribonuclease P protein component [Roseobacter sp. CCS2]
Length = 186
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRMR 61
++C+L KR F + P L+ RVGFT +KK G AV RNR +
Sbjct: 76 SVCVLTKRADFVRASNARRQGTPGIHLQGRKRAEGEAAGIRVGFTCSKKVGNAVARNRAK 135
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
RRL+E R+ + G DYVL+ ++D +PF +L +++
Sbjct: 136 RRLREVARIVLPEMGLDGWDYVLVGRKDITATLPFDQLIADMRRAMKK 183
>gi|218660817|ref|ZP_03516747.1| ribonuclease P [Rhizobium etli IE4771]
Length = 107
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 66/95 (69%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R QF V++GE R+G F +EVL+ + RVGFTVTKK G AVERNRMRR
Sbjct: 13 TVGRLKSRPQFLAVREGEKRRGALFLMEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
RLKEAVRL A ++ GHDYV++A+RD L F+E
Sbjct: 73 RLKEAVRLHAGFAMRPGHDYVVVARRDVLDASFQE 107
>gi|149914929|ref|ZP_01903458.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
gi|149811117|gb|EDM70954.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
Length = 133
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L +R F + + + P ++ + + RVGFT +KK G AV RNR +RR
Sbjct: 22 LQTLVERADFLRAARAQWKAMPSMVVQARDRKDGEATVRVGFTCSKKVGNAVARNRAKRR 81
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERV 106
L+E R + G DYVLI + + PF+ L + +
Sbjct: 82 LREVARAVLPDAARPGWDYVLIGRANVTGALPFETLKSDLRTAL 125
>gi|254696032|ref|ZP_05157860.1| ribonuclease P [Brucella abortus bv. 3 str. Tulya]
Length = 141
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 GGKRRTERP 133
>gi|49474530|ref|YP_032572.1| ribonuclease P [Bartonella quintana str. Toulouse]
gi|60390410|sp|Q6FZ17|RNPA_BARQU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49240034|emb|CAF26453.1| Ribonuclease p protein component [Bartonella quintana str.
Toulouse]
Length = 133
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LEV + S L+ RVGFTVT+K G AV+
Sbjct: 7 KHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAGIKSPLVARVGFTVTRKNGNAVK 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR++RRL+EAVR+ ++ G DYV++A DAL PF L + R++ +
Sbjct: 67 RNRIKRRLREAVRVGLTDDIEAGTDYVIVAHSDALHAPFTFLISELSRRIKPKTKHQKRQ 126
Query: 117 KN 118
+
Sbjct: 127 QG 128
>gi|103485504|ref|YP_615065.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
gi|98975581|gb|ABF51732.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
Length = 240
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 51/109 (46%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L KR +F +G P F L V + + +G+TV+KK G AV RNRM+RR
Sbjct: 129 VRTLNKRSEFLAANRGLRFPMPGFVLLVRPRGDDSDALGIGYTVSKKVGNAVTRNRMKRR 188
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E R G D+VLI + A I F EL ++R +
Sbjct: 189 FRELARALLPESGIAGADHVLIGRPGANDIAFAELGEQLDSALKRAAKK 237
>gi|240850504|ref|YP_002971903.1| ribonuclease P [Bartonella grahamii as4aup]
gi|240267627|gb|ACS51215.1| ribonuclease P [Bartonella grahamii as4aup]
Length = 130
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LEV + +L+ RVGFTVT+K G AV+
Sbjct: 4 KHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTTERKDSLVARVGFTVTRKNGNAVK 63
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++ +
Sbjct: 64 RNRIKRRLREAVRVGVTNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIKPKIKHQQQQ 123
Query: 117 KN 118
+
Sbjct: 124 QG 125
>gi|261217608|ref|ZP_05931889.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261220832|ref|ZP_05935113.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|261318320|ref|ZP_05957517.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261320485|ref|ZP_05959682.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261757210|ref|ZP_06000919.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|265986118|ref|ZP_06098675.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
gi|265995812|ref|ZP_06108369.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|260919416|gb|EEX86069.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|260922697|gb|EEX89265.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261293175|gb|EEX96671.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261297543|gb|EEY01040.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261737194|gb|EEY25190.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|262550109|gb|EEZ06270.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|264658315|gb|EEZ28576.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
Length = 145
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 128
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 129 GGKRRTERP 137
>gi|62317851|ref|YP_223704.1| ribonuclease P [Brucella abortus bv. 1 str. 9-941]
gi|83269830|ref|YP_419121.1| ribonuclease P [Brucella melitensis biovar Abortus 2308]
gi|256015781|ref|YP_003105790.1| ribonuclease P [Brucella microti CCM 4915]
gi|260545086|ref|ZP_05820907.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260756234|ref|ZP_05868582.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260760397|ref|ZP_05872745.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260763637|ref|ZP_05875969.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260882058|ref|ZP_05893672.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261322755|ref|ZP_05961952.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261753968|ref|ZP_05997677.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|265985156|ref|ZP_06097891.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|265992580|ref|ZP_06105137.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|265998999|ref|ZP_05464621.2| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|297249213|ref|ZP_06932914.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
gi|62198044|gb|AAX76343.1| RnpA, ribonuclease P, protein component [Brucella abortus bv. 1
str. 9-941]
gi|82940104|emb|CAJ13151.1| Bacterial ribonuclease P protein [Brucella melitensis biovar
Abortus 2308]
gi|255998441|gb|ACU50128.1| ribonuclease P [Brucella microti CCM 4915]
gi|260098357|gb|EEW82231.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260670715|gb|EEX57655.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260674058|gb|EEX60879.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260676342|gb|EEX63163.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260871586|gb|EEX78655.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261298735|gb|EEY02232.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261743721|gb|EEY31647.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|262763450|gb|EEZ09482.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|263091778|gb|EEZ16109.1| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|264663748|gb|EEZ34009.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|297173082|gb|EFH32446.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
Length = 145
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 129 GGKRRTERP 137
>gi|163745587|ref|ZP_02152947.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
gi|161382405|gb|EDQ06814.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
Length = 140
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKKQGCAVERNR 59
+ L KR F + + P F L++ RVGFT +KK G AV RNR
Sbjct: 25 RLETLTKRPDFQRASRAKRVATPGFILQMRPRREDEPSAAPIRVGFTCSKKVGNAVARNR 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVR 107
+RRL+E RL G DYV + +R+A F +L +
Sbjct: 85 AKRRLREIARLTLPQAGLAGMDYVFVGRREATAALSFDQLLADLTRALD 133
>gi|83854928|ref|ZP_00948458.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
gi|83842771|gb|EAP81938.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
Length = 136
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F + P F L++ RVGFT +KK G AV RNR +
Sbjct: 18 RVQTLKNRPDFQRASRAPRVAMPGFILQMRKRAAGEADGIRVGFTCSKKVGNAVARNRAK 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYYSG 116
RRL+E RL + G DYVL+ + DA +PF +L + F + + SG
Sbjct: 78 RRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQSDFTKALGILHGKQRSG 133
>gi|83941452|ref|ZP_00953914.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
gi|83847272|gb|EAP85147.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
Length = 136
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F + P F L++ RVGFT +KK G AV RNR +
Sbjct: 18 RVQTLKNRPDFQRASRAPRVAMPGFILQMRKRAAGEADGIRVGFTCSKKVGNAVARNRAK 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYYSG 116
RRL+E RL + G DYVL+ + DA +PF +L + F + + SG
Sbjct: 78 RRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQSDFTKALGILHGKQRSG 133
>gi|254705521|ref|ZP_05167349.1| ribonuclease P [Brucella pinnipedialis M163/99/10]
Length = 141
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMXKGERRS 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 GGKRRTERP 133
>gi|148558200|ref|YP_001257933.1| ribonuclease P [Brucella ovis ATCC 25840]
gi|148369485|gb|ABQ62357.1| ribonuclease P protein component [Brucella ovis ATCC 25840]
Length = 145
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFLQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 129 GGKRRTERP 137
>gi|84499793|ref|ZP_00998081.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
gi|84392937|gb|EAQ05148.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
Length = 117
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
++ +++R F + + ++ + + RVGFT +KK G AV RNR +R
Sbjct: 9 SLQTMRRRADFLACARARRQGTKGMLVQGRDRG-EDAGIRVGFTCSKKVGNAVARNRAKR 67
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKR 111
RL+E RL + G DYVLI RDA PF++L F+ +R+ R
Sbjct: 68 RLREVARLLLPDHGRPGWDYVLIGNRDATADRPFEDLKADFLHALRKLHR 117
>gi|163868924|ref|YP_001610151.1| ribonuclease P [Bartonella tribocorum CIP 105476]
gi|161018598|emb|CAK02156.1| ribonuclease P protein component [Bartonella tribocorum CIP 105476]
Length = 130
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LEV + S+L+ RVGFTVT+K G AV+
Sbjct: 4 KHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAEKKSSLVARVGFTVTRKNGNAVK 63
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++ +
Sbjct: 64 RNRIKRRLREAVRVGITNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIKPKTKHQQRQ 123
Query: 117 KN 118
+
Sbjct: 124 QG 125
>gi|49475953|ref|YP_033994.1| ribonuclease P [Bartonella henselae str. Houston-1]
gi|60390412|sp|Q6G2G7|RNPA_BARHE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49238761|emb|CAF28022.1| Ribonuclease p protein component [Bartonella henselae str.
Houston-1]
Length = 133
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LEV + S+L+ RVGFTVT++ G AV+
Sbjct: 7 KHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAERESSLVARVGFTVTRRNGNAVK 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR++RRL+EAVR+ ++ G DYV++A DAL PF L N R++ +
Sbjct: 67 RNRIKRRLREAVRVGLTDDMEAGTDYVIVAHPDALHAPFTSLVNELSRRIKPKTKHQKRQ 126
Query: 117 KN 118
+
Sbjct: 127 QG 128
>gi|161621070|ref|YP_001594956.1| ribonuclease P [Brucella canis ATCC 23365]
gi|163845136|ref|YP_001622791.1| ribonuclease P [Brucella suis ATCC 23445]
gi|225686777|ref|YP_002734749.1| ribonuclease P [Brucella melitensis ATCC 23457]
gi|254690663|ref|ZP_05153917.1| ribonuclease P [Brucella abortus bv. 6 str. 870]
gi|254699141|ref|ZP_05160969.1| ribonuclease P [Brucella abortus bv. 2 str. 86/8/59]
gi|254700217|ref|ZP_05162045.1| ribonuclease P [Brucella suis bv. 5 str. 513]
gi|254703338|ref|ZP_05165166.1| ribonuclease P [Brucella suis bv. 3 str. 686]
gi|254720150|ref|ZP_05181961.1| ribonuclease P [Brucella sp. 83/13]
gi|254732585|ref|ZP_05191163.1| ribonuclease P [Brucella abortus bv. 4 str. 292]
gi|256058818|ref|ZP_05449034.1| ribonuclease P [Brucella neotomae 5K33]
gi|256111045|ref|ZP_05452107.1| ribonuclease P [Brucella melitensis bv. 3 str. Ether]
gi|256255845|ref|ZP_05461381.1| ribonuclease P [Brucella abortus bv. 9 str. C68]
gi|260567732|ref|ZP_05838201.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306839544|ref|ZP_07472351.1| ribonuclease P protein component [Brucella sp. NF 2653]
gi|189043728|sp|A9MCU8|RNPA_BRUC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043729|sp|A9WW33|RNPA_BRUSI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808055|sp|C0RMG2|RNPA_BRUMB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161337881|gb|ABX64185.1| ribonuclease P protein component [Brucella canis ATCC 23365]
gi|163675859|gb|ABY39969.1| ribonuclease P protein component [Brucella suis ATCC 23445]
gi|225642882|gb|ACO02795.1| ribonuclease P protein component [Brucella melitensis ATCC 23457]
gi|260154397|gb|EEW89478.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306405376|gb|EFM61648.1| ribonuclease P protein component [Brucella sp. NF 2653]
Length = 141
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 GGKRRTERP 133
>gi|254710752|ref|ZP_05172563.1| ribonuclease P [Brucella pinnipedialis B2/94]
gi|254712778|ref|ZP_05174589.1| ribonuclease P [Brucella ceti M644/93/1]
gi|254715847|ref|ZP_05177658.1| ribonuclease P [Brucella ceti M13/05/1]
gi|256029135|ref|ZP_05442749.1| ribonuclease P [Brucella pinnipedialis M292/94/1]
gi|256157327|ref|ZP_05455245.1| ribonuclease P [Brucella ceti M490/95/1]
gi|256253695|ref|ZP_05459231.1| ribonuclease P [Brucella ceti B1/94]
gi|260167773|ref|ZP_05754584.1| ribonuclease P [Brucella sp. F5/99]
Length = 141
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 GGKRRTERP 133
>gi|260565067|ref|ZP_05835552.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|265990313|ref|ZP_06102870.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
gi|260152710|gb|EEW87803.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|263000982|gb|EEZ13672.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
Length = 145
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F + V PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 129 GGKRRTERP 137
>gi|126724916|ref|ZP_01740759.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
gi|126706080|gb|EBA05170.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
Length = 136
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP---RVGFTVTKKQGCAVERNRM 60
+LKKR F K F ++ + R+G+T +KK G AV RNR
Sbjct: 22 TSVLKKRADFLKAAKARRLVTNGFLIQARPRSEEEPPAPLIRIGYTCSKKVGNAVARNRA 81
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+E RL G DYVLI + PF ++ + + + + +
Sbjct: 82 KRRLREIARLVIPHHGNPGWDYVLIGRAGKTADHPFDQMQQNLRDALLKLHGAKK 136
>gi|114770130|ref|ZP_01447668.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
gi|114548967|gb|EAU51850.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
Length = 133
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ + KR F + F L+ N N+ + RVGFT +KK G AV RNR +RR
Sbjct: 25 VKRITKRSDFIQASHAKRLGVKGFLLQARNRNDDDQTIRVGFTCSKKVGNAVARNRAKRR 84
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKR 111
L+E L K G DYVLI K++ F +L N +++ +
Sbjct: 85 LREITNLILISSAKKGWDYVLIGKKEVTASRDFIKLKNDLTYALQKIHK 133
>gi|163733762|ref|ZP_02141204.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
gi|161392873|gb|EDQ17200.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
Length = 137
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S RVGFT +KK G AV RNR
Sbjct: 23 SGLTRITKRSDFLRAARAPRVVTPGFILQMRKRTPSEAEGIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+E RL + G DYV I + ++ F +L + + + ++
Sbjct: 83 KRRLREIARLTLTDHGQQGVDYVFIGRAKETAQRSFSQLMDDLGVALDKLHKAPR 137
>gi|254476732|ref|ZP_05090118.1| ribonuclease P [Ruegeria sp. R11]
gi|214030975|gb|EEB71810.1| ribonuclease P [Ruegeria sp. R11]
Length = 151
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQGCAVERN 58
++ KRR F + + ++ N + R+GFT +KK G AV RN
Sbjct: 37 PQPVVIAKRRDFLAAARARRQGTKGMMVQGRNRRSDEPGGDGIRMGFTCSKKVGNAVARN 96
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
R +RRL+E R+ + G DYVLI + PF+EL + +++
Sbjct: 97 RAKRRLREVARMILPLHGRAGWDYVLIGRAGQTADRPFEELKRDLIYALKK 147
>gi|84685366|ref|ZP_01013264.1| ribonuclease P protein component [Maritimibacter alkaliphilus
HTCC2654]
gi|84666523|gb|EAQ12995.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2654]
Length = 134
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F + P F L+ + + + + RVG+T +KK G AV RNR +RR
Sbjct: 25 LETLKKRPDFLACARARKAPAPAFLLQGRDRRDDDTVVRVGYTASKKVGNAVARNRAKRR 84
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
L+E R + G DYVL+A+ + F + + R
Sbjct: 85 LREIARAVIADEGRAGWDYVLVARPGSTVDRDFDAMTTDLRAALAR 130
>gi|67461278|sp|Q5LW06|RNPA_SILPO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 125
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRM 60
S I +L+KR F + + ++ + RVGFT +KK G AV RNR
Sbjct: 11 SGISVLRKRSDFLKAARARRQGAGSMMVQARKRDAGEAEGIRVGFTCSKKVGNAVARNRA 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+EA RL + + G DYVLI + D PF L + +R+
Sbjct: 71 KRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDLRRALRKLHAPKP 125
>gi|17988620|ref|NP_541253.1| ribonuclease P [Brucella melitensis bv. 1 str. 16M]
gi|256043890|ref|ZP_05446810.1| ribonuclease P [Brucella melitensis bv. 1 str. Rev.1]
gi|21542218|sp|Q8YDA2|RNPA_BRUME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|17984423|gb|AAL53517.1| ribonuclease p protein component [Brucella melitensis bv. 1 str.
16M]
Length = 141
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F + V PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 GGKRRTERP 133
>gi|319408959|emb|CBI82616.1| ribonuclease P protein component [Bartonella schoenbuchensis R1]
Length = 123
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LE+ + L+ RVGFTVT+K G AV+
Sbjct: 4 KHPCRIRKRADFLAVRTGEKRRGPLFLLEIKPREQTAEIKHPLVARVGFTVTRKNGNAVK 63
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR++RRL+EAVR+ + ++ G DYV++A DAL PF L N R++ ++
Sbjct: 64 RNRIKRRLREAVRVGLKDNIEAGTDYVIVAHPDALHAPFSSLINELNRRIKPKIKNQQRQ 123
>gi|261312925|ref|ZP_05952122.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
gi|261301951|gb|EEY05448.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
Length = 121
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|146276127|ref|YP_001166286.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
gi|145554368|gb|ABP68981.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
Length = 137
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +
Sbjct: 25 PAPEILRKRADFLRAAQARRQGTPGFLLQAR-RREAEGGIRVGFTCSKKVGNAVMRNRAK 83
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRR 108
RRL+ R G DYVL+ + A P+ L +R+
Sbjct: 84 RRLRALARELLTTRGHPGWDYVLVGRPGATIERPYAALLADLERALRQ 131
>gi|23500745|ref|NP_700185.1| ribonuclease P [Brucella suis 1330]
gi|23464399|gb|AAN34190.1| ribonuclease P, protein component [Brucella suis 1330]
Length = 145
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRKS 123
K + +
Sbjct: 129 GRKRRTERP 137
>gi|315498838|ref|YP_004087642.1| ribonuclease p protein component [Asticcacaulis excentricus CB 48]
gi|315416850|gb|ADU13491.1| ribonuclease P protein component [Asticcacaulis excentricus CB 48]
Length = 112
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+LK R F K + P ++ N+ + R+GFT TKK G +VERNR +R
Sbjct: 2 TFPVLKNRSDFLAANKAAYQARPTVVIQARFRNDGDETIRIGFTATKKTGGSVERNRAKR 61
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R++EA R + GHDYV IA+ ++ L + + R
Sbjct: 62 RMREAARTLLPDHGRPGHDYVFIARDATKSCTWQGLLDDVKRALIRLSPK 111
>gi|319898442|ref|YP_004158535.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
gi|319402406|emb|CBI75947.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
Length = 124
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVE 56
+ C ++KR F V+ GE R+GP F LE+ + L+ RVGFTVT+K G AV+
Sbjct: 4 KHPCRIRKRVDFLAVRTGEKRRGPLFLLEIKPREKTAETKYPLVARVGFTVTRKHGNAVQ 63
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RNR++RRL+EAVR+ ++ G DYV++A RD L PF L + R++
Sbjct: 64 RNRIKRRLREAVRVGLVNEMEAGTDYVIVAHRDVLHAPFTFLISELSRRIK 114
>gi|294675906|ref|YP_003576521.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
gi|294474726|gb|ADE84114.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
Length = 162
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN----LLPRVGFTVTKKQGCAVERN 58
I IL+KR F + P F L+ ++ L RVGFT +KK G AV RN
Sbjct: 29 TILILRKRADFLRAASAQRMSAPGFLLQARKRGEADTAAADLIRVGFTCSKKLGNAVARN 88
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERV 106
R +RRL+E RL + G DYVL+ + +A F L V +
Sbjct: 89 RAKRRLREVARLGLPALGLPGWDYVLVGRPEATASRDFAALQADLVRAI 137
>gi|86135815|ref|ZP_01054394.1| ribonuclease P protein component [Roseobacter sp. MED193]
gi|85826689|gb|EAQ46885.1| ribonuclease P protein component [Roseobacter sp. MED193]
Length = 146
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNR 59
+ + +L KR +F + + ++ RVGFT +KK G AV RNR
Sbjct: 34 LEPLVVLSKRSEFLAAARARRQGTKSMMVQGRQRKEGEAEGFRVGFTCSKKVGNAVARNR 93
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRR 108
+RRL+EA RL G+ + G DYVLI + +A F++L +++
Sbjct: 94 AKRRLREAARLVLPGIGRDGWDYVLIGRAEATASRGFEDLKRDLAYAIKK 143
>gi|197103857|ref|YP_002129234.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
gi|196477277|gb|ACG76805.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
Length = 120
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I LKKR F K ++ + L R GFT TK+ G AV+RNR +RR
Sbjct: 6 IERLKKRADFLACAKAPSCAKGAVVVQARPRGDGAPLVRAGFTATKRIGGAVQRNRAKRR 65
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++EA RL + G DYV IA+ P+ L + + R + +
Sbjct: 66 MREAARLLLPEHARPGVDYVFIARGGVTTRPWARLLDDVKSALIRLAADREAPEG 120
>gi|29427802|sp|Q8FV30|RNPA_BRUSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 141
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRKS 123
K + +
Sbjct: 125 GRKRRTERP 133
>gi|254467228|ref|ZP_05080639.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
gi|206688136|gb|EDZ48618.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
Length = 141
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ KRR F + + ++ N + + R+GFT +KK G AV RNR
Sbjct: 29 PKLEVMAKRRDFLACARPPALKQGTKGMMVQGRNRQDDGGI-RMGFTCSKKVGNAVARNR 87
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
+RRL+EA R+ + G DYVLI + D PF+EL + +++
Sbjct: 88 AKRRLREAARMILPVHGRPGWDYVLIGRADETAQRPFEELKRDLIYALKK 137
>gi|84517255|ref|ZP_01004610.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
gi|84508930|gb|EAQ05392.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
Length = 130
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRMRR 62
+ +L KR F + P L+ RVGFT +KK G AV RNR +R
Sbjct: 21 LTVLTKRADFVRASHALRQGTPGIHLQARERARGEAAGIRVGFTCSKKVGNAVARNRAKR 80
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRR 108
RL+E R + G DYVL+ + D +PF L +R+
Sbjct: 81 RLREVARQVLPEQGRDGWDYVLVGRHDVTASLPFDALVADLRRALRK 127
>gi|254473832|ref|ZP_05087227.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
gi|211957218|gb|EEA92423.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
Length = 152
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
N+ LKKR +F V KG F L+ + PR+G+TVTKK G +VER+R++
Sbjct: 17 KNMKTLKKRSEFLTVAKGGRTARRAFVLQAAKTRSDG-APRMGYTVTKKTGNSVERSRIK 75
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+ AV + + G DYVL+ +R AL PF++L V+ + S S+
Sbjct: 76 RRLRAAVASLDLDIAQTGADYVLVGRRAALSQPFEDLLKDLKGSVKNAFKPRKSRPIRSK 135
>gi|16125021|ref|NP_419585.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|221233744|ref|YP_002516180.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
gi|21542224|sp|Q9AA39|RNPA_CAUCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808056|sp|B8H1E9|RNPA_CAUCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13422005|gb|AAK22753.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|220962916|gb|ACL94272.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
Length = 149
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L+KR F L K +++ + + RVGFT TKK G AVERNR +R
Sbjct: 9 KFERLRKRPDFLLAAKAPALSRGAVFIQMRQRTDDDPTVRVGFTATKKIGGAVERNRAKR 68
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RL+EA RL + HDYV IA+ + L + +
Sbjct: 69 RLREAARLVLPLHARPSHDYVFIARGGTGTREWARLLDDVKTAL 112
>gi|110678775|ref|YP_681782.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
gi|109454891|gb|ABG31096.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
Length = 137
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S+ RVGFT +KK G AV RNR
Sbjct: 23 SRLTQITKRADFLRAARAPRAVTPGFILQMRRRPASDAAVIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCNHFVERVRR 108
+RRL+E RL G DYV I + + PF L + +
Sbjct: 83 KRRLREIARLILPEKGLPGVDYVFIGRANTTAQRPFPLLMQDLATALDK 131
>gi|259416985|ref|ZP_05740905.1| ribonuclease P [Silicibacter sp. TrichCH4B]
gi|259348424|gb|EEW60201.1| ribonuclease P [Silicibacter sp. TrichCH4B]
Length = 106
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ KR F + + ++ + L RVGFT +KK G AV RNR +RRL+E
Sbjct: 1 MTKRGDFLAAARARKQGTRSMMVQGRKRGDDGPL-RVGFTCSKKVGNAVMRNRAKRRLRE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
RL + K G DYVLI + PF+++ F +R+
Sbjct: 60 IARLLLKEHGKPGWDYVLIGRAGETTTCPFEQMQKDFAYALRK 102
>gi|255262795|ref|ZP_05342137.1| ribonuclease P [Thalassiobium sp. R2A62]
gi|255105130|gb|EET47804.1| ribonuclease P [Thalassiobium sp. R2A62]
Length = 133
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRM 60
+ +LK R +F K + P F+L+ RVGFT +KK G AV RNR
Sbjct: 22 ARPQVLKNRSEFIAASKAQRVSSPSFNLQARPRQAGEADGIRVGFTCSKKVGNAVARNRA 81
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRR 108
+RRL+E RL + G+DYVL+ + F+ L + + +
Sbjct: 82 KRRLREIARLVLPSAGRDGYDYVLVGRPGTTAARNFEALLDDLRRALEK 130
>gi|295690946|ref|YP_003594639.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
gi|295432849|gb|ADG12021.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
Length = 149
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L+KR F L K +++ ++ + + RVGFT TKK G AVERNR +R
Sbjct: 11 RFERLRKRADFLLAAKAPALSRGAVFIQMRKRSDEDPVVRVGFTATKKIGGAVERNRAKR 70
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
RL+EA RL + HDYV IA+ + L + + + + G SR
Sbjct: 71 RLREAARLVLPLHARPSHDYVFIARGGTGSREWGRLLDDVKSALISLA-AEHDGAKVSRS 129
Query: 123 S 123
S
Sbjct: 130 S 130
>gi|254438989|ref|ZP_05052483.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
gi|198254435|gb|EDY78749.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
Length = 139
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I ++K R F K + ++++ + + + RVGFT +KK G AV RNR +RR
Sbjct: 32 IVVMKTRANFVAASKARYQTAASLTVQMRDRRDGDNAVRVGFTCSKKVGNAVARNRAKRR 91
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCNHFVERVRR 108
L+E RL + K GHDYVLI K+D F+ L F + + +
Sbjct: 92 LREIARLDLPTLAKAGHDYVLIGKKDVTENRDFEALRADFAKALGK 137
>gi|121602433|ref|YP_989322.1| ribonuclease P [Bartonella bacilliformis KC583]
gi|120614610|gb|ABM45211.1| ribonuclease P protein component [Bartonella bacilliformis KC583]
Length = 121
Score = 107 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVE 56
C ++KR F V+KGE R+GP F LE+ + +S L R+GFTVT+K G AV+
Sbjct: 4 KPPCRIRKRADFLAVRKGEKRRGPLFLLEMRSRQKTAGTSSPLAARIGFTVTRKNGNAVK 63
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
RNR++RRL+EAVR+ K G DYV++A D L+ PF L + R++ +++
Sbjct: 64 RNRIKRRLREAVRVGLTNDTKAGVDYVIVAYPDVLYAPFTSLISELSRRMKSKEKNQK 121
>gi|126737061|ref|ZP_01752796.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
gi|126721646|gb|EBA18349.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
Length = 141
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
+ +L KRR F + + + ++ LN +S + RVGFT +KK G AV RN
Sbjct: 28 VQKPEVLAKRRDFLACARPPAQKQGTKGMMVQGLNRRDSGGI-RVGFTCSKKVGNAVARN 86
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRR 108
R +RRL+EA R+ + G DYVLI + + PF+EL V +R+
Sbjct: 87 RAKRRLREAARMILPVHGRTGWDYVLIGRANETAQRPFEELKRDLVYALRK 137
>gi|300024926|ref|YP_003757537.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
gi|299526747|gb|ADJ25216.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
Length = 154
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKKQGCAVERN 58
+ + LK R +F V+ G P F +EV + R GFT+TKK G AV RN
Sbjct: 18 IPTLQTLKSRPEFLAVRGGRRSSTPAFLIEVRERPATENGGTARFGFTITKKIGNAVTRN 77
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNKRSYYS 115
R+RRRLK A AEG + DYV++A+ AL PF L + N + S
Sbjct: 78 RIRRRLKAAFAATAEGRARPSCDYVIVARHAALDRPFAALLEDVARAFAALHDNAKRSRS 137
Query: 116 GKNFSR 121
G+ R
Sbjct: 138 GEARPR 143
>gi|85703243|ref|ZP_01034347.1| ribonuclease P protein component [Roseovarius sp. 217]
gi|85672171|gb|EAQ27028.1| ribonuclease P protein component [Roseovarius sp. 217]
Length = 111
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +L+KR F + + + ++ + + + RVGFT +KK G AV RNR +RR
Sbjct: 1 MSVLRKRSDFLAAARAQRQGTGSMMVQGRDRRDGDGAIRVGFTCSKKVGNAVARNRAKRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
L+ R K G DYVLI + D PF+ L +R+
Sbjct: 61 LRAVARELLAAEGKSGWDYVLIGRADETATRPFEALKRDLCYALRKLA 108
>gi|221640553|ref|YP_002526815.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
gi|221161334|gb|ACM02314.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
Length = 137
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +
Sbjct: 25 PAPEILRKRADFLRAAQARRQGTPGFLLQAR-RREAEGGIRVGFTCSKKVGNAVLRNRAK 83
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRR 108
RRL+ R G DYVL+ + A P+ L +R+
Sbjct: 84 RRLRAIARAVLTLQGHAGWDYVLVGRPGATVERPYPALLADLERALRQ 131
>gi|126463481|ref|YP_001044595.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
gi|126105145|gb|ABN77823.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
Length = 137
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +
Sbjct: 25 PAPEILRKRADFLRAAQARRQGTPGFLLQAR-RREAEGGIRVGFTCSKKVGNAVLRNRAK 83
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRR 108
RRL+ R G DYVL+ + A P+ L +R+
Sbjct: 84 RRLRAIARAVLTLQGHAGWDYVLVGRPGATVERPYAALLADLERALRQ 131
>gi|163739497|ref|ZP_02146907.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
gi|161387250|gb|EDQ11609.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
Length = 150
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQGCAVERN 58
++ KRR F + + ++ + + + R+GFT +KK G AV RN
Sbjct: 36 PQPDVIAKRRDFLAAARARRQGTKGMMVQGRKRHADDPVGDGIRMGFTCSKKVGNAVARN 95
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
R +RRL+ R+ + G DYVLI + PF +L N + +++
Sbjct: 96 RAKRRLRGVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKNDLIYALKK 146
>gi|77464641|ref|YP_354145.1| ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332559534|ref|ZP_08413856.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
gi|77389059|gb|ABA80244.1| Ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332277246|gb|EGJ22561.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
Length = 137
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
IL+KR F + + P F L+ + RVGFT +KK G AV RNR +
Sbjct: 25 PAPEILRKRADFLRAAQARRQGTPGFLLQAR-RREAEGGIRVGFTCSKKVGNAVLRNRAK 83
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRR 108
RRL+ R G DYVL+ + A P+ L +R+
Sbjct: 84 RRLRAIARAVLTVQGHAGWDYVLVGRPGATVERPYAALLADLERALRQ 131
>gi|217977384|ref|YP_002361531.1| ribonuclease P protein component [Methylocella silvestris BL2]
gi|217502760|gb|ACK50169.1| ribonuclease P protein component [Methylocella silvestris BL2]
Length = 150
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQGCAVERNRM 60
LK+R F KG+ F+L+ + S+ PR GFTVTKK G AV RNR+
Sbjct: 10 PARLKRRADFVRAAKGKRFHAKGFTLQAVERPESDRATAAPRFGFTVTKKVGGAVVRNRI 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRR KEA+R + DYV++A+ +AL + F + + + + + S S
Sbjct: 70 RRRFKEALRTAEALPARPCRDYVVVARIEALRLAFATMQVELIRAIDKIESSQSKPDGRS 129
Query: 121 RK 122
RK
Sbjct: 130 RK 131
>gi|114765432|ref|ZP_01444547.1| ribonuclease P protein component [Pelagibaca bermudensis HTCC2601]
gi|114542275|gb|EAU45305.1| ribonuclease P protein component [Roseovarius sp. HTCC2601]
Length = 120
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L+KR +F + + ++ ++ + RVGFT +KK G AV RNR +R
Sbjct: 8 RIETLRKRPEFLAAARARRQPANAMLVQARERDDGSDTVRVGFTCSKKVGNAVARNRAKR 67
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYY 114
R++E RL G DYVLI +RDA PF+ L +R+
Sbjct: 68 RMREVARLTLPTKGVPGWDYVLIGRRDATAERPFELLIKDLEYALRKIHGPSK 120
>gi|126728222|ref|ZP_01744038.1| ribonuclease P protein component [Sagittula stellata E-37]
gi|126711187|gb|EBA10237.1| ribonuclease P protein component [Sagittula stellata E-37]
Length = 130
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRMRR 62
+ ++K+R F + F L+ PRVGFT +KK G AV RNR +R
Sbjct: 18 LTVIKQRPDFLKAARARRVPCEGFLLQARKRQPGEAEGPRVGFTCSKKVGNAVARNRAKR 77
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVR 107
RL+E RL G ++ HDYVLI + + PF L + + +
Sbjct: 78 RLREIARLVMPGRVRPDHDYVLIGRAEKTANRPFDLLQDDLGKALA 123
>gi|85374956|ref|YP_459018.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
gi|122543775|sp|Q2N7X0|RNPA_ERYLH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84788039|gb|ABC64221.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
Length = 121
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+++KR F +G P F L L + N R G TVTKK G AV RNRM+
Sbjct: 3 DKPAVIRKRADFLAANRGLRVARPGFVL--LAHPNQGQGQRYGITVTKKIGNAVVRNRMK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RR +E + HD++LI + + F +L + +RR +
Sbjct: 61 RRFRELLWELLPQQGLADHDHILIGREGGIERDFGKLREELMLALRRAREGKGDP 115
>gi|163740290|ref|ZP_02147684.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
gi|161386148|gb|EDQ10523.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
Length = 122
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN---NNSNLLPRVGFTVTKKQGCAVERN 58
++ KRR F + + ++ ++ R+GFT +KK G AV RN
Sbjct: 8 PQPDVIAKRRDFLAAARARRQGTKGMMVQGRKRHAYDSVGDGIRMGFTCSKKVGNAVSRN 67
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
R +RRL+E R+ + G DYVLI + PF +L N + +++
Sbjct: 68 RAKRRLREVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKNDLIYALKK 118
>gi|323703943|ref|ZP_08115573.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
gi|323531101|gb|EGB21010.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
Length = 109
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LKK F + + G+ + L + N +S + R GF+++KK G AV RNR
Sbjct: 1 MSKFVPLKKNLDFKNIYQYGKSAANRYLVLYMHPNGSS--IRRFGFSISKKVGNAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+RR LKE RL + GHDYV I ++ + + +L H + R
Sbjct: 59 LRRLLKEICRLNLDRF-PDGHDYVFIVRQPSFDQGYHQLEKHVWHVLGR 106
>gi|85709450|ref|ZP_01040515.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
gi|85688160|gb|EAQ28164.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
Length = 125
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+L KR F KG P F L L N R G TVTKK G AV RNRM+RR
Sbjct: 2 PTVLTKRTDFLAANKGLRNARPGFVL--LTRPNDGEGVRYGITVTKKIGNAVVRNRMKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E +R HD+VLI + + + + + R K
Sbjct: 60 FRELLRAALPEGGLANHDHVLIGRSGGVERDYSTMAEELHAALARAKE 107
>gi|254451170|ref|ZP_05064607.1| ribonuclease P [Octadecabacter antarcticus 238]
gi|198265576|gb|EDY89846.1| ribonuclease P [Octadecabacter antarcticus 238]
Length = 129
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
++K R F K ++++ + + + RVGFT +KK G AV RNR +R
Sbjct: 21 RFAVMKTRANFVAASKARYETATSLTVQMRDRRDGDDSMRVGFTCSKKVGNAVARNRAKR 80
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
RL+E RL + K GHDYVLI K+D F+ L + + +
Sbjct: 81 RLREIARLDLPHLAKPGHDYVLIGKKDLTATREFEALRADLAKALGK 127
>gi|299820844|ref|ZP_07052733.1| ribonuclease P [Listeria grayi DSM 20601]
gi|299817865|gb|EFI85100.1| ribonuclease P [Listeria grayi DSM 20601]
Length = 133
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V K+G+ F + +L +++ R+G +V+KK G AV RNR
Sbjct: 17 MKKAYRIKKNQEFQTVFKRGKSVANRQFVVYLLKQESADTHFRIGLSVSKKIGNAVCRNR 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++++ EG + GHDY++IA+ A + F E+ ++ + + K
Sbjct: 77 VKRYIRQSFHE-LEGEVASGHDYIIIARNPAANMSFHEVKKSLTHVLKLARVLRKTVK 133
>gi|296534913|ref|ZP_06897227.1| ribonuclease P protein component [Roseomonas cervicalis ATCC 49957]
gi|296264761|gb|EFH11072.1| ribonuclease P protein component [Roseomonas cervicalis ATCC 49957]
Length = 125
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M++ LK+RR+F V KG P L+ L L RVGFT TKK G AV RNR
Sbjct: 1 MASPPRLKRRREFLRVAGKGSRAARPSLVLQALPETAGPL--RVGFTATKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RRL+EA RL G D VLI + F +L +R+
Sbjct: 59 AKRRLREAARLLLGQDAPPGWDLVLIGREGTGGRRFDQLLADLRGALRQA 108
>gi|326793320|ref|YP_004311141.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
gi|326544084|gb|ADZ85943.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
Length = 112
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +F V +KG+ + + NN R+G +V+KK G +V R+R
Sbjct: 1 MKYAQSLKKNYEFRTVYRKGKSLANKYLVVYRYKNNLPE--NRLGISVSKKVGNSVVRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL E + K G D+V+IA+ A ++++ N + ++++K
Sbjct: 59 VTRLIRESYRLNEEFIDKEGWDFVVIARSAANGASYQDISNALINLLKQHK 109
>gi|218512685|ref|ZP_03509525.1| ribonuclease P [Rhizobium etli 8C-3]
Length = 96
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/83 (59%), Positives = 59/83 (71%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIA 86
LKEAVRL A ++ GHDYV++A
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVA 96
>gi|294501990|ref|YP_003565690.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|295707341|ref|YP_003600416.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
gi|294351927|gb|ADE72256.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|294805000|gb|ADF42066.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
Length = 117
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KKG+ F L VL+ + RVGF+V KK G AV RNR
Sbjct: 1 MKKRYRIKKNDEFQTVFKKGKSVANRQFVLYVLDKPDQEHF-RVGFSVGKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R L + + LK DY++IA++ A + ++E+ + +R K + +
Sbjct: 60 VKR-LAKQIMFEFTPYLKQDKDYIVIARQPAATMSYEEIKSSLQHVFKRGKLLTHRQND 117
>gi|148556517|ref|YP_001264099.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
gi|148501707|gb|ABQ69961.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
Length = 106
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+L++R F G P F L V +++ + R+G TVTKK G AV RNR++RR +
Sbjct: 1 MLQRRADFLAANGGRRAPMPGFVLLVRPRGDNDPVMRLGITVTKKIGNAVVRNRVKRRFR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R G D+VLI + + F +L ++ + + R
Sbjct: 61 ALARELLPVAGIAGADHVLIGRAGGVERDFAQLRAELLKALGKIAR 106
>gi|254419734|ref|ZP_05033458.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
gi|196185911|gb|EDX80887.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
Length = 134
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 49/121 (40%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L +R QF KG ++ L + + VGFT T+K G AV RNR +R
Sbjct: 6 QIKRLLRRPQFLAAAKGVSEARGGVVIQRLERGDGSPHIGVGFTATRKIGGAVVRNRAKR 65
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
RL+EA R G DYV IA+ + L + + R + +R
Sbjct: 66 RLREAARAMLPVHGLPGSDYVFIARMGTTERAWDRLLDDVKSTLTRLATPKADRPSPARA 125
Query: 123 S 123
Sbjct: 126 P 126
>gi|94495883|ref|ZP_01302462.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
gi|94424575|gb|EAT09597.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
Length = 190
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 46/117 (39%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I+ +R F +G P F L V + + R G TVTKK G AV RNRM+RR
Sbjct: 57 PAIMVRRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRR 116
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ R + G D+VLI + + F L + + +
Sbjct: 117 FRVLARELLPALGIAGADHVLIGREGGIERDFSLLRAELEKALGKIMTRPVDAPRDP 173
>gi|149202701|ref|ZP_01879673.1| ribonuclease P protein component [Roseovarius sp. TM1035]
gi|149143983|gb|EDM32017.1| ribonuclease P protein component [Roseovarius sp. TM1035]
Length = 109
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+L+KR F + + ++ + + + RVGFT +KK G AV RNR +RRL+
Sbjct: 1 MLRKRADFLAAARARRQGTGSMLVQGRDRRDGDTAIRVGFTCSKKVGNAVARNRAKRRLR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRR 108
R G DYVLI K + P++ L +R+
Sbjct: 61 ALARELLPAQGLPGWDYVLIGKAEETGARPYEALKRDLAYALRK 104
>gi|167644609|ref|YP_001682272.1| ribonuclease P protein component [Caulobacter sp. K31]
gi|167347039|gb|ABZ69774.1| ribonuclease P protein component [Caulobacter sp. K31]
Length = 148
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I LKKR F K +++ ++ + L RVGFT TKK G +V+RNR +R
Sbjct: 15 KIERLKKRPDFLKAAKAPALARGAVFMQMRPRHDDDPLIRVGFTATKKIGGSVQRNRAKR 74
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF-VERVRRNKRSYYSGKNFSR 121
RL+EA RL + DYV IA+ + L + + + +G S
Sbjct: 75 RLREAARLLLPLHGRPSCDYVFIARGGTGQRAWGRLLDDVKIALISLAAEHDRAGSGSSP 134
Query: 122 KS 123
Sbjct: 135 AP 136
>gi|144899248|emb|CAM76112.1| Bacterial ribonuclease P protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 140
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGC 53
++ LKKR F V + + P L+V + R+GFT +KK G
Sbjct: 4 SLARLKKRPDFLRVAGQRKKWAAPGLILQVAPRPDGPPDMPAQEADAIRIGFTCSKKVGN 63
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+V RNR RRRLK AV + + G DYV+I +R+ + + L ++R
Sbjct: 64 SVARNRARRRLKAAVDELFPALARPGLDYVVIGRRETVDRAYSLLLQDLRTALKRVGALS 123
Query: 114 YSGKN 118
+ +
Sbjct: 124 TAEPS 128
>gi|307294064|ref|ZP_07573908.1| ribonuclease P protein component [Sphingobium chlorophenolicum L-1]
gi|306880215|gb|EFN11432.1| ribonuclease P protein component [Sphingobium chlorophenolicum L-1]
Length = 139
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ KR F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 1 MGKRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRV 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
R G D+VLI + + + F L + + + S G+ R+
Sbjct: 61 LARELLPVHGVAGADHVLIGRSEGIERDFGLLRGELEKALHKVM-SRPVGETPPRR 115
>gi|188587523|ref|YP_001919068.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229470481|sp|B2A474|RNPA_NATTJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|179352210|gb|ACB86480.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 115
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS I LKK QF V + G+ + L VL N+ + + RVGF+V KK G +V RNR
Sbjct: 1 MSQIVTLKKNYQFRRVFRYGQSYATKYIVLFVLENSLN--INRVGFSVGKKVGNSVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+E RL ++ G+D +L+A+ A + + + F+ +++K
Sbjct: 59 VKRLLREVYRLNNPNMM-QGYDLILLARFRADELDYHKCQREFIRLTKKSK 108
>gi|90419892|ref|ZP_01227801.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
gi|90335933|gb|EAS49681.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
Length = 139
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ + KR +F ++G GP F +E L+ ++ PRVG TVTKK G AV RNR+R
Sbjct: 11 KAVGRMTKRAEFLAARRGRRLNGPSFFIEALDRGDAAP-PRVGLTVTKKVGNAVVRNRIR 69
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+EA+RL + + G DYV++A+RD L +PF++L + RV R K+ R
Sbjct: 70 RRLREAIRLDTQADMAPGIDYVVVARRDVLTLPFEQLKDELSRRVARMKQPQREPAKTER 129
Query: 122 KS 123
+
Sbjct: 130 RP 131
>gi|118589755|ref|ZP_01547160.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
gi|118437841|gb|EAV44477.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
Length = 133
Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR +F V KG F ++ L +S+ RVG+TVTKK G +V R+R++RR
Sbjct: 1 MDTLKKRSEFLAVAKGGRLGRRAFVVQGLKR-DSDDASRVGYTVTKKTGNSVVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS-GKNFSRK 122
L+ AV + D+VL+A+ AL +PF+++ + + G+ R+
Sbjct: 60 LRAAVAELVPEDIPQRADFVLVARDSALTLPFEKIVADLKSGLSQVLDPQTPRGRGKPRR 119
>gi|150392477|ref|YP_001322526.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
gi|166991073|sp|A6TXE9|RNPA_ALKMQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149952339|gb|ABR50867.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
Length = 111
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LKK + F +V KG + ++NNN R+GFTV+KK G +V R+R
Sbjct: 1 MQSNNKLKKNQDFRMVYQKGRSMANKLLIIYIVNNNLE--YNRIGFTVSKKVGNSVVRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R +KE+ RL EG +K HD V IA+ + +KE+ + + +R+ K
Sbjct: 59 VKRLMKESYRLN-EGKIKTSHDIVFIARPNCKESTYKEIESALLHLIRKMK 108
>gi|189023101|ref|YP_001932842.1| ribonuclease P [Brucella abortus S19]
gi|189021675|gb|ACD74396.1| Bacterial ribonuclease P protein [Brucella abortus S19]
Length = 125
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKE 66
V+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKE
Sbjct: 1 MTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKE 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A+R A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 61 AIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTERP 117
>gi|254502535|ref|ZP_05114686.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
gi|222438606|gb|EEE45285.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
Length = 137
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F V KG F ++ L ++ PR+G+TVTKK G + R+R++RR
Sbjct: 1 MNTLKKRSDFLAVAKGGRVGRRAFVVQGLQR-SAEAAPRIGYTVTKKTGNSAVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRK 122
L+ AV A + D+VL+A+ AL +PF L + + + G+ RK
Sbjct: 60 LRAAVAELASAEIPQNADFVLVARESALTLPFPNLVADLKSGLNQVLDPATPRGRGKPRK 119
>gi|310816964|ref|YP_003964928.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
gi|308755699|gb|ADO43628.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
Length = 142
Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNR 59
S + I+ +RR F L + + F L+ + RVGFT +KK G AV R
Sbjct: 21 SGLAIITQRRDFLLAARAFRQGTTGFHLQARKREAGEDIAGIRVGFTCSKKVGNAVARGH 80
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRR 108
+RRL+E R G DYVL+ + F+++ V R
Sbjct: 81 AKRRLREVARAVLPVAGLEGWDYVLVGRNGTTASADFEQMKVDLARAVAR 130
>gi|258517433|ref|YP_003193655.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
gi|257781138|gb|ACV65032.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
Length = 109
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N L+K ++ V G FF + + N+ +N R GF+V KK G AV RNR
Sbjct: 1 MANFITLRKNSEYKKVYVTGRSVANRFFVIFAITNSLNN--SRFGFSVGKKIGKAVLRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+RR LKE RL + + G+D+V++A++D + + F ++ NH + V + +
Sbjct: 59 IRRLLKEICRLNND-IFPVGYDFVILARKDVVTLNFDQMKNHLAKLVLKLSK 109
>gi|210624038|ref|ZP_03294155.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
gi|210153245|gb|EEA84251.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
Length = 115
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + K G+ + + +L N R+G +++KK G AV RNR+RR +K
Sbjct: 9 IKKDYEFRKIYKHGKSFANKYLVVYILKNKTDQT--RIGISISKKVGNAVTRNRIRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E+ RL + +K G+D V I++ A +K++ +R+NK
Sbjct: 67 ESYRLNIDENIKKGYDLVFISRVAAKDATYKDIEKAMNHLMRKNK 111
>gi|313887636|ref|ZP_07821318.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846245|gb|EFR33624.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 111
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
C LKK +F V + G + NN + PR G T TKK G AV RN +RR
Sbjct: 2 KDCYLKKNSEFQRVYSNKKISGSRYITLFTAKNNRD-YPRFGITATKKVGNAVNRNFIRR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RLK +R + +K G+DYV +AK+DA FK+ N F ++R K+
Sbjct: 61 RLKHLLRENSHN-IKPGYDYVFVAKKDACDSDFKDFKNSFFSVLKRQKK 108
>gi|89101260|ref|ZP_01174081.1| ribonuclease P [Bacillus sp. NRRL B-14911]
gi|89084025|gb|EAR63205.1| ribonuclease P [Bacillus sp. NRRL B-14911]
Length = 124
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F KKG+ F + L R+G +V+KK G AV RN+
Sbjct: 1 MKKEFRVKKNKEFQEAFKKGKSFANRQFVIYALKKTGQEHF-RIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++A + + + +DYV+IA++ + F E+ N ++ K G +
Sbjct: 60 IKRYVRQAFHE-LDASIHNEYDYVIIARKPVADMGFHEIKNSLSHVLKVGKVLRGPGHHR 118
Query: 120 SRK 122
R+
Sbjct: 119 DRQ 121
>gi|126701307|ref|YP_001090204.1| ribonuclease P [Clostridium difficile 630]
gi|254977341|ref|ZP_05273813.1| ribonuclease P [Clostridium difficile QCD-66c26]
gi|255094671|ref|ZP_05324149.1| ribonuclease P [Clostridium difficile CIP 107932]
gi|255102898|ref|ZP_05331875.1| ribonuclease P [Clostridium difficile QCD-63q42]
gi|255308718|ref|ZP_05352889.1| ribonuclease P [Clostridium difficile ATCC 43255]
gi|255316425|ref|ZP_05358008.1| ribonuclease P [Clostridium difficile QCD-76w55]
gi|255519085|ref|ZP_05386761.1| ribonuclease P [Clostridium difficile QCD-97b34]
gi|255652268|ref|ZP_05399170.1| ribonuclease P [Clostridium difficile QCD-37x79]
gi|260685222|ref|YP_003216507.1| ribonuclease P [Clostridium difficile CD196]
gi|260688881|ref|YP_003220015.1| ribonuclease P [Clostridium difficile R20291]
gi|306521983|ref|ZP_07408330.1| ribonuclease P [Clostridium difficile QCD-32g58]
gi|123066515|sp|Q181T2|RNPA_CLOD6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115252744|emb|CAJ70589.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Clostridium difficile]
gi|260211385|emb|CBA67044.1| ribonuclease P protein component [Clostridium difficile CD196]
gi|260214898|emb|CBE07707.1| ribonuclease P protein component [Clostridium difficile R20291]
Length = 114
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
EA RL + +K G+D V IA+ + FK++ V+R
Sbjct: 67 EAYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKRT 110
>gi|317131006|ref|YP_004097288.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
gi|315475954|gb|ADU32557.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
Length = 121
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F +V ++G+ F + L + L PR+G +V+KK G AVERNR
Sbjct: 1 MKKENRLKKNEDFQIVFQRGKSAANRQFVMYSLIKQDQTL-PRIGLSVSKKIGNAVERNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++EA+R +K D V+IA++ + + ++ + ++ K S
Sbjct: 60 IKRLMREALREVLP-HIKENVDIVIIARKPVINMSVFQITDSIQHVLKVGKVIKRSQIEV 118
Query: 120 SRK 122
++K
Sbjct: 119 NKK 121
>gi|125974854|ref|YP_001038764.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|256003889|ref|ZP_05428876.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281418691|ref|ZP_06249710.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|125715079|gb|ABN53571.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|255992227|gb|EEU02322.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281407775|gb|EFB38034.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|316941976|gb|ADU76010.1| ribonuclease P protein component [Clostridium thermocellum DSM
1313]
Length = 126
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N LKK +F KKG+ G L V+ N+ + R+G TV KK G +V+RNR
Sbjct: 1 MKNTVPLKKNSEFLRLYKKGKFFAGKNIVLYVMKNDLG--INRLGITVGKKFGKSVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
M+R ++E RL E +K G+D V +A+ FK++ +++
Sbjct: 59 MKRLIRENYRL-YEEFVKKGYDLVFVARNTEQMPDFKDVKKEMKFLMKK 106
>gi|163757864|ref|ZP_02164953.1| ribonuclease P [Hoeflea phototrophica DFL-43]
gi|162285366|gb|EDQ35648.1| ribonuclease P [Hoeflea phototrophica DFL-43]
Length = 142
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/119 (47%), Positives = 71/119 (59%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LK R F V+KG +GPFF LE L+ ++ PR+G+TVTKKQG AVERNRMR
Sbjct: 9 KKPGRLKNRPDFLAVQKGTRLRGPFFLLETLDRGLADKAPRIGYTVTKKQGNAVERNRMR 68
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRL+EAVR A + GHDYV++A+RD L PF L ERV+ + S S
Sbjct: 69 RRLREAVRHLAGVPFRPGHDYVVVARRDTLKAPFDRLVQALSERVQDSVTSPRPRHKRS 127
>gi|114569010|ref|YP_755690.1| ribonuclease P protein component [Maricaulis maris MCS10]
gi|114339472|gb|ABI64752.1| ribonuclease P protein component [Maricaulis maris MCS10]
Length = 189
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 9/126 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNS---------NLLPRVGFTVTKKQ 51
+ + LK RR+F KG ++ + + S GFT T+K
Sbjct: 56 LPTVKRLKTRREFLQAAKGRKAVRSGVVIQARSRDGSLLLGADEKAPAHIGAGFTATRKI 115
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV RNR +RRL+E RL + G DYV IA+ + L +
Sbjct: 116 GGAVIRNRAKRRLREIARLLLPLHGQPGIDYVFIARATTPERDWSRLVGDVESALVSLAN 175
Query: 112 SYYSGK 117
SG
Sbjct: 176 GKTSGD 181
>gi|149186356|ref|ZP_01864669.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
gi|148829945|gb|EDL48383.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
Length = 127
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +++KR F +G P F L L N R G TVTKK G AV RNRM+
Sbjct: 3 PSLSVIRKRSDFLAANRGTRNAKPGFVL--LTRPNEGQGKRYGITVTKKIGNAVVRNRMK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
RR +E + HD++LI + + F
Sbjct: 61 RRFRELLWAALPDGGLPDHDHILIGREGGVERDF 94
>gi|255657637|ref|ZP_05403046.1| ribonuclease P [Clostridium difficile QCD-23m63]
gi|296452682|ref|ZP_06894373.1| ribonuclease P [Clostridium difficile NAP08]
gi|296880065|ref|ZP_06904034.1| ribonuclease P [Clostridium difficile NAP07]
gi|296258464|gb|EFH05368.1| ribonuclease P [Clostridium difficile NAP08]
gi|296428932|gb|EFH14810.1| ribonuclease P [Clostridium difficile NAP07]
Length = 114
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E RL + +K G+D V IA+ + FK++ V+R
Sbjct: 67 EVYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKRT 110
>gi|261750712|ref|ZP_05994421.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|261740465|gb|EEY28391.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|326411185|gb|ADZ68249.1| ribonuclease P [Brucella melitensis M28]
gi|326554476|gb|ADZ89115.1| ribonuclease P [Brucella melitensis M5-90]
Length = 123
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKEA+R
Sbjct: 2 RNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 62 CHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTERP 115
>gi|294010747|ref|YP_003544207.1| RNase P protein component [Sphingobium japonicum UT26S]
gi|292674077|dbj|BAI95595.1| RNase P protein component [Sphingobium japonicum UT26S]
Length = 136
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ +R F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 1 MSRRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRV 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRKS 123
R G D+VLI + + + F L + +R+ R R S
Sbjct: 61 LARELLPVHGVAGADHVLIGRSEGIERDFGLLRGELEKALRKVMSRPLGEAPPRRRDS 118
>gi|311032254|ref|ZP_07710344.1| ribonuclease P [Bacillus sp. m3-13]
Length = 117
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V +KG+ F + + ++ L R+G +V+KK G AV RNR
Sbjct: 1 MRKEQRIKKNKEFQHVFQKGKSMANRQFVIYAVQKSDQPLF-RIGLSVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R +++AV E L G D V+IA++ A + F+E+ +++
Sbjct: 60 IKRLVRQAVHEIKEQ-LPGGVDIVVIARKPAADMSFEEVKKSLQHVIKK 107
>gi|329848430|ref|ZP_08263458.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
gi|328843493|gb|EGF93062.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
Length = 116
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L+ R F K ++ ++ + RVGFT TKK G AV RNR++RR
Sbjct: 1 MIRLQHRADFLRAAKAAYAARTGVVVQARLRDDDSADVRVGFTATKKIGNAVVRNRVKRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L+EA R + + GHDYV IA+ P++ L + + R + +
Sbjct: 61 LREAARSLLPDLGRPGHDYVFIARAGTFERPWQALLDDVKAALIRLGANKPA 112
>gi|304392413|ref|ZP_07374354.1| ribonuclease P protein component [Ahrensia sp. R2A130]
gi|303295517|gb|EFL89876.1| ribonuclease P protein component [Ahrensia sp. R2A130]
Length = 172
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGCA 54
+K+R F +KG F +++ L RVGFTVTKK G A
Sbjct: 23 QTVRMKRRADFVACRKGSRVSRDAFGIQLRKRKPDELLGPGEKLHHFRVGFTVTKKIGNA 82
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
V RNR++RRL+ A G+D V +A AL PF+ L + + +
Sbjct: 83 VVRNRIKRRLRAASAEITVPESLAGYDAVFMANEPALGAPFQTLTAQMTQGLAKA 137
>gi|110632736|ref|YP_672944.1| ribonuclease P [Mesorhizobium sp. BNC1]
gi|123058254|sp|Q11LE6|RNPA_MESSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110283720|gb|ABG61779.1| ribonuclease P protein component [Chelativorans sp. BNC1]
Length = 120
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L KR +F V++G +G F LE+L + + PRVG TVTKK G AVERNR+RRR
Sbjct: 10 PGRLTKRAEFLAVQRGLKLRGRLFLLELLARGDDDP-PRVGITVTKKVGNAVERNRIRRR 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
L+EAVR+ A + G DYV++ +R+ L PF L + R+R NK +
Sbjct: 69 LREAVRVHAADDMATGTDYVIVGRREILDAPFGALKDELSRRIRGNKPART 119
>gi|56422032|ref|YP_149350.1| ribonuclease P [Geobacillus kaustophilus HTA426]
gi|261420906|ref|YP_003254588.1| ribonuclease P [Geobacillus sp. Y412MC61]
gi|297531690|ref|YP_003672965.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|319768576|ref|YP_004134077.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
gi|67461269|sp|Q5KU54|RNPA_GEOKA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56381874|dbj|BAD77782.1| ribonuclease P (protein component) [Geobacillus kaustophilus
HTA426]
gi|261377363|gb|ACX80106.1| ribonuclease P protein component [Geobacillus sp. Y412MC61]
gi|297254942|gb|ADI28388.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|317113442|gb|ADU95934.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
Length = 121
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V ++G F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNEEFQEVFQRGASTANRQFVIYTLDRPEQ-PYFRIGLSVSKKLGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R +++ L + + G DYV+IA++ + + E+ + +R++ G+
Sbjct: 60 IKRYIRQCF-LELKEEIAPGKDYVVIARQPVAEMNYAEVKKSLIHVLRKSGGLKKGGQ 116
>gi|299143465|ref|ZP_07036545.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517950|gb|EFI41689.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 110
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
C LKK F V + +L V N RVGFT+TKK G AV RN+++R
Sbjct: 5 KDCYLKKNIDFQRVY-AKRNINGNKNLTVFFKKNGLDNKRVGFTITKKIGNAVIRNKIKR 63
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RL+E RL + +L G+DYV + K+ + + +KEL F+ ++ +
Sbjct: 64 RLREIYRLNFD-ILPEGYDYVFVVKKTCVDLSYKELEKSFIHLSKKLR 110
>gi|119383624|ref|YP_914680.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
gi|119373391|gb|ABL68984.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
Length = 149
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN--LLPRVGFTVTKKQGCAVERNRM 60
+ L+KR F + P F L+ RVGFT +KK G AV RNR
Sbjct: 31 RLETLRKRADFLRAASARRQGMPGFLLQARRRPEGEAGQAIRVGFTCSKKLGNAVTRNRA 90
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+RRL+ R GV + G DYVL+ + A
Sbjct: 91 KRRLRALAREVMPGVARPGWDYVLVGRPGAT 121
>gi|312964015|ref|ZP_07778486.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
gi|311282050|gb|EFQ60660.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
Length = 134
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L + ++ G D V++A++ + EL HF + +R R++ S ++
Sbjct: 75 LHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTHKPAPAVSTET 126
>gi|197302266|ref|ZP_03167325.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
gi|197298697|gb|EDY33238.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
Length = 111
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G+ + ++ N + RVG +V+KK G +V R+
Sbjct: 1 MKFSESLKKNRDFQYVYKNGKSYANKCLVMYIIPNEQN--KNRVGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL +E + G+D V+IA+ A + E+ N +
Sbjct: 59 LTRLIRESYRL-SEEHFQCGYDIVVIARTSAKEKSYHEIENALIHL 103
>gi|297585592|ref|YP_003701372.1| ribonuclease P protein component [Bacillus selenitireducens MLS10]
gi|297144049|gb|ADI00807.1| ribonuclease P protein component [Bacillus selenitireducens MLS10]
Length = 120
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K G+ F + + N+ + R G +++KK G AV RNR
Sbjct: 1 MKKEHRLRKNEDFQTVFKHGKSVANRQFVVYTFDRNDQDP-SRFGLSISKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +KE +R + L G D V+IA++ + F ++ R
Sbjct: 60 IKRLVKEVIRHQLD-HLPLGQDVVIIARKPVATMDFHDVNKSIHHVFR 106
>gi|288554604|ref|YP_003426539.1| ribonuclease P [Bacillus pseudofirmus OF4]
gi|288545764|gb|ADC49647.1| ribonuclease P [Bacillus pseudofirmus OF4]
Length = 120
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F+ V KKG+ F L L R+G +V+KK G AV RNR
Sbjct: 1 MKKEQRIKKNEDFSSVFKKGQSVANRQFVLYSLKKEGQASF-RIGLSVSKKVGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ + + L G+D+V+IA+ + F ++ + +++ +
Sbjct: 60 IKRYVRTVFQ-TYQDELPGGYDFVIIARHPVSEMDFHQVESSLKHVMKKAR 109
>gi|296283116|ref|ZP_06861114.1| ribonuclease P protein component [Citromicrobium bathyomarinum
JL354]
Length = 128
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+L R F +G F L V N R G TVTKK G AV RNRM+RR +
Sbjct: 10 VLTARADFLAANRGLRVPARGFVLLV--RPNEGRGMRYGITVTKKIGNAVVRNRMKRRFR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
E + HD+VLI + + F +L + V + + R R+
Sbjct: 68 ELLWAHLPEHGLPDHDHVLIGRDGGVERDFAKLSSELVGALEKAARGEGQRGRPPRR 124
>gi|294853975|ref|ZP_06794647.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
gi|294819630|gb|EFG36630.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
Length = 123
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKEA+R
Sbjct: 2 RNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 62 CHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTERP 115
>gi|229087977|ref|ZP_04220082.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
gi|228695334|gb|EEL48214.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
Length = 119
Score = 98.0 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + G+ F + L R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAEQ-PYFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|331092110|ref|ZP_08340941.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402311|gb|EGG81882.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
Length = 130
Score = 97.6 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F +V K G+ + + N R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNRDFQIVYKRGKSYANKYLVMY--KKPNGLNKNRIGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR----RNKRSYYSGKNFSR 121
E+ RL E ++ G+D V+I + A + E+ + + + N +G S
Sbjct: 65 ESYRL-QESKMQCGYDIVVIVRASANGKSYGEMDSALIHLAKLHHIYNPMEKKNGDGISE 123
Query: 122 KS 123
++
Sbjct: 124 ET 125
>gi|329888538|ref|ZP_08267136.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
gi|328847094|gb|EGF96656.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
Length = 138
Score = 97.6 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L +R QF KG + ++ L+ + + R+GFT T+K G AV RNR +R
Sbjct: 2 KIDRLLRRPQFLAAAKGVSQARGAVVVQQLDRADGDPTVRLGFTATRKIGGAVVRNRAKR 61
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RL+EA RL + G DYV IA+ + L + + R + R
Sbjct: 62 RLREAARLLTPLHGRAGCDYVFIARMGTADRDWDRLLDDVKSALTRLATPRTASDMGDR 120
>gi|325663381|ref|ZP_08151831.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470835|gb|EGC74065.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
Length = 111
Score = 97.2 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNQDFQIVYKTGKSYANKYLVMYVRENQSGG--NRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A ++E+ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQSGYDIVVIARVSANGRSYREMESALIHL 103
>gi|149182292|ref|ZP_01860771.1| ribonuclease P [Bacillus sp. SG-1]
gi|148849984|gb|EDL64155.1| ribonuclease P [Bacillus sp. SG-1]
Length = 123
Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KKG F + L+ + R+G +V+KK G AV RN+
Sbjct: 1 MRKEQRVKKNIEFQEVFKKGTSIANRQFVVYKLHKEDQ-QYFRIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ L + +K+ +DYV+IA++ A + F E+ + ++++K S +
Sbjct: 60 IKRYIRQVF-LELKDEVKNNYDYVIIARKPAADMDFHEIKKSMIHVLKKSKALRVSQQTQ 118
Query: 120 SRK 122
+ K
Sbjct: 119 TDK 121
>gi|229015404|ref|ZP_04172410.1| Ribonuclease P protein component [Bacillus cereus AH1273]
gi|229026928|ref|ZP_04183251.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228734386|gb|EEL85057.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228745883|gb|EEL95879.1| Ribonuclease P protein component [Bacillus cereus AH1273]
Length = 119
Score = 97.2 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + LN R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYQLNKEKQ-PYFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQAIME-LKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 116
>gi|228994206|ref|ZP_04154106.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
gi|229003009|ref|ZP_04160868.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228758237|gb|EEM07423.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228765658|gb|EEM14312.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
Length = 119
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + G+ F + L + R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAEQS-YFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRMIRQSIAE-LKDEIDSGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|114706828|ref|ZP_01439728.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
gi|114537776|gb|EAU40900.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
Length = 128
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M+ L KR +F ++G GP+F +E L + PR G TVTKK G AV RNR+
Sbjct: 1 MTKAGRLTKRSEFLAARRGRRLNGPYFFIETLVRGDDEP-PRFGLTVTKKVGNAVARNRI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRL+EA+R A +++G DYV++A+RD L + F L + R R +
Sbjct: 60 RRRLREAIRTAAGSEMRNGVDYVIVARRDVLNVAFVTLKDELSRRFSRFDPAKSGPSKNQ 119
Query: 121 RK 122
R+
Sbjct: 120 RQ 121
>gi|157694478|ref|YP_001488940.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194016429|ref|ZP_03055043.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
gi|166991075|sp|A8FJG3|RNPA_BACP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157683236|gb|ABV64380.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194011902|gb|EDW21470.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
Length = 119
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +F V KKG+ F + L+ N + L R+G +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEEFQKVFKKGQSMANRQFVIYQLDQPNQDEL-RLGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ L LK DY++IA++ A + F+E R++ K
Sbjct: 60 IKRLIRQVF-LEEGHKLKQEKDYIVIARKPASELTFEETKKSLQHLFRKSAVYQQQPKKS 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|229542317|ref|ZP_04431377.1| ribonuclease P protein component [Bacillus coagulans 36D1]
gi|229326737|gb|EEN92412.1| ribonuclease P protein component [Bacillus coagulans 36D1]
Length = 114
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K G+ F + VL N R+G +V+KK G AV+RN+
Sbjct: 1 MRKSYRIKKNTEFQEVFKHGKSFANRQFVVYVLEKENRKHF-RIGLSVSKKLGNAVKRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ L + + G+DY++IA++ A + + E+ + ++
Sbjct: 60 IKRYIRQVF-LELKEDIPPGYDYIIIARKPAAEMNYHEVKKSLIHVLK 106
>gi|307943179|ref|ZP_07658524.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
gi|307773975|gb|EFO33191.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
Length = 131
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L+KR +F V KG F ++ L RVG+TVTKK G +V R+R++RR
Sbjct: 1 METLRKRAEFLAVSKGGRIGRRAFLIQGLARK-GAAQSRVGYTVTKKTGNSVVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
L+ V + D+V++A++DAL PF ++
Sbjct: 60 LRAVVAALDPKEVPTEADFVIVARQDALTAPFPKMIADL 98
>gi|229593498|ref|YP_002875617.1| ribonuclease P [Pseudomonas fluorescens SBW25]
gi|229365364|emb|CAY53751.1| ribonuclease P protein component [Pseudomonas fluorescens SBW25]
Length = 134
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L + ++ G D V++A++ + EL HF + +R R+ S ++
Sbjct: 75 LHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTNKPAPAVSTET 126
>gi|260461162|ref|ZP_05809411.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
gi|259033196|gb|EEW34458.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
Length = 117
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
N L KR +F V++GE R+G FF +EVL+ + +PRVGFTVTKK G AV RNR+RR
Sbjct: 11 NPKRLLKRAEFLAVRRGEKRRGRFFLVEVLDRGDGG-VPRVGFTVTKKVGNAVVRNRVRR 69
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RLKEAVR+ A + G+DYV++ + DAL PF +L R+R +
Sbjct: 70 RLKEAVRVHAADDMMPGNDYVIVGRDDALRAPFGQLKAELSRRLRGTR 117
>gi|158321894|ref|YP_001514401.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
gi|166991074|sp|A8MKS3|RNPA_ALKOO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158142093|gb|ABW20405.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
Length = 114
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K F V K + +L N RVGFTV+KK G +V R+R
Sbjct: 1 MKAINRLRKNEDFRKVYKKRKSMANKLLIIYILEN--GYNFNRVGFTVSKKVGKSVIRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L E+ RL E +K G+D + +A+ + +KE+ + + +++
Sbjct: 59 VKRLLNESYRLNNEK-VKQGYDIIFVARNTCVDASYKEIESAILHLLKKM 107
>gi|228995395|ref|ZP_04155067.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
gi|228764348|gb|EEM13223.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
Length = 119
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + G+ F + L + R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAEQS-YFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRVIRQSIAE-LKDEIDSGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|87198600|ref|YP_495857.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
gi|87134281|gb|ABD25023.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
Length = 162
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQGC 53
M+ I ++KR F +G P F L V + + ++ R G TVTKK G
Sbjct: 1 MTRIATIRKRADFVAANRGIRVARPGFVLLVNRVAKPGDDASVADAEMRFGVTVTKKIGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV RNRM+RR + +R G D+V+I + + F L + R
Sbjct: 61 AVVRNRMKRRFRALLREALPTGGIPGADHVMIGREGGVERDFALLREELAVALSRAAAGK 120
Query: 114 YSGK 117
Sbjct: 121 GDPP 124
>gi|152977686|ref|YP_001377203.1| ribonuclease P [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189043727|sp|A7GVQ0|RNPA_BACCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|152026438|gb|ABS24208.1| ribonuclease P protein component [Bacillus cytotoxicus NVH 391-98]
Length = 115
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIKKNDEFQAVFQKGRSSANRQFVIYQLDKETQ-PYFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + ++E + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEFKKSLIHAFKRS 108
>gi|319405207|emb|CBI78812.1| ribonuclease P protein component (fragment) [Bartonella sp. AR
15-3]
Length = 109
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
V GE R+GP F LE+ + L RVGFTVT+K G AV+RNR++RRL+EAV
Sbjct: 1 MAVHTGEKRRGPLFLLEIKRREQTAKTKYPLTARVGFTVTRKNGNAVQRNRIKRRLREAV 60
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R+ ++ G DYV+IA R+ L PF L + R++ +
Sbjct: 61 RVGLTNEMEAGTDYVIIAHRNILHAPFTLLISELSRRIKSKTKKTT 106
>gi|229142236|ref|ZP_04270760.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
gi|228641254|gb|EEK97561.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
Length = 119
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 116
>gi|312113263|ref|YP_004010859.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
gi|311218392|gb|ADP69760.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
Length = 132
Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVT-----------KKQ 51
+ LK R +F V+KG P F ++ L + + PR GFTV+ +K+
Sbjct: 1 METLKTRAEFKRVQKGRKWVTPAFIMQGLARADIESQGPRFGFTVSGKSVAVEGEGGRKR 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV+RNR RRRLKEAVRL + DYV+I + AL F++L + +
Sbjct: 61 GKAVDRNRARRRLKEAVRLTFAEAARPNLDYVIIGRAVALTRKFEDLLADMRRAFHKVGQ 120
Query: 112 SYYSGKN 118
S K
Sbjct: 121 PARSDKE 127
>gi|229917457|ref|YP_002886103.1| ribonuclease P [Exiguobacterium sp. AT1b]
gi|259494107|sp|C4KZZ5|RNPA_EXISA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229468886|gb|ACQ70658.1| ribonuclease P protein component [Exiguobacterium sp. AT1b]
Length = 114
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F V + G F + L RVG +V+KK G AVERNR
Sbjct: 1 MKKEYRLQKNEEFQAVFREGRSVANRQFVVYTLK--ADQTHFRVGLSVSKKLGNAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
M+R ++E++RL V + DYV+IA++ A + E+ +R K G+
Sbjct: 59 MKRLMRESLRLLEPNVAPN--DYVIIARKPATALTQSEVTESLKHVFKRAKVWQKQGR 114
>gi|239832644|ref|ZP_04680973.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
gi|239824911|gb|EEQ96479.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
Length = 179
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G A
Sbjct: 43 KQILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQAARIGDKPRAGFTVTKKNGNA 102
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 103 VIRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRG 162
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 163 DGKRRTERP 171
>gi|205371914|ref|ZP_03224734.1| ribonuclease P [Bacillus coahuilensis m4-4]
Length = 118
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F + KGE F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKEQRVKKNREFQEIFNKGESFANRQFVIYKLQTQGEDPY-RLGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++++ L + +K G+DYV+IA++ A F E + ++R K
Sbjct: 60 IKRYIRQSF-LELKDEIKPGYDYVIIARKPAADFTFFETKSSLTHVMKRADVLKRKEK 116
>gi|282881773|ref|ZP_06290431.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
gi|281298383|gb|EFA90821.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
Length = 112
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V K + + NN N + R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYKAKKISSCRYITLFTKKNNLN-IARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRR K R + K G+DYV +AK+DA+ FK+L F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKDAVDCDFKDLKKDFLNVLKRQRK 109
>gi|228924232|ref|ZP_04087503.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835450|gb|EEM80820.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 119
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQAI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|56965877|ref|YP_177611.1| ribonuclease P [Bacillus clausii KSM-K16]
gi|60390295|sp|Q5WAG0|RNPA_BACSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56912123|dbj|BAD66651.1| ribonuclease P protein component [Bacillus clausii KSM-K16]
Length = 122
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F+ V KKG F L VL + L R+G +V+K+ G AV RNR
Sbjct: 1 MKKEQRIKKNREFSAVFKKGSSMANRQFVLYVLPKEGQDRL-RLGLSVSKRVGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ A EG L+ DYV+IA+ A + FKE+ + +++ K
Sbjct: 60 IKRLVRAAFHE-LEGQLRPDCDYVVIARNPARDLSFKEVRSSLEHVMKKAK 109
>gi|229164438|ref|ZP_04292366.1| Ribonuclease P protein component [Bacillus cereus R309803]
gi|228619043|gb|EEK75941.1| Ribonuclease P protein component [Bacillus cereus R309803]
Length = 119
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQTVFQKGKSNANRQFVVYQL-NKEEQPYFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQAI-IELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|229014653|ref|ZP_04171767.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
gi|229065146|ref|ZP_04200439.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|229136312|ref|ZP_04265059.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|229170190|ref|ZP_04297876.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228613291|gb|EEK70430.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228647184|gb|EEL03272.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|228716175|gb|EEL67894.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|228746664|gb|EEL96553.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
Length = 119
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYKLDKEKQ-PHFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 116
>gi|229035145|ref|ZP_04189091.1| Ribonuclease P protein component [Bacillus cereus AH1271]
gi|228728211|gb|EEL79241.1| Ribonuclease P protein component [Bacillus cereus AH1271]
Length = 119
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKTHRIKKNDEFQTVFQKGKSNANRQLVVYQLDKAEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 116
>gi|319406775|emb|CBI80408.1| ribonuclease P protein component [Bartonella sp. 1-1C]
Length = 105
Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+ GE R+GP F LE+ + L RVGFTVT+K G AV+RNR++RRL+EAV
Sbjct: 1 MAARTGEKRRGPLFLLEIKPREQTAKTKAPLTARVGFTVTRKNGNAVQRNRIKRRLREAV 60
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R+ ++ G DYV+I R+ L +PF L + R+RR +
Sbjct: 61 RVGLVNEMEAGTDYVIIGHRNVLHVPFTSLISELSRRIRRKTQRQ 105
>gi|65317468|ref|ZP_00390427.1| COG0594: RNase P protein component [Bacillus anthracis str. A2012]
gi|118480514|ref|YP_897665.1| ribonuclease P [Bacillus thuringiensis str. Al Hakam]
gi|228918099|ref|ZP_04081627.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930493|ref|ZP_04093493.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936767|ref|ZP_04099558.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949209|ref|ZP_04111477.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094598|ref|ZP_04225665.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|229124990|ref|ZP_04254164.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|229187716|ref|ZP_04314852.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|118419739|gb|ABK88158.1| ribonuclease P protein component [Bacillus thuringiensis str. Al
Hakam]
gi|228595784|gb|EEK53468.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|228658491|gb|EEL14157.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|228688845|gb|EEL42676.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|228810492|gb|EEM56845.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822976|gb|EEM68817.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829212|gb|EEM74849.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841579|gb|EEM86695.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 123
Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIKSSVR 122
>gi|170761125|ref|YP_001788989.1| ribonuclease P [Clostridium botulinum A3 str. Loch Maree]
gi|238688510|sp|B1KUB6|RNPA_CLOBM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169408114|gb|ACA56525.1| ribonuclease P protein component [Clostridium botulinum A3 str.
Loch Maree]
Length = 111
Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++K ++F V ++G+ L + N + + R+G +V+KK G +V RNR++R +K
Sbjct: 6 IRKNKEFRHVYRRGKSYSNRLLVLYICKNRCN--INRLGVSVSKKVGKSVTRNRVKRLIK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 64 ESYRLNLDKDMKQGYDLVFIARNSSNDKDYKDIESALINLLKKA 107
>gi|319403769|emb|CBI77353.1| ribonuclease P protein component [Bartonella rochalimae ATCC
BAA-1498]
Length = 105
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+ GE R+GP F LE+ L RVGF VT+K G AV+RNR++RRL+EAV
Sbjct: 1 MAARTGEKRRGPLFLLEIKPREQTAKTKGPLTARVGFAVTRKNGNAVQRNRIKRRLREAV 60
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R+ ++ G DYV+I R+ L PF L N R++R +
Sbjct: 61 RVGLVNEMEAGTDYVIIGHRNVLHAPFTSLINELSRRIKRKTQRQ 105
>gi|226326144|ref|ZP_03801662.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
gi|225205686|gb|EEG88040.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
Length = 114
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V +KG+ + + +L N+ RVG +V+KK G ++ R+
Sbjct: 1 MKFSESLKKNRDFQSVYRKGKPYGNKYLVMYLLANDLGR--NRVGISVSKKVGNSIIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A + E+ + +
Sbjct: 59 LTRLIRESYRLH-EEQFQCGYDIVIIARTTAKDRSYHEIESALIHL 103
>gi|114798810|ref|YP_759143.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
gi|114738984|gb|ABI77109.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
Length = 121
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVG--FTVTKKQGCAVERN 58
M + L++RR+F V+ G + ++ VG +T TKK G AVERN
Sbjct: 8 MPEVRRLRRRREFTYVRDGVTERRKTLVVQARARPGEAPGEHVGEGYTATKKVGGAVERN 67
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R +RRL+EA R G DYV IA+ L + L + + R+
Sbjct: 68 RAKRRLREASRRLLAQYGLPGWDYVFIAREATLDTGWARLLDDMESALISLART 121
>gi|167766866|ref|ZP_02438919.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|317499292|ref|ZP_07957565.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711414|gb|EDS21993.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|291558406|emb|CBL37206.1| ribonuclease P protein component [butyrate-producing bacterium
SSC/2]
gi|316893461|gb|EFV15670.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
Length = 112
Score = 95.3 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N L+ R+F +V G + + L N+ R+G +V+KK G +V R+R
Sbjct: 1 MKNYHSLRNNREFQMVYNEGNSKANRYLVLYYRKNDLE--YNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R ++E+ RL + LK G+D V+IA++ A + + + F+ +
Sbjct: 59 TTRLIRESYRLNQDN-LKTGYDMVVIARQTAKGQNYHTIESAFLHLID 105
>gi|169334990|ref|ZP_02862183.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
gi|169257728|gb|EDS71694.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
Length = 121
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 4 ICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK F V + L N R+GF+++KK G AV RN+++R
Sbjct: 1 MQRLKKSIDFKKVYNNKKSIANRHLVFYTLKTENE---SRIGFSISKKVGNAVIRNKIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RL+E RL A +K G+D + I + A I + L N F+ V++
Sbjct: 58 RLREISRLNA-YQIKDGYDIICIVRVYAKDIDYNTLNNSFLHLVKKA 103
>gi|240145744|ref|ZP_04744345.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|257202160|gb|EEV00445.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|291536992|emb|CBL10104.1| ribonuclease P protein component [Roseburia intestinalis M50/1]
gi|291539804|emb|CBL12915.1| ribonuclease P protein component [Roseburia intestinalis XB6B4]
Length = 112
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V + G+ + + VL N+ R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNSDFQKVYRQGKSYANRYLVMYVLENHTEG--NRLGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + +G D V+IA+ A I + E + +
Sbjct: 59 LTRLIRESYRLH-EDMFNNGLDIVVIARSTARDISYHETESALLHL 103
>gi|187777369|ref|ZP_02993842.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
gi|187774297|gb|EDU38099.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
Length = 111
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++K ++F V ++G+ L + N + + R+G +V+KK G +V RNR++R +K
Sbjct: 6 IRKNKEFRHVYRRGKSYSNRLLVLYICKNRCN--INRLGVSVSKKVGKSVIRNRVKRLIK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E+ RL + +K G+D V IA+ + +K++ N + +++
Sbjct: 64 ESYRLNLDENMKKGYDLVFIARNSSNDKDYKDIENALINLLKKA 107
>gi|254488787|ref|ZP_05101992.1| ribonuclease P protein component [Roseobacter sp. GAI101]
gi|214045656|gb|EEB86294.1| ribonuclease P protein component [Roseobacter sp. GAI101]
Length = 95
Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 22 RKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
P F L++ RVGFT +KK G AV RNR +RRL+E RL G
Sbjct: 1 MAMPGFILQMRKRAEGEADGIRVGFTCSKKVGNAVARNRAKRRLREVARLALPDQGVDGM 60
Query: 81 DYVLIAKRDALF-IPFKELCNHFVERV 106
DYVL+ ++ + +PF +L + F + +
Sbjct: 61 DYVLVGRQGSTAILPFCQLQDDFAKAL 87
>gi|323487689|ref|ZP_08092947.1| ribonuclease P [Planococcus donghaensis MPA1U2]
gi|323398423|gb|EGA91211.1| ribonuclease P [Planococcus donghaensis MPA1U2]
Length = 113
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ +KK ++F + KKG+ F + VL N RVG +V+KK G AV RNR
Sbjct: 1 MNKDQRIKKNKEFQHIFKKGKSFANRQFIVYVLKNEQPEF--RVGLSVSKKVGNAVARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ L + L DY++IA+ A + F E ++
Sbjct: 59 IKRYIRQTF-LELKDDLLPNADYIIIARPQAATLDFHESKKSLEHVLK 105
>gi|228988716|ref|ZP_04148801.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229159047|ref|ZP_04287103.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|229199689|ref|ZP_04326332.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228583784|gb|EEK41959.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228624466|gb|EEK81237.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|228771028|gb|EEM19509.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 119
Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|331268190|ref|YP_004394682.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
gi|329124740|gb|AEB74685.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
Length = 113
Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V ++G+ L V NNN+ R+G +V+KK G +V R+R
Sbjct: 1 MKKHEKIRKNIEFRRVYRRGKSYSNGLLVLYVFKNNNNVDKSRIGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL +K G+D V +A+ ++ F E+ + + ++R
Sbjct: 61 VKRLISESYRLNNTN-VKIGYDLVFVARVNSKDKSFSEIESSLINLLKRA 109
>gi|206975830|ref|ZP_03236741.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217962979|ref|YP_002341557.1| ribonuclease P [Bacillus cereus AH187]
gi|226736855|sp|B7HZH3|RNPA_BACC7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206745924|gb|EDZ57320.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217063398|gb|ACJ77648.1| ribonuclease P protein component [Bacillus cereus AH187]
gi|324329438|gb|ADY24698.1| ribonuclease P [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 115
Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 112
>gi|75765125|ref|ZP_00744402.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228905431|ref|ZP_04069386.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
gi|228911327|ref|ZP_04075131.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228942636|ref|ZP_04105168.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955737|ref|ZP_04117732.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228968639|ref|ZP_04129622.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228975566|ref|ZP_04136118.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982202|ref|ZP_04142491.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|229072952|ref|ZP_04206148.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|74487388|gb|EAO51327.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228710198|gb|EEL62176.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|228777554|gb|EEM25832.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|228784176|gb|EEM32203.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791068|gb|EEM38686.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228803965|gb|EEM50589.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817062|gb|EEM63155.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228848345|gb|EEM93195.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228854251|gb|EEM98954.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
Length = 119
Score = 94.5 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|210614345|ref|ZP_03290164.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
gi|210150689|gb|EEA81698.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
Length = 116
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK + F +V +KG+ + + + N + R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNKDFQIVYRKGQSYANKYLVMYIYQNQSER--NRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
E+ RL E ++G D V+IA+ A +KE+ + +
Sbjct: 65 ESYRL-QEDKFQNGLDIVIIARAGAKGRTYKEIESALIHL 103
>gi|163814990|ref|ZP_02206377.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
gi|158449673|gb|EDP26668.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
Length = 155
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS + LK R+F V + + + +N R+G +V+KK G +V R+R
Sbjct: 43 MSKVISLKNSREFGSVYNTRNSVANKYLVMYLRSNGLD--YNRLGISVSKKVGNSVVRHR 100
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++EA RL + G+D V++A+ + +++ + +
Sbjct: 101 VTRLIREAYRLNRAN-IDVGYDIVIVARPASKDKKCQDIESALMHL 145
>gi|42784683|ref|NP_981930.1| ribonuclease P [Bacillus cereus ATCC 10987]
gi|67461466|sp|Q72WU0|RNPA_BACC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|42740615|gb|AAS44538.1| ribonuclease P protein component [Bacillus cereus ATCC 10987]
Length = 115
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 112
>gi|30023511|ref|NP_835142.1| ribonuclease P [Bacillus cereus ATCC 14579]
gi|228961751|ref|ZP_04123354.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229051156|ref|ZP_04194700.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|229112900|ref|ZP_04242431.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|229130733|ref|ZP_04259686.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|229153646|ref|ZP_04281822.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|229193738|ref|ZP_04320679.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|48474373|sp|Q814F3|RNPA_BACCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29899072|gb|AAP12343.1| Ribonuclease P protein component [Bacillus cereus ATCC 14579]
gi|228589763|gb|EEK47641.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|228629832|gb|EEK86485.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|228652750|gb|EEL08635.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|228670579|gb|EEL25892.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|228722219|gb|EEL73620.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|228797945|gb|EEM44955.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 119
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAI-TELKDEIASGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|332800546|ref|YP_004462045.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
gi|332698281|gb|AEE92738.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
Length = 123
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L K +F V K G PFF++ N R+G +V+KK G +V RN+
Sbjct: 1 MRKSLRLTKNLEFINVYKSGRRFTNPFFTMYAKKNELG--YSRLGVSVSKKVGNSVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+KE R+ + +K G D V K A + + + + ++R +
Sbjct: 59 IKRRIKEIFRINYD-FIKDGWDIVFSVKPPAAKLDYGSIEREIITLLKRGR 108
>gi|229148037|ref|ZP_04276376.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
gi|228635462|gb|EEK91953.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
Length = 119
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + G+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQNGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAI-TELKDEIASGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|319780383|ref|YP_004139859.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166271|gb|ADV09809.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 117
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
N L KR +F V++GE R+G F +EVL+ + L PRVG+TVTKK G AV RNR+R
Sbjct: 10 PNPKRLLKRAEFLAVRRGEKRRGRLFLVEVLDRGDG-LSPRVGYTVTKKVGNAVVRNRVR 68
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RRL+EAVR A + G+DYV++ + D L PF +L R+R +
Sbjct: 69 RRLREAVRTHAASDMAPGNDYVIVGREDVLTTPFGQLKAELSRRLRGTR 117
>gi|229176163|ref|ZP_04303655.1| Ribonuclease P protein component [Bacillus cereus MM3]
gi|228607322|gb|EEK64652.1| Ribonuclease P protein component [Bacillus cereus MM3]
Length = 119
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKYRIKKNDEFQTVFQKGKSNANRQLVVYQLDKGEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 116
>gi|116874194|ref|YP_850975.1| ribonuclease P [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466740|sp|A0AMG4|RNPA_LISW6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116743072|emb|CAK22196.1| ribonuclease P protein component [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 119
Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L SN R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELEDQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|163943167|ref|YP_001648051.1| ribonuclease P [Bacillus weihenstephanensis KBAB4]
gi|226741385|sp|A9VTM3|RNPA_BACWK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163865364|gb|ABY46423.1| ribonuclease P protein component [Bacillus weihenstephanensis
KBAB4]
Length = 115
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYKLDKEKQ-PHFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 112
>gi|169830201|ref|YP_001700359.1| ribonuclease P [Lysinibacillus sphaericus C3-41]
gi|168994689|gb|ACA42229.1| Ribonuclease P protein component [Lysinibacillus sphaericus C3-41]
Length = 117
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KKG+ F + L RVG +V+KK G AV+RN+
Sbjct: 4 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFLEKEGQTEF-RVGLSVSKKLGNAVKRNQ 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R ++ ++ L + LK DYV+IA++ A + F E+ ++ K
Sbjct: 63 IKRYIRHSI-LDLKDDLKPNMDYVIIARQPAATMDFHEVKQSLQHVLKIAKVLRK 116
>gi|148381584|ref|YP_001256125.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
3502]
gi|153932824|ref|YP_001385961.1| ribonuclease P [Clostridium botulinum A str. ATCC 19397]
gi|153934757|ref|YP_001389368.1| ribonuclease P [Clostridium botulinum A str. Hall]
gi|153939463|ref|YP_001393003.1| ribonuclease P [Clostridium botulinum F str. Langeland]
gi|168181114|ref|ZP_02615778.1| ribonuclease P protein component [Clostridium botulinum NCTC 2916]
gi|170754447|ref|YP_001783282.1| ribonuclease P [Clostridium botulinum B1 str. Okra]
gi|226951099|ref|YP_002806190.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|166226712|sp|A7FPL5|RNPA_CLOB1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226713|sp|A5I820|RNPA_CLOBH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226714|sp|A7GJP3|RNPA_CLOBL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890165|sp|B1IHS3|RNPA_CLOBK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808060|sp|C1FP35|RNPA_CLOBJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148291068|emb|CAL85205.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
3502]
gi|152928868|gb|ABS34368.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
19397]
gi|152930671|gb|ABS36170.1| ribonuclease P protein component [Clostridium botulinum A str.
Hall]
gi|152935359|gb|ABS40857.1| ribonuclease P protein component [Clostridium botulinum F str.
Langeland]
gi|169119659|gb|ACA43495.1| ribonuclease P protein component [Clostridium botulinum B1 str.
Okra]
gi|182668109|gb|EDT80088.1| ribonuclease P protein component [Clostridium botulinum NCTC 2916]
gi|226841638|gb|ACO84304.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|322807971|emb|CBZ05546.1| ribonuclease P protein component [Clostridium botulinum H04402 065]
Length = 111
Score = 94.1 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++K ++F V ++G+ L + N + + R+G +V+KK G +V RNR++R +K
Sbjct: 6 IRKNKEFRHVYRRGKSYSNRLLVLYICKNRCN--INRLGVSVSKKVGKSVIRNRVKRLIK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 64 ESYRLNLDENMKKGYDLVFIARNSSNDRDYKDIESALINLLKKA 107
>gi|331086953|ref|ZP_08336029.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409614|gb|EGG89053.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 111
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNQDFQIVYKTGKSYANKYLVMYV--RENQSRGNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A ++E+ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQSGYDIVVIARVSANGRSYREMESALIHL 103
>gi|229099914|ref|ZP_04230837.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
gi|229118977|ref|ZP_04248322.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228664502|gb|EEL19998.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228683529|gb|EEL37484.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
Length = 119
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQEVFQKGKSNANRQFVVYQL-NKEEQPNFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRS 112
>gi|260437687|ref|ZP_05791503.1| ribonuclease P protein component [Butyrivibrio crossotus DSM 2876]
gi|292809913|gb|EFF69118.1| ribonuclease P protein component [Butyrivibrio crossotus DSM 2876]
Length = 112
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LK F V K G + + VL N NL R+G +V+KK G ++ R+R
Sbjct: 1 MNGYESLKSNMNFQNVYKNGVSYANKYLVMYVLENRTDNL--RLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+VRL + +LK G+D V+IA+ + + + + + +R +K
Sbjct: 59 LTRLIRESVRLNSGSILK-GYDIVIIARANLKGKNYADTESALLHLLRLHK 108
>gi|58617328|ref|YP_196527.1| hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
gi|58416940|emb|CAI28053.1| Hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
Length = 122
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPF-FSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
++ I +KKR F + G F L+V+ + + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR + + G+ Y+LIA +D I F+++ + +
Sbjct: 63 RNKVKRRFRVLAESVMVQHARKGYYYILIASKDTPKISFQDMLSRLASYL 112
>gi|220933192|ref|YP_002510100.1| ribonuclease P protein component [Halothermothrix orenii H 168]
gi|219994502|gb|ACL71105.1| ribonuclease P protein component [Halothermothrix orenii H 168]
Length = 121
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 9 KRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
K F V KG+ + L NN R+GF+++K+ G AV RN++RRRLKE
Sbjct: 15 KNSDFKRVYSKGKSLASRYLVLYYYPNNLD--KNRIGFSISKRVGKAVVRNKLRRRLKEI 72
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RL +K G+D V I ++ ++ + + +L + ++R +
Sbjct: 73 IRLT--DNIKSGYDLVFIGRKPSVSLDYHDLKKDVHQLLKRAR 113
>gi|57239308|ref|YP_180444.1| hypothetical protein Erum5800 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579274|ref|YP_197486.1| hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161387|emb|CAH58311.1| putative ribonuclease P protein component [Ehrlichia ruminantium
str. Welgevonden]
gi|58417900|emb|CAI27104.1| Hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
Length = 122
Score = 94.1 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPF-FSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
++ I +KKR F + G F L+V+ + + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR + + G+ Y+LIA +D I F+++ + +
Sbjct: 63 RNKVKRRFRVLAESVIVQHARKGYYYILIASKDTPKISFQDMLSRLASYL 112
>gi|168334922|ref|ZP_02693042.1| ribonuclease P protein component [Epulopiscium sp. 'N.t. morphotype
B']
Length = 111
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F V KG+ L NN R+G +V+KK G +V R+R
Sbjct: 1 MKTTEKLRKNTEFKKVYAKGKSYANKELVLYKFKNNVQ--CNRLGISVSKKVGNSVTRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ R ++E RL E ++ G D V+IA+ + F E+ N + ++R
Sbjct: 59 VTRLIRENFRLNEENLVLVGFDIVIIAREASSTKNFYEIKNSLYKLLKRQ 108
>gi|30265505|ref|NP_847882.1| ribonuclease P [Bacillus anthracis str. Ames]
gi|47531074|ref|YP_022423.1| ribonuclease P [Bacillus anthracis str. 'Ames Ancestor']
gi|49188324|ref|YP_031577.1| ribonuclease P [Bacillus anthracis str. Sterne]
gi|49481129|ref|YP_039477.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52145295|ref|YP_086752.1| ribonuclease P [Bacillus cereus E33L]
gi|165873026|ref|ZP_02217647.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167635105|ref|ZP_02393422.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|167641750|ref|ZP_02399993.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|170689468|ref|ZP_02880658.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|170707583|ref|ZP_02898036.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|177655269|ref|ZP_02936823.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190569286|ref|ZP_03022180.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|196036129|ref|ZP_03103529.1| ribonuclease P protein component [Bacillus cereus W]
gi|196041981|ref|ZP_03109268.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|196045476|ref|ZP_03112707.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|218906679|ref|YP_002454513.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227818256|ref|YP_002818265.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229603026|ref|YP_002869696.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|254687072|ref|ZP_05150930.1| ribonuclease P [Bacillus anthracis str. CNEVA-9066]
gi|254724145|ref|ZP_05185930.1| ribonuclease P [Bacillus anthracis str. A1055]
gi|254735162|ref|ZP_05192872.1| ribonuclease P [Bacillus anthracis str. Western North America
USA6153]
gi|254742129|ref|ZP_05199816.1| ribonuclease P [Bacillus anthracis str. Kruger B]
gi|254755961|ref|ZP_05207993.1| ribonuclease P [Bacillus anthracis str. Vollum]
gi|254761359|ref|ZP_05213381.1| ribonuclease P [Bacillus anthracis str. Australia 94]
gi|301056961|ref|YP_003795172.1| ribonuclease P [Bacillus anthracis CI]
gi|47606464|sp|Q81JH0|RNPA_BACAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390323|sp|Q630B5|RNPA_BACCZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390442|sp|Q6HAE9|RNPA_BACHK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736852|sp|B7JIL4|RNPA_BACC0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808042|sp|C3P3F8|RNPA_BACAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808043|sp|C3LGU4|RNPA_BACAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30260183|gb|AAP29368.1| ribonuclease P protein component [Bacillus anthracis str. Ames]
gi|47506222|gb|AAT34898.1| ribonuclease P protein component [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182251|gb|AAT57627.1| ribonuclease P protein component [Bacillus anthracis str. Sterne]
gi|49332685|gb|AAT63331.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51978764|gb|AAU20314.1| ribonuclease P [Bacillus cereus E33L]
gi|164711238|gb|EDR16794.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167510304|gb|EDR85707.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|167529579|gb|EDR92329.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|170127579|gb|EDS96453.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|170666570|gb|EDT17343.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|172080196|gb|EDT65288.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190559593|gb|EDV13584.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|195991296|gb|EDX55264.1| ribonuclease P protein component [Bacillus cereus W]
gi|196023683|gb|EDX62359.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|196027236|gb|EDX65856.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|218535691|gb|ACK88089.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227007422|gb|ACP17165.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229267434|gb|ACQ49071.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|300379130|gb|ADK08034.1| ribonuclease P [Bacillus cereus biovar anthracis str. CI]
Length = 119
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIKSSVR 118
>gi|52788050|ref|YP_093879.1| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52350552|gb|AAU43186.1| RnpA [Bacillus licheniformis ATCC 14580]
Length = 134
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 16 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 74
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 75 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 133
Query: 120 S 120
S
Sbjct: 134 S 134
>gi|134301156|ref|YP_001114652.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
gi|172044354|sp|A4J9S4|RNPA_DESRM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134053856|gb|ABO51827.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
Length = 113
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V + G + L N L R GF+++KK G AV RNR
Sbjct: 1 MKKFVSLKKNSDFRNVYRFGVSAANRYLVLYKFPNK--GLGRRFGFSISKKVGKAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+RR LKE R + D+V I ++ + F ++ H + +
Sbjct: 59 LRRILKELCRFHLDRF-SDDCDFVFIVRQTSSDQDFHQMEKHMWHVWGKLNKQEK 112
>gi|229106082|ref|ZP_04236694.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
gi|228677337|gb|EEL31602.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
Length = 119
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQEVFQKGKSNANRQFVVYQL-NKEEQPNFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|322381371|ref|ZP_08055374.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154947|gb|EFX47218.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 116
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR F V + G+ F L L R+G +++KK G AV RNR
Sbjct: 1 MEKKYRLAKREDFHKVYRYGKSVANHQFVLYYLPKTGQGEF-RLGLSISKKVGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR +KE VRL + + G+DY++I ++ + +KEL R+
Sbjct: 60 LRRVIKEIVRLNIDR-ITGGYDYIIIVRKPCAEMNYKELEKSLFHVFRKA 108
>gi|300118811|ref|ZP_07056531.1| ribonuclease P [Bacillus cereus SJ1]
gi|298723779|gb|EFI64501.1| ribonuclease P [Bacillus cereus SJ1]
Length = 115
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQKVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKR 112
>gi|164686448|ref|ZP_02210476.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
gi|164604459|gb|EDQ97924.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
Length = 114
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+K F V K G+ + + ++ NN RVG +V+KK G A+ RN+++RR+
Sbjct: 8 RLRKDSDFRRVYKHGKSFANRYLVMYIMRNNLE--YNRVGISVSKKVGKAIVRNKVKRRI 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+E+ RL + +K G+D V IA+ + + E+ V + K
Sbjct: 66 RESFRLDVDKKIKSGYDIVFIARVAISDMQYNEINKSMKHLVNKFK 111
>gi|16804892|ref|NP_466377.1| ribonuclease P [Listeria monocytogenes EGD-e]
gi|46909043|ref|YP_015432.1| ribonuclease P [Listeria monocytogenes serotype 4b str. F2365]
gi|47093224|ref|ZP_00230997.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|47097240|ref|ZP_00234802.1| ribonuclease P protein component [Listeria monocytogenes str. 1/2a
F6854]
gi|224503079|ref|ZP_03671386.1| ribonuclease P [Listeria monocytogenes FSL R2-561]
gi|226225404|ref|YP_002759511.1| ribonuclease P protein component [Listeria monocytogenes Clip81459]
gi|254824782|ref|ZP_05229783.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|254827422|ref|ZP_05232109.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|254899688|ref|ZP_05259612.1| ribonuclease P [Listeria monocytogenes J0161]
gi|254913109|ref|ZP_05263121.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|254930871|ref|ZP_05264230.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|255520072|ref|ZP_05387309.1| ribonuclease P [Listeria monocytogenes FSL J1-175]
gi|284800258|ref|YP_003412123.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284993443|ref|YP_003415211.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|300763387|ref|ZP_07073385.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|21263942|sp|Q8Y3I1|RNPA_LISMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390484|sp|Q71VQ7|RNPA_LISMF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494111|sp|C1L0I8|RNPA_LISMC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16412355|emb|CAD01068.1| ribonuclease P protein component [Listeria monocytogenes EGD-e]
gi|46882316|gb|AAT05609.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. F2365]
gi|47014395|gb|EAL05366.1| ribonuclease P protein component [Listeria monocytogenes str. 1/2a
F6854]
gi|47018418|gb|EAL09178.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|225877866|emb|CAS06581.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258599800|gb|EEW13125.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|284055820|gb|ADB66761.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284058910|gb|ADB69849.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|293582416|gb|EFF94448.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|293591111|gb|EFF99445.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|293594021|gb|EFG01782.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|300515664|gb|EFK42713.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|332313284|gb|EGJ26379.1| Ribonuclease P protein component [Listeria monocytogenes str. Scott
A]
Length = 119
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L SN R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|325265445|ref|ZP_08132168.1| ribonuclease P protein component [Clostridium sp. D5]
gi|324029303|gb|EGB90595.1| ribonuclease P protein component [Clostridium sp. D5]
Length = 113
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G + + V+ N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQIVYKNGRSYANKYLVMYVMENGLD--KNRLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-LEEHFQSGLDIVVIARVSAKEKKYHDIGSALIHL 103
>gi|229181733|ref|ZP_04309056.1| Ribonuclease P protein component [Bacillus cereus 172560W]
gi|228601766|gb|EEK59264.1| Ribonuclease P protein component [Bacillus cereus 172560W]
Length = 119
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 116
>gi|315273160|ref|ZP_07869207.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
gi|313616211|gb|EFR89289.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
Length = 119
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L SN R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELEHQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|13474028|ref|NP_105596.1| ribonuclease P [Mesorhizobium loti MAFF303099]
gi|22654079|sp|Q98D89|RNPA_RHILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14024780|dbj|BAB51382.1| ribonuclease P, protein component [Mesorhizobium loti MAFF303099]
Length = 110
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
N L KR +F V++GE R+G FF +EVL+ + +PRVG+TVTKK G AV RNR+RR
Sbjct: 4 NPKRLLKRAEFLAVRRGEKRRGRFFLVEVLDRGDGG-VPRVGYTVTKKVGNAVVRNRVRR 62
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RLKEAVR+ A + G+DYV++ + DAL PF +L R R +
Sbjct: 63 RLKEAVRVHAADDMVPGNDYVIVGRDDALRAPFGQLKAELSRRFRGTR 110
>gi|126651993|ref|ZP_01724185.1| ribonuclease P [Bacillus sp. B14905]
gi|126591262|gb|EAZ85371.1| ribonuclease P [Bacillus sp. B14905]
Length = 117
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KKG+ F + L+ RVG +V+KK G AV+RN+
Sbjct: 4 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFLSKEEQTEF-RVGLSVSKKLGNAVKRNQ 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ ++ L + LK DYV+IA++ A + F E+ ++ K
Sbjct: 63 IKRYIRHSI-LDLKDDLKTNMDYVIIARQPAATMDFHEVKQSLQHVLKIAK 112
>gi|315286679|ref|ZP_07872172.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
gi|313630900|gb|EFR98591.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
Length = 119
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGKDHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ E + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQTFHELEEQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|154503052|ref|ZP_02040112.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
gi|153796293|gb|EDN78713.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
Length = 111
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + L + N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQVVYKNGKSYANRYLVLYIRENGMD--KNRLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQCGFDLVVIARAGAKERSYHDIESALIHL 103
>gi|153811983|ref|ZP_01964651.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
gi|149831882|gb|EDM86968.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
Length = 119
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + + VL N +++ R+G +V+KK G +V R+R
Sbjct: 1 MKYSESLKKNRDFQQVYKRGTSKANRYLVMYVLPN--QHMMNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL E ++ D V+IA+ A ++E+ + F+ +++
Sbjct: 59 LTRLIRESYRLNEEKFDRN-LDIVVIARNSAKDRSYQEIESAFMNLAQKHA 108
>gi|47568686|ref|ZP_00239383.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|222098964|ref|YP_002533022.1| ribonuclease p [Bacillus cereus Q1]
gi|254808045|sp|B9IT45|RNPA_BACCQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|47554674|gb|EAL13028.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|221243023|gb|ACM15733.1| ribonuclease P protein component [Bacillus cereus Q1]
Length = 115
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 112
>gi|63259067|gb|AAY40163.1| ribonuclease P protein [Pseudomonas syringae pv. syringae B728a]
Length = 123
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 5 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 64
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + S
Sbjct: 65 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 113
>gi|153008693|ref|YP_001369908.1| ribonuclease P [Ochrobactrum anthropi ATCC 49188]
gi|166226731|sp|A6WYM5|RNPA_OCHA4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151560581|gb|ABS14079.1| ribonuclease P protein component [Ochrobactrum anthropi ATCC 49188]
Length = 141
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-------PRVGFTVTKKQGCA 54
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQTAKIGEKPRAGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 65 VIRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRG 124
Query: 115 SGKNFSRKS 123
GK + +
Sbjct: 125 DGKRRTERP 133
>gi|289436081|ref|YP_003465953.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172325|emb|CBH28871.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|313635502|gb|EFS01737.1| ribonuclease P protein component [Listeria seeligeri FSL N1-067]
gi|313640129|gb|EFS04746.1| ribonuclease P protein component [Listeria seeligeri FSL S4-171]
Length = 119
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L + ++ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKHEGTDHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ EG + ++Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQTFHE-LEGQINPENEYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|225867468|ref|YP_002752846.1| ribonuclease P protein component [Bacillus cereus 03BB102]
gi|254808044|sp|C1ER80|RNPA_BACC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|225786123|gb|ACO26340.1| ribonuclease P protein component [Bacillus cereus 03BB102]
Length = 115
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKAEQ-PYFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMIRQSI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 112
>gi|218900628|ref|YP_002449039.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|226736853|sp|B7IST7|RNPA_BACC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218542981|gb|ACK95375.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|326943285|gb|AEA19181.1| ribonuclease P [Bacillus thuringiensis serovar chinensis CT-43]
Length = 115
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 112
>gi|290892035|ref|ZP_06555032.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
gi|290558629|gb|EFD92146.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
Length = 119
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L S R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEESTHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|328468320|gb|EGF39326.1| ribonuclease P [Listeria monocytogenes 1816]
Length = 120
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK F V ++G+ F + L SN R+G +V+KK G AV RNR++R +
Sbjct: 7 RIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYI 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++ + +Y++IA++ A + F E+ + ++
Sbjct: 66 RQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 107
>gi|218232085|ref|YP_002370262.1| ribonuclease P [Bacillus cereus B4264]
gi|296505915|ref|YP_003667615.1| ribonuclease P [Bacillus thuringiensis BMB171]
gi|226736854|sp|B7H7A5|RNPA_BACC4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218160042|gb|ACK60034.1| ribonuclease P protein component [Bacillus cereus B4264]
gi|296326967|gb|ADH09895.1| ribonuclease P [Bacillus thuringiensis BMB171]
Length = 115
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAI-TELKDEIASGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 112
>gi|306840924|ref|ZP_07473666.1| ribonuclease P protein component [Brucella sp. BO2]
gi|306289047|gb|EFM60309.1| ribonuclease P protein component [Brucella sp. BO2]
Length = 113
Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 27 FSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
F +EV PRVGFTVTKK G AV RNR+RRRLKEA+R A +
Sbjct: 2 FLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIRCHAGRDMAPS 61
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
DYV++A+ AL PF +L R++ GK + +
Sbjct: 62 TDYVIVAREQALNAPFSQLTEELSRRIKAKGERRSGGKRRTERP 105
>gi|217965937|ref|YP_002351615.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|254808069|sp|B8DCV5|RNPA_LISMH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|217335207|gb|ACK41001.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|307572446|emb|CAR85625.1| ribonuclease P protein component [Listeria monocytogenes L99]
gi|313611879|gb|EFR86334.1| ribonuclease P protein component [Listeria monocytogenes FSL
F2-208]
Length = 119
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L S R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSTHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|16802045|ref|NP_472313.1| ribonuclease P [Listeria innocua Clip11262]
gi|21263948|sp|Q926Q4|RNPA_LISIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16415527|emb|CAC98212.1| ribonuclease P protein component [Listeria innocua Clip11262]
gi|313621679|gb|EFR92462.1| ribonuclease P protein component [Listeria innocua FSL S4-378]
gi|313625810|gb|EFR95424.1| ribonuclease P protein component [Listeria innocua FSL J1-023]
Length = 119
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L ++ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEEASHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|73748804|ref|YP_308043.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|289432825|ref|YP_003462698.1| ribonuclease P protein component [Dehalococcoides sp. GT]
gi|123619804|sp|Q3ZY16|RNPA_DEHSC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|73660520|emb|CAI83127.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|288946545|gb|ADC74242.1| ribonuclease P protein component [Dehalococcoides sp. GT]
Length = 120
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V +G GP ++ L NN L RVGF V+KK G AVERNR
Sbjct: 1 MKQANRLTKREEYSQVLARGGTYIGPLAIMKTLPNNLE--LSRVGFIVSKKVGGAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 59 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 115
Query: 120 SRKS 123
S K+
Sbjct: 116 SFKT 119
>gi|170743185|ref|YP_001771840.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
gi|168197459|gb|ACA19406.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
Length = 138
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 3/124 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNR 59
I + +R + G + + R GFTVTKK G A ERNR
Sbjct: 6 PPIGRITRRPDYLAAATGRRFHTGRMTAQGRPRRAEEPATGLRFGFTVTKKTGHATERNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG-KN 118
+RRRLK A + D VLI +R+AL PF+ L N + + +G
Sbjct: 66 IRRRLKAAAAEIGPEHAERALDLVLIGRREALGAPFEVLVNDIRRALATVTKPKPAGQPG 125
Query: 119 FSRK 122
R+
Sbjct: 126 RPRR 129
>gi|255024428|ref|ZP_05296414.1| ribonuclease P [Listeria monocytogenes FSL J1-208]
Length = 121
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
I LKK F V ++G+ F + L S R+G +V+KK G AV RNR+
Sbjct: 4 KKIIELKKIDDFQKVFRRGKSFANRQFVVYTLKQEGSTHF-RIGLSVSKKIGNAVCRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 63 KRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 108
>gi|83950043|ref|ZP_00958776.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
gi|83837942|gb|EAP77238.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
Length = 87
Score = 92.6 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
++ N + + VGFT +KK G AV RNR +RRL+EA R + + G DYVLI K
Sbjct: 2 LVQARNRRDDDPAIGVGFTCSKKVGNAVARNRAKRRLREAARAVLPDLGRPGWDYVLIGK 61
Query: 88 -RDALFIPFKELCNHFVERVRRNKRS 112
D PF+ L + + RS
Sbjct: 62 AEDTAARPFEALKGDLAFALSKLHRS 87
>gi|300814762|ref|ZP_07095010.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511149|gb|EFK38401.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 112
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V + + + NN N + R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYRAKKISSCRYITLFTKKNNLN-IARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRR K R + K G+DYV +AK++A+ F + F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKEAVDCDFTDFKKDFLNVLKRQRK 109
>gi|225377583|ref|ZP_03754804.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans DSM
16841]
gi|225210559|gb|EEG92913.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans DSM
16841]
Length = 111
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G+ + + VL N+ R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNRDFQNVYKKGKSYANRYLVMYVLENDTDR--NRLGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + D V+IA+ A I + E+ + +
Sbjct: 59 VTRLIRESYRL-QEDMFNSSLDIVVIARNTAKDISYHEVESALLHL 103
>gi|254830710|ref|ZP_05235365.1| ribonuclease P [Listeria monocytogenes 10403S]
Length = 119
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V ++G+ F + L N R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGLNHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++++ + +Y++IA++ A + F E+ + ++
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 106
>gi|224498309|ref|ZP_03666658.1| ribonuclease P [Listeria monocytogenes Finland 1988]
gi|254991920|ref|ZP_05274110.1| ribonuclease P [Listeria monocytogenes FSL J2-064]
Length = 121
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK F V ++G+ F + L SN R+G +V+KK G AV RNR++R ++
Sbjct: 9 IKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++ + +Y++IA++ A + F E+ + ++
Sbjct: 68 QSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 108
>gi|168183725|ref|ZP_02618389.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|237797104|ref|YP_002864656.1| ribonuclease P [Clostridium botulinum Ba4 str. 657]
gi|259494101|sp|C3KWJ9|RNPA_CLOB6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|182673212|gb|EDT85173.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|229263703|gb|ACQ54736.1| ribonuclease P protein component [Clostridium botulinum Ba4 str.
657]
Length = 111
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++K ++F V ++G+ L V N + + R+G +V+KK G +V RN+++R +K
Sbjct: 6 IRKNKEFRHVYRRGKSYSNKLLVLYVCKNRYN--INRLGVSVSKKVGKSVVRNKVKRLIK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 64 ESYRLNLDKDMKRGYDLVFIARNSSNDKDYKDIESALINLLKKA 107
>gi|206970039|ref|ZP_03230992.1| ribonuclease P protein component [Bacillus cereus AH1134]
gi|206734616|gb|EDZ51785.1| ribonuclease P protein component [Bacillus cereus AH1134]
Length = 115
Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAI-TELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKR 112
>gi|253681259|ref|ZP_04862057.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
gi|253562497|gb|EES91948.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
Length = 113
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V ++G+ L V NNN+ R+G +V+KK G +V R+R
Sbjct: 1 MKKHEKIRKNIEFRRVYRRGKSYSNGLLVLYVFKNNNNLDKSRIGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL +K G+D V +A+ ++ F E+ + + ++R
Sbjct: 61 VKRLISESYRLNNTN-VKIGYDLVFVARVNSKDKRFSEIESSLINLLKRA 109
>gi|88607890|ref|YP_504920.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
gi|88598953|gb|ABD44423.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
Length = 120
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLL----PRVGFTVTKKQGCAV 55
+ + LKKR++FA + G K L+ +++ S RVGFTV+KK G AV
Sbjct: 3 LKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGNAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RNR++RRL+ A + G Y+LI+ R + EL V +RR
Sbjct: 63 VRNRIKRRLRVAAQNVIAKNAHRGFYYILISSRRLADVGMGELLYSLVTCLRR 115
>gi|299541767|ref|ZP_07052090.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
gi|298725505|gb|EFI66146.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
Length = 114
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KKG+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFLVKEGQTEF-RVGLSVSKKLGNAVTRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R +++++ + LK DYV+IA+ A + F E+ +R K
Sbjct: 60 VKRYIRQSIHELKDD-LKPNMDYVIIARHPAATMDFHEVKQSLQHVLRIAK 109
>gi|254937490|ref|ZP_05269187.1| ribonuclease P protein component [Listeria monocytogenes F6900]
gi|258610092|gb|EEW22700.1| ribonuclease P protein component [Listeria monocytogenes F6900]
Length = 120
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK F V ++G+ F + L SN R+G +V+KK G AV RNR++R +
Sbjct: 7 RIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYI 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++ + +Y++IA++ A + F E+ + ++
Sbjct: 66 RQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 107
>gi|229829516|ref|ZP_04455585.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
gi|229791947|gb|EEP28061.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
Length = 120
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K R L V N+ R+G +V++K G +V R+ + R ++
Sbjct: 11 LKKNADFQKVYKEHNSRANRLLVLYVRANDLGR--NRLGISVSRKVGNSVVRHHLTRLIR 68
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
EA RL E + G D V++A++ A F ++ + F+ + R ++
Sbjct: 69 EAYRLH-EASFQIGWDMVVVARKQAGDADFHQMESAFLH-IARLQKLITEADQV 120
>gi|332186232|ref|ZP_08387977.1| ribonuclease P protein component [Sphingomonas sp. S17]
gi|332013600|gb|EGI55660.1| ribonuclease P protein component [Sphingomonas sp. S17]
Length = 113
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFTVTKK G AV RNRM+RR++ R G D+VLI ++ + ++ L
Sbjct: 2 RVGFTVTKKIGNAVVRNRMKRRMRALARDLLPTKGITGADHVLIGRQGGIERDYQALTAE 61
Query: 102 FVERVRRNKRSYYSGKNFSRKS 123
+ + R + R+
Sbjct: 62 LAKALARAASPETAADQRPREP 83
>gi|326390365|ref|ZP_08211924.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
gi|325993642|gb|EGD52075.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
Length = 116
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ I +KK +F V G+ F + + NN RVG++V+KK G +V RNR+
Sbjct: 3 NKIIKIKKSYEFKKVYSNGKSVANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRNRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RR L E+ RL + +K G D + +A+ + F L N + + K Y+G
Sbjct: 61 RRLLHESFRL-LDIEIKTGFDIIFVARGKIVEADFHTLKNSMRKLI--MKTPLYAGNER 116
>gi|153815421|ref|ZP_01968089.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC 27756]
gi|317500883|ref|ZP_07959095.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089215|ref|ZP_08338117.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847280|gb|EDK24198.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC 27756]
gi|316897763|gb|EFV19822.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405767|gb|EGG85296.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
Length = 111
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + +L N R+G +V+KK G +V R+
Sbjct: 1 MKFSQSLKKNRDFQNVYKKGTSFANSYLVMYILENGLQE--NRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL +E + G D V+IA+ A + E+ + + + +K
Sbjct: 59 LTRLIRESYRL-SEEHFRCGIDIVVIARTSAKGRNYHEIESALIHLGKLHK 108
>gi|302390795|ref|YP_003826616.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
gi|302201423|gb|ADL08993.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
Length = 116
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L K +F V K R G P FS+ N R+G +V KK G +V RNR
Sbjct: 1 MKKCFRLTKNFEFMRVYKKGRRAGCPLFSMYAKENQLG--YSRLGISVRKKTGKSVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++RR++EA R E +K G+D V+ K DA F E+ + +++
Sbjct: 59 IKRRIREAFRTNMEN-VKKGYDIVVSVKEDAREADFNEIKRSLIYLLKK 106
>gi|295108625|emb|CBL22578.1| ribonuclease P protein component [Ruminococcus obeum A2-162]
Length = 120
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + + VL N ++ R+G +V+KK G +V R+R
Sbjct: 1 MKYSESLKKNRDFQQVYKRGTSKANRYLVMYVLPN--QHMKNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ R ++E+ RL E + K D V+IA+ A + E+ F++ R++
Sbjct: 59 ITRLVRESYRLN-ESLFKKNLDIVVIARNSANGTNYHEIEKAFMDLARKH 107
>gi|220930848|ref|YP_002507757.1| ribonuclease P [Clostridium cellulolyticum H10]
gi|220001176|gb|ACL77777.1| ribonuclease P protein component [Clostridium cellulolyticum H10]
Length = 121
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G ++ +L N S L R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRNITVYILPNKQS--LNRIGISVSKKAGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R E + +G+D V+ A+ + + F +++ +
Sbjct: 59 KKRLIRESYRY-FEEYISNGYDIVIAARAGESVPTYGVVLKEFKYLLKKLQ 108
>gi|312144703|ref|YP_003996149.1| ribonuclease P protein component [Halanaerobium sp. 'sapolanicus']
gi|311905354|gb|ADQ15795.1| ribonuclease P protein component [Halanaerobium sp. 'sapolanicus']
Length = 108
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F V G+ L VL + + G +V+KK G AV RN+++R
Sbjct: 1 MESLKKNKEFKKVYNNGKSYVSRNLVLYVLETPEKD-FNKYGLSVSKKVGNAVVRNKLKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++E +R + K +D V IA+ A+ + F+EL + ++
Sbjct: 60 RMREIIREFEKKGFKA-YDIVFIARNPAVELDFQELKRDIKKLYKKAA 106
>gi|319648517|ref|ZP_08002733.1| RnpA protein [Bacillus sp. BT1B_CT2]
gi|317389596|gb|EFV70407.1| RnpA protein [Bacillus sp. BT1B_CT2]
Length = 123
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 5 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 64 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 122
Query: 120 S 120
S
Sbjct: 123 S 123
>gi|291548770|emb|CBL25032.1| ribonuclease P protein component [Ruminococcus torques L2-14]
Length = 111
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V + G+ + ++ N + R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQSVYRNGKSFANKCLVMYIIPNELN--KNRLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL +E + G+D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-SEEHFRCGYDIVVIARTSAKDKNYHDVESALIHL 103
>gi|147669565|ref|YP_001214383.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
gi|146270513|gb|ABQ17505.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
Length = 126
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V +G G ++ L NN L RVGF V+KK G AVERNR
Sbjct: 7 MKQANRLTKREEYSQVLARGGTYIGSLAIMKTLPNNLE--LSRVGFIVSKKVGGAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 65 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 121
Query: 120 SRKS 123
S K+
Sbjct: 122 SFKT 125
>gi|237736111|ref|ZP_04566592.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
gi|229421822|gb|EEO36869.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
Length = 112
Score = 91.4 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK +F ++ + ++SL N++NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKNGEFQIIYNSGRKSFGYYSLIFFKKNDNNL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
R E LK G+D + +AK+ A + F ++ + ++ K
Sbjct: 63 YYRQNEES-LKDGYDIIFVAKKTAGEKFKFLKFGDIKKDLDKTLKNVK 109
>gi|259047908|ref|ZP_05738309.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
gi|259035442|gb|EEW36697.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
Length = 114
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V KG+ F + L N + RVG +V+KK G AV RNR
Sbjct: 1 MKKSYRVKKDREFQQVFHKGKSTANRQFVIYKL-NKEAQAHFRVGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++ + + + D+++IA+ + + ++E+ + + ++
Sbjct: 60 LKRRIRHILME-LDDQITQNADFIVIARSPIVQMSYQEMKSSMMHVLK 106
>gi|257470418|ref|ZP_05634509.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|317064626|ref|ZP_07929111.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|313690302|gb|EFS27137.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
Length = 116
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKKNEENL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRRNK 110
R E LK G+D + +AKR A + ++++ ++ ++ +K
Sbjct: 63 YYR-KFENQLKDGYDIIFVAKRTAGEKVKTLKYQDMEKDLMKVMKSSK 109
>gi|154688210|ref|YP_001423371.1| ribonuclease P [Bacillus amyloliquefaciens FZB42]
gi|166226700|sp|A7ZAW4|RNPA_BACA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|154354061|gb|ABS76140.1| RnpA [Bacillus amyloliquefaciens FZB42]
Length = 116
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K+G F L L+ L RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKRGTSMANRQFVLYTLDQPKQEEL-RVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++AV+ E L D+++IA++ A + F+E R+
Sbjct: 60 VKRLIRQAVQE--EKELLKPKDFIIIARKPAGDLSFEETKKSLQHLFRKT 107
>gi|154483921|ref|ZP_02026369.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
gi|149735412|gb|EDM51298.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
Length = 116
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
N LKK F V KG+ + + + V NN S + R+G +V+KK G +V R+ +
Sbjct: 5 KNYDSLKKNSDFQNVYVKGKSKANRYLVMYVAQNNLS--INRLGISVSKKVGNSVVRHHL 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R ++EA RL + + D V+IA+ A +KE+ + + +
Sbjct: 63 TRLIREAYRLNS-NMFNSSLDIVVIARNTAKDKTYKEVESALLHLAK 108
>gi|163119738|ref|YP_081442.3| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52005862|gb|AAU25804.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus licheniformis ATCC 14580]
Length = 119
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KKG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 60 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|182680229|ref|YP_001834375.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636112|gb|ACB96886.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 227
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 44/162 (27%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNN------------------------------ 35
++KRR F KG+ FSL+ +
Sbjct: 30 RIRKRRDFLRAAKGKRVHCEAFSLQSIPREPMDLPSKGQDGQDLEKENPTSKASANAAAL 89
Query: 36 -----NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV--------LKHGHDY 82
S L R GFTVT+K G AV+RNR+RRRLKEA+R A+ + K GHDY
Sbjct: 90 ASSSGPSGLPARFGFTVTRKTGHAVQRNRIRRRLKEALRHLADTLADPSADLPAKPGHDY 149
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKRSY-YSGKNFSRKS 123
V+IA+ AL +PF +L + + + ++ + + KS
Sbjct: 150 VIIARPAALAMPFCDLQATLRQALIKVDKAKIHKSETRKNKS 191
>gi|227873166|ref|ZP_03991457.1| ribonuclease P [Oribacterium sinus F0268]
gi|227840997|gb|EEJ51336.1| ribonuclease P [Oribacterium sinus F0268]
Length = 115
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K +F KKG+ +F + ++ N R+G + +KK G +V R+
Sbjct: 1 MKRFPSMKSNEEFQHCYKKGKSYANAYFVMLIVENGLD--YSRLGISCSKKVGNSVVRHG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ R+L+E RL +K G D VL+ ++ F + EL +++ R+
Sbjct: 59 ISRKLREIFRLH--KEIKEGLDIVLVVRQKVAFASYSELEIAYLDLCSRH 106
>gi|238926052|ref|YP_002939570.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|238877729|gb|ACR77436.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|291526548|emb|CBK92135.1| ribonuclease P protein component [Eubacterium rectale DSM 17629]
gi|291529191|emb|CBK94777.1| ribonuclease P protein component [Eubacterium rectale M104/1]
Length = 115
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V G + + VL NN N R+G +V+KK G +V R+
Sbjct: 1 MKFSDSLKKNKDFQNVYNNGVSFANRYLVMYVLKNNTEN--NRIGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A + +KE+ + +
Sbjct: 59 ITRLVRESYRLH-EDMFDSGLDIVVIARVAARHVGYKEIESAVLHL 103
>gi|28872713|ref|NP_795332.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968443|ref|ZP_03396586.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|301384269|ref|ZP_07232687.1| ribonuclease P [Pseudomonas syringae pv. tomato Max13]
gi|302063881|ref|ZP_07255422.1| ribonuclease P [Pseudomonas syringae pv. tomato K40]
gi|302131964|ref|ZP_07257954.1| ribonuclease P [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|38258464|sp|Q87TR9|RNPA_PSESM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28855969|gb|AAO59027.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926731|gb|EEB60283.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|331017729|gb|EGH97785.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 133
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + + S
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPTPEEKS 123
>gi|225181148|ref|ZP_03734594.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT 1]
gi|225168117|gb|EEG76922.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT 1]
Length = 112
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K ++ V + G+ L +L NN + R GF +KK G AV RNR
Sbjct: 1 MEKKGRITKNSEYQQVFQHGKSVASRGLVLIMLKNNANG--NRTGFITSKKIGNAVIRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L+E ++ A L G+D V +A+R A FK+ ++R
Sbjct: 59 VKRLLRETYKMYAAD-LATGYDLVFVARRPAAGFDFKQAAAEMRRVLQRG 107
>gi|326202770|ref|ZP_08192637.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
gi|325986847|gb|EGD47676.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
Length = 121
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G + ++ +L N S R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRYITVYILPNKQS--FNRIGISVSKKAGKAVIRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R E + +G D V+ A+ F+ + +++ +
Sbjct: 59 KKRLIRESYRY-FEDYISNGFDIVVAARSGESVPTFRAVLKEIKYLLKKLQ 108
>gi|226315532|ref|YP_002775428.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
gi|254808054|sp|C0ZA70|RNPA_BREBN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226098482|dbj|BAH46924.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
Length = 126
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK QF V ++G F L R G +V+KK G AV RNR
Sbjct: 1 MHRSHRLKKNEQFQAVFQRGSSAANKQFVLYSAKQEGQAAF-RAGISVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++EAV E + G D V+IA+ + + + + ++R K
Sbjct: 60 VKRLIREAVAR-MESDIPVGLDLVIIARPGVEAMTLEAIEQSLLHVMKRAK 109
>gi|330961503|gb|EGH61763.1| ribonuclease P [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 133
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPTPEEKP 123
>gi|253581089|ref|ZP_04858349.1| ribonuclease P [Ruminococcus sp. 5_1_39B_FAA]
gi|251847625|gb|EES75595.1| ribonuclease P [Ruminococcus sp. 5_1_39BFAA]
Length = 123
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V + G + + + VL N + R+G +V+KK G +V R+R
Sbjct: 1 MQRSESLKKNQDFQKVYRNGTSKGNRYLVMYVLKN--QYMKNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL E ++ D V++A+ A ++E+ + + ++
Sbjct: 59 LTRLIRESYRLN-EAEFENSLDIVVVARPQAKDRTYQEIESALMHLAGKHC 108
>gi|331104701|ref|ZP_04590127.2| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024525|gb|EGI04581.1| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 133
Score = 90.3 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPAPETKP 123
>gi|138897070|ref|YP_001127523.1| ribonuclease P [Geobacillus thermodenitrificans NG80-2]
gi|166226719|sp|A4ITX4|RNPA_GEOTN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134268583|gb|ABO68778.1| Ribonuclease P protein component [Geobacillus thermodenitrificans
NG80-2]
Length = 121
Score = 90.3 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V ++G F + L+ R+G +V+KK G AV RN+
Sbjct: 1 MKKKYRIKKNEEFQEVFRRGVSTANRQFVVYTLDRPEQ-PYFRIGLSVSKKLGKAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R +++ L + + G DYV+IA++ + + E+ + +R+ G+
Sbjct: 60 IKRYVRQCF-LELKEEVVPGKDYVIIARQPVAEMGYAEVKKSLLHVLRKAGGLKKRGRT 117
>gi|23100950|ref|NP_694417.1| ribonuclease P [Oceanobacillus iheyensis HTE831]
gi|29427757|sp|Q8EKU0|RNPA_OCEIH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|22779185|dbj|BAC15451.1| ribonuclease P protein component [Oceanobacillus iheyensis HTE831]
Length = 121
Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ +F KKG + + R+G +V KK G AV RNR
Sbjct: 1 MKKQYRIKQNEEFQYTFKKGHSFANRQLVIYYREKEDQCHF-RIGLSVGKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+++ +K +D V+IA+ + E+ + +
Sbjct: 60 IKRCLRQSFHELEPD-IKPAYDIVIIARNPTRNMNCGEIKKSLSHLLYK 107
>gi|320547571|ref|ZP_08041856.1| ribonuclease P protein component [Streptococcus equinus ATCC 9812]
gi|320447646|gb|EFW88404.1| ribonuclease P protein component [Streptococcus equinus ATCC 9812]
Length = 119
Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F L L N S RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGSSVANRKFVLYHLEKNQS--HYRVGLSVSKKLGNAVTRNN 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + ++ D+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVIMELSPNLINQ--DFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|23193193|gb|AAN14422.1|AF319579_3 RNase P [Bacillus weihenstephanensis]
Length = 105
Score = 90.3 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K F V +KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIIKNDSFQAVFQKGQSNANRQFVVYKLDKEKQ-PHFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R +++++ + + + G D+V+IA++ + ++EL +
Sbjct: 60 IKRMIRQSI-IELKDEIDSGKDFVIIARKPCAEMTYEELKKSLIHVF 105
>gi|158425678|ref|YP_001526970.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
gi|158332567|dbj|BAF90052.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
Length = 136
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ + L+KRR F + E P F L+ + ++ PR+GFTVTKK G AV RNRM
Sbjct: 5 LAVVDRLRKRRDFLAAARAERANVPSFLLQGRDRHD-EAEPRLGFTVTKKNGNAVVRNRM 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRL+EA RL + + G DYVL+A+ L PF+ L V R + + S
Sbjct: 64 RRRLREAARLVMPQLGRSGFDYVLVARGPCLDAPFQTLVRDMERAVSRLHAAKKAKTPTS 123
Query: 121 RKS 123
+
Sbjct: 124 KTP 126
>gi|172059051|ref|YP_001815511.1| ribonuclease P [Exiguobacterium sibiricum 255-15]
gi|229890167|sp|B1YGB0|RNPA_EXIS2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171991572|gb|ACB62494.1| ribonuclease P protein component [Exiguobacterium sibiricum 255-15]
Length = 116
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V +G F + L R+G +V+KK G AV RN+
Sbjct: 1 MKKEYRVKKDKEFQAVFTRGASVANRQFVVYALKKEQQTHF-RIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R ++EA +L E L +D+V+IA+ A + +E+ + +R+
Sbjct: 60 VKRYVREACQLH-EASLAPNYDFVIIARNPAAKMTAQEVADSLRHVFKRS 108
>gi|266620973|ref|ZP_06113908.1| ribonuclease P protein component [Clostridium hathewayi DSM 13479]
gi|288867394|gb|EFC99692.1| ribonuclease P protein component [Clostridium hathewayi DSM 13479]
Length = 115
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK R F V + G+ + V R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKNRDFQEVYQTGKSYANKLLVMYV--KKTDRPETRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL E + + G D V++A+ A + + + ++
Sbjct: 59 ITRLLRESFRLH-EDMTETGLDIVVVARAAAKEENYHSIESAYLHL 103
>gi|289422480|ref|ZP_06424323.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
gi|289157052|gb|EFD05674.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
Length = 117
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + + G+ + + N R+G +++KK G A RN++RR +K
Sbjct: 13 IKKDPEFRRIYRSGKSMADRNLVVYKMKNKKE--KSRIGISISKKVGKAHVRNKLRRYIK 70
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
EA RL + +K G+DY+ IA+ ++ + ++ ++ K
Sbjct: 71 EAYRLNIDPYVKGGYDYIFIARVNSSDASYHDIEKSIKYLAKKAK 115
>gi|225575688|ref|ZP_03784298.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
gi|225037092|gb|EEG47338.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
Length = 113
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F +V + G + + VL N R+G +V+KK G +V R+R+ R ++
Sbjct: 7 LKKNRDFQIVYRCGTSLANRYLVMYVLENELK--KNRLGISVSKKVGNSVVRHRLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
E RL E + G+D V+IA+ A +K++ +
Sbjct: 65 ECYRLN-ESRFQVGYDIVVIARVSAKDQNYKKIEQALLHL 103
>gi|225570323|ref|ZP_03779348.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
gi|225160855|gb|EEG73474.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNKDFQTVYNKGISYANKYLVMYVMENHTER--NRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +KE+ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHL 103
>gi|212640680|ref|YP_002317200.1| ribonuclease P [Anoxybacillus flavithermus WK1]
gi|226736851|sp|B7GMW3|RNPA_ANOFW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|212562160|gb|ACJ35215.1| RNase P protein component [Anoxybacillus flavithermus WK1]
Length = 112
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K+G F L VL+ L R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNEEFQEVFKRGTSVANRQFVLYVLDKPEQ-LYFRIGLSVSKKIGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++ + ++ G DYV+IA+ + ++E + +RR
Sbjct: 60 VKRYIRQVFHEERDR-IEIGKDYVIIARMPVATMEYEEAKKSLLHVLRRA 108
>gi|161486725|ref|YP_238201.2| ribonuclease P [Pseudomonas syringae pv. syringae B728a]
gi|257485601|ref|ZP_05639642.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289628216|ref|ZP_06461170.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289649106|ref|ZP_06480449.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 2250]
gi|289677546|ref|ZP_06498436.1| ribonuclease P [Pseudomonas syringae pv. syringae FF5]
gi|298484607|ref|ZP_07002712.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|302185838|ref|ZP_07262511.1| ribonuclease P [Pseudomonas syringae pv. syringae 642]
gi|298160864|gb|EFI01880.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320321686|gb|EFW77785.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. B076]
gi|320331112|gb|EFW87083.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
gi|330870073|gb|EGH04782.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330890252|gb|EGH22913.1| ribonuclease P [Pseudomonas syringae pv. mori str. 301020]
gi|330898609|gb|EGH30028.1| ribonuclease P [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330937302|gb|EGH41310.1| ribonuclease P [Pseudomonas syringae pv. pisi str. 1704B]
gi|330952336|gb|EGH52596.1| ribonuclease P [Pseudomonas syringae Cit 7]
gi|330970323|gb|EGH70389.1| ribonuclease P [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330976400|gb|EGH76457.1| ribonuclease P [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330987017|gb|EGH85120.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011889|gb|EGH91945.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 133
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + S
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
>gi|225028840|ref|ZP_03718032.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
gi|224953836|gb|EEG35045.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
Length = 116
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS L+K +F V + G+ + F + + N+ S+ RVG +V+KK G ++ R+R
Sbjct: 1 MSEFKSLRKNWEFQAVYRNGKSKANRCFVMIIKKNDTSS--NRVGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+ R ++E +RL G +K G+D V++A+ A + + +
Sbjct: 59 VTRVIREVMRLHW-GEIKSGYDIVIVARPSAKDSDYGKFESAI 100
>gi|330876351|gb|EGH10500.1| ribonuclease P [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 133
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + S
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
>gi|310779693|ref|YP_003968026.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
gi|309749016|gb|ADO83678.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
Length = 113
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK QF + K ++ ++SL + N N +VGF V+KK G AV RNR++R
Sbjct: 1 MNKLKKNEQFQNIYKTGIKAFGYYSLVYIKTNKENNHNQVGFVVSKKTGNAVCRNRLKRL 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRR 108
+E RL E +K +D V IAKR A + + ++ ++
Sbjct: 61 FREYYRLN-EKKIKKSYDIVFIAKRTAGVKVKTLKYYQMEKDLNLIFKK 108
>gi|307243393|ref|ZP_07525550.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
gi|306493203|gb|EFM65199.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
Length = 125
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK F V +G+ + + N + R+G +++KK G A ERNR+RR +K
Sbjct: 9 IKKDSDFRKVYQRGKSLADRNLVIYTMKNKSD--KSRIGISISKKVGKAHERNRIRRCIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
EA RL + + G+D V IA+ +A ++EL ++ GK K
Sbjct: 67 EAYRLNIDDKVLGGYDLVFIARINAADKDYRELERSLKYICKKANIIKKDGKKQVSK 123
>gi|289579534|ref|YP_003478161.1| ribonuclease P protein component [Thermoanaerobacter italicus Ab9]
gi|297545656|ref|YP_003677958.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289529247|gb|ADD03599.1| ribonuclease P protein component [Thermoanaerobacter italicus Ab9]
gi|296843431|gb|ADH61947.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 116
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + +KK +F V G+ F + + NN RVG++V+KK G +V RNR+
Sbjct: 3 NKVVKIKKSYEFKKVYSNGKSTANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRNRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR L E+ RL + +K G D + +A+ + F L + + + +
Sbjct: 61 RRLLHESFRL-LDIEIKKGFDIIFVARGKIVEADFHTLKSSMRKLIMKT 108
>gi|323137578|ref|ZP_08072655.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
gi|322397204|gb|EFX99728.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
Length = 148
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGC 53
L++R F K G F+++++ + PR GFTVT+K
Sbjct: 15 TPMRLRRRADFVRASKTGARFSARLFTVQMVRQPDDGAGKDAAPAAPPRFGFTVTRKVAG 74
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV RNR+RRRLKEA+R+ + G DYV +A+R L PF ++ + E R +
Sbjct: 75 AVGRNRIRRRLKEALRVSGASGAREGRDYVFVARRGTLTAPFNDIISQMAEGFARLEERG 134
Query: 114 YSGKNFSRK 122
+ +
Sbjct: 135 AGARRKQKD 143
>gi|171779010|ref|ZP_02920018.1| hypothetical protein STRINF_00893 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282368|gb|EDT47793.1| hypothetical protein STRINF_00893 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 119
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F L L N S RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGTSVANRKFVLYHLEKNQS--HYRVGLSVSKKLGNAVTRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + +L D+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVIMELSPNLLNQ--DFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|153854257|ref|ZP_01995556.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
gi|149753032|gb|EDM62963.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
Length = 113
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F + +KG+ + + VL N S R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKNKDFQYIYRKGKSYANKYLVMYVLENGTSQ--NRLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +K++ +
Sbjct: 59 LTRLIRESYRLQEERF-RCGLDIIVIARIGAKGKDYKDIVGAMLHL 103
>gi|253582578|ref|ZP_04859799.1| ribonuclease P [Fusobacterium varium ATCC 27725]
gi|251835448|gb|EES63988.1| ribonuclease P [Fusobacterium varium ATCC 27725]
Length = 116
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N NL R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKKNEENL-KRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRRNK 110
R E LK G+D + +AKR A + ++++ ++ ++ +
Sbjct: 63 YYR-KFENQLKDGYDIIFVAKRTAGEKVKTLKYQDMEKDLIKVMKSGR 109
>gi|283797191|ref|ZP_06346344.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|291075150|gb|EFE12514.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|295090274|emb|CBK76381.1| ribonuclease P protein component [Clostridium cf. saccharolyticum
K10]
Length = 119
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK F V + G+ + V+ R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKYADFQKVYRTGKSYANRLLIMYVMKTEEGADT-RIGISVSKKVGNSVVRHH 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL ++K G D V++A+ A F+++ + ++
Sbjct: 60 ITRLLRESYRLNKP-MVKAGLDIVVVARAAAKESNFRQIESAYLHL 104
>gi|27383208|ref|NP_774737.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
gi|27356382|dbj|BAC53362.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
Length = 132
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G P F L+ ++S + R+GFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFLAVANGARVNSPAFVLQSRPRDDSGPI-RIGFTVTKKNGNAPERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
L+E V+ +++ HDYVL+ +RDAL PF + + R+ +K + ++ K S+
Sbjct: 60 LRELVKRLEPVLMQPHHDYVLVGRRDALSRPFATMLDDL--RIAFSKPARHTAKEQSK 115
>gi|20809129|ref|NP_624300.1| ribonuclease P [Thermoanaerobacter tengcongensis MB4]
gi|22001932|sp|Q8R6K4|RNPA_THETN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|20517809|gb|AAM25904.1| RNase P protein component [Thermoanaerobacter tengcongensis MB4]
Length = 116
Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LKK ++F V G+ F + + N + R G++V+KK G +V RNR++
Sbjct: 4 KLTKLKKTQEFKRVYSNGKTVANRFIVMYYMPNGLQ--VNRAGYSVSKKIGKSVVRNRVK 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E+ RL L+ G+D V +A+ F L + +++
Sbjct: 62 RLLHESFRLLNSN-LRQGYDVVFVARGKIAEADFHTLKESIEKLLKKT 108
>gi|160893414|ref|ZP_02074199.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
gi|156864809|gb|EDO58240.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
Length = 117
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MSN LK R+F V + + + + N+ R+G +V+KK G +V R++
Sbjct: 1 MSNFITLKNSREFGSVYNTKDSVANKYLVMYLRANSLE--YNRLGISVSKKVGNSVVRHK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++EA RL + ++ G+D V +A+ A + E+ + + R K
Sbjct: 59 VTRLIREAYRLN-KDCIRSGYDIVFVARTTAKDKGYHEIESAMMHLFRLKK 108
>gi|73667200|ref|YP_303216.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
gi|72394341|gb|AAZ68618.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
Length = 119
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQGCAVE 56
+ + LKKR+ F + G G L+V+ + LL RVGFTV+KK G AV
Sbjct: 3 LKGVTTLKKRKCFLFARNNGAFIGGFGLFLQVVKEPHGELLDGTIRVGFTVSKKVGKAVI 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR + R G+ Y+LI R + FKE+ + +
Sbjct: 63 RNKVKRRFRILARDVLVKHANKGYYYILIGNRYTPKVSFKEMSLRLISYL 112
>gi|323705847|ref|ZP_08117419.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534843|gb|EGB24622.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 125
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +K+ R F V + G+ + + L N + RVGF+++KK G +V RNR +
Sbjct: 13 DMIKIKRSRDFKNVYRHGKSISNQYIVMYFLENGLD--VNRVGFSISKKIGKSVVRNRYK 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E RL +G LK G+D + IA+ + F L N ++++
Sbjct: 71 RLLYENFRL-LDGDLKKGYDIIFIARNKIVESDFYTLGNAMRRLLKKS 117
>gi|300857415|ref|YP_003782399.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
gi|300437530|gb|ADK17297.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
Length = 111
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V ++G+ L + N + R+G +V+KK G +V RNR++
Sbjct: 2 DVYRIKKNAEFRAVYRRGKSFSNNLLVLYIYRNKKG--INRLGISVSKKVGKSVIRNRIK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE RL E +K G+D V IA+ + + E+ N +++
Sbjct: 60 RLIKENFRLNIED-IKVGYDLVFIARNLSNGKSYIEIENSMKNLIKKA 106
>gi|312865637|ref|ZP_07725861.1| ribonuclease P protein component [Streptococcus downei F0415]
gi|311098758|gb|EFQ56978.1| ribonuclease P protein component [Streptococcus downei F0415]
Length = 150
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ + F ++ +G+ F + L + RVG +V+KK G AV RNR
Sbjct: 40 LKKTYRVKRNQDFQVIFGQGKSVANRKFVVYSLEKSQK--HFRVGLSVSKKLGNAVVRNR 97
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R+L+ + A + HD+V+IA++ + ++E+ + +
Sbjct: 98 IKRKLRHVLMELAPFLTT--HDFVVIARKGVEELNYQEVKQNLRHVL 142
>gi|296330035|ref|ZP_06872519.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676759|ref|YP_003868431.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153074|gb|EFG93939.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305415003|gb|ADM40122.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 116
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ L RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + ++E R
Sbjct: 60 IKRLIRQAFLEEKEKLKEK--DYIIIARKPASQLTYEETKKSLQHLFR 105
>gi|167759575|ref|ZP_02431702.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC 35704]
gi|167662802|gb|EDS06932.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC 35704]
Length = 113
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F LV K G+ + + + NN R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKNKDFQLVYKCGKSYANKYLVMYIKENNTG--KNRLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A +K++ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGIDIVVIARIGAKGRTYKDIESALLHL 103
>gi|15616627|ref|NP_244933.1| ribonuclease P [Bacillus halodurans C-125]
gi|9789796|sp|Q9RCA4|RNPA_BACHD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|5672645|dbj|BAA82683.1| 56%-identity [Bacillus halodurans]
gi|10176690|dbj|BAB07784.1| ribonuclease P [Bacillus halodurans C-125]
Length = 119
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ +F+ V G F + VL + RVG +V+KK G AV RNR
Sbjct: 1 MKKEHRIKRSDEFSRVFNEGFSVANRQFVIYVLPKEGQDFF-RVGLSVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ + E + DYV+IA++ A + ++++ ++ K
Sbjct: 60 VKRLIRTFFQEH-EQAISGERDYVIIARKPAADMTYEQVKGSLWHVCKKAK 109
>gi|77461962|ref|YP_351469.1| ribonuclease P [Pseudomonas fluorescens Pf0-1]
gi|123602664|sp|Q3K426|RNPA_PSEPF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77385965|gb|ABA77478.1| ribonuclease P protein component [Pseudomonas fluorescens Pf0-1]
Length = 133
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + ++ G D V++A++ + EL HF + +R R+
Sbjct: 75 LHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVP 119
>gi|295115470|emb|CBL36317.1| ribonuclease P protein component [butyrate-producing bacterium
SM4/1]
Length = 119
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK F V + G+ + V+ R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKYADFQKVYRTGKSYANRLLIMYVMKTEEGADT-RIGISVSKKVGNSVVRHH 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL ++K G D V++A+ A F+++ + ++
Sbjct: 60 ITRLLRESYRLNKP-MVKAGLDIVVVARAAAKESNFRQIESAYLHL 104
>gi|330685253|gb|EGG96914.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU121]
Length = 115
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + +N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQKIYKSGKSVANRQFVVYTYDNKEQEHF-RLGISVSKKLGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKQDIITK--DIIVIARQPAKKMSTLEIQGSLEHVLKIAK 108
>gi|330812751|ref|YP_004357213.1| ribonuclease, P protein component [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380859|gb|AEA72209.1| putative ribonuclease, P protein component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 156
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L +N PR+G + KK +V+RNR++R ++E+ R
Sbjct: 38 RHFKAVFDSPTGKVPGKNLLLLARSNDLDHPRLGLVIGKKSVKLSVQRNRLKRLMRESFR 97
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + ++ G D V++A++ + EL HF + +R R+
Sbjct: 98 LNQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVP 142
>gi|146309635|ref|YP_001190100.1| ribonuclease P [Pseudomonas mendocina ymp]
gi|254808082|sp|A4Y1A2|RNPA_PSEMY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145577836|gb|ABP87368.1| ribonuclease P protein component [Pseudomonas mendocina ymp]
Length = 134
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF V K P S+ +L +N PR+G + KK AVERNR++R+++E+ R
Sbjct: 16 RQFKAVFDSPSGKAPGKSVLLLARDNQLDHPRLGLVIGKKSVKLAVERNRIKRQIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + ++ G D V++A++ + EL F + +R RS S
Sbjct: 76 LNQDNLV--GWDIVVVARKGLGDLENGELAQQFGKLWKRLARSRPSRDA 122
>gi|73663754|ref|YP_302535.1| ribonuclease P [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72496269|dbj|BAE19590.1| ribonuclease P protein component [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 115
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK F KKG+ F + N N R+G +V+KK G AV RNR++R +
Sbjct: 7 RIKKNSDFQFIYKKGKSVANRQFVIYTQPNKALNHF-RLGISVSKKLGNAVVRNRIKRAI 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+E ++ E +L D ++IA++ A + ++ ++ K
Sbjct: 66 RENFKIHKEDILP--MDIIVIARQPAKDMDTLQIQASLEHVLKIAK 109
>gi|288906263|ref|YP_003431485.1| ribonuclease P protein component [Streptococcus gallolyticus UCN34]
gi|306832309|ref|ZP_07465463.1| ribonuclease P protein component [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834433|ref|ZP_07467547.1| ribonuclease P protein component [Streptococcus bovis ATCC 700338]
gi|325979274|ref|YP_004288990.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288732989|emb|CBI14570.1| ribonuclease P protein component [Streptococcus gallolyticus UCN34]
gi|304423419|gb|EFM26571.1| ribonuclease P protein component [Streptococcus bovis ATCC 700338]
gi|304425748|gb|EFM28866.1| ribonuclease P protein component [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325179202|emb|CBZ49246.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 119
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F + L N RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGTSVANRKFVVYQLEKNQG--HYRVGLSVSKKLGNAVTRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ V + + HD+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVVMELSPNL--RHHDFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|225571948|ref|ZP_03780818.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
gi|225159396|gb|EEG72015.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNKDFQTVYNKGISCANKYLVMYVMENHTER--NRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +KE+ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHL 103
>gi|196249891|ref|ZP_03148587.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
gi|196210767|gb|EDY05530.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
Length = 167
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 10 RRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+F V ++G F + L+ R+G +V+KK G AV RN+++R +++
Sbjct: 56 NEEFQEVFRRGVSTANRQFVVYTLDRPEQ-PYFRIGLSVSKKLGKAVVRNQIKRYVRQCF 114
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + + G DYV+IA++ + + E+ + +R+ G+
Sbjct: 115 -LELKEEVVPGKDYVIIARQPVAEMGYAEVKKSLLHVLRKAGGLKKRGRT 163
>gi|330881910|gb|EGH16059.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
Length = 133
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKT 123
>gi|291486744|dbj|BAI87819.1| ribonuclease P [Bacillus subtilis subsp. natto BEST195]
Length = 116
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ L RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E DY++IA++ A + F+E R
Sbjct: 60 IKRLIRQAF--LEEKERLKEKDYIIIARKPASQLTFEETKKSLQHLFR 105
>gi|254463010|ref|ZP_05076426.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2083]
gi|206679599|gb|EDZ44086.1| ribonuclease P protein component [Rhodobacteraceae bacterium
HTCC2083]
Length = 88
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+++ + ++ + VGFT +KK G AV RNR +RRL+EA R+ G DYVLI +
Sbjct: 2 MVQMRDRHDEDPNVGVGFTCSKKVGNAVARNRAKRRLREAARVVLPLHGVIGCDYVLIGR 61
Query: 88 RDA-LFIPFKELCNHFVERVRRNKRSY 113
+A PF L + +++ S
Sbjct: 62 AEATANRPFDLLVSDLRYALKKLHASK 88
>gi|223043335|ref|ZP_03613381.1| ribonuclease P protein component [Staphylococcus capitis SK14]
gi|222443124|gb|EEE49223.1| ribonuclease P protein component [Staphylococcus capitis SK14]
Length = 115
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F KKG+ F + NN+ N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTY-NNSENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D V+IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKEDIIAK--DIVVIARHPARDMTTLEIQGSLEHVLKIAK 108
>gi|239637284|ref|ZP_04678271.1| ribonuclease P protein component [Staphylococcus warneri L37603]
gi|239597121|gb|EEQ79631.1| ribonuclease P protein component [Staphylococcus warneri L37603]
Length = 115
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + +N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQKIYKRGKSVANRQFVVYTYDNKEQEHF-RLGISVSKKLGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKQDIITK--DIIVIARQPAKSMSTLEIQGSLEHVLKIAK 108
>gi|71735437|ref|YP_277295.1| ribonuclease P [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123634466|sp|Q48BF0|RNPA_PSE14 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71555990|gb|AAZ35201.1| ribonuclease P protein component [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 133
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D V++A++ + EL +F + +R RS + S
Sbjct: 75 QHQDSLV--GWDIVIVARKGLGDVENPELIQYFGKLWKRLARSRPIPEEKS 123
>gi|291521108|emb|CBK79401.1| ribonuclease P protein component [Coprococcus catus GD/7]
Length = 119
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V G+ R + + V+ N R+G +V+KK G +V R+ + R ++
Sbjct: 7 LKKNRDFKTVYGNGKSRANKYLVMYVMKNGTE--KNRIGISVSKKVGNSVVRHHLTRLIR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
E RL E K G D + I + +A I + L +
Sbjct: 65 EIYRLN-EHHFKKGLDIIFIVRVNAKKIDYHTLEKALMHV 103
>gi|167038673|ref|YP_001666251.1| ribonuclease P [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167041023|ref|YP_001664008.1| ribonuclease P [Thermoanaerobacter sp. X514]
gi|300913766|ref|ZP_07131083.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307725548|ref|YP_003905299.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|320117065|ref|YP_004187224.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687617|sp|B0K5N8|RNPA_THEPX RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687686|sp|B0K8I3|RNPA_THEP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166855263|gb|ABY93672.1| ribonuclease P protein component [Thermoanaerobacter sp. X514]
gi|166857507|gb|ABY95915.1| ribonuclease P protein component [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300890451|gb|EFK85596.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307582609|gb|ADN56008.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|319930156|gb|ADV80841.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 116
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I +KK +F V G+ F + + NN RVG++V+KK G +V RNR+R
Sbjct: 4 KIVKIKKSYEFKKVYSNGKSVANQFVVMYYMENNLG--FNRVGYSVSKKIGKSVVRNRVR 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E+ RL + +K G D + +A+ + F L N + + +
Sbjct: 62 RLLHESFRL-LDIEIKTGFDIIFVARGKIVEADFHTLKNSMRKLIMKT 108
>gi|118443844|ref|YP_876975.1| ribonuclease P [Clostridium novyi NT]
gi|166226715|sp|A0PX73|RNPA_CLONN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118134300|gb|ABK61344.1| ribonuclease P protein component [Clostridium novyi NT]
Length = 113
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V ++G+ L V NNN+ RVG +V+KK G +V R+R
Sbjct: 1 MKKNERIRKNIEFRRVYRRGKSYSNSLLVLYVFKNNNNVDTSRVGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL +K +D V +A+ + +KE+ ++R
Sbjct: 61 VKRLISESYRLNCSN-IKEKYDLVFVARNKSKDKTYKEIEGSVTNLLKRA 109
>gi|260432497|ref|ZP_05786468.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416325|gb|EEX09584.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
Length = 90
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 28 SLEVLNN-NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
++ + RVGFT +KK G AV RNR +RRL+EA R + G DYVLI
Sbjct: 2 MVQARKRAPDEAEGIRVGFTCSKKVGNAVARNRAKRRLREAARAVLPDHGQDGWDYVLIG 61
Query: 87 KRDALFI-PFKELCNHFVERVRRNKRSYY 114
+ + PF L + + +R+
Sbjct: 62 RAEVTAARPFDALLDDLRQALRKIHSPRK 90
>gi|291165951|gb|EFE27998.1| ribonuclease P protein component [Filifactor alocis ATCC 35896]
Length = 112
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V +G+ + N S RVGF+++KK G AV RN+ RRRLK
Sbjct: 10 LKKNEDFRTVYNRGKSFANRQLVFYYMPNKLSE--NRVGFSISKKFGKAVYRNKARRRLK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E +R A K G+D + I + A + L ++ +
Sbjct: 68 EILR--ASSCKKQGYDMIFIVRPGAKEADYATLEKSVTHLFQKTE 110
>gi|242372604|ref|ZP_04818178.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
gi|242349659|gb|EES41260.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
Length = 115
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F KKG+ F + NN+ N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTY-NNSENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKDDIIAR--DIIVIARQPAKDMTTLEIQGSLEHVLKIAK 108
>gi|270308303|ref|YP_003330361.1| RNase P protein component [Dehalococcoides sp. VS]
gi|270154195|gb|ACZ62033.1| RNase P protein component [Dehalococcoides sp. VS]
Length = 126
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V G G ++ L NN RVGF V+KK G AVERNR
Sbjct: 7 MKYSNRLTKREEYSRVLAGDGTYIGQLAVMKALPNNLE--FSRVGFIVSKKVGGAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R A L+ G D V IA+ A + E+ + + + + +
Sbjct: 65 AKRILRESLRTIA---LRQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 121
Query: 120 SRKS 123
S K+
Sbjct: 122 SFKT 125
>gi|16081157|ref|NP_391985.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221312088|ref|ZP_03593935.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221316413|ref|ZP_03598218.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221321326|ref|ZP_03602620.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325609|ref|ZP_03606903.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313666|ref|YP_004205953.1| ribonuclease P [Bacillus subtilis BSn5]
gi|585905|sp|P25814|RNPA_BACSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|467389|dbj|BAA05235.1| protein component of ribonuclease P [Bacillus subtilis]
gi|2636652|emb|CAB16142.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. subtilis str.
168]
gi|320019940|gb|ADV94926.1| ribonuclease P [Bacillus subtilis BSn5]
Length = 116
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ L RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E DY++IA++ A + ++E R
Sbjct: 60 IKRLIRQAF--LEEKERLKEKDYIIIARKPASQLTYEETKKSLQHLFR 105
>gi|295402124|ref|ZP_06812083.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112755|ref|YP_003991071.1| ribonuclease P [Geobacillus sp. Y4.1MC1]
gi|294975807|gb|EFG51426.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217856|gb|ADP76460.1| ribonuclease P protein component [Geobacillus sp. Y4.1MC1]
Length = 116
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V ++G F + +L+ R+G +V+KK G AV RNR++R +++A L
Sbjct: 12 EFQEVFQRGTSMANRQFVIYMLDRPEQ-PYFRIGLSVSKKLGKAVVRNRIKRYIRQAF-L 69
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ + G DYV+IA+ A + + E+ + + +R+ K
Sbjct: 70 EMKDDILPGKDYVIIARLPAADMTYFEVKSSLLHVLRKAGALKRERK 116
>gi|255527588|ref|ZP_05394452.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296186786|ref|ZP_06855187.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|255508721|gb|EET85097.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296048500|gb|EFG87933.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
Length = 110
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 8 KKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K +F ++G+ L N + R+G +V+KK G +V RNR++R +KE
Sbjct: 7 RKNSEFRFIYRRGKSFSNHLLVLYFYKNKKD--VNRIGISVSKKVGKSVTRNRVKRLIKE 64
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ RL +L G+D V IA+ A + E+ + ++R
Sbjct: 65 SYRLNNSELL-TGYDLVFIARSAASEKSYNEISDAIKNLLKRA 106
>gi|319891292|ref|YP_004148167.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
gi|317160988|gb|ADV04531.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
Length = 115
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + +KG+ F + + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNADFQLIYRKGKSVANRQFVVYTYE-TQTLTHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E +L D ++IA+ A + E+ ++ K
Sbjct: 60 IKRSIRECFKVHKEDILPK--DIIVIARFPAKTMSTAEIQKSLEHVLKIAK 108
>gi|220925222|ref|YP_002500524.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
gi|219949829|gb|ACL60221.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
Length = 141
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVE 56
+ + +R + G + + + + R GFTVTK+ G A E
Sbjct: 6 PPVGRITRRPDYLAAAAGRRFHTGRLTAQGRLREAETAPDGSAGLRFGFTVTKRTGHATE 65
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR+RRRLK AV D VLI +R+AL PF+ L + + + +G
Sbjct: 66 RNRIRRRLKAAVAAIGTDSADQPLDVVLIGRREALSAPFEVLVDDIRRALAAVTKPKPAG 125
Query: 117 K 117
K
Sbjct: 126 K 126
>gi|91974550|ref|YP_567209.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
gi|91681006|gb|ABE37308.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ ++ + RVGFTVTKK G A ERNR+RRR
Sbjct: 130 MDRLRQRADFIAVAGGLRISGPAFVLQGRRRDDEGPV-RVGFTVTKKIGTATERNRIRRR 188
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++E V+ + DYVL+ +R AL F + + R R
Sbjct: 189 MRELVKRADRSFMLPNSDYVLVGRRAALSRDFAVMLGDLRSALDRIARRSSKPD 242
>gi|169825325|ref|YP_001692936.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302380136|ref|ZP_07268609.1| ribonuclease P protein component [Finegoldia magna ACS-171-V-Col3]
gi|303234472|ref|ZP_07321110.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
gi|238687765|sp|B0S3V6|RNPA_FINM2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|167832130|dbj|BAG09046.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302312078|gb|EFK94086.1| ribonuclease P protein component [Finegoldia magna ACS-171-V-Col3]
gi|302494427|gb|EFL54195.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
Length = 113
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R++ +V K G+ FSL V N+ R+GF+VTKK G AVERNR
Sbjct: 1 MDKSVRLRDNREYNVVYKRGKTYYNRNFSLVVYNSKKGT---RIGFSVTKKYGNAVERNR 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L+E VRL K G D V+I K++ + +K+L + + R+
Sbjct: 58 IKRKLREIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQLESALLHVCRKASNKK 110
>gi|160882063|ref|YP_001561031.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
gi|189043733|sp|A9KLY3|RNPA_CLOPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160430729|gb|ABX44292.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
Length = 116
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK +QF V K G+ + + V N S + R+G +V+KK G +V R+R+ R ++
Sbjct: 5 LKNSQQFGNVYKNGKSFANKYLVMYVCKNELS--INRLGISVSKKVGNSVVRHRISRLIR 62
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
E+ RL + + G D V++A+ + + E+ + + + +K S +
Sbjct: 63 ESYRLN-DSISNSGLDIVIVARAGSKGKNYSEISSALMHLAKLHKIISSSEPDR 115
>gi|258611657|ref|ZP_05711587.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
gi|258605136|gb|EEW17744.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
Length = 109
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F V ++G+ F + L SN R+G +V+KK G AV RNR++R ++++
Sbjct: 2 DFQKVFRRGKSFANRQFVVYTLKQEGSNHF-RIGLSVSKKIGNAVCRNRIKRYIRQSFHE 60
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ +Y++IA++ A + F E+ + ++
Sbjct: 61 LESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLK 96
>gi|580904|emb|CAA44400.1| unnamed protein product [Bacillus subtilis]
Length = 119
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F V K G F L L+ ++ L RVG +V+KK G AV RNR
Sbjct: 4 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E DY++IA++ A + ++E R
Sbjct: 63 IKRLIRQAF--LEEKERLKEKDYIIIARKPASQLTYEETKKSLQHLFR 108
>gi|304439082|ref|ZP_07399001.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372441|gb|EFM26028.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 106
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
ILKK R F V K + G LN NN RVGF +TKK G AV RN+ +RRL+
Sbjct: 4 ILKKDRDFQKVYKKKNVTGNRVFTMFLNKNN-LPTTRVGFVITKKFGNAVTRNKFKRRLR 62
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + LK G+D VLI K+D +I + EL F +R+
Sbjct: 63 MILR---DYDLKPGYDVVLILKKDKSYIDYSELKRSFEHVLRKK 103
>gi|314934962|ref|ZP_07842321.1| ribonuclease P protein component [Staphylococcus caprae C87]
gi|313652892|gb|EFS16655.1| ribonuclease P protein component [Staphylococcus caprae C87]
Length = 115
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F KKG+ F + NN N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTYNNK-ENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D V+IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKEDIIAK--DIVVIARHPARDMTTLEIQGSLEHVLKIAK 108
>gi|219856810|ref|YP_002473932.1| hypothetical protein CKR_3467 [Clostridium kluyveri NBRC 12016]
gi|219570534|dbj|BAH08518.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 126
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V K G+ L V N + + R+G +V+KK G +V RNR++
Sbjct: 16 DVYRIKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKN--VNRLGVSVSKKVGKSVVRNRIK 73
Query: 62 RRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL ++ + +++G+D V IA++ + + E+ N +++
Sbjct: 74 RLIKESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINNSVKNLIKKA 122
>gi|166032894|ref|ZP_02235723.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
gi|166027251|gb|EDR46008.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
Length = 112
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V K G + + VL N R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKHKDFQHVYKKGSSYANKYLVMYVLENQTEG--NRLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ R ++E+ RL E + G D V+IA+ A ++++ + + R
Sbjct: 59 LTRLIRESYRL-QEDMFSSGRDIVVIARGAAKGKNYRDIESALIHLAR 105
>gi|90962706|ref|YP_536622.1| ribonuclease P [Lactobacillus salivarius UCC118]
gi|227891667|ref|ZP_04009472.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|301300477|ref|ZP_07206676.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122448382|sp|Q1WRF9|RNPA_LACS1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|90821900|gb|ABE00539.1| Ribonuclease P protein component [Lactobacillus salivarius UCC118]
gi|227866470|gb|EEJ73891.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|300851924|gb|EFK79609.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 113
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G+ F + +L + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKEAEFQTVFTQGQSCANRQFVVYMLEKPDQKHF-RVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + LK D+++IA+ ++ E+ H ++ K
Sbjct: 60 VKRRIRQSL-TELKPQLKQDCDFLVIARPTVAYMSMAEVKEHLKHVLKLAK 109
>gi|157829706|pdb|1A6F|A Chain A, Rnase P Protein From Bacillus Subtilis
Length = 119
Score = 87.6 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F V K G F L L+ ++ L RVG +V+KK G AV RNR
Sbjct: 4 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDEL-RVGLSVSKKIGNAVMRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E DY++IA++ A + ++E R
Sbjct: 63 IKRLIRQAF--LEEKERLKEKDYIIIARKPASQLTYEETKKSLQHLFR 108
>gi|153956507|ref|YP_001397272.1| ribonuclease P [Clostridium kluyveri DSM 555]
gi|189043732|sp|A5N455|RNPA_CLOK5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146349365|gb|EDK35901.1| RnpA [Clostridium kluyveri DSM 555]
Length = 112
Score = 87.6 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V K G+ L V N + + R+G +V+KK G +V RNR++
Sbjct: 2 DVYRIKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKN--VNRLGVSVSKKVGKSVVRNRIK 59
Query: 62 RRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL ++ + +++G+D V IA++ + + E+ N +++
Sbjct: 60 RLIKESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINNSVKNLIKKA 108
>gi|327438164|dbj|BAK14529.1| RNase P protein component [Solibacillus silvestris StLB046]
Length = 113
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ +KK F V KKG+ F + L R+G +V+KK G AV R +
Sbjct: 1 MNKRQRIKKNEDFQKVFKKGKSFANRQFVVYCLKKEEQQAF-RIGLSVSKKVGNAVTRVQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A L + +K DYV+IA+ A + F E ++
Sbjct: 60 VKRYIRQAF-LELKDEVKQDMDYVIIARTQAATLDFHETKKSLQHVLK 106
>gi|311070646|ref|YP_003975569.1| ribonuclease P [Bacillus atrophaeus 1942]
gi|310871163|gb|ADP34638.1| ribonuclease P [Bacillus atrophaeus 1942]
Length = 115
Score = 87.2 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L VL+ ++ R G +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSMANRQFVLYVLDQPEADEF-RAGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ ++ + + + DY++IA++ A + F+E R
Sbjct: 60 VKRLIRQVLQDEKDKLKQK--DYIIIARKPASQLTFEETKKSLQHLFR 105
>gi|255283811|ref|ZP_05348366.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
gi|255265694|gb|EET58899.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
Length = 118
Score = 87.2 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK R F V + G+ + + L N + R+G +V+KK G +V R+RM R ++
Sbjct: 7 LKKNRDFQNVYRQGKSYANKYLIMYALQN--AGTRNRLGISVSKKVGNSVVRHRMTRLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
E+ RL E + G D+V+I + A ++E+ + +
Sbjct: 65 ESYRLN-ESAFQGGFDFVVIVRPAAKEKGYREIESALMHL 103
>gi|303240055|ref|ZP_07326576.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
gi|302592324|gb|EFL62051.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
Length = 114
Score = 87.2 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F KKG+ + L L+N + + R+G T +KK G +V+RNR+RR +K
Sbjct: 7 IKKNKEFLKLYKKGKFYVAKYLVLYTLDNKSK--VNRLGITASKKFGGSVKRNRIRRLIK 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E R EG L G D V +A+ F ++ +R+
Sbjct: 65 ECYR-HYEGQLNEGFDLVFVARSSEDMPSFSDIKREMKFLLRK 106
>gi|330964183|gb|EGH64443.1| ribonuclease P [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 133
Score = 86.8 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L NN PR+G + KK +VERNR++R ++E+ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ ++ G D ++A++ + EL HF + +R RS + S
Sbjct: 75 QHQDSLV--GWDIAIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
>gi|159042888|ref|YP_001531682.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
gi|157910648|gb|ABV92081.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
Length = 129
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL--PRVGFTVTKKQGCAVERNRMR 61
+C+L KR F + + P F L+ RVGFT +KK G AV RNR +
Sbjct: 14 LCVLTKRADFLRAARARRQSAPAFLLQARRRAPDEPATGIRVGFTCSKKVGNAVARNRAK 73
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
RRL+E RL + G DYVLI ++ A
Sbjct: 74 RRLREIARLELPTNGRDGWDYVLIGRKAATA 104
>gi|182416752|ref|ZP_02948149.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237669612|ref|ZP_04529590.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182379409|gb|EDT76904.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237654846|gb|EEP52408.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 125
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVER 57
I LKK +F V ++G+ + +L N +NL ++G +V+KK G +V R
Sbjct: 2 IYRLKKNFEFKFVYRRGKSFANELLVMYILKNKRNKDKENNLYNKLGVSVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +R + E+ RL +LK G+D++ IA+ + + ++ + +++
Sbjct: 62 SRSKRLISESFRLNCNYILK-GYDFIFIARNPIVDKNYFDVEKSMINLIKKA 112
>gi|323341097|ref|ZP_08081345.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
gi|323091518|gb|EFZ34142.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
Length = 121
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G+ F + ++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKEAEFQKVFTQGKSCANKQFVVYMIEKPKQ-PHFRVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + LK D+++IA+ F+ E+ H + + K
Sbjct: 60 VKRRIRQSL-TELKPQLKQDCDFIVIARPGVAFMSTAEVKQHLIHVLHLAK 109
>gi|308175812|ref|YP_003922517.1| protein component of ribonuclease P [Bacillus amyloliquefaciens DSM
7]
gi|307608676|emb|CBI45047.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus amyloliquefaciens DSM 7]
gi|328555788|gb|AEB26280.1| ribonuclease P [Bacillus amyloliquefaciens TA208]
gi|328914177|gb|AEB65773.1| protein component of ribonuclease P (RNase P) [Bacillus
amyloliquefaciens LL3]
Length = 116
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K+G F L L+ L RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKRGTSMANRQFVLYTLDQPQQKEL-RVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++A++ E L D+++IA++ A + +E R+
Sbjct: 60 VKRLIRQAIQE--EKELLKPKDFIIIARKPAAELSIEETKKSLQHLFRKT 107
>gi|291561649|emb|CBL40448.1| ribonuclease P protein component [butyrate-producing bacterium
SS3/4]
Length = 114
Score = 86.8 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V ++G+ + + V+++ + R+G + +KK G +V R+R
Sbjct: 1 MKRFNSLKKNQDFQTVYRRGKSYANKYLVMYVMDSGREDT--RIGISASKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
R ++E+ RL + +L+ G D +++A+ A F ++ + F+
Sbjct: 59 FARLVRESFRLN-KDILEEGKDIIVVARAAAKDKNFDKIESAFLHL 103
>gi|304318137|ref|YP_003853282.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779639|gb|ADL70198.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 124
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +K+ F V + G+ + + L NN + RVGF+V+KK G +V RNR +
Sbjct: 13 DMVKIKRSSDFKNVYRYGKSISNQYIVMYYLENNLG--INRVGFSVSKKVGKSVIRNRYK 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E RL + K G+D + IA+ + F + N + ++
Sbjct: 71 RLLYENFRLLDRDLFK-GYDIIFIARNKIVEADFYMVGNAMRRLLTKS 117
>gi|319744393|gb|EFV96752.1| ribonuclease P protein component [Streptococcus agalactiae ATCC
13813]
Length = 129
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 21 LKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEKEQK--HFRVGISVSKKLGNAVVRNA 78
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 79 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 124
>gi|323486756|ref|ZP_08092075.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
gi|323399895|gb|EGA92274.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
Length = 118
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + G + V+ + R+G +V+KK G +V R+
Sbjct: 1 MKKFNSIKKNSDFQKVYRTGRSFANKLLVMYVIKTEREDT--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL + +K G D V++A+ A FK++ + ++
Sbjct: 59 ITRLVRESYRLNKDR-VKTGLDIVVVARAAAKESDFKKIESAYLHL 103
>gi|323465555|gb|ADX77708.1| ribonuclease P protein component [Staphylococcus pseudintermedius
ED99]
Length = 115
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + +KG+ F + + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNVDFQLIYRKGKSVANRQFVVYTYE-TQTLTHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E +L D ++IA+ A + E+ ++ K
Sbjct: 60 IKRSIRECFKVHKEDILPK--DIIVIARFPAKTMSTAEIQKSLEHVLKIAK 108
>gi|294085070|ref|YP_003551830.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664645|gb|ADE39746.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 117
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS+ I+ R F + GE ++ + + ++ R G T TKK G AV RNR
Sbjct: 1 MSDKHIITSRPGFIRARNHGEKAISKGVIIQAVRRDGADW--RYGLTATKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++RRL+ + + G DYVLI + F EL + +R R +
Sbjct: 59 VKRRLRVIAKQVLAPIAMSGVDYVLIGRATTATSSFDELVTEVKKSLRYLHRKLGEAE 116
>gi|260588819|ref|ZP_05854732.1| ribonuclease P protein component [Blautia hansenii DSM 20583]
gi|260540598|gb|EEX21167.1| ribonuclease P protein component [Blautia hansenii DSM 20583]
Length = 123
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F LV K G + + + N S R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNNDFQLVYKTGTSYANRYLVMYLKENQLSR--NRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE--RVRRNKRSYYSGK 117
+ R ++E+ RL E G+D V++ + + + L + + R+ + RS + K
Sbjct: 59 LTRLIRESYRLNEEKFC-CGYDIVVVVRVNGKNQNYHSLESALLHLGRLHKVVRSKENEK 117
Query: 118 N 118
N
Sbjct: 118 N 118
>gi|289551832|ref|YP_003472736.1| Ribonuclease P protein component [Staphylococcus lugdunensis
HKU09-01]
gi|289181363|gb|ADC88608.1| Ribonuclease P protein component [Staphylococcus lugdunensis
HKU09-01]
Length = 113
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + + G+ F + N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQLIYRHGKSVANRQFVVYTYQN--QIAHFRLGISVSKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA+ A + E+ + ++ K
Sbjct: 59 IKRAIRENFKVHKQDIIAK--DIIVIARHPAKNMTTLEIQSSLEHVLKIAK 107
>gi|88658516|ref|YP_507257.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
gi|88599973|gb|ABD45442.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
Length = 119
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNS---NLLPRVGFTVTKKQGCAVE 56
+ + +KKR+ F + G G L+V N + RVGFTV+KK G AV
Sbjct: 3 LKGVVTVKKRKCFLFARNNGTFVGGNGLFLQVAKEPNGLLEDGCVRVGFTVSKKVGKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RN+++RR + + G+ Y+LI R + FKE+
Sbjct: 63 RNKVKRRFRVLAQSVLVKYAIKGYYYILIGNRYTPKVNFKEM 104
>gi|297588062|ref|ZP_06946706.1| ribonuclease P [Finegoldia magna ATCC 53516]
gi|297574751|gb|EFH93471.1| ribonuclease P [Finegoldia magna ATCC 53516]
Length = 113
Score = 86.0 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R++ +V K G+ FSL V N+ R+GF+VTKK G AVERNR
Sbjct: 1 MDKSVRLRDNREYNVVYKRGKTYYNRNFSLVVYNSKKGT---RIGFSVTKKYGNAVERNR 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L+E VRL K G D V+I K++ + +K+L + + R+
Sbjct: 58 IKRKLREIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQLESALLHVCRKASNKK 110
>gi|260584255|ref|ZP_05852002.1| ribonuclease P [Granulicatella elegans ATCC 700633]
gi|260157773|gb|EEW92842.1| ribonuclease P [Granulicatella elegans ATCC 700633]
Length = 128
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V G F + ++ +N + RVG +V+KK G AV RNR
Sbjct: 1 MRKSYRVKKEQEFQRVFHHGNSVANRQFVVYQIDKSNQSHF-RVGISVSKKLGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ +V + L+ D+++IA++ + + ++E+ + ++ K
Sbjct: 60 IKRLIR-SVLTELKPQLQSEIDFIVIARKPVVSMNYQEVKKCMMHVLKLGK 109
>gi|222152200|ref|YP_002561360.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
gi|254808070|sp|B9E8Z6|RNPA_MACCJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222121329|dbj|BAH18664.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
Length = 115
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + N+ N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNEDFQKIYKNGKSVANRQFIIY-RQKNSENEHFRLGISVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E+ E ++K D+++IA++ + + E+ ++ K
Sbjct: 60 IKRAIRESFTKHKEDIIKD--DFIVIARQPSKEMTTNEINKSLEHVMKIAK 108
>gi|331083517|ref|ZP_08332629.1| ribonuclease P protein component [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404210|gb|EGG83758.1| ribonuclease P protein component [Lachnospiraceae bacterium
6_1_63FAA]
Length = 123
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F LV K G + + + N + R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNNDFQLVYKKGTSYANRYLVMYIKENQLNR--NRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE--RVRRNKRSYYSGK 117
+ R ++E+ RL E G+D V++ + + + L + + R+ + RS + K
Sbjct: 59 LTRLIRESYRLNEEKFC-CGYDIVVVVRVNGKNQNYHSLESALLHLGRLHKVVRSKENEK 117
Query: 118 N 118
N
Sbjct: 118 N 118
>gi|188587645|ref|YP_001922720.1| ribonuclease P [Clostridium botulinum E3 str. Alaska E43]
gi|251781116|ref|ZP_04824036.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|238689656|sp|B2V1V3|RNPA_CLOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188497926|gb|ACD51062.1| ribonuclease P protein component [Clostridium botulinum E3 str.
Alaska E43]
gi|243085431|gb|EES51321.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 125
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVER 57
I LKK +F +V ++G+ L VL N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNIEFIIVYRRGKSFANKTLVLYVLKNKRNKDKDGIAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++ +R L E+ RL +LK G+D V +A+ + E +++
Sbjct: 62 SKCKRLLSESFRLNYNNILK-GYDCVFVARNPMRDSDYFETEKAMKNLIKKA 112
>gi|306830234|ref|ZP_07463417.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
gi|304427601|gb|EFM30698.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
Length = 123
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QQNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVDHVDFVVIARKGVETLEYAEMEKNLLHVLKLSK 108
>gi|296134498|ref|YP_003641745.1| ribonuclease P protein component [Thermincola sp. JR]
gi|296033076|gb|ADG83844.1| ribonuclease P protein component [Thermincola potens JR]
Length = 117
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F V G+ + L L N N RVGF+++KK G AV RNR+RR L
Sbjct: 6 IKKSSEFRKVYVSGKSVSNRYLVLYYLKNGQPN--SRVGFSISKKVGKAVVRNRIRRLLT 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRN 109
E RL + G D ++I + + + L F+ ++++
Sbjct: 64 EITRLSWHK-ISEGWDIIIIVRPRFVEKLCYTSLERAFINLIKKS 107
>gi|309799089|ref|ZP_07693342.1| ribonuclease P protein component [Streptococcus infantis SK1302]
gi|308117324|gb|EFO54747.1| ribonuclease P protein component [Streptococcus infantis SK1302]
Length = 123
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F+ + KKGE F + L NN RVG +V+KK G AV RN+
Sbjct: 1 MKKRFRVKKEKDFSAIFKKGESFANRKFVIYRLENN--EQHFRVGLSVSKKLGNAVMRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + + L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIL-IEHKNQLVENVDFVVIARKGVEILDYAEMEKNLLHVLKLSK 108
>gi|51894474|ref|YP_077165.1| ribonuclease P protein component [Symbiobacterium thermophilum IAM
14863]
gi|60390356|sp|Q67J29|RNPA_SYMTH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51858163|dbj|BAD42321.1| ribonuclease P protein component [Symbiobacterium thermophilum IAM
14863]
Length = 115
Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LK R F V +G + VL RVGF +K G AV RNR
Sbjct: 1 MKKAYRLKSRLAFQSVYAQGRSVANRAAVVHVLKQQAGTPT-RVGFAAGRKLGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+RRL+EAVRL ++ G+ V+IA++ AL +PF EL E R G
Sbjct: 60 AKRRLREAVRLLWPR-VRQGYYIVVIARQAALDMPFPELRQKVEELFERAGLLQREG 115
>gi|27469336|ref|NP_765973.1| ribonuclease P [Staphylococcus epidermidis ATCC 12228]
gi|57865941|ref|YP_187602.1| ribonuclease P [Staphylococcus epidermidis RP62A]
gi|242243257|ref|ZP_04797702.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251811362|ref|ZP_04825835.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|282874719|ref|ZP_06283598.1| ribonuclease P protein component [Staphylococcus epidermidis SK135]
gi|293367583|ref|ZP_06614236.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|29427693|sp|Q8CMN4|RNPA_STAES RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461260|sp|Q5HS37|RNPA_STAEQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27316886|gb|AAO06061.1|AE016752_94 ribonuclease P protein component [Staphylococcus epidermidis ATCC
12228]
gi|57636599|gb|AAW53387.1| ribonuclease P protein component [Staphylococcus epidermidis RP62A]
gi|242233206|gb|EES35518.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251805111|gb|EES57768.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|281296435|gb|EFA88950.1| ribonuclease P protein component [Staphylococcus epidermidis SK135]
gi|291318296|gb|EFE58689.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399916|gb|EFV88162.1| ribonuclease P protein component [Staphylococcus epidermidis
FRI909]
gi|329724155|gb|EGG60673.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU144]
gi|329736062|gb|EGG72335.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU045]
Length = 115
Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F + K G+ F + N + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQAIYKNGKSVANRQFVVYTYKNRDLKHF-RLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ + ++ K
Sbjct: 60 IKRAIRENFKVHKQNIIAK--DIIVIARQPAKDMNTLEIQSSLEHVLKIAK 108
>gi|224418477|ref|ZP_03656483.1| ribonuclease P protein component [Helicobacter canadensis MIT
98-5491]
gi|253827791|ref|ZP_04870676.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313142008|ref|ZP_07804201.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511197|gb|EES89856.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313131039|gb|EFR48656.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 108
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK ++ F +V K + P+F L N S R+GF V+KK G AV RN ++R
Sbjct: 1 MITLKSKKDFDIVYKSPKKWHNPYFILFFKENLKS---SRIGFCVSKKVGNAVCRNFVKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RL+ R ++ D VL+AK P+ L + + + R K
Sbjct: 58 RLRNLYRNSMSNLISG--DMVLLAKSGLDKAPYSTLQSSYNHALMRLK 103
>gi|331702708|ref|YP_004399667.1| ribonuclease P protein component [Lactobacillus buchneri NRRL
B-30929]
gi|329130051|gb|AEB74604.1| Ribonuclease P protein component [Lactobacillus buchneri NRRL
B-30929]
Length = 121
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + L+ N L RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQEVFETHNSVANRQFVVYSLDKPNQ-LHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ L + L+ D+++IA+ A + ++ + ++ K
Sbjct: 60 VKRRIRQSL-LELKPYLRQDVDFIVIARPAADQMSMSDVKASLIHVLKLAK 109
>gi|295697835|ref|YP_003591073.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
gi|295413437|gb|ADG07929.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
Length = 134
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R +F V ++G + N + R GF+V+KK G AV RN+
Sbjct: 1 MRAENRLRSREEFRRVFQRGVSVANREIVVYAWNRGDGGPW-RAGFSVSKKVGGAVVRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+EAV L G D V+IA+ F++L + V +
Sbjct: 60 VKRRLREAVW-GQGERLPTGWDLVVIARPGCDGASFEQLYRGVSDLVEKAA 109
>gi|329315433|gb|AEB89846.1| Ribonuclease P protein component [Staphylococcus aureus subsp.
aureus T0131]
Length = 115
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D +LIA++ A + ++ N ++ K
Sbjct: 60 IKRAIRENFKVHKSHILAK--DIILIARQPAKDMTTLQIQNSLEHVLKIAK 108
>gi|322374155|ref|ZP_08048689.1| ribonuclease P protein component [Streptococcus sp. C150]
gi|321277121|gb|EFX54192.1| ribonuclease P protein component [Streptococcus sp. C150]
Length = 111
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + LN + L RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRIKKEKDFKALFDAGHSVANRKFVVYCLNRDL--LHYRVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++E+ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQL--EHQDFVVIARKGVEDLSYQEIYSNLVHVLKIAK 107
>gi|167748058|ref|ZP_02420185.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|317472416|ref|ZP_07931741.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
gi|167652050|gb|EDR96179.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|316900136|gb|EFV22125.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
Length = 115
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + L+ ++F V K G+ + + L N R G +V+KK G +V R+R
Sbjct: 1 MKHYHSLRTTKEFQQVYKTGKSKANRYLVLYC--RENQLNYNRFGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR--RNKRSYY 114
+ R L+E+ RL E K G D V+IA+ F + + + ++ R KR
Sbjct: 59 VTRLLRESYRL-RESEFKQGFDLVVIARNTVKDEGFHTVESALLHLMKLHRLKRDEK 114
>gi|315659997|ref|ZP_07912855.1| ribonuclease P protein component [Staphylococcus lugdunensis
M23590]
gi|315494898|gb|EFU83235.1| ribonuclease P protein component [Staphylococcus lugdunensis
M23590]
Length = 115
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK F + + G+ F + N R+G +V+KK G AV RN+++R +
Sbjct: 8 RIKKNADFQLIYRHGKSVANRQFVVYTYQN--QIAHFRLGISVSKKIGNAVIRNKIKRAI 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+E ++ + ++ D ++IA+ A + E+ + ++ K
Sbjct: 66 RENFKVHKQDIIAK--DIIVIARHPAKNMTTLEIQSSLEHVLKIAK 109
>gi|146337897|ref|YP_001202945.1| ribonuclease P protein component [Bradyrhizobium sp. ORS278]
gi|146190703|emb|CAL74707.1| Ribonuclease P protein component (RNaseP protein) (Protein C5)
[Bradyrhizobium sp. ORS278]
Length = 135
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G P F ++ + + R+GFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFLAVADGVRANSPAFVVQRRERGDQGPV-RIGFTVTKKNGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
L+E V+ ++ DYVL+ +RDAL F+ + + +RR R +
Sbjct: 60 LRELVKRLDPLTMRPHSDYVLVGRRDALSRDFQTMLDDLTTALRRLDRPQARPQPR 115
>gi|15896969|ref|NP_350318.1| ribonuclease P [Clostridium acetobutylicum ATCC 824]
gi|21263956|sp|Q97CV8|RNPA_CLOAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15026845|gb|AAK81658.1|AE007868_14 RnpA, ribonuclease P protein component [Clostridium acetobutylicum
ATCC 824]
gi|325511146|gb|ADZ22782.1| ribonuclease P [Clostridium acetobutylicum EA 2018]
Length = 119
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++K +F V +KG+ L V N + R+G +V+KK G +V R+R++R +
Sbjct: 5 RIRKNAEFRRVYRKGKSFSNRLLVLYVYKNYILKDINRIGISVSKKVGKSVVRSRVKRLI 64
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E+ RL + LK GHD+V+IA+ + ++ + +
Sbjct: 65 GESYRLNSSN-LKKGHDFVIIARTACNGKRYSDIEDSIKNLFNKA 108
>gi|322421978|ref|YP_004201201.1| ribonuclease P protein component [Geobacter sp. M18]
gi|320128365|gb|ADW15925.1| ribonuclease P protein component [Geobacter sp. M18]
Length = 117
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L++R +F G P F L L RVGFTV+KK G AV RN +
Sbjct: 7 PKAERLRRRPEFLQFNDGASKMHTPHFLL--LWKIKDGCATRVGFTVSKKVGNAVVRNSI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+RRL+E R + D+ ++AK+ A + F ++ R ++ Y
Sbjct: 65 KRRLREFYRQNKSLFISA--DFNIVAKKGADLLDFHQISTELAAAFGRLRKKY 115
>gi|258406261|ref|YP_003199003.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
gi|257798488|gb|ACV69425.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
Length = 130
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+KR Q+ ++G F + VL R+G V+KK G AVERNR++R L
Sbjct: 11 RLRKRPQYLACYQRGRRYFLKRFIVYVLPRGKDGAGCRLGTAVSKKTGNAVERNRVKRLL 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+E RL + D V++AKR + + + + + ++R +R ++ +
Sbjct: 71 REFFRLHHQSWCLD-CDIVVVAKRSIVPGELTLQLVTDELTPLIKRLEREDTPARSTPCE 129
Query: 123 S 123
+
Sbjct: 130 T 130
>gi|15925703|ref|NP_373237.1| ribonuclease P [Staphylococcus aureus subsp. aureus Mu50]
gi|15928298|ref|NP_375831.1| ribonuclease P [Staphylococcus aureus subsp. aureus N315]
gi|21284360|ref|NP_647448.1| ribonuclease P [Staphylococcus aureus subsp. aureus MW2]
gi|49484908|ref|YP_042132.1| ribonuclease P [Staphylococcus aureus subsp. aureus MRSA252]
gi|49487490|ref|YP_044711.1| ribonuclease P [Staphylococcus aureus subsp. aureus MSSA476]
gi|57651107|ref|YP_187525.1| ribonuclease P [Staphylococcus aureus subsp. aureus COL]
gi|156981028|ref|YP_001443287.1| ribonuclease P [Staphylococcus aureus subsp. aureus Mu3]
gi|221141514|ref|ZP_03566007.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253316839|ref|ZP_04840052.1| ribonuclease P [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255007484|ref|ZP_05146085.2| ribonuclease P [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|262049468|ref|ZP_06022340.1| ribonuclease P [Staphylococcus aureus D30]
gi|262051899|ref|ZP_06024114.1| ribonuclease P [Staphylococcus aureus 930918-3]
gi|284023036|ref|ZP_06377434.1| ribonuclease P [Staphylococcus aureus subsp. aureus 132]
gi|295429296|ref|ZP_06821918.1| ribonuclease P [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275688|ref|ZP_06858195.1| ribonuclease P [Staphylococcus aureus subsp. aureus MR1]
gi|54039265|sp|P66689|RNPA_STAAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042179|sp|P66688|RNPA_STAAM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56749498|sp|Q6G5W3|RNPA_STAAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56749545|sp|Q6GD91|RNPA_STAAR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461249|sp|Q5HCI2|RNPA_STAAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228251|sp|A7X7A9|RNPA_STAA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13702670|dbj|BAB43810.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus N315]
gi|14248488|dbj|BAB58875.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205804|dbj|BAB96496.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MW2]
gi|49243037|emb|CAG41771.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245933|emb|CAG44414.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285293|gb|AAW37387.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus COL]
gi|156723163|dbj|BAF79580.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus Mu3]
gi|259160226|gb|EEW45255.1| ribonuclease P [Staphylococcus aureus 930918-3]
gi|259162465|gb|EEW47035.1| ribonuclease P [Staphylococcus aureus D30]
gi|285818376|gb|ADC38863.1| Ribonuclease P protein component [Staphylococcus aureus 04-02981]
gi|295127055|gb|EFG56699.1| ribonuclease P [Staphylococcus aureus subsp. aureus EMRSA16]
gi|302334327|gb|ADL24520.1| ribonuclease P [Staphylococcus aureus subsp. aureus JKD6159]
gi|312831051|emb|CBX35893.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129542|gb|EFT85534.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS03]
gi|315195225|gb|EFU25613.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS00]
gi|315197917|gb|EFU28250.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS01]
Length = 115
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 60 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 108
>gi|289167101|ref|YP_003445368.1| ribonuclease P [Streptococcus mitis B6]
gi|288906666|emb|CBJ21500.1| ribonuclease P [Streptococcus mitis B6]
Length = 123
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ +G L+ D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NVKGSLEENVDFVVIARKGVETLGYAEMEKNLLHVLKLSK 108
>gi|168187279|ref|ZP_02621914.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
gi|169294814|gb|EDS76947.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
Length = 112
Score = 84.9 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V ++G+ L + NNN + RVG +V+KK G +V R+R
Sbjct: 1 MKKNERIRKNVEFRRVYRRGKSYSNSLLVLYIFKNNNID-TSRVGISVSKKVGNSVVRSR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL LK +D V +A+ + +KE+ + ++R
Sbjct: 60 VKRLISESYRLNCNN-LKEKYDLVFVARNKSKDKTYKEIESSVTNLLKRA 108
>gi|55821783|ref|YP_140225.1| ribonuclease P [Streptococcus thermophilus LMG 18311]
gi|55823701|ref|YP_142142.1| ribonuclease P [Streptococcus thermophilus CNRZ1066]
gi|67461280|sp|Q5LY00|RNPA_STRT1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461286|sp|Q5M2K4|RNPA_STRT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|55737768|gb|AAV61410.1| ribonuclease P protein component [Streptococcus thermophilus LMG
18311]
gi|55739686|gb|AAV63327.1| ribonuclease P protein component [Streptococcus thermophilus
CNRZ1066]
Length = 111
Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + L+ N RVG +V+K G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYCLDRNL--PHFRVGLSVSKHLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQL--EHQDFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|197120419|ref|YP_002140846.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
gi|226736869|sp|B5EGY0|RNPA_GEOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|197089779|gb|ACH41050.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
Length = 116
Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +R +F +G + + L +L N RVGFTV+KK G AV RN ++
Sbjct: 7 PKAERLLRRPEFLQFNEGASKLHTQYFLVLLK-PNEGTGTRVGFTVSKKVGNAVVRNSIK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RRL+E R + D ++AK+ A + F ++ R ++ Y
Sbjct: 66 RRLREFYRQNKSLFISA--DINIVAKKGADVLDFHQISTELAAAFGRLRKKY 115
>gi|149007809|ref|ZP_01831405.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
gi|147760659|gb|EDK67632.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
Length = 123
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRIKREKDFKAIFKEGTSFANRKFVIYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVEALGYAEMEKNLLHVLKLSK 108
>gi|70727676|ref|YP_254592.1| ribonuclease P [Staphylococcus haemolyticus JCSC1435]
gi|123659002|sp|Q4L2Z1|RNPA_STAHJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68448402|dbj|BAE05986.1| ribonuclease P protein component [Staphylococcus haemolyticus
JCSC1435]
Length = 114
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + N+N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNTDFQTIYKRGKSVANRQFVVYTYNSNKD--HFRLGISVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKIHKEDIIAR--DIIVIARQPAKDMTTLEIQGSLEHVLKIAK 107
>gi|325686635|gb|EGD28661.1| ribonuclease P protein component [Streptococcus sanguinis SK72]
Length = 119
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKNAK 107
>gi|322388372|ref|ZP_08061975.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
gi|321140685|gb|EFX36187.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
Length = 144
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+KK + F + KKG F + L NN RVG +V+KK G AV RN+++RR+
Sbjct: 27 RVKKEKDFDAIFKKGASVANRKFVIYRLENN--ETHFRVGLSVSKKLGNAVTRNQIKRRI 84
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ + + L D+V+IA++ + + E+ + + +R K
Sbjct: 85 RHVL-IQNSNQLVDNVDFVVIARKGVELLEYAEIEKNLLHVLRLAK 129
>gi|57234198|ref|YP_181758.1| ribonuclease P protein component [Dehalococcoides ethenogenes 195]
gi|123618575|sp|Q3Z7P1|RNPA_DEHE1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|57224646|gb|AAW39703.1| ribonuclease P protein component [Dehalococcoides ethenogenes 195]
Length = 120
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + L +R +++ V G G ++ + N+ L RVGF V+KK G AVERNR
Sbjct: 1 MKHSNRLTRREEYSRVLASGGTYIGQLAVMKAVPNSLE--LSRVGFIVSKKVGGAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 59 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKANEKT 115
Query: 120 SRKS 123
S K+
Sbjct: 116 SSKA 119
>gi|307707728|ref|ZP_07644207.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|322378155|ref|ZP_08052640.1| ribonuclease P protein component [Streptococcus sp. M334]
gi|307616226|gb|EFN95420.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|321280885|gb|EFX57900.1| ribonuclease P protein component [Streptococcus sp. M334]
Length = 123
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLEYAEMEKNLLHVLKLSK 108
>gi|187934705|ref|YP_001887737.1| ribonuclease P [Clostridium botulinum B str. Eklund 17B]
gi|238691668|sp|B2TRI3|RNPA_CLOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|187722858|gb|ACD24079.1| ribonuclease P protein component [Clostridium botulinum B str.
Eklund 17B]
Length = 125
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVER 57
I LKK +F +V ++G+ L VL N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNIEFIIVYRRGKSFANKTLVLYVLKNKRNKDKDGIAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++ +R L E+ RL +LK G+D V +A+ + E +++
Sbjct: 62 SKCKRLLSESFRLNYNNILK-GYDCVFVARNPIRDSNYFETEKAMKNLIKKA 112
>gi|293364548|ref|ZP_06611271.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|306826339|ref|ZP_07459672.1| ribonuclease P protein component [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|307702546|ref|ZP_07639499.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|315611931|ref|ZP_07886849.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|322376168|ref|ZP_08050676.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|331265591|ref|YP_004325221.1| ribonuclease P [Streptococcus oralis Uo5]
gi|291316960|gb|EFE57390.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|304431452|gb|EFM34435.1| ribonuclease P protein component [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|307623892|gb|EFO02876.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|315315920|gb|EFU63954.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|321278850|gb|EFX55895.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|326682263|emb|CBY99880.1| ribonuclease P [Streptococcus oralis Uo5]
Length = 123
Score = 84.5 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKSFRVKREKDFKAIFKDGTSFANRKFVVYQLEN--QQNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ +G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHILQ-SVKGSLVEHVDFVVIARKGVETLEYAEMEKNLLHVLKLSK 108
>gi|225386356|ref|ZP_03756120.1| hypothetical protein CLOSTASPAR_00100 [Clostridium asparagiforme
DSM 15981]
gi|225047538|gb|EEG57784.1| hypothetical protein CLOSTASPAR_00100 [Clostridium asparagiforme
DSM 15981]
Length = 114
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + +G + V+ N R+G +V+KK G +V R+
Sbjct: 1 MKRFPSVKKNGEFQKIYRGGTSHANRLLVMYVMKN--GEESNRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL E ++ G + V++A+ A +K L + ++
Sbjct: 59 ITRLLREIFRLN-EDRIQTGLNIVVVARVAARDSDYKHLESAYLHL 103
>gi|151222825|ref|YP_001333647.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. Newman]
gi|150375625|dbj|BAF68885.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus str. Newman]
Length = 118
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 4 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 63 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 111
>gi|317057910|ref|YP_004106377.1| ribonuclease P protein component [Ruminococcus albus 7]
gi|315450179|gb|ADU23743.1| ribonuclease P protein component [Ruminococcus albus 7]
Length = 124
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ++K ++F + + N R+G T KK G AV RNR+
Sbjct: 1 MLFTQVIKDNKEFQRCYRSGRYTVCGYVCAYFY-PNGTPFNRLGITAGKKLGNAVCRNRV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
+R ++ A RLC E + G+D V + + DA E+ +
Sbjct: 60 KRIVRAAYRLC-ETEMPIGYDIVFVGRNDAADRTSAEIES 98
>gi|148989739|ref|ZP_01821048.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
gi|147924855|gb|EDK75938.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
Length = 127
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 8 KKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
K+ + F + K G F + L N + RVG +V+KK G AV RN+++RR++
Sbjct: 12 KREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQIKRRIRH 69
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
++ A+G L D+V+IA++ + + E+ + + ++ + Y G +++
Sbjct: 70 IIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLK-LSKIYREGNGSEKET 124
>gi|331002961|ref|ZP_08326473.1| ribonuclease P protein component [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413005|gb|EGG92380.1| ribonuclease P protein component [Lachnospiraceae oral taxon 107
str. F0167]
Length = 125
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK F V K G+ + V N S R+G +V+KK G +V R+
Sbjct: 1 MKSFPSLKSNSDFQRVYKNGKSYANKTLVMYVYRNELS--YNRIGISVSKKNGNSVVRHT 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+++E RL + K G D +++ + A + +L ++ ++ ++
Sbjct: 59 FARKIREIFRLN--KIEKKGLDIIVVVRVGADVSDYHKLEKAYLHLLKSHR 107
>gi|150019911|ref|YP_001312165.1| ribonuclease P [Clostridium beijerinckii NCIMB 8052]
gi|189043731|sp|A6M3M9|RNPA_CLOB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149906376|gb|ABR37209.1| ribonuclease P protein component [Clostridium beijerinckii NCIMB
8052]
Length = 125
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVER 57
I LKK +F +V K G+ + +L N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNFEFTIVYKRGKSFANELLVMYILKNRRNKDRDFLAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +R + E+ RL ++K G+D+V IA+ + E+ +++
Sbjct: 62 SRCKRLITESFRLNYNYIVK-GYDFVFIARNPLQSKSYFEVERAMRSLIKKA 112
>gi|261410108|ref|YP_003246349.1| ribonuclease P [Paenibacillus sp. Y412MC10]
gi|329925023|ref|ZP_08279967.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
gi|261286571|gb|ACX68542.1| ribonuclease P protein component [Paenibacillus sp. Y412MC10]
gi|328940142|gb|EGG36474.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
Length = 116
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F+ V + G+ F + RVG + +KK G AV RNR
Sbjct: 1 MHRKLRLRNRADFSRVYRHGKSFANHQFVVYWSRKKEVEQF-RVGVSCSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
MRR +KE VR +++H D + I ++ AL ++EL + +R++
Sbjct: 60 MRRLVKEIVRHHQHQIIEH-IDLIFIVRKGALDKSYQELEKSVLHVLRKS 108
>gi|307705715|ref|ZP_07642561.1| ribonuclease P protein component [Streptococcus mitis SK597]
gi|307709884|ref|ZP_07646332.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307710909|ref|ZP_07647335.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307617265|gb|EFN96439.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307619374|gb|EFN98502.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307620729|gb|EFN99819.1| ribonuclease P protein component [Streptococcus mitis SK597]
Length = 123
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLKLSK 108
>gi|315650196|ref|ZP_07903271.1| ribonuclease P protein component [Eubacterium saburreum DSM 3986]
gi|315487553|gb|EFU77861.1| ribonuclease P protein component [Eubacterium saburreum DSM 3986]
Length = 117
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N LK F V K G+ + V N + R+G +V+KK G +V R+
Sbjct: 1 MKNFPSLKSNTDFQRVYKNGKSYANKALVMYVYEN--ALTYNRIGISVSKKNGNSVVRHT 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+L+E RL + K G D +++ + A + +L + ++ ++ ++
Sbjct: 59 FVRKLREIFRLN--KIEKKGLDIIVVVRVGADVKDYHKLESAYLHLLKSHR 107
>gi|298290372|ref|YP_003692311.1| ribonuclease P protein component [Starkeya novella DSM 506]
gi|296926883|gb|ADH87692.1| ribonuclease P protein component [Starkeya novella DSM 506]
Length = 133
Score = 84.1 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ + KR+ F G L+ + + + PR+G TVTKK G AVERNR+RRR
Sbjct: 1 MHRIVKRKDFLAAASGLRANSGPLLLQGRDRAD-DTAPRIGLTVTKKHGNAVERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L+ AVR K G DYV++A+R AL PF +L + R K R S
Sbjct: 60 LRAAVRDALPRAGKDGFDYVIVARRAALGTPFADLVKDIERGIARLHSGRRPPKPAPRDS 119
>gi|302877175|ref|YP_003845808.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
gi|307687874|ref|ZP_07630320.1| ribonuclease P [Clostridium cellulovorans 743B]
gi|302580032|gb|ADL54044.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
Length = 128
Score = 84.1 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K +F V K G+ L + N + S R+G +V+KK G +V R+R++
Sbjct: 6 IRKNIEFRTVYKRGKSFSNYLLVLYIFKNKKNYDESGAYNRIGISVSKKVGKSVVRSRVK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + E+ RL + K+GHD+V+IA+ A + ++ + +
Sbjct: 66 RLINESYRLN-KHKFKYGHDFVVIARNPAHDKGYNDIEKALINLFIKA 112
>gi|228474208|ref|ZP_04058945.1| ribonuclease P protein component [Staphylococcus hominis SK119]
gi|228271903|gb|EEK13240.1| ribonuclease P protein component [Staphylococcus hominis SK119]
Length = 114
Score = 84.1 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F KKG+ F + L N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQKIYKKGKSVANRQFVVYTLKNEYE--HFRLGISVSKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKVHKQDMISK--DIIVIARQPAKNMSTLEIQGSLEHVLKIAK 107
>gi|325275327|ref|ZP_08141280.1| ribonuclease P [Pseudomonas sp. TJI-51]
gi|324099575|gb|EGB97468.1| ribonuclease P [Pseudomonas sp. TJI-51]
Length = 133
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + + G D V++A++ + EL HF + +R RS +
Sbjct: 75 LNQQSLA--GLDIVIVARKGLGEVENPELHQHFGKLWKRLARSRPAP 119
>gi|309390349|gb|ADO78229.1| ribonuclease P protein component [Halanaerobium praevalens DSM
2228]
Length = 109
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F V G+ + L R G +V+K+ G AV RN+++R
Sbjct: 1 MESLKKNKEFKKVYENGKSYATRNLVIYCLKYKKGK-KNRYGLSVSKRVGNAVVRNKLKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RL+E +R + G++ + IA+ + + + L +++
Sbjct: 60 RLREIIREFEKNEDFKGYEIIFIARNPVVQLNYHRLKKDVNRLLKKM 106
>gi|302388596|ref|YP_003824418.1| ribonuclease P protein component [Clostridium saccharolyticum WM1]
gi|302199224|gb|ADL06795.1| ribonuclease P protein component [Clostridium saccharolyticum WM1]
Length = 115
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK R F V G + + R+G +V++K G +V R+R
Sbjct: 1 MKHFNSIKKNRDFQEVYQNGRSLANKLLVMYI--KKTDRPETRIGISVSRKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E +++ G D V++ + A +K + + ++
Sbjct: 59 ITRLIRESFRLH-EDMVETGLDIVVVVRAAAKEENYKTIESAYLHL 103
>gi|239828711|ref|YP_002951335.1| ribonuclease P [Geobacillus sp. WCH70]
gi|259494109|sp|C5D9Z1|RNPA_GEOSW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|239809004|gb|ACS26069.1| ribonuclease P protein component [Geobacillus sp. WCH70]
Length = 116
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V ++G F + +L+ R+G +V+KK G AV RNR++R +++
Sbjct: 12 EFQEVFQRGTSMANRQFVIYMLDRPEQ-PYFRIGLSVSKKLGKAVVRNRIKRYIRQVFLE 70
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+ ++ DYV+IA+ + + E+ + +R+
Sbjct: 71 MKDDIMPQ-KDYVIIARLPVAEMTYFEVKKSLLHVLRKAGALKRD 114
>gi|87161522|ref|YP_495281.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88196668|ref|YP_501499.1| ribonuclease P [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148269144|ref|YP_001248087.1| ribonuclease P [Staphylococcus aureus subsp. aureus JH9]
gi|150395226|ref|YP_001317901.1| ribonuclease P [Staphylococcus aureus subsp. aureus JH1]
gi|161510922|ref|YP_001576581.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253730398|ref|ZP_04864563.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733840|ref|ZP_04868005.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH130]
gi|257424195|ref|ZP_05600624.1| ribonuclease P [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426872|ref|ZP_05603274.1| ribonuclease P [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429508|ref|ZP_05605895.1| ribonuclease P [Staphylococcus aureus subsp. aureus 68-397]
gi|257432155|ref|ZP_05608518.1| ribonuclease P [Staphylococcus aureus subsp. aureus E1410]
gi|257435116|ref|ZP_05611167.1| ribonuclease P [Staphylococcus aureus subsp. aureus M876]
gi|257793537|ref|ZP_05642516.1| ribonuclease P [Staphylococcus aureus A9781]
gi|258411157|ref|ZP_05681436.1| ribonuclease P [Staphylococcus aureus A9763]
gi|258420939|ref|ZP_05683873.1| ribonuclease P [Staphylococcus aureus A9719]
gi|258423239|ref|ZP_05686131.1| ribonuclease P [Staphylococcus aureus A9635]
gi|258438578|ref|ZP_05689801.1| ribonuclease P protein component [Staphylococcus aureus A9299]
gi|258443966|ref|ZP_05692304.1| ribonuclease P protein component [Staphylococcus aureus A8115]
gi|258446218|ref|ZP_05694378.1| ribonuclease P protein component [Staphylococcus aureus A6300]
gi|258449123|ref|ZP_05697229.1| ribonuclease P protein component [Staphylococcus aureus A6224]
gi|258451368|ref|ZP_05699399.1| ribonuclease P protein component [Staphylococcus aureus A5948]
gi|258454399|ref|ZP_05702367.1| ribonuclease P protein component [Staphylococcus aureus A5937]
gi|269204350|ref|YP_003283619.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ED98]
gi|282894278|ref|ZP_06302508.1| ribonuclease P [Staphylococcus aureus A8117]
gi|282902630|ref|ZP_06310523.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus C160]
gi|282907046|ref|ZP_06314894.1| ribonuclease P [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910025|ref|ZP_06317833.1| ribonuclease P [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282912273|ref|ZP_06320069.1| ribonuclease P [Staphylococcus aureus subsp. aureus WBG10049]
gi|282912913|ref|ZP_06320705.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M899]
gi|282920718|ref|ZP_06328437.1| ribonuclease P [Staphylococcus aureus A9765]
gi|282921289|ref|ZP_06329007.1| ribonuclease P [Staphylococcus aureus subsp. aureus C427]
gi|282922541|ref|ZP_06330231.1| ribonuclease P [Staphylococcus aureus subsp. aureus C101]
gi|282927749|ref|ZP_06335363.1| ribonuclease P [Staphylococcus aureus A10102]
gi|283767789|ref|ZP_06340704.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus H19]
gi|283959483|ref|ZP_06376924.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497966|ref|ZP_06665820.1| ribonuclease P [Staphylococcus aureus subsp. aureus 58-424]
gi|293511556|ref|ZP_06670250.1| ribonuclease P [Staphylococcus aureus subsp. aureus M809]
gi|293550165|ref|ZP_06672837.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M1015]
gi|294849827|ref|ZP_06790567.1| ribonuclease P [Staphylococcus aureus A9754]
gi|295406863|ref|ZP_06816667.1| ribonuclease P [Staphylococcus aureus A8819]
gi|297209453|ref|ZP_06925851.1| ribonuclease P [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297245898|ref|ZP_06929760.1| ribonuclease P [Staphylococcus aureus A8796]
gi|297589202|ref|ZP_06947843.1| ribonuclease P [Staphylococcus aureus subsp. aureus MN8]
gi|300911477|ref|ZP_07128926.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH70]
gi|304379947|ref|ZP_07362676.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|59800193|sp|P0A0H4|RNPA_STAAW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59800194|sp|P0A0H5|RNPA_STAAU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122538495|sp|Q2FUQ1|RNPA_STAA8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123484178|sp|Q2FDE7|RNPA_STAA3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043747|sp|A6U596|RNPA_STAA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043748|sp|A5IWD8|RNPA_STAA9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043749|sp|A8YYS2|RNPA_STAAT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|11514257|pdb|1D6T|A Chain A, Rnase P Protein From Staphylococcus Aureus
gi|7381167|gb|AAF61418.1|AF135268_1 ribonuclease P protein component [Staphylococcus aureus]
gi|87127496|gb|ABD22010.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204226|gb|ABD32036.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147742213|gb|ABQ50511.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus JH9]
gi|149947678|gb|ABR53614.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus JH1]
gi|160369731|gb|ABX30702.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253725878|gb|EES94607.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728143|gb|EES96872.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH130]
gi|257273213|gb|EEV05315.1| ribonuclease P [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276503|gb|EEV07954.1| ribonuclease P [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279989|gb|EEV10576.1| ribonuclease P [Staphylococcus aureus subsp. aureus 68-397]
gi|257283034|gb|EEV13166.1| ribonuclease P [Staphylococcus aureus subsp. aureus E1410]
gi|257285712|gb|EEV15828.1| ribonuclease P [Staphylococcus aureus subsp. aureus M876]
gi|257787509|gb|EEV25849.1| ribonuclease P [Staphylococcus aureus A9781]
gi|257840042|gb|EEV64507.1| ribonuclease P [Staphylococcus aureus A9763]
gi|257843129|gb|EEV67544.1| ribonuclease P [Staphylococcus aureus A9719]
gi|257846568|gb|EEV70590.1| ribonuclease P [Staphylococcus aureus A9635]
gi|257848137|gb|EEV72129.1| ribonuclease P protein component [Staphylococcus aureus A9299]
gi|257850850|gb|EEV74794.1| ribonuclease P protein component [Staphylococcus aureus A8115]
gi|257855044|gb|EEV77987.1| ribonuclease P protein component [Staphylococcus aureus A6300]
gi|257857556|gb|EEV80451.1| ribonuclease P protein component [Staphylococcus aureus A6224]
gi|257860898|gb|EEV83715.1| ribonuclease P protein component [Staphylococcus aureus A5948]
gi|257863493|gb|EEV86253.1| ribonuclease P protein component [Staphylococcus aureus A5937]
gi|262076640|gb|ACY12613.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ED98]
gi|269942299|emb|CBI50714.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus TW20]
gi|282314762|gb|EFB45148.1| ribonuclease P [Staphylococcus aureus subsp. aureus C101]
gi|282315704|gb|EFB46088.1| ribonuclease P [Staphylococcus aureus subsp. aureus C427]
gi|282323013|gb|EFB53332.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M899]
gi|282323969|gb|EFB54285.1| ribonuclease P [Staphylococcus aureus subsp. aureus WBG10049]
gi|282326091|gb|EFB56396.1| ribonuclease P [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282329945|gb|EFB59466.1| ribonuclease P [Staphylococcus aureus subsp. aureus Btn1260]
gi|282590509|gb|EFB95587.1| ribonuclease P [Staphylococcus aureus A10102]
gi|282594126|gb|EFB99114.1| ribonuclease P [Staphylococcus aureus A9765]
gi|282597089|gb|EFC02048.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus C160]
gi|282763323|gb|EFC03453.1| ribonuclease P [Staphylococcus aureus A8117]
gi|283461668|gb|EFC08752.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus H19]
gi|283471927|emb|CAQ51138.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ST398]
gi|283789075|gb|EFC27902.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919212|gb|EFD96288.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M1015]
gi|291096897|gb|EFE27155.1| ribonuclease P [Staphylococcus aureus subsp. aureus 58-424]
gi|291465514|gb|EFF08046.1| ribonuclease P [Staphylococcus aureus subsp. aureus M809]
gi|294823375|gb|EFG39804.1| ribonuclease P [Staphylococcus aureus A9754]
gi|294968328|gb|EFG44353.1| ribonuclease P [Staphylococcus aureus A8819]
gi|296885914|gb|EFH24849.1| ribonuclease P [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297177263|gb|EFH36516.1| ribonuclease P [Staphylococcus aureus A8796]
gi|297577713|gb|EFH96426.1| ribonuclease P [Staphylococcus aureus subsp. aureus MN8]
gi|300887656|gb|EFK82852.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH70]
gi|302752590|gb|ADL66767.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304341527|gb|EFM07437.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312436860|gb|ADQ75931.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus TCH60]
gi|320141416|gb|EFW33259.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144399|gb|EFW36164.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731746|gb|EGG68106.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus 21189]
gi|329732458|gb|EGG68808.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus 21193]
Length = 117
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|322391228|ref|ZP_08064700.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
gi|321145981|gb|EFX41370.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
Length = 123
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + K GE F + L N RVG +V+KK G AV RN+
Sbjct: 1 MRKSFRVKKEKDFDAIFKEGESVANRKFVIYRLENQQQ--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + ++ D+V+IA++ + + E+ + + ++ K
Sbjct: 59 IKRRIRHVLIENSNQIV-DNVDFVVIARKGVETLEYAEIEQNLLHVLKLAK 108
>gi|116628499|ref|YP_821118.1| ribonuclease P [Streptococcus thermophilus LMD-9]
gi|122266906|sp|Q03IQ0|RNPA_STRTD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116101776|gb|ABJ66922.1| RNase P protein component [Streptococcus thermophilus LMD-9]
gi|312279126|gb|ADQ63783.1| Ribonuclease P protein component [Streptococcus thermophilus ND03]
Length = 111
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + L+ N RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYCLDRNL--PHFRVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQL--ENQDFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|323350583|ref|ZP_08086245.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|322123265|gb|EFX94950.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|324992540|gb|EGC24461.1| ribonuclease P protein component [Streptococcus sanguinis SK405]
gi|324995931|gb|EGC27842.1| ribonuclease P protein component [Streptococcus sanguinis SK678]
gi|327460764|gb|EGF07099.1| ribonuclease P protein component [Streptococcus sanguinis SK1]
gi|327488847|gb|EGF20646.1| ribonuclease P protein component [Streptococcus sanguinis SK1058]
gi|332360027|gb|EGJ37841.1| ribonuclease P protein component [Streptococcus sanguinis SK1056]
Length = 119
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKHLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|325688909|gb|EGD30917.1| ribonuclease P protein component [Streptococcus sanguinis SK115]
gi|325695447|gb|EGD37347.1| ribonuclease P protein component [Streptococcus sanguinis SK150]
gi|332358081|gb|EGJ35913.1| ribonuclease P protein component [Streptococcus sanguinis SK49]
Length = 119
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|160941466|ref|ZP_02088801.1| hypothetical protein CLOBOL_06357 [Clostridium bolteae ATCC
BAA-613]
gi|158435612|gb|EDP13379.1| hypothetical protein CLOBOL_06357 [Clostridium bolteae ATCC
BAA-613]
Length = 114
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + + G + V+ R+G +V+KK G +V R+
Sbjct: 1 MKRFPSVKKNSEFQVIYRNGTSYANRLLVMYVMKTGEDE--NRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL +K G + +L+A+ A +K L ++
Sbjct: 59 ITRLLREIFRLNN-NRIKTGLNIILVARGAARQSDYKHLEGAYLHL 103
>gi|329117793|ref|ZP_08246510.1| ribonuclease P protein component [Streptococcus parauberis NCFD
2020]
gi|326908198|gb|EGE55112.1| ribonuclease P protein component [Streptococcus parauberis NCFD
2020]
Length = 121
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G E F + LN R+G +V K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFDGGESTANRKFVIYFLNEKEDQNHFRLGISVGKRLGNAVTRNA 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + +E + D+V+IA++ + ++E+ + ++
Sbjct: 61 VKRKIRHVIMEFSESLKPT--DFVIIARKGVEELEYQEVRQNLKHVLK 106
>gi|82752291|ref|YP_418032.1| ribonuclease P [Staphylococcus aureus RF122]
gi|123549491|sp|Q2YZB7|RNPA_STAAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|82657822|emb|CAI82277.1| ribonuclease P protein component [Staphylococcus aureus RF122]
Length = 117
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|242310497|ref|ZP_04809652.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239522895|gb|EEQ62761.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 109
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L ++ F +V + P F L N N RVGF V+KK G AV RN ++R
Sbjct: 1 MITLNTKKDFNIVYNSQKKWHNPHFILFFKENIKEN---RVGFCVSKKVGNAVCRNFIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RL+ R ++ D VL+AK + +K L NH+ + R K
Sbjct: 58 RLRSLYRASLPNLING--DMVLLAKNGLDKVDYKTLENHYKHALMRLK 103
>gi|306821797|ref|ZP_07455392.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550164|gb|EFM38160.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 108
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++KK +QF + +G+ + + N++ L ++G +++KK G AV RNR+R
Sbjct: 2 TFEMIKKDKQFRYIYSRGKSFANKKLVVYYIKNSDEKL--KIGISISKKVGKAVVRNRLR 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +KE +RL +K G+ + +A+ A + F+ + + ++R
Sbjct: 60 RLIKENIRLSTN--IKTGYSMIFLARVGADDLDFQTMRSSINHLLKR 104
>gi|327462708|gb|EGF09030.1| ribonuclease P protein component [Streptococcus sanguinis SK1057]
gi|332365879|gb|EGJ43636.1| ribonuclease P protein component [Streptococcus sanguinis SK355]
Length = 119
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KKG+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKKGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|238917979|ref|YP_002931496.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
gi|238873339|gb|ACR73049.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
Length = 121
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L+ ++F V + + + N R+G +V+KK G ++ R+R+
Sbjct: 10 KDFETLRSNQEFKKVYNNKKSFANKNLIMYISENGTD--TKRLGVSVSKKVGNSIVRHRL 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R ++EA RL + + G+DYV++A+ F E + ++ +K
Sbjct: 68 ARLIREAFRLSTD-CIPDGYDYVVVARASLKDKGFFETKESMIHLLKLHK 116
>gi|314935199|ref|ZP_07842552.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
gi|313656534|gb|EFS20273.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
Length = 114
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F KKG+ F + L N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQRIYKKGKSVANRQFVVYTLKNEYE--HFRLGISVSKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKVHKQDMISK--DIIVIARQPAKNMSTLEIQGSLEHVLKIAK 107
>gi|323439700|gb|EGA97418.1| ribonuclease P [Staphylococcus aureus O11]
gi|323443273|gb|EGB00890.1| ribonuclease P [Staphylococcus aureus O46]
Length = 117
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHMLAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|19745379|ref|NP_606515.1| ribonuclease P [Streptococcus pyogenes MGAS8232]
gi|21909711|ref|NP_663979.1| ribonuclease P [Streptococcus pyogenes MGAS315]
gi|28895092|ref|NP_801442.1| ribonuclease P [Streptococcus pyogenes SSI-1]
gi|50913584|ref|YP_059556.1| ribonuclease P [Streptococcus pyogenes MGAS10394]
gi|71902867|ref|YP_279670.1| ribonuclease P [Streptococcus pyogenes MGAS6180]
gi|71910021|ref|YP_281571.1| ribonuclease P [Streptococcus pyogenes MGAS5005]
gi|94989716|ref|YP_597816.1| ribonuclease P [Streptococcus pyogenes MGAS10270]
gi|94993598|ref|YP_601696.1| ribonuclease P [Streptococcus pyogenes MGAS10750]
gi|209558772|ref|YP_002285244.1| ribonuclease P [Streptococcus pyogenes NZ131]
gi|54039266|sp|P66691|RNPA_STRP8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042180|sp|P66690|RNPA_STRP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390309|sp|Q5XDZ0|RNPA_STRP6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123640563|sp|Q48VE1|RNPA_STRPM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228254|sp|Q1JIQ1|RNPA_STRPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228255|sp|Q1J8K9|RNPA_STRPF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741397|sp|B5XJN7|RNPA_STRPZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|19747486|gb|AAL97014.1| putative ribonuclease P protein component [Streptococcus pyogenes
MGAS8232]
gi|21903895|gb|AAM78782.1| putative ribonuclease P protein component [Streptococcus pyogenes
MGAS315]
gi|28810337|dbj|BAC63275.1| putative ribonuclease P protein component [Streptococcus pyogenes
SSI-1]
gi|50902658|gb|AAT86373.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10394]
gi|71801962|gb|AAX71315.1| ribonuclease P protein component [Streptococcus pyogenes MGAS6180]
gi|71852803|gb|AAZ50826.1| ribonuclease P protein component [Streptococcus pyogenes MGAS5005]
gi|94543224|gb|ABF33272.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10270]
gi|94547106|gb|ABF37152.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10750]
gi|209539973|gb|ACI60549.1| Ribonuclease P protein component [Streptococcus pyogenes NZ131]
Length = 119
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|160932430|ref|ZP_02079820.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
gi|156868389|gb|EDO61761.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
Length = 114
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 4 ICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
LK+ + F +G+ P V+ N + L R+GFT +KK G AV+RNR RR
Sbjct: 7 FTTLKENKDFRRLYHRGKSYVSPVLVTYVMKNRKAGL--RIGFTTSKKIGIAVQRNRSRR 64
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++EA RL A LK G+D+V +A+ F+ + + ++++
Sbjct: 65 IMREAFRLIAPE-LKTGYDFVFVARGKTPFVKCEAVKRAMTKQLKEA 110
>gi|282918067|ref|ZP_06325817.1| ribonuclease P [Staphylococcus aureus subsp. aureus D139]
gi|282318352|gb|EFB48712.1| ribonuclease P [Staphylococcus aureus subsp. aureus D139]
Length = 117
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F KKG F + NN + R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHF-RLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHILKIAK 110
>gi|167031022|ref|YP_001666253.1| ribonuclease P [Pseudomonas putida GB-1]
gi|254808083|sp|B0KEU7|RNPA_PSEPG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166857510|gb|ABY95917.1| ribonuclease P protein component [Pseudomonas putida GB-1]
Length = 134
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 16 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + + G D V++A++ I EL HF + +R RS +
Sbjct: 76 LNQQSLA--GLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTPAA 122
>gi|227508125|ref|ZP_03938174.1| ribonuclease P [Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227511150|ref|ZP_03941199.1| ribonuclease P [Lactobacillus buchneri ATCC 11577]
gi|227523337|ref|ZP_03953386.1| ribonuclease P [Lactobacillus hilgardii ATCC 8290]
gi|227085632|gb|EEI20944.1| ribonuclease P [Lactobacillus buchneri ATCC 11577]
gi|227089528|gb|EEI24840.1| ribonuclease P [Lactobacillus hilgardii ATCC 8290]
gi|227192354|gb|EEI72421.1| ribonuclease P [Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 126
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + L+ + L RVG +V KK G AV RN
Sbjct: 6 MRKSYRVKKEAEFQKVFETHNSVANRQFVVYTLDKPDQ-LHFRVGISVGKKIGNAVHRNW 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++A+ + L+ D+++IA+ + +++ + + +
Sbjct: 65 VKRRIRQAI-FELKPDLRQDVDFIVIARPSTDQMSMRDVKSSLIHVFK 111
>gi|163791582|ref|ZP_02185984.1| ribonuclease P [Carnobacterium sp. AT7]
gi|159873160|gb|EDP67262.1| ribonuclease P [Carnobacterium sp. AT7]
Length = 112
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + VL+ N+ L RVG +V KK G AV RN
Sbjct: 1 MRKTYRVKKEAEFQKVFHHGKSTANRQFVIYVLDKNDQ-LHFRVGISVGKKIGNAVMRNN 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + LK D+++IA++ + KE ++ K
Sbjct: 60 VKRRIRQSL-TELKPQLKAEKDFIVIARKPIADMTMKETKKSLTHVLKLAK 109
>gi|167770832|ref|ZP_02442885.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
gi|167666872|gb|EDS11002.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
Length = 111
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ I L ++F +G P + L N + R+G T TKK G AV+RNR
Sbjct: 1 MAKIQTLTLNKEFKRAYYRGRSFATPVLVVYALKNRSGE--NRLGLTATKKVGKAVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RR ++EA L E L G+D+VL+A+ F+ +++ +
Sbjct: 59 ARRVMREAFYLI-EQELAQGYDFVLVARVRTAFVSMQQVLEALRRACEK 106
>gi|26986753|ref|NP_742178.1| ribonuclease P [Pseudomonas putida KT2440]
gi|148550511|ref|YP_001270613.1| ribonuclease P [Pseudomonas putida F1]
gi|166991079|sp|A5WBB9|RNPA_PSEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24981343|gb|AAN65642.1|AE016190_8 ribonuclease P protein component [Pseudomonas putida KT2440]
gi|148514569|gb|ABQ81429.1| ribonuclease P protein component [Pseudomonas putida F1]
gi|313496416|gb|ADR57782.1| RnpA [Pseudomonas putida BIRD-1]
Length = 134
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 16 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L L G D V++A++ I EL HF + +R RS +
Sbjct: 76 LN--QQLLAGLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTP 120
>gi|60393731|sp|P0A167|RNPA_PSEPK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60393732|sp|P0A168|RNPA_PSEPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|581462|emb|CAA44415.1| unnamed protein product [Pseudomonas putida]
Length = 133
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V K P +L +L N PR+G + KK AV+RNR++R ++++ R
Sbjct: 15 RHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLMRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L L G D V++A++ I EL HF + +R RS +
Sbjct: 75 LN--QQLLAGLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTP 119
>gi|104784449|ref|YP_610947.1| ribonuclease P [Pseudomonas entomophila L48]
gi|122401166|sp|Q1I2H2|RNPA_PSEE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|95113436|emb|CAK18164.1| ribonuclease P protein component [Pseudomonas entomophila L48]
Length = 133
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S L R F V K P +L +L N PR+G + KK AV+RNR+
Sbjct: 7 SRDKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++++ RL + G D V++A++ + EL HF + +R RS S
Sbjct: 67 KRLMRDSFRLN--QQMLAGLDIVIVARKGLGEVENPELHQHFGKLWKRLVRSRPSP 120
>gi|148985979|ref|ZP_01819032.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|169833324|ref|YP_001695393.1| ribonuclease P [Streptococcus pneumoniae Hungary19A-6]
gi|238688311|sp|B1I998|RNPA_STRPI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147921952|gb|EDK73077.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|168995826|gb|ACA36438.1| ribonuclease P protein component [Streptococcus pneumoniae
Hungary19A-6]
gi|301800798|emb|CBW33450.1| ribonuclease P protein component [Streptococcus pneumoniae OXC141]
Length = 123
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLKLSK 108
>gi|322515971|ref|ZP_08068911.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
gi|322125570|gb|EFX96905.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
Length = 111
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + LN + RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYSLNRDL--PHFRVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQL--EHQDFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|94987839|ref|YP_595940.1| ribonuclease P [Streptococcus pyogenes MGAS9429]
gi|94991719|ref|YP_599818.1| ribonuclease P [Streptococcus pyogenes MGAS2096]
gi|166228252|sp|Q1JDN4|RNPA_STRPB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228253|sp|Q1JNK3|RNPA_STRPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|94541347|gb|ABF31396.1| ribonuclease P protein component [Streptococcus pyogenes MGAS9429]
gi|94545227|gb|ABF35274.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS2096]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + LN RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKCEKDFQAIFKDGKSTANRKFVIYHLNRGQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + G D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMAL--GYQLKSEDFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|15674428|ref|NP_268602.1| ribonuclease P [Streptococcus pyogenes M1 GAS]
gi|21263962|sp|Q9A1J4|RNPA_STRP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13621522|gb|AAK33323.1| putative ribonuclease P protein component [Streptococcus pyogenes
M1 GAS]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVHSLEYQELQQNLHHVLK 104
>gi|306828049|ref|ZP_07461314.1| ribonuclease P protein component [Streptococcus pyogenes ATCC
10782]
gi|304429765|gb|EFM32809.1| ribonuclease P protein component [Streptococcus pyogenes ATCC
10782]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLGYQELQQNLHHVLK 104
>gi|139473066|ref|YP_001127781.1| ribonuclease P [Streptococcus pyogenes str. Manfredo]
gi|166228256|sp|A2RCF8|RNPA_STRPG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134271312|emb|CAM29530.1| ribonuclease P protein component [Streptococcus pyogenes str.
Manfredo]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRSQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|22536591|ref|NP_687442.1| ribonuclease P [Streptococcus agalactiae 2603V/R]
gi|76788039|ref|YP_329127.1| ribonuclease P [Streptococcus agalactiae A909]
gi|76799480|ref|ZP_00781621.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77407079|ref|ZP_00784082.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
gi|77412331|ref|ZP_00788644.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77414748|ref|ZP_00790875.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|29427732|sp|Q8E1E7|RNPA_STRA5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123602349|sp|Q3K2X6|RNPA_STRA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|22533427|gb|AAM99314.1|AE014210_4 ribonuclease P protein component [Streptococcus agalactiae 2603V/R]
gi|76563096|gb|ABA45680.1| ribonuclease P protein component [Streptococcus agalactiae A909]
gi|76585170|gb|EAO61787.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77159198|gb|EAO70382.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|77161620|gb|EAO72618.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77174310|gb|EAO77176.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
Length = 109
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEKEQK--HFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 104
>gi|148258510|ref|YP_001243095.1| ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
gi|146410683|gb|ABQ39189.1| Ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
Length = 136
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G P F ++ + + R+GFTVTK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFLAVADGARANSPAFVVQRRERADQGPV-RIGFTVTKNNGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L+E V+ ++ DYVLI +RDAL F+ + + +RR R K RK
Sbjct: 60 LRELVKRLDPLSMRPHSDYVLIGRRDALSRDFQTMLDDLQTTLRRLDRPQ--AKPQPRKP 117
>gi|209886639|ref|YP_002290496.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
gi|209874835|gb|ACI94631.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
Length = 132
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F +G P F ++ ++ R+GFTV+KK G A ERNR+RRR
Sbjct: 1 MDRLKKRADFLAAAQGPRAARPAFVVQARLRDDPGPT-RIGFTVSKKVGTATERNRVRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L++ VR G DYV++ +R+AL F+ L F + ++ +
Sbjct: 60 LRDMVRQAGLGTAPSPRDYVIVGRRNALNREFQVLIADFRAALAHLSKAKGA 111
>gi|307128243|ref|YP_003880274.1| ribonuclease P protein component [Streptococcus pneumoniae 670-6B]
gi|306485305|gb|ADM92174.1| ribonuclease P protein component [Streptococcus pneumoniae 670-6B]
Length = 123
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVIYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVEALGYAEMEKNLLHVLKLSK 108
>gi|18311641|ref|NP_563575.1| ribonuclease P [Clostridium perfringens str. 13]
gi|110799284|ref|YP_697350.1| ribonuclease P [Clostridium perfringens ATCC 13124]
gi|110803108|ref|YP_699908.1| ribonuclease P [Clostridium perfringens SM101]
gi|168207738|ref|ZP_02633743.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|168211553|ref|ZP_02637178.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|168214847|ref|ZP_02640472.1| ribonuclease P protein component [Clostridium perfringens CPE str.
F4969]
gi|168218055|ref|ZP_02643680.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
gi|169343434|ref|ZP_02864434.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|182626427|ref|ZP_02954180.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|21263941|sp|Q8XH26|RNPA_CLOPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123049533|sp|Q0TLZ0|RNPA_CLOP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123341460|sp|Q0SPP9|RNPA_CLOPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|18146325|dbj|BAB82365.1| ribonuclease P protein component [Clostridium perfringens str. 13]
gi|110673931|gb|ABG82918.1| ribonuclease P protein component [Clostridium perfringens ATCC
13124]
gi|110683609|gb|ABG86979.1| ribonuclease P protein component [Clostridium perfringens SM101]
gi|169298386|gb|EDS80475.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|170660930|gb|EDT13613.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|170710468|gb|EDT22650.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|170713722|gb|EDT25904.1| ribonuclease P protein component [Clostridium perfringens CPE str.
F4969]
gi|177908301|gb|EDT70854.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|182379925|gb|EDT77404.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
Length = 125
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVER 57
+ L+K +F V ++G+ L V N + +VG +V+KK G +V R
Sbjct: 2 LLSLRKNNEFRTVYRRGKSYANDLLVLYVYPNRKNVTKDGERFNKVGVSVSKKVGKSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R++R + E RL + LK G+D+V IA+ FK++ +++
Sbjct: 62 SRVKRLILENYRLNS-SELKEGYDFVFIARVAINGKDFKQVGKAMNNLIKKA 112
>gi|328944627|gb|EGG38788.1| ribonuclease P protein component [Streptococcus sanguinis SK1087]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKKLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|319940012|ref|ZP_08014366.1| ribonuclease P protein component [Streptococcus anginosus 1_2_62CV]
gi|319810726|gb|EFW07053.1| ribonuclease P protein component [Streptococcus anginosus 1_2_62CV]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKSEKDFNAIFKSGQSFANRKFVIYTLEKKQK--HFRVGISVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + D+V+IA++ F+ ++EL + + ++ K
Sbjct: 59 IKRRIRHVLIAHQAELAT--LDFVVIARKGVEFLTYQELEQNLLHVLKIAK 107
>gi|291461018|ref|ZP_06026478.2| ribonuclease P protein component [Fusobacterium periodonticum ATCC
33693]
gi|291379417|gb|EFE86935.1| ribonuclease P protein component [Fusobacterium periodonticum ATCC
33693]
Length = 112
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + K + +SL N N R GF +KK G A RNR++R
Sbjct: 2 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF-NKNKLDYSRFGFVASKKIGKAFCRNRIKRL 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA----LFIPFKELCNHFVERVRRNK 110
+E +RL E L +D +++AK+ A I ++++ ++ +K
Sbjct: 61 FREYIRLNIEK-LNDNYDIIIVAKKKAGEIIETIKYQDIEKDLNRILKNSK 110
>gi|229826867|ref|ZP_04452936.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
gi|229788485|gb|EEP24599.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
Length = 117
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK R+F V G+ + + V NN R+G +V+KK G +V R+R R ++
Sbjct: 6 LKNSREFKRVYDFGKSYANKYLVMYVYNNETEE--NRIGISVSKKVGNSVIRHRATRLIR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
E+VRL E ++ G+D V+IA+ +K++ + ++
Sbjct: 64 ESVRLN-EEKIRKGYDIVIIARGSIKDKKYKDVESAYI 100
>gi|85858987|ref|YP_461189.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
gi|123516277|sp|Q2LSG2|RNPA_SYNAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85722078|gb|ABC77021.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++KRR + + + G+ F++ V N+ PR+G TVTKK G AV+RNR
Sbjct: 6 LKKSERIRKRRSYLQIYQHGKRSFTKHFTIVVSENDLD--FPRLGMTVTKKIGNAVKRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R ++E RL + K D V+IAK + + + ++C + +
Sbjct: 64 IKRLIREFFRLNKDRF-KASQDIVIIAKGNTSSMKYADVCRELGVLLTK 111
>gi|108805994|ref|YP_645931.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
gi|108767237|gb|ABG06119.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
Length = 114
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L +F V + G + +G FS+ N+ PR+G +V++K G AV RN +RRR
Sbjct: 7 TRLTDSPEFERVYRQGRVYRGRLFSVHAFPNDLG--HPRLGLSVSRKVGGAVTRNTVRRR 64
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L+E + G + G D+V+ A+ A F+EL F +RR
Sbjct: 65 LREVF-FASVGEGEGGLDFVISARPAAAEASFQELLAEFGRALRR 108
>gi|324989806|gb|EGC21749.1| ribonuclease P protein component [Streptococcus sanguinis SK353]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K+G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKHLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|325678536|ref|ZP_08158147.1| ribonuclease P protein component [Ruminococcus albus 8]
gi|324109755|gb|EGC03960.1| ribonuclease P protein component [Ruminococcus albus 8]
Length = 127
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ++K + F + + N R+G T KK G AV RNR+
Sbjct: 1 MLFTQVIKDNKAFQRCYRSGRFAVCGYVCAYFY-PNGTAYNRLGITAGKKLGNAVCRNRV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++ A RLC E + G+D V + + DA E+ + R+
Sbjct: 60 KRIVRAAYRLC-ESEMPIGYDIVFVGRNDAAERTSAEIESFIRGRL 104
>gi|327398262|ref|YP_004339131.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
gi|327180891|gb|AEA33072.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
Length = 112
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 11 RQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
++F V KG PFF L L + + +VG +KK G AV+RNR +RRL+E VR
Sbjct: 14 KEFKEVYEKGGKVVTPFFVLFTLKDKEN---LKVGVVASKKIGKAVKRNRAKRRLREIVR 70
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
L L + VLIA++ L F+ + N F+ +++
Sbjct: 71 LSQP-FLPNNIWIVLIARKAVLEADFQRMQNLFLNKLK 107
>gi|327472486|gb|EGF17917.1| ribonuclease P protein component [Streptococcus sanguinis SK408]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K+G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|254510261|ref|ZP_05122328.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
gi|221533972|gb|EEE36960.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
Length = 90
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 28 SLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
++ ++ RVGFT +KK G AV RNR +RRL+EA R + G DYVLI
Sbjct: 2 MVQARKRGTDEIVGIRVGFTCSKKVGNAVARNRAKRRLREAARTVLSTQGRDGWDYVLIG 61
Query: 87 KRDA-LFIPFKELCNHFVERVRRNKRSYY 114
+ + P+ L + +R+ +
Sbjct: 62 RAEVTATRPYDALLDDLRYALRKLHDNRK 90
>gi|315644293|ref|ZP_07897463.1| ribonuclease P protein component [Paenibacillus vortex V453]
gi|315280668|gb|EFU43957.1| ribonuclease P protein component [Paenibacillus vortex V453]
Length = 128
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+ R F+ V + G+ F + RVG + +KK G AV RNRMRR +
Sbjct: 18 RLRNRADFSRVYRHGKSFANHQFVVYWSRKKEVEQF-RVGVSCSKKIGNAVVRNRMRRLV 76
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
KE VR +++H D + I ++ AL ++EL + +R++
Sbjct: 77 KEIVRHHQHQIIEH-IDLIFIVRKGALDKSYQELEKSVLHVLRKS 120
>gi|332983467|ref|YP_004464908.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
gi|332701145|gb|AEE98086.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
Length = 118
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L+ R++ +V + G+ L N SN+ R GF+V+KK G +V RNR+
Sbjct: 5 NKDNRLRHNREYRVVYRAGKSVANKDMVLYFAKNKQSNV--RAGFSVSKKIGKSVVRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR +KEA RL +K G+D + IA+ + + ++ ++ +++
Sbjct: 63 RRLIKEAFRLHI-NDIKPGYDLIFIARTGNKSLKYADVERAVLDVLKKA 110
>gi|77409736|ref|ZP_00786395.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
gi|77171650|gb|EAO74860.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
Length = 109
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEKEQK--HFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 VKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 104
>gi|150021504|ref|YP_001306858.1| ribonuclease P protein component [Thermosipho melanesiensis BI429]
gi|149794025|gb|ABR31473.1| ribonuclease P protein component [Thermosipho melanesiensis BI429]
Length = 131
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK R+ F + G+ + P+F + L N R GF+V KK G AV RNR+
Sbjct: 12 KKYERLKLRKDFKRLYETGKSIQVPYFVIIYLKNGFE--YSRFGFSVRKKFGKAVRRNRL 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK----RDALFIPFKELCNHFVERVRR 108
+R ++E +R + V+ G+DY++IA+ RD I ++ ++ R
Sbjct: 70 KRWMREVIRTN-KYVIPKGYDYLIIARKHLSRDFEKITYQHFKEELLKLFAR 120
>gi|224475496|ref|YP_002633102.1| ribonuclease P [Staphylococcus carnosus subsp. carnosus TM300]
gi|254808087|sp|B9DI94|RNPA_STACT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222420103|emb|CAL26917.1| putative ribonuclease P protein component [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 115
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F ++G+ F + ++ + ++G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQAIYRRGKSVANRQFVIYMMP-DKGLTHFKLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + +L ++IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKDDMLPRN--IIVIARHPAKDMTVLEIQKSLEHVLKVAK 108
>gi|327389036|gb|EGE87383.1| ribonuclease P protein component [Streptococcus pneumoniae GA04375]
Length = 123
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLKSSK 108
>gi|302672312|ref|YP_003832272.1| ribonuclease P protein component RnpA [Butyrivibrio proteoclasticus
B316]
gi|302396785|gb|ADL35690.1| ribonuclease P protein component RnpA [Butyrivibrio proteoclasticus
B316]
Length = 116
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F V G+ + L V N S+ ++G + +KK G ++ R+R R ++
Sbjct: 7 MKKTSEFRNVYENGKSYANKYIVLYVWENGRSD--NKLGISCSKKIGNSIVRHRFARLVR 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
E+ RL E V G D V++A+ A F ++ + + + G
Sbjct: 65 ESYRL-QENVFNSGLDIVIVARACARDASFFDIQESLLSLAGKARIKKNGG 114
>gi|229824629|ref|ZP_04450698.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC 51271]
gi|229786000|gb|EEP22114.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC 51271]
Length = 115
Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V + L V RVG +V K+ G AV RN+
Sbjct: 1 MKKAYRIKKEREFQHVYHHAQTYANRQLVLYVYPKPEQAHF-RVGLSVGKRIGNAVMRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R L+++++ E + H +DY+LIA+ D + +
Sbjct: 60 VKRYLRQSLQ-DLEHEIPHEYDYLLIARPDIKDKDQATVRQSLRHVM 105
>gi|269122723|ref|YP_003310900.1| ribonuclease P protein component [Sebaldella termitidis ATCC 33386]
gi|268616601|gb|ACZ10969.1| ribonuclease P protein component [Sebaldella termitidis ATCC 33386]
Length = 107
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F+ V KG+ + + + LNNN + R GF +KK G AV+RNR++R
Sbjct: 1 MITLKKEKEFSKVYQKGQKKHTKYVIIIFLNNNLNE--KRFGFVASKKTGNAVKRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERV 106
+E VRL K +DY++I K + + + + ++ +
Sbjct: 59 LFREVVRLNY-NKFKENYDYIIIGKAVLKDNIDSLKYDTMEKDILKGI 105
>gi|15903895|ref|NP_359445.1| ribonuclease P [Streptococcus pneumoniae R6]
gi|116515893|ref|YP_817258.1| ribonuclease P [Streptococcus pneumoniae D39]
gi|148992120|ref|ZP_01821894.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|148998806|ref|ZP_01826243.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|149003815|ref|ZP_01828643.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|149011895|ref|ZP_01833043.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|149023610|ref|ZP_01836113.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|168484115|ref|ZP_02709067.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|168487014|ref|ZP_02711522.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|168489935|ref|ZP_02714134.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|168492463|ref|ZP_02716606.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|168494638|ref|ZP_02718781.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|168576993|ref|ZP_02722827.1| ribonuclease P protein component [Streptococcus pneumoniae MLV-016]
gi|182684978|ref|YP_001836725.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|194397253|ref|YP_002038623.1| ribonuclease P [Streptococcus pneumoniae G54]
gi|221232759|ref|YP_002511913.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225855531|ref|YP_002737043.1| ribonuclease P [Streptococcus pneumoniae JJA]
gi|225857615|ref|YP_002739126.1| ribonuclease P [Streptococcus pneumoniae P1031]
gi|225859798|ref|YP_002741308.1| ribonuclease P [Streptococcus pneumoniae 70585]
gi|225861861|ref|YP_002743370.1| ribonuclease P [Streptococcus pneumoniae Taiwan19F-14]
gi|237650611|ref|ZP_04524863.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974]
gi|237821071|ref|ZP_04596916.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974M2]
gi|298229606|ref|ZP_06963287.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254932|ref|ZP_06978518.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501540|ref|YP_003723480.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|303254946|ref|ZP_07341027.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|303260532|ref|ZP_07346499.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|303262889|ref|ZP_07348825.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|303265200|ref|ZP_07351112.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|303266565|ref|ZP_07352451.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|303268651|ref|ZP_07354442.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|307068653|ref|YP_003877619.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|29427716|sp|Q8DN92|RNPA_STRR6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122277896|sp|Q04ID0|RNPA_STRP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741396|sp|B5E2W2|RNPA_STRP4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691137|sp|B2IML6|RNPA_STRPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808089|sp|C1CA87|RNPA_STRP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808090|sp|B8ZPA3|RNPA_STRPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808092|sp|C1CGX2|RNPA_STRZJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808093|sp|C1CMY8|RNPA_STRZP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808094|sp|C1CTU8|RNPA_STRZT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15459543|gb|AAL00656.1| Ribonuclease P - protein component [Streptococcus pneumoniae R6]
gi|116076469|gb|ABJ54189.1| ribonuclease P protein component [Streptococcus pneumoniae D39]
gi|147755367|gb|EDK62417.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|147758149|gb|EDK65152.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|147763850|gb|EDK70783.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|147929169|gb|EDK80180.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|147929709|gb|EDK80700.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|172042643|gb|EDT50689.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|182630312|gb|ACB91260.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|183570055|gb|EDT90583.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|183571675|gb|EDT92203.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|183573382|gb|EDT93910.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|183575475|gb|EDT96003.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|183577346|gb|EDT97874.1| ribonuclease P protein component [Streptococcus pneumoniae MLV-016]
gi|194356920|gb|ACF55368.1| ribonuclease P protein component [Streptococcus pneumoniae G54]
gi|220675221|emb|CAR69810.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225720682|gb|ACO16536.1| ribonuclease P protein component [Streptococcus pneumoniae 70585]
gi|225723063|gb|ACO18916.1| ribonuclease P protein component [Streptococcus pneumoniae JJA]
gi|225726113|gb|ACO21965.1| ribonuclease P protein component [Streptococcus pneumoniae P1031]
gi|225727111|gb|ACO22962.1| ribonuclease P protein component [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237135|gb|ADI68266.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|301794977|emb|CBW37441.1| ribonuclease P protein component [Streptococcus pneumoniae INV104]
gi|301802720|emb|CBW35489.1| ribonuclease P protein component [Streptococcus pneumoniae INV200]
gi|302598082|gb|EFL65147.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|302635972|gb|EFL66471.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|302638330|gb|EFL68798.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|302641816|gb|EFL72172.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|302643902|gb|EFL74163.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|302645281|gb|EFL75516.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|306410190|gb|ADM85617.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|332071836|gb|EGI82326.1| ribonuclease P protein component [Streptococcus pneumoniae GA17570]
gi|332199117|gb|EGJ13197.1| ribonuclease P protein component [Streptococcus pneumoniae GA41317]
gi|332199189|gb|EGJ13268.1| ribonuclease P protein component [Streptococcus pneumoniae GA47368]
gi|332199473|gb|EGJ13549.1| ribonuclease P protein component [Streptococcus pneumoniae GA47901]
Length = 123
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ + Y G
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLK-LSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|313111479|ref|ZP_07797280.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
gi|310883782|gb|EFQ42376.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
Length = 134
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 10 RLLTTRQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R E + G D V+IA++ + EL F + +R R+
Sbjct: 70 RESFRHNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRP 117
>gi|237738567|ref|ZP_04569048.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
gi|229424050|gb|EEO39097.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
Length = 111
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + K + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF-NKNKLDYSRFGFVASKKIGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI----PFKELCNHFVERVRRNK 110
+E +RL E L +D +++AK+ A + ++++ + +K
Sbjct: 60 FREYIRLNIEK-LNANYDIIIVAKKKAGEMIETIKYQDIEKDLNRVFKNSK 109
>gi|49077256|gb|AAT49655.1| PA5569 [synthetic construct]
Length = 136
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E + G D V+IA++ + EL F + +R R+
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRP 118
>gi|302393079|ref|YP_003828899.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
gi|302205156|gb|ADL13834.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
Length = 117
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L K QF V G + +L R+GF+V+KK G AV RNR+
Sbjct: 9 PKSERLTKTHQFQQVYNHGYSIANNLIVMYMLKKKQKQR--RIGFSVSKKIGNAVVRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R LKE R ++ D VLI ++ ++E+ + + K
Sbjct: 67 KRILKEIYRRNKNKLI-TNIDLVLIGRKRISDSSYQEIKRAVFDLFEQAK 115
>gi|327468458|gb|EGF13943.1| ribonuclease P protein component [Streptococcus sanguinis SK330]
Length = 119
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K+G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEQLDYHQVEQNLLHVLKIAK 107
>gi|332071755|gb|EGI82247.1| ribonuclease P protein component [Streptococcus pneumoniae GA17545]
Length = 123
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKN--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ + Y G
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLK-LSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|328545249|ref|YP_004305358.1| ribonuclease P protein component [polymorphum gilvum SL003B-26A1]
gi|326414991|gb|ADZ72054.1| Ribonuclease P protein component [Polymorphum gilvum SL003B-26A1]
Length = 136
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR +F V KG F L+ L + R G+TVTK+ G AVERNR+RRR
Sbjct: 1 MKTLKKRTEFLAVAKGGRADRRAFVLQGLRRGDDRGT-RFGYTVTKRTGNAVERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L+ AV + G + G DYVLI +R AL +PF +L + + +
Sbjct: 60 LRAAVAALSPGDVPEGADYVLIGRRSALDMPFADLVRDLRSGLAKALDPNSA 111
>gi|315222385|ref|ZP_07864290.1| ribonuclease P protein component [Streptococcus anginosus F0211]
gi|315188546|gb|EFU22256.1| ribonuclease P protein component [Streptococcus anginosus F0211]
Length = 119
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKSEKDFNAIFKSGQSFANRKFVIYTLEKKQK--HFRVGISVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + + D+V+IA++ + ++EL + + ++ K
Sbjct: 59 IKRRIRHVLIVHQAELAT--LDFVVIARKGVEILTYQELEQNLLHVLKIAK 107
>gi|25010516|ref|NP_734911.1| ribonuclease P [Streptococcus agalactiae NEM316]
gi|29427743|sp|Q8E6W5|RNPA_STRA3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23094869|emb|CAD46087.1| Unknown [Streptococcus agalactiae NEM316]
Length = 109
Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEKEQK--HFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELNYQALEKNLIHVLK 104
>gi|24378834|ref|NP_720789.1| ribonuclease P [Streptococcus mutans UA159]
gi|290581140|ref|YP_003485532.1| putative ribonuclease P protein component [Streptococcus mutans
NN2025]
gi|29427729|sp|Q8DVX4|RNPA_STRMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24376710|gb|AAN58095.1|AE014881_9 putative ribonuclease P protein component [Streptococcus mutans
UA159]
gi|254998039|dbj|BAH88640.1| putative ribonuclease P protein component [Streptococcus mutans
NN2025]
Length = 119
Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + G F + L + S RVG +V K+ G AV RN
Sbjct: 1 MKKAYRVKSDKDFQAIFTEGRSVANRKFVVYSLEKDQS--HYRVGLSVGKRLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+L+ + + D+V+IA++ + + + + V ++ + Y G
Sbjct: 59 IKRKLRHVLMELGPYLGTQ--DFVVIARKGVEELDYSTMKKNLVHVLK-LAKLYQEGSIR 115
Query: 120 SRK 122
++
Sbjct: 116 EKE 118
>gi|15600762|ref|NP_254256.1| ribonuclease P [Pseudomonas aeruginosa PAO1]
gi|107104670|ref|ZP_01368588.1| hypothetical protein PaerPA_01005749 [Pseudomonas aeruginosa PACS2]
gi|116053720|ref|YP_794047.1| ribonuclease P [Pseudomonas aeruginosa UCBPP-PA14]
gi|254243113|ref|ZP_04936435.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
gi|13878724|sp|Q9HT05|RNPA_PSEAE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122256260|sp|Q02DD9|RNPA_PSEAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9951910|gb|AAG08954.1|AE004968_8 ribonuclease P protein component [Pseudomonas aeruginosa PAO1]
gi|115588941|gb|ABJ14956.1| ribonuclease P protein component [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126196491|gb|EAZ60554.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
Length = 135
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E + G D V+IA++ + EL F + +R R+
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRP 118
>gi|308071642|ref|YP_003873247.1| ribonuclease P [Paenibacillus polymyxa E681]
gi|305860921|gb|ADM72709.1| Ribonuclease P protein component (RNaseP protein) [Paenibacillus
polymyxa E681]
Length = 116
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V + G+ F + RVG + +KK G AV RNR
Sbjct: 1 MQKKLRLRNRADFGRVYRHGKSFANHQFVVYWFRRREVEQF-RVGISASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
MRR +KE VR +++ D + I ++ A+ + ++EL + +R+
Sbjct: 60 MRRIVKEIVRHHEHELVEQ-IDLIFIVRKGAVTMSYQELEKSVLHVLRKA 108
>gi|332365177|gb|EGJ42940.1| ribonuclease P protein component [Streptococcus sanguinis SK1059]
Length = 119
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K+G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQYQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|310659888|ref|YP_003937609.1| ribonuclease p [Clostridium sticklandii DSM 519]
gi|308826666|emb|CBH22704.1| ribonuclease P [Clostridium sticklandii]
Length = 108
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+K F + +KG+ + N+ RVG++++KK G AV RNR+RR +
Sbjct: 5 RLRKDSDFKNIYRKGKSLATKTLVFYFIKNDLG--YTRVGYSISKKVGKAVTRNRIRRLI 62
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
KE ++ LK G+D + I + + +KE+ R++
Sbjct: 63 KENLKDI--PDLKDGYDIIFIGRIPSSESDYKEIGKSVRYLFRKS 105
>gi|328958801|ref|YP_004376187.1| ribonuclease P [Carnobacterium sp. 17-4]
gi|328675125|gb|AEB31171.1| ribonuclease P [Carnobacterium sp. 17-4]
Length = 112
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + VL+ + RVG +V KK G AV RN+
Sbjct: 1 MRKTYRVKKEAEFQKVFHHGKSTANRQFVIYVLDKKDQ-PHFRVGISVGKKIGNAVVRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R +++++ + LK D+++IA++ A + E + ++ K
Sbjct: 60 VKRSIRQSL-TELKPQLKAEKDFIVIARKPAAEMTVLETKKSLMHVLKLAK 109
>gi|299132592|ref|ZP_07025787.1| ribonuclease P protein component [Afipia sp. 1NLS2]
gi|298592729|gb|EFI52929.1| ribonuclease P protein component [Afipia sp. 1NLS2]
Length = 125
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F +G P F ++ +++ R+GFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLKKRADFIAAAQGPRIARPAFVVQSRLRDDTGPT-RIGFTVTKKVGTATERNRVRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY-YSGKNFS 120
L+E VRL D+V++ +R AL F + F + R R +G
Sbjct: 60 LREMVRLAGVIAPPSPRDHVIVGRRAALDHEFSVMIEDFRSALMRLTRMKDRAGDPRP 117
>gi|258512907|ref|YP_003186341.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479633|gb|ACV59952.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 120
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK R F V +KG+ L +N + + RVGF++++K G AV RNR
Sbjct: 1 MQSQHRLKDSRDFRRVFRKGKSFASGRLVLYYCDNRVARV--RVGFSISRKVGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK-RSYYSGKN 118
++R L+ + + + D V++ + +A F +L +++ + +G
Sbjct: 59 LKRLLRAIFQRQLDELCHRPVDIVVVCRANAADADFHDLEREVERLLKKAQLLPQEAGDE 118
Query: 119 FS 120
Sbjct: 119 RP 120
>gi|325697376|gb|EGD39262.1| ribonuclease P protein component [Streptococcus sanguinis SK160]
Length = 119
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ K+G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNVIFKRGQSFANRKFVVYMLEKEQK--HFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|294781809|ref|ZP_06747142.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
gi|294481919|gb|EFG29687.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
Length = 111
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + K + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF-NKNKLDYSRFGFVASKKIGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA----LFIPFKELCNHFVERVRRNK 110
+E +RL E L +D +++AK+ A I ++++ + +K
Sbjct: 60 FREYIRLNIEK-LNANYDIIIVAKKKAGEIIETIKYQDIEKDLNRIFKNSK 109
>gi|270293446|ref|ZP_06199654.1| ribonuclease P protein component [Streptococcus sp. M143]
gi|270278108|gb|EFA23957.1| ribonuclease P protein component [Streptococcus sp. M143]
Length = 123
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G F + L N S RVG +V+KK G AV RN+
Sbjct: 1 MKKSFRVKREKDFNAIFTDGTSFANRKFVVYQLENQKS--HFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + L L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIL-LSVREQLADNVDFVVIARKGVEGLDYAEMEKNLLHVLKLSK 108
>gi|86747810|ref|YP_484306.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
gi|86570838|gb|ABD05395.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
Length = 113
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ ++ + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFLAVANGRRISGPAFVLQGRRRDDPGPV-RVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
L+E V+ G++ DYVL+ +R AL F + + R R
Sbjct: 60 LRELVKRADRGLMLPNSDYVLVGRRAALSRDFAVMLGDLRSALDRIARRSSKPD 113
>gi|116334865|ref|YP_796392.1| ribonuclease P [Lactobacillus brevis ATCC 367]
gi|122268456|sp|Q03N61|RNPA_LACBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116100212|gb|ABJ65361.1| RNase P protein component [Lactobacillus brevis ATCC 367]
Length = 118
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQQVFETRNSVANRQFVVYSMEKPQQ-PHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ L + LK D+++IA+ A I + V ++ K
Sbjct: 60 VKRRIRQSL-LELKPHLKQDVDFLVIARPRADGISMTDAKRSLVHVLKLAK 109
>gi|296392436|ref|ZP_06881911.1| ribonuclease P [Pseudomonas aeruginosa PAb1]
Length = 135
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E + G D V+IA++ + EL F + +R R+
Sbjct: 76 HNQE--VLAGWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRP 118
>gi|254520698|ref|ZP_05132754.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
gi|226914447|gb|EEH99648.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
Length = 116
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVERNR 59
L+K +F LV ++G+ L NN ++ +VG +V+KK G +V R+R
Sbjct: 4 RLRKNNEFKLVYRRGKSLANNLLVLYTFNNRKNKTEDNLTYNKVGISVSKKVGNSVVRSR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + E+ RL E LK G+D+V +A+ F E+ N + +
Sbjct: 64 SKRLITESYRLN-EKDLKSGYDFVFVARSAIKGKSFSEVENAMKKLFLKA 112
>gi|116493572|ref|YP_805307.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
gi|122264964|sp|Q03D57|RNPA_PEDPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116103722|gb|ABJ68865.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
Length = 119
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + V++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKELEFQKVFETRNSFANKKFVVYVMDKPEQ-PHFRVGISVGKKIGNAVMRNY 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RR+++++ L + +L+ D+++IA+ A +P E+ +
Sbjct: 60 TKRRIRQSI-LEFKPLLRQDVDFLVIARPQASGLPMNEVKQQLEHVFK 106
>gi|218894671|ref|YP_002443541.1| ribonuclease P [Pseudomonas aeruginosa LESB58]
gi|226736872|sp|B7V7A6|RNPA_PSEA8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218774900|emb|CAW30719.1| ribonuclease P protein component [Pseudomonas aeruginosa LESB58]
Length = 135
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF+ V + K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPIGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E + G D V+IA++ + EL F + +R R+
Sbjct: 76 HNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRP 118
>gi|146284524|ref|YP_001174677.1| ribonuclease P [Pseudomonas stutzeri A1501]
gi|166226733|sp|A4VS84|RNPA_PSEU5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145572729|gb|ABP81835.1| ribonuclease P protein component [Pseudomonas stutzeri A1501]
Length = 131
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF V K P ++ +L N PR+G + KK +VERNR++R+++E R
Sbjct: 15 RQFKAVFDSPSGKVPGRNVLLLARENDLQHPRLGLVIGKKSVKLSVERNRIKRQIRETFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ G D V+IA++ + EL F + +R R
Sbjct: 75 HHQLELA--GWDIVIIARKGLADLDNPELAKQFAKLWKRLSR 114
>gi|152986774|ref|YP_001351681.1| ribonuclease P [Pseudomonas aeruginosa PA7]
gi|166226732|sp|A6VF46|RNPA_PSEA7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150961932|gb|ABR83957.1| ribonuclease P protein component [Pseudomonas aeruginosa PA7]
Length = 135
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+ R
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E + G D V+IA++ + EL F + +R R+
Sbjct: 76 HNQEALA--GWDIVMIARKGLGELENPELHQQFGKLWKRLLRNRP 118
>gi|253573860|ref|ZP_04851202.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846337|gb|EES74343.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
Length = 116
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F + + G+ + N R+G + +KK G AV RNR
Sbjct: 1 MHKQLRLRNRADFNRIYRFGKSFANRQLVVYWSNKPEIERF-RLGVSASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
MRR LKE VRL E ++ D +LI + A+ + +K+L + +R+ SG+
Sbjct: 60 MRRMLKEIVRLH-EAEIRDHVDLILIVRNGAVGMEYKDLEKSVLHVLRKASLLRDSGR 116
>gi|166363145|ref|YP_001655418.1| ribonuclease P [Microcystis aeruginosa NIES-843]
gi|189043738|sp|B0JN62|RNPA_MICAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166085518|dbj|BAG00226.1| protein subunit of ribonuclease P [Microcystis aeruginosa NIES-843]
Length = 120
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN--NNSNLLPRVGFTVTKKQ-GCAVE 56
+ I LK R+ F V G+ G +L L + ++ R G +++KK AV
Sbjct: 3 LPQIHRLKHRQDFQAVYGTGKRYHGSHLTLISLEDSCPDAPGPSRFGISISKKVSKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++R+++ +R + G ++I + A+ ++ + + +
Sbjct: 63 RNRLKRQIRAVIRELLPEIA-AGWRGIIIIRPGAIECNYEHFLRELKQLLVKA 114
>gi|226947219|ref|YP_002802292.1| ribonuclease P [Azotobacter vinelandii DJ]
gi|259494099|sp|C1DNF9|RNPA_AZOVD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226722146|gb|ACO81317.1| Bacterial ribonuclease P protein [Azotobacter vinelandii DJ]
Length = 130
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
RQF V K P + +L N+ PR+G + KK +V RNR++R ++E+ R
Sbjct: 16 RQFKAVFDSPTAKVPGKHVLLLARPNALDHPRLGLVIGKKSVKLSVGRNRLKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
L + + G D V++A++ + E+ F + +R RS
Sbjct: 76 LNQDSLA--GWDIVVVARKGLGELENTEVTQQFGKLWKRLARSRP 118
>gi|251800248|ref|YP_003014979.1| ribonuclease P [Paenibacillus sp. JDR-2]
gi|247547874|gb|ACT04893.1| ribonuclease P protein component [Paenibacillus sp. JDR-2]
Length = 117
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F + + G+ F + + R+G + +KK G AV RNR
Sbjct: 1 MQRKLRLRNRADFNRIYRYGKSFANGQFVVYWSRQPVAEPF-RLGVSASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
MRR +KE VRL E ++ D++LI ++ A+ + K+L +++ +
Sbjct: 60 MRRVIKEIVRLNGEKIV-PNTDFILIVRKPAVEMESKQLEKSIFHVLKKAGLLKKDAR 116
>gi|115522670|ref|YP_779581.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
gi|115516617|gb|ABJ04601.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
Length = 113
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G P F L+ ++ + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFIAVANGARANRPAFVLQARGRDDDGPV-RVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
L+E V+ V++ DYVL+ +RDAL F + + R R S K
Sbjct: 60 LRELVKRVDGAVIRPHSDYVLVGRRDALSRGFSVMLDDLHSAFDRVARRSPSAK 113
>gi|270289894|ref|ZP_06196120.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304385853|ref|ZP_07368197.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
gi|270281431|gb|EFA27263.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304328357|gb|EFL95579.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
Length = 119
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V + F + V++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEKEFQEVFETRNSFANKKFVVYVMDKP-GQPHFRVGISVGKKIGNAVMRNY 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
M+RR+++++ L + +L+ D+++IA+ A +P KE+ +
Sbjct: 60 MKRRIRQSI-LEFKPLLRSDVDFLVIARPQASGLPMKEVKRQLEHVFK 106
>gi|313665771|ref|YP_004047642.1| ribonuclease P protein component [Mycoplasma leachii PG50]
gi|312949607|gb|ADR24203.1| ribonuclease P protein component [Mycoplasma leachii PG50]
Length = 109
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N I+KK +F ++ + K F + N+ S + G +V KK G AV RN+
Sbjct: 1 MKNKRIIKKNFEFQEIINYKKTIKNFCFVIYYKENDQS--YLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R V D +++ ++ L + + L V+ ++ K
Sbjct: 59 VKRQIRMILRQNISEVGTVSKDIIILVRKSVLELKYATLSKSLVKLIKEIK 109
>gi|253702735|ref|YP_003023924.1| ribonuclease P [Geobacter sp. M21]
gi|259494108|sp|C6DYS3|RNPA_GEOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|251777585|gb|ACT20166.1| ribonuclease P protein component [Geobacter sp. M21]
Length = 116
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +R +F +G + L +L RVGFTV+KK G AV RN ++
Sbjct: 7 PKAERLLRRPEFLQFNEGASKLHTQHFLVLLKLKEGTGT-RVGFTVSKKVGNAVVRNSIK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RRL+E R + D ++AK+ A + F+++ R ++ Y
Sbjct: 66 RRLREFYRQNKSLFILA--DINIVAKKGADVLDFQQISTELAAAFGRLRKKY 115
>gi|227485755|ref|ZP_03916071.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
gi|227236310|gb|EEI86325.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
Length = 116
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V K F++ V +N+ N PR GFT++KK G A RN+
Sbjct: 1 MEKRLSLKKDKDFKKVYKKNFACYNRDFTVLVRDNDLKN--PRFGFTISKKIGKAHSRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R+L+E R+ + +G D V+I K+ ++ L + + + R
Sbjct: 59 LKRKLREIARINYANL--NGVDIVIIPKKHTTEFDYQRLKSSLGHALNQAFRKKK 111
>gi|256383753|gb|ACU78323.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384584|gb|ACU79153.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455756|gb|ADH21991.1| ribonuclease P protein component [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 109
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F ++ + K F + +N+ S + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTVKNFCFVIYYKDNDQS--YLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEIGSISKDVIILVRKSVLELKYATLSKSLIKLIKEIK 109
>gi|184156318|ref|YP_001844658.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227514116|ref|ZP_03944165.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260662536|ref|ZP_05863431.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
gi|238689194|sp|B2GEU6|RNPA_LACF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183227662|dbj|BAG28178.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227087487|gb|EEI22799.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260553227|gb|EEX26170.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
Length = 114
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + F + + N RVG +V KK G AV+R
Sbjct: 1 MKKSYRIKKESDFQRVFETHNSVANHKFVIYQMQKPNQ-PHFRVGISVGKKVGNAVQRGW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RR+++ + L + LK D+++IA++ A + KE+ + V +
Sbjct: 60 VKRRIRQTL-LEVKPELKQDVDFLVIARKSAADLSMKEIKKNLVHAL 105
>gi|316932101|ref|YP_004107083.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
gi|315599815|gb|ADU42350.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
Length = 113
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ L + + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MERLRQRADFIAVAGGLRINGPAFVLQSLRREDQGPI-RVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+E V+ G L DYVL+ +R AL F + + R R
Sbjct: 60 LRELVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERAARRSPKP 112
>gi|222056915|ref|YP_002539277.1| ribonuclease P protein component [Geobacter sp. FRC-32]
gi|221566204|gb|ACM22176.1| ribonuclease P protein component [Geobacter sp. FRC-32]
Length = 119
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L KR QF V G+ F + L + + ++G TV++K G AV RNR+RR +
Sbjct: 15 RLLKRSQFLHVSDAGKKIHTAHFIILGLVSAD---WTKIGITVSRKVGNAVCRNRIRRLV 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E RL + Y +IAKR A + ++++C + R
Sbjct: 72 REFYRLNKQHFAVA--YYNIIAKRGAEQLNYQQVCRELANALER 113
>gi|260887482|ref|ZP_05898745.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|330840120|ref|YP_004414700.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|260862769|gb|EEX77269.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|329747884|gb|AEC01241.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
Length = 128
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ILKK++ F V +G+ F L V + L +VGF KK G AV+RNR
Sbjct: 4 LPRSRILKKKKDFQAVYSRGKSYANRFLVLYVF--RSHGLQGKVGFAAGKKLGNAVKRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+E+ RL + ++ G +L+ ++ AL + ++L F+ R+ +
Sbjct: 62 VKRLLRESYRLH-QVEIEEGFSLLLVGRKAALDVKCQDLEKAFLALGRKAE 111
>gi|28379982|ref|NP_786874.1| ribonuclease P [Lactobacillus plantarum WCFS1]
gi|254558116|ref|YP_003064533.1| ribonuclease P [Lactobacillus plantarum JDM1]
gi|300769105|ref|ZP_07078994.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308182186|ref|YP_003926314.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258509|sp|Q88RX0|RNPA_LACPL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28272823|emb|CAD65752.1| ribonuclease P [Lactobacillus plantarum WCFS1]
gi|254047043|gb|ACT63836.1| ribonuclease P [Lactobacillus plantarum JDM1]
gi|300493345|gb|EFK28524.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308047677|gb|ADO00221.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 114
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + VL RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKETEFQQVFETRNSYANRQFVIYVLEKP-GQPHFRVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ + LK D+++IA+ E + ++
Sbjct: 60 VKRRIRQSI-TELKPQLKQDADFLVIARPTVAGKSQAETKAYLSHALK 106
>gi|310644874|ref|YP_003949633.1| ribonuclease p protein component [Paenibacillus polymyxa SC2]
gi|309249825|gb|ADO59392.1| Ribonuclease P protein component [Paenibacillus polymyxa SC2]
Length = 116
Score = 79.9 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V + G+ F + RVG + +KK G AV RNR
Sbjct: 1 MQKKLRLRNRADFGRVYRHGKSFANHQFVVYWFRRREVEQF-RVGISASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
MRR +KE VR + +++ D + I ++ A+ ++EL + +R+
Sbjct: 60 MRRIVKEIVRHHEQELVEQ-IDLIFIVRKGAVTKSYQELEKSVLHVLRKA 108
>gi|331703941|ref|YP_004400628.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328802496|emb|CBW54651.1| Ribonuclease P protein component [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 109
Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F ++ + K F + +N+ S + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTVKNFCFVIYYKDNDQS--YLKYGISVGKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R V D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEVGTISKDVIILVRKSVLELKYATLSKSLIKLIKEIK 109
>gi|39933710|ref|NP_945986.1| ribonuclease P protein component [Rhodopseudomonas palustris
CGA009]
gi|192289067|ref|YP_001989672.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
gi|39647557|emb|CAE26077.1| probable ribonuclease p protein component (protein c5)
[Rhodopseudomonas palustris CGA009]
gi|192282816|gb|ACE99196.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
Length = 113
Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ L + + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MERLRQRADFIAVAGGLRINGPAFVLQSLRREDQGPI-RVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+E V+ G L DYVL+ +R AL F + + R R
Sbjct: 60 LRELVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERVARRSPKP 112
>gi|328952577|ref|YP_004369911.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
gi|328452901|gb|AEB08730.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
Length = 125
Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L KR +F VK+ G R+ P F + + +N+ PR+G VTK+ G AV+RNR++R L
Sbjct: 17 RLLKRAEFQRVKQVGSRRRSPHFVISLADNDLQR--PRLGVVVTKRLGKAVQRNRVKRLL 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+E R + D V+IAK A + E+ +
Sbjct: 75 REFFRRHKG--ILPPQDIVIIAKPGAPGLTSAEVAAELGPVL 114
>gi|118582024|ref|YP_903274.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
gi|118504734|gb|ABL01217.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
Length = 135
Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+KR F ++ F + +N + LPR+G T +KK GCAV RNR+
Sbjct: 19 PKSVRLRKRADFVALQNAAGKVTVKGFLIVWQDNGHD--LPRLGITASKKTGCAVVRNRI 76
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E R + D +IA+R++ + F+ + + RR
Sbjct: 77 KRFVRETFRCNRRTL--PPVDMNVIARRESAAMDFRGVQRELEKAFRRM 123
>gi|296328800|ref|ZP_06871314.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154135|gb|EFG94939.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 112
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +KK G A RNR++R
Sbjct: 2 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF-NKNKLEYSRFGFVASKKVGKAFCRNRIKRL 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL + +D +++AK+ + + +K++ + +K
Sbjct: 61 FREYIRLNI-NKINDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRVFKNSK 110
>gi|251783354|ref|YP_002997659.1| ribonuclease P [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391986|dbj|BAH82445.1| ribonuclease P protein component [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323128078|gb|ADX25375.1| ribonuclease P [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 119
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG + KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKAGKSTANRKFVIYHLAKDQK--HFRVGISAGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + + EL + ++
Sbjct: 59 VKRKIRHVLMALGNQLKSE--DFVVIARKGVETLDYHELQQNLHHVLK 104
>gi|259500779|ref|ZP_05743681.1| ribonuclease P protein component [Lactobacillus iners DSM 13335]
gi|302190770|ref|ZP_07267024.1| ribonuclease P [Lactobacillus iners AB-1]
gi|309804031|ref|ZP_07698112.1| ribonuclease P protein component [Lactobacillus iners LactinV
11V1-d]
gi|309804892|ref|ZP_07698954.1| ribonuclease P protein component [Lactobacillus iners LactinV
09V1-c]
gi|309805910|ref|ZP_07699942.1| ribonuclease P protein component [Lactobacillus iners LactinV
03V1-b]
gi|309807838|ref|ZP_07701770.1| ribonuclease P protein component [Lactobacillus iners LactinV
01V1-a]
gi|309809727|ref|ZP_07703581.1| ribonuclease P protein component [Lactobacillus iners SPIN
2503V10-D]
gi|312871282|ref|ZP_07731380.1| ribonuclease P protein component [Lactobacillus iners LEAF 3008A-a]
gi|312872695|ref|ZP_07732760.1| ribonuclease P protein component [Lactobacillus iners LEAF
2062A-h1]
gi|312873290|ref|ZP_07733345.1| ribonuclease P protein component [Lactobacillus iners LEAF 2052A-d]
gi|312874918|ref|ZP_07734937.1| ribonuclease P protein component [Lactobacillus iners LEAF 2053A-b]
gi|325912309|ref|ZP_08174706.1| ribonuclease P protein component [Lactobacillus iners UPII 143-D]
gi|325913659|ref|ZP_08176021.1| ribonuclease P protein component [Lactobacillus iners UPII 60-B]
gi|329919786|ref|ZP_08276737.1| ribonuclease P protein component [Lactobacillus iners SPIN 1401G]
gi|259167473|gb|EEW51968.1| ribonuclease P protein component [Lactobacillus iners DSM 13335]
gi|308163799|gb|EFO66065.1| ribonuclease P protein component [Lactobacillus iners LactinV
11V1-d]
gi|308165831|gb|EFO68052.1| ribonuclease P protein component [Lactobacillus iners LactinV
09V1-c]
gi|308167686|gb|EFO69833.1| ribonuclease P protein component [Lactobacillus iners LactinV
03V1-b]
gi|308168940|gb|EFO71026.1| ribonuclease P protein component [Lactobacillus iners LactinV
01V1-a]
gi|308169906|gb|EFO71945.1| ribonuclease P protein component [Lactobacillus iners SPIN
2503V10-D]
gi|311089663|gb|EFQ48088.1| ribonuclease P protein component [Lactobacillus iners LEAF 2053A-b]
gi|311091170|gb|EFQ49559.1| ribonuclease P protein component [Lactobacillus iners LEAF 2052A-d]
gi|311091737|gb|EFQ50116.1| ribonuclease P protein component [Lactobacillus iners LEAF
2062A-h1]
gi|311093296|gb|EFQ51642.1| ribonuclease P protein component [Lactobacillus iners LEAF 3008A-a]
gi|325475968|gb|EGC79137.1| ribonuclease P protein component [Lactobacillus iners UPII 143-D]
gi|325477018|gb|EGC80168.1| ribonuclease P protein component [Lactobacillus iners UPII 60-B]
gi|328937133|gb|EGG33561.1| ribonuclease P protein component [Lactobacillus iners SPIN 1401G]
Length = 123
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +K + F LV G+ F L L+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQLVFETGQSMANKAFVLYQLDKVNQ-PHFRVGISVGKKVGHNAVLRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ A+ + ++K D+++IA+ + K + + ++
Sbjct: 60 RIKRCIRAAI-TEDKHMIKKDVDFLVIARPYVKDLDMKCIKANLEHVMK 107
>gi|225016762|ref|ZP_03705954.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
gi|224950430|gb|EEG31639.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
Length = 112
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LK + F +G+ + P +L R+G TV+KK G AV RNR
Sbjct: 1 MKYTVSLKLNKDFKRLYYRGKFKASPVLVTYILKCR--GKQCRMGITVSKKIGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+RR +K A R G+D V +A+ A+ ++ +++
Sbjct: 59 VRRIIKAAYREVEPQFHLAGYDVVFVARSKAVEKKSTDISREMKKQL 105
>gi|332971201|gb|EGK10164.1| ribonuclease P protein component [Desmospora sp. 8437]
Length = 106
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
F + + R+G +V++K G AV RNR++R +KE R L D
Sbjct: 1 MANRQFVVYRSVRKEEGPV-RIGISVSRKVGNAVTRNRIKRLVKEITRR-WVDSLPPDTD 58
Query: 82 YVLIAKRDALFIPFKELCNHFVERVRRN 109
+LIA++ A + F + + + +
Sbjct: 59 LILIARKPAADMDFHRMKSSLSHLMNKA 86
>gi|282601448|ref|ZP_06258054.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
gi|282569119|gb|EFB74654.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
Length = 143
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L K Q+ V +G+ P L V N R+G T TKK G AV+RNR RR +
Sbjct: 21 TLNKNWQYNRVYGRGKSYVHPHVVLYVAKNRLG--YTRIGLTATKKVGHAVQRNRCRRVM 78
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ A+ + G+D +L+A+ + +L + +
Sbjct: 79 RAALSEHLSQNI-GGYDIILVARGQTPHLKSTQLSKTLGKLFAKA 122
>gi|15901863|ref|NP_346467.1| ribonuclease P [Streptococcus pneumoniae TIGR4]
gi|111658726|ref|ZP_01409363.1| hypothetical protein SpneT_02000139 [Streptococcus pneumoniae
TIGR4]
gi|21263957|sp|Q97NI5|RNPA_STRPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14973553|gb|AAK76107.1| ribonuclease P protein component [Streptococcus pneumoniae TIGR4]
Length = 123
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N + RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKNRF--RVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ A+G L D+V+IA++ + + E+ + + ++ + Y G
Sbjct: 59 IKRRIRHIIQ-NAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLK-LSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|322412739|gb|EFY03647.1| ribonuclease P [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 119
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG + KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKVGKSTANRKFVIYHLAKDQK--HFRVGISAGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + + EL + ++
Sbjct: 59 VKRKIRHVLMALGNQLKSE--DFVVIARKGVETLDYHELQQNLHHVLK 104
>gi|330833640|ref|YP_004402465.1| ribonuclease P [Streptococcus suis ST3]
gi|329307863|gb|AEB82279.1| ribonuclease P [Streptococcus suis ST3]
Length = 119
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYCVKRERDFNDIFTKGNNVANRRFVVYRLPKEQK--HFRVGLSVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 59 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 107
>gi|319946178|ref|ZP_08020418.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
gi|319747560|gb|EFV99813.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
Length = 113
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L RVG +V+KK G AV RNR
Sbjct: 1 MRKSYRVKREKDFNAIFKSGMNCANRKFVIYRLP--QEQPHFRVGLSVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++ + + ++ D+V+IA++ + F ++ + V ++
Sbjct: 59 IKRLIRHVLMKHQDHLVAD--DFVVIARKGVEELDFDQVEKNLVHVLK 104
>gi|315654128|ref|ZP_07907044.1| ribonuclease P protein component [Lactobacillus iners ATCC 55195]
gi|315488824|gb|EFU78470.1| ribonuclease P protein component [Lactobacillus iners ATCC 55195]
Length = 123
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +K + F LV G+ F L L+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQLVFETGQSMANKAFVLYQLDKVNQQHF-RVGISVGKKVGHNAVLRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ A+ + ++K D+++IA+ + K + + ++
Sbjct: 60 RIKRCIRAAI-TEDKHMIKKDVDFLVIARPYVKDLDMKCIKANLEHVMK 107
>gi|146319669|ref|YP_001199381.1| ribonuclease P [Streptococcus suis 05ZYH33]
gi|146321864|ref|YP_001201575.1| ribonuclease P [Streptococcus suis 98HAH33]
gi|145690475|gb|ABP90981.1| RNase P protein component [Streptococcus suis 05ZYH33]
gi|145692670|gb|ABP93175.1| RNase P protein component [Streptococcus suis 98HAH33]
gi|292559285|gb|ADE32286.1| RNaseP protein [Streptococcus suis GZ1]
Length = 133
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 15 LKKSYRVKRERDFNDIFTKGNNVANRRFVVYRLPKEQK--HFRVGLSVSKKLGNAVMRNK 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 73 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 121
>gi|290968156|ref|ZP_06559701.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
gi|290781831|gb|EFD94414.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
Length = 118
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L+K +++ LV + G+ + L V+ +S R+GF KK GCAVERNR
Sbjct: 4 LTKDSRLRKNKEYRLVYRYGKSYVNRYVVLYVMAR-SSKQCTRMGFVTGKKIGCAVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RR +KE RL + + G D VLI + I F + + ++ +R
Sbjct: 63 CRRLMKEVYRLHRQELG-SGFDLVLIGRSPLKNINFAQAEYYILKVLR 109
>gi|56808046|ref|ZP_00365845.1| COG0594: RNase P protein component [Streptococcus pyogenes M49 591]
Length = 102
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQD--HFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
++R+++ + + D+V+IA++ + ++EL +
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHV 102
>gi|83319517|ref|YP_424811.1| ribonuclease P protein component [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|1173100|sp|P43039|RNPA_MYCCT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|416239|dbj|BAA03619.1| RNaseP C5 subunit [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283403|gb|ABC01335.1| ribonuclease P protein component [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 109
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F ++ + K F + +N + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTIKNFCFVIYY--KDNEESYLKYGISVGKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILKQNISEIGTVSKDIIILVRKSVLELKYATLSKLLIKLIKEIK 109
>gi|81429495|ref|YP_396496.1| ribonuclease P [Lactobacillus sakei subsp. sakei 23K]
gi|123563593|sp|Q38UE4|RNPA_LACSS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78611138|emb|CAI56191.1| Ribonuclease P protein component [Lactobacillus sakei subsp. sakei
23K]
Length = 120
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F V + F + L+ RVG +V KK G AV RN+
Sbjct: 1 MRKSYRVKKEQDFQTVFDASQSVANRNFVVYRLDKPGQKHF-RVGLSVGKKVGNAVMRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ +L+ D+++IA+R A + E + + + K +
Sbjct: 60 VKRYIRQSITELKPDLLQP-VDFLVIARRGANQLTMAETKQNLIHVFKLAKLLKEEADSA 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|257871386|ref|ZP_05651039.1| ribonuclease P [Enterococcus gallinarum EG2]
gi|257805550|gb|EEV34372.1| ribonuclease P [Enterococcus gallinarum EG2]
Length = 111
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V +KG+ F + VL + RVG +V KK G AV+RN
Sbjct: 1 MRKAYRVKTEQDFQKVFQKGKSFANRKFVVYVLQKDQ--PHFRVGLSVGKKVGNAVKRNE 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + +K D+++IA+ +E+ ++ ++ K
Sbjct: 59 IKRKIRASL-TDMQPRIKPTLDFIVIARPSVSNCSSQEVYSNLEHVLKLAK 108
>gi|19703354|ref|NP_602916.1| ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|22001933|sp|Q8RHA6|RNPA_FUSNN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|19713416|gb|AAL94215.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 111
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF-NKNKLEYSRFGFIASKKVGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL + +D +++AK+ + + +K++ + +K
Sbjct: 60 FREYIRLNI-NKINDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRVFKNSK 109
>gi|237743158|ref|ZP_04573639.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|256027565|ref|ZP_05441399.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|260495362|ref|ZP_05815489.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289765524|ref|ZP_06524902.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|229433454|gb|EEO43666.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|260197140|gb|EEW94660.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289717079|gb|EFD81091.1| ribonuclease P protein component [Fusobacterium sp. D11]
Length = 111
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF-NKNKLECSRFGFVASKKIGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL L +D +++AK+ + + ++++ + +K
Sbjct: 60 FREYIRLNI-NKLNDNYDIIIVAKKKFGENIENLKYQDIKKDLDRIFKNSK 109
>gi|42561575|ref|NP_976026.1| ribonuclease P (protein C5) [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|60390465|sp|Q6MRS3|RNPA_MYCMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|42493074|emb|CAE77668.1| Ribonuclease P (protein C5) [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301321248|gb|ADK69891.1| ribonuclease P protein component [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 109
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F ++ + K F + +N+ S + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTIKNFCFIIYYKDNDQS--YLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEIGTISKDVIILVRKSVLKLKYATLSKSLIKLIKEIK 109
>gi|223933966|ref|ZP_03625924.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|253752666|ref|YP_003025807.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|253754492|ref|YP_003027633.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|253756425|ref|YP_003029565.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|223897358|gb|EEF63761.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|251816955|emb|CAZ52604.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|251818889|emb|CAZ56732.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|251820738|emb|CAR47500.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|319759083|gb|ADV71025.1| ribonuclease P [Streptococcus suis JS14]
Length = 119
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKRERDFNDIFTKGNNVANRRFVVYRLPKEQK--HFRVGLSVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 59 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 107
>gi|239624138|ref|ZP_04667169.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520524|gb|EEQ60390.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 114
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K R+F + K G + V+ + R+G +V++K G ++ R+
Sbjct: 1 MKRFPSVRKNREFQDIYKHGTSYANRLLVMYVME--SGEDGNRIGISVSRKVGNSIVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL ++ G + +++A+ A +K+L ++
Sbjct: 59 ITRLLREIFRLNNSR-IRTGLNIIVVARVAAKKSDYKDLEGAYLHL 103
>gi|307721587|ref|YP_003892727.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
gi|306979680|gb|ADN09715.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
Length = 103
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K ++F V KG+ + L L + +VGFT TKK G AV+RNR +RRL+
Sbjct: 1 MKLHKEFQYVYNKGKNQHSQSVVLFFLP---QPGVRKVGFTATKKLGNAVKRNRAKRRLR 57
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
K G YV +AK PF++L N F + + R K
Sbjct: 58 ALF-CEYSDSFKDGT-YVFVAKAAIFDAPFEKLTNDFNKVLSRAK 100
>gi|222153768|ref|YP_002562945.1| ribonuclease P [Streptococcus uberis 0140J]
gi|254808091|sp|B9DVV7|RNPA_STRU0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222114581|emb|CAR43557.1| ribonuclease P protein component [Streptococcus uberis 0140J]
Length = 119
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L RVG +V K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFDGGKSTANRKFVIHFLEKEQD--HYRVGISVGKRIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + ++ + + D+V+IA++ + ++E+ + ++
Sbjct: 59 VKRKIRHVIMEFSDHLKRD--DFVVIARKGVENLDYQEVKQNLQHVLK 104
>gi|313885571|ref|ZP_07819321.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619301|gb|EFR30740.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
Length = 128
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 13 FALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLC 71
F V G+ L + RVG +V KK G AVERN+++R L++A+
Sbjct: 15 FQEVFHHGQSIANRQLVLYTYAKPGQSHF-RVGLSVGKKMGNAVERNQIKRYLRQALHEL 73
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ D +LIA++D E+ + +
Sbjct: 74 EPA-IQTDLDILLIARKDICGRSMAEVRKSMIHVM 107
>gi|325291451|ref|YP_004267632.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
gi|324966852|gb|ADY57631.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
Length = 126
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F G + ++ + GF +KK G +V+RNR
Sbjct: 17 LKKGLRLKKSGDFQRTFAAGRSYTSRQAVIYLVKGDTC-----FGFIASKKVGNSVKRNR 71
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++EAVRL +K G+ VLIA+RD + + E+ + +R+
Sbjct: 72 AKRLMREAVRLNLSR-IKPGYQVVLIARRDIIRATYAEVEKSVLFMLRKA 120
>gi|257067221|ref|YP_003153477.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
gi|256799101|gb|ACV29756.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
Length = 116
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K + F++ + NN PR G T++KK G A +RN
Sbjct: 1 MEKRISLRKDLDFQRVYKKNKAFYNRDFTVLI--KNNGLNHPRFGITISKKIGKANQRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+L+E +RL + +G D V+I K+ + +L + + +
Sbjct: 59 LKRKLREILRLNYASI--NGVDIVIIPKKHTTDFTYDKLKKSLGHVLSKAFKK 109
>gi|254302382|ref|ZP_04969740.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322574|gb|EDK87824.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 111
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF-NKNKLEYSRFGFVASKKVGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E ++L + + +D +++AK+ + + +K++ + +K
Sbjct: 60 FREYIKLNIDK-INDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRIFKNSK 109
>gi|309789713|ref|ZP_07684293.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
gi|308228199|gb|EFO81847.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
Length = 150
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF ++ G P L ++ R GF V K+ G AV+RNR
Sbjct: 31 MKRAYRLRRPDQFRRARREGRTFATPLLLLNLVAGRQ--RRTRCGFVVAKQIGGAVQRNR 88
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNKRSYYSGK 117
+RRL+E +RL + G+D VL+ + D + +PF L E +RR +
Sbjct: 89 AKRRLREVMRLALPQ-ITPGYDLVLVVRSADVIEMPFITLQTAVEELLRRAQVWRTPSP 146
>gi|313904723|ref|ZP_07838097.1| ribonuclease P protein component [Eubacterium cellulosolvens 6]
gi|313470516|gb|EFR65844.1| ribonuclease P protein component [Eubacterium cellulosolvens 6]
Length = 114
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V ++G + + V N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNSDFQQVYRRGTSNANKYLVMYVKENRLER--NRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++EA RL + K G D V+I + + K++ +
Sbjct: 59 LTRLVREAYRLKEDCFCK-GLDVVVICRVSSKDCTQKQIADALYHL 103
>gi|220910608|ref|YP_002485919.1| ribonuclease P [Cyanothece sp. PCC 7425]
gi|259494102|sp|B8HR50|RNPA_CYAP4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219867219|gb|ACL47558.1| ribonuclease P protein component [Cyanothece sp. PCC 7425]
Length = 131
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNN--------------NSNLLPRVGF 45
++ L+KR+ F V + G+ +L NS PR+G
Sbjct: 2 LAKPYRLRKRQDFTAVYQQGKRWNSSHLALRTYPRRRSALALDGVKQSALNSREPPRIGI 61
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++++K AV RNR++R+L+ +R L+ G D V++ + A+ +++ +
Sbjct: 62 SISQKVSKRAVVRNRIKRQLRAILRGLLP-YLQPGWDLVIVVRPTAVECDYQQFLQELKQ 120
Query: 105 RV 106
+
Sbjct: 121 LL 122
>gi|296875719|ref|ZP_06899784.1| ribonuclease P [Streptococcus parasanguinis ATCC 15912]
gi|312867497|ref|ZP_07727705.1| ribonuclease P protein component [Streptococcus parasanguinis
F0405]
gi|322390330|ref|ZP_08063858.1| ribonuclease P protein component [Streptococcus parasanguinis ATCC
903]
gi|296433289|gb|EFH19071.1| ribonuclease P [Streptococcus parasanguinis ATCC 15912]
gi|311096903|gb|EFQ55139.1| ribonuclease P protein component [Streptococcus parasanguinis
F0405]
gi|321142978|gb|EFX38428.1| ribonuclease P protein component [Streptococcus parasanguinis ATCC
903]
Length = 113
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG +V+KK G AV RNR
Sbjct: 1 MKKSYRVKRDKDFNAIFKSGQNVANRKFVVYRLRKDQ--PHFRVGLSVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++ + + D+V+IA++ + F ++ + V ++
Sbjct: 59 IKRLIRHVLIKHQAFLTTD--DFVVIARKGVEELDFHQVEKNLVHVLK 104
>gi|254293248|ref|YP_003059271.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
gi|254041779|gb|ACT58574.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
Length = 167
Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 23/146 (15%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----------------------S 37
+ + L+ RR F V KG + ++ + S
Sbjct: 11 IDRVERLRVRRAFLFVAKGYAERRRSVVVQARPRLSLQVDSVTNPPSQNNINTPVNKLIS 70
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ GFT TKK G AV RNR +RRL+EA DYV IA+RD +
Sbjct: 71 PKIAGAGFTATKKIGGAVVRNRAKRRLREASSQLMYKHALADVDYVFIARRDTATRQWDG 130
Query: 98 LCNHFVERVRRNKRSYYSGKNFSRKS 123
L + + ++ SG K
Sbjct: 131 LLDDVESALLSLRQKILSGDPPDPKP 156
>gi|257878644|ref|ZP_05658297.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257881310|ref|ZP_05660963.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257885585|ref|ZP_05665238.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257890527|ref|ZP_05670180.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257893102|ref|ZP_05672755.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|258615272|ref|ZP_05713042.1| ribonuclease P [Enterococcus faecium DO]
gi|260558225|ref|ZP_05830421.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|261206915|ref|ZP_05921604.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289566508|ref|ZP_06446932.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|293553545|ref|ZP_06674172.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|293563249|ref|ZP_06677701.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|293569161|ref|ZP_06680467.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|294616661|ref|ZP_06696432.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|294619743|ref|ZP_06699148.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|294623757|ref|ZP_06702585.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|314940133|ref|ZP_07847313.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|314943036|ref|ZP_07849840.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|314948154|ref|ZP_07851550.1| ribonuclease P protein component [Enterococcus faecium TX0082]
gi|314953432|ref|ZP_07856350.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|314993829|ref|ZP_07859165.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|314998146|ref|ZP_07863028.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|257812872|gb|EEV41630.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257816968|gb|EEV44296.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257821441|gb|EEV48571.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257826887|gb|EEV53513.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257829481|gb|EEV56088.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|260075399|gb|EEW63705.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|260078543|gb|EEW66245.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289161717|gb|EFD09593.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|291588130|gb|EFF19972.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|291590481|gb|EFF22219.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|291594013|gb|EFF25482.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|291596711|gb|EFF27934.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|291602300|gb|EFF32525.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|291604788|gb|EFF34270.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|313587858|gb|EFR66703.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|313591720|gb|EFR70565.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|313594535|gb|EFR73380.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|313598236|gb|EFR77081.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|313640638|gb|EFS05218.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|313645408|gb|EFS09988.1| ribonuclease P protein component [Enterococcus faecium TX0082]
Length = 118
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKEREFQAVFHTGDSFANRKFVVYRLEKP-GQPHFRVGLSVGKKVGNAVNRNE 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ AV + + D+++IA+ + + E+ ++ V ++ K
Sbjct: 60 VKRKIRAAV-YSIKEEIDPELDFIVIARPSVKGLTYDEVRSNLVHVLKLAK 109
>gi|218134373|ref|ZP_03463177.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
gi|217989758|gb|EEC55769.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
Length = 114
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
N LK F V + + +L N R+G +V+KK G ++ R+R+
Sbjct: 4 KNFETLKSNTDFNRVYAAKRSYANRLLVVYILENGTD--ANRLGVSVSKKVGNSIVRHRL 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
R ++E+ RL A+ V+ G D +++A+ + E
Sbjct: 62 ARLIRESYRLHADEVM-TGFDIIVVARTGLKNKDYFE 97
>gi|325478863|gb|EGC81973.1| ribonuclease P protein component [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 116
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K + F++ + NN PR GFT++KK G A RN
Sbjct: 1 MEKRISLRKDTDFQRVYKKNQAFYNRDFTILIKKNNLD--HPRFGFTISKKVGKANVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L++ VRL + + D V+I K+ + +L + + +
Sbjct: 59 LKRKLRDIVRLNYSNI--NNVDIVIIPKKHTTDFTYDKLKKSLGHVLSKAFKKK 110
>gi|95929984|ref|ZP_01312724.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
gi|95133953|gb|EAT15612.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
Length = 103
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K + + + G + +F L + N+ R GFTV+KK G AV RNR++R L+
Sbjct: 3 IKNKTDYTQCYQSGIKKHTRYFILFFIATNSP---ARFGFTVSKKIGGAVVRNRIKRLLR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDAL---FIPFKELCNHFVERV 106
E VR L +D V++AKR A + EL + + ++
Sbjct: 60 EFVRNNYSDDLL--YDVVIVAKRRAALFNKKKYAELADDLLPQL 101
>gi|326804335|ref|YP_004322153.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651500|gb|AEA01683.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
Length = 128
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F+LV G+ + F + + RVG +V KK G AV RNR
Sbjct: 1 MRKSYRVKSEKDFSLVFHQGDSKANRQFVVYSIEKEQK--HFRVGLSVGKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A+ + +K D+++IA++ + ++ + +R
Sbjct: 59 VKRLIRQAL-TELKPYIKSNVDFIIIARKPTKDMTQAQVKASLIHVMR 105
>gi|209965567|ref|YP_002298482.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
gi|209959033|gb|ACI99669.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
Length = 179
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 2 SNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGCA 54
+ L +R QF V + P L+ ++ RVGFT +KK G A
Sbjct: 22 PGVGRLTRRPQFLAVAGARRKWAAPGLILQARAHDERQHPRPDEPSVRVGFTASKKVGGA 81
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
VERNR RRRL+ AV G+D+VL+A+ + + P+ +L N ++R K
Sbjct: 82 VERNRARRRLRAAVAEVLAPHAAAGYDFVLVARGETVRRPWPDLKNDLATALKRLK 137
>gi|295398137|ref|ZP_06808186.1| ribonuclease P protein component [Aerococcus viridans ATCC 11563]
gi|294973656|gb|EFG49434.1| ribonuclease P protein component [Aerococcus viridans ATCC 11563]
Length = 125
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V G F + L + R+G +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFGQVFHHGHSTANRQFVIYRLEKDQ--PHFRIGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R++++++ G+ D+++IA++ A + E+ + + K
Sbjct: 59 VKRKIRQSITELKAGIDPSN-DFIVIARKPAADMTTAEVKKSLIHVLSLAK 108
>gi|326405711|gb|ADZ62782.1| ribonuclease P protein component [Lactococcus lactis subsp. lactis
CV56]
Length = 117
Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ + F + + F + LN N RVG +V+KK G AV RNR
Sbjct: 3 IKKTYRVKRSKDFDQIFSAQHSFANKKFVVYKLNTNQ--PHFRVGLSVSKKLGHAVLRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+ A+ + D+V+IA+ + F+E+ + ++ +K
Sbjct: 61 IKRLLRHAIAEFKPYLTDE--DFVIIARSGVETLSFEEVKKNLKHVLKLSK 109
>gi|227550638|ref|ZP_03980687.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257888097|ref|ZP_05667750.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257896285|ref|ZP_05675938.1| ribonuclease P [Enterococcus faecium Com12]
gi|257899269|ref|ZP_05678922.1| ribonuclease P [Enterococcus faecium Com15]
gi|293379366|ref|ZP_06625510.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
gi|293572716|ref|ZP_06683680.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|227180239|gb|EEI61211.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257824151|gb|EEV51083.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257832850|gb|EEV59271.1| ribonuclease P [Enterococcus faecium Com12]
gi|257837181|gb|EEV62255.1| ribonuclease P [Enterococcus faecium Com15]
gi|291607208|gb|EFF36566.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|292641889|gb|EFF60055.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
Length = 118
Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKEREFQAVFHTGDSFANRKFVVYRLKKP-GQPHFRVGLSVGKKVGNAVSRNE 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ AV + + D+++IA+ + + E+ ++ V ++ K
Sbjct: 60 VKRKIRAAV-YSIKEEIDPELDFIVIARPSVKGLTYDEVRSNLVHVLKLAK 109
>gi|15672110|ref|NP_266284.1| ribonuclease P [Lactococcus lactis subsp. lactis Il1403]
gi|281490608|ref|YP_003352588.1| ribonuclease P [Lactococcus lactis subsp. lactis KF147]
gi|13878722|sp|Q9CJ73|RNPA_LACLA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12722976|gb|AAK04226.1|AE006251_2 ribonuclease P protein component [Lactococcus lactis subsp. lactis
Il1403]
gi|281374414|gb|ADA63943.1| Ribonuclease P, protein component [Lactococcus lactis subsp. lactis
KF147]
Length = 117
Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ + F + + F + LN N RVG +V+KK G AV RNR
Sbjct: 3 IKKTYRVKRSKDFDQIFSAKHSFANKKFVVYKLNTNQ--PHFRVGLSVSKKLGHAVLRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+ A+ + D+V+IA+ + F+E+ + ++ +K
Sbjct: 61 IKRLLRHAIAEFKPYLTDE--DFVIIARSGVETLSFEEVKKNLKHVLKLSK 109
>gi|299135921|ref|ZP_07029105.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
gi|298602045|gb|EFI58199.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
Length = 173
Score = 77.2 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 6/121 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+K + +V K ++ + PR+G TV K G AV+RNR+
Sbjct: 48 RLRKHADYQIVYKAARKQFGKQIAYFHAPRPAERRSDTPGPRIGLTVPKALGKAVDRNRI 107
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+EAVR + D +L KR + F L R + +
Sbjct: 108 KRRLREAVRHALPLLTAP-VDVILHPKRSVIDADFAVLEREVSVIFRSVQAAAERASAKK 166
Query: 121 R 121
Sbjct: 167 T 167
>gi|162147921|ref|YP_001602382.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|209542538|ref|YP_002274767.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|226741389|sp|A9HKS8|RNPA_GLUDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161786498|emb|CAP56080.1| Ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530215|gb|ACI50152.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
Length = 116
Score = 76.8 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKKR +F V +G P L+ L ++S+ R+GFTVTKK G AV RNR RRRL
Sbjct: 7 RLKKRAEFLKVASRGRKVPSPGLVLQALGRDDSDP-ARIGFTVTKKVGNAVVRNRTRRRL 65
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+EAVR+ +G D VLI + F L +R+
Sbjct: 66 REAVRVVEREEPLNGVDLVLIGRDGTRGRTFAALVGDLRRTLRKA 110
>gi|268610506|ref|ZP_06144233.1| ribonuclease P protein component [Ruminococcus flavefaciens FD-1]
Length = 122
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I+ + F KKG + + V N R+G T KK G AV RNR
Sbjct: 1 MLYTKIMNDNKDFLTLYKKGRYAASKYSVIYV--RPNGRPFNRLGITAGKKVGNAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+R ++ A R +E + G D V++A+ I +E C + +
Sbjct: 59 AKRLIRLAYR-QSEVDMPVGMDIVIVARTAITTIKSQEYCGYMEK 102
>gi|297618526|ref|YP_003703685.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
gi|297146363|gb|ADI03120.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
Length = 112
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + L+KR+ F V KG+ G + L V N R G +KK G AV RN+
Sbjct: 2 LKSDQRLRKRKDFEKVYSKGKKVFGRYLILYVGENAAG--KNRYGIVASKKVGKAVIRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RRR++E R + L+ G+D ++I K F + + + ++R+K
Sbjct: 60 SRRRVREVAR-TLDSKLRQGYDVIVIVKPLCREADFASVKSDYERLLKRSK 109
>gi|269836197|ref|YP_003318425.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
gi|269785460|gb|ACZ37603.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
Length = 129
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L++ +F V+K G P + VL N+ R GF V ++ G A RNR
Sbjct: 2 IARALRLRRPFEFERVRKQGRSWATPLVVMAVLPNDLE--HNRYGFAVGRRIGKATARNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRNK 110
++R ++EAVR L+ G+D V IA+ + + ++ + R K
Sbjct: 60 VKRWMREAVRHLHPR-LRQGYDIVFIARGAVASPDVTYHQVFDAIATLTARAK 111
>gi|116510956|ref|YP_808172.1| ribonuclease P [Lactococcus lactis subsp. cremoris SK11]
gi|125623021|ref|YP_001031504.1| ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|123125967|sp|Q032X2|RNPA_LACLS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226721|sp|A2RHL3|RNPA_LACLM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116106610|gb|ABJ71750.1| ribonuclease P protein component [Lactococcus lactis subsp.
cremoris SK11]
gi|124491829|emb|CAL96749.1| Ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|300069768|gb|ADJ59168.1| ribonuclease P [Lactococcus lactis subsp. cremoris NZ9000]
Length = 117
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ + F + + F + LN N RVG +V+KK G AV RNR
Sbjct: 3 IKKTYRVKRSKDFDQIFSAKHSFANKRFVVYKLNTNQ--PHFRVGLSVSKKLGHAVLRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+ AV ++ D+V+IA+ + F+E+ + ++ +K
Sbjct: 61 IKRLLRHAVAEFKPYLVDE--DFVIIARSGVETLSFEEVKKNLRHVLKLSK 109
>gi|322437356|ref|YP_004219568.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
gi|321165083|gb|ADW70788.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
Length = 128
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 4 ICILKKRRQFALVKKGELRK-----GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
+ L+K + V ++ FFS+ + PRVG TV K G AV+RN
Sbjct: 9 LLRLRKHADYQRVYTSSRKQFSKQMSFFFSIRPEGRRSDTPGPRVGLTVGKVLGKAVDRN 68
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R++RRL+E VR A+ + D +L +R L + L + R + +
Sbjct: 69 RIKRRLRECVRHHAQTLTHP-VDVILHPRRTVLELESGHLEREIAQIFRTIQTTLNKA 125
>gi|154245866|ref|YP_001416824.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
gi|154159951|gb|ABS67167.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
Length = 187
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KRR F K E F ++ + ++ + RVGFTVTKK G +V RNR+RRRL+E
Sbjct: 4 LRKRRDFLAAAKAERAGATSFLMQGRDRGDAGTV-RVGFTVTKKTGNSVVRNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
AVR + G DYVL+A+ AL PF+ L VR+ G
Sbjct: 63 AVRRVLPDAGRAGFDYVLVAREAALRTPFETLVREIERSVRKVHTPKAPG 112
>gi|304405891|ref|ZP_07387549.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
gi|304345134|gb|EFM10970.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
Length = 115
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F+ + +G + F + + R+G + +KK G AV RNR
Sbjct: 1 MHRKLRLRNRADFSRIYRGGKSFANGQFVVYWSKQPAAEPF-RLGVSASKKIGNAVIRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
MRR +KE VRL AE + D +LI ++ A+ + KEL + +++
Sbjct: 60 MRRVVKEIVRLNAERIAPR-VDLILIVRKPAVDMKTKELERSVLHVLKKA 108
>gi|152990626|ref|YP_001356348.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
gi|166226729|sp|A6Q3D2|RNPA_NITSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151422487|dbj|BAF69991.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
Length = 109
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK +R+F V K G P+F L + + + R+GF +KK G AV+RNR
Sbjct: 1 MKGVQTLKTKREFDYVYKRGIAFHSPYFVLFYIPDKD----MRIGFVASKKVGKAVQRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R LK + L G YV +AK L FK + + + R KR
Sbjct: 57 AKRVLKALF-IQYFDQLPIGR-YVFVAKPKLLGADFKRIDQEMTKILERIKRRK 108
>gi|301067928|ref|YP_003789951.1| RNase P protein component [Lactobacillus casei str. Zhang]
gi|300440335|gb|ADK20101.1| RNase P protein component [Lactobacillus casei str. Zhang]
Length = 183
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
+KK +F V G+ F + + + RVG +V KK G AV RN+++R
Sbjct: 71 RIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRY 128
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++++++ + D+++IA++ A + + + +R
Sbjct: 129 IRQSLQELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|220905231|ref|YP_002480543.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254808064|sp|B8J2U6|RNPA_DESDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219869530|gb|ACL49865.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 130
Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +++R +F +G F + VL L R G V++K G AV RNR
Sbjct: 6 LPRQLRIRRRVEFTACYERGRRYHTEHFLVFVLPRACPGLRARTGMAVSRKVGKAVVRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA--LFIPFKELCNHFVERVRRNKRSYYSGK 117
++R L+E RL E L D V +AK+ A + + + + +RR R
Sbjct: 66 VKRLLREFYRLHREE-LPVEADIVTVAKKHAGEAALDYARVAAELLPLLRRMARHLPGSS 124
Query: 118 N 118
Sbjct: 125 A 125
>gi|257866273|ref|ZP_05645926.1| ribonuclease P [Enterococcus casseliflavus EC30]
gi|257873211|ref|ZP_05652864.1| ribonuclease P [Enterococcus casseliflavus EC10]
gi|257875891|ref|ZP_05655544.1| ribonuclease P [Enterococcus casseliflavus EC20]
gi|257800231|gb|EEV29259.1| ribonuclease P [Enterococcus casseliflavus EC30]
gi|257807375|gb|EEV36197.1| ribonuclease P [Enterococcus casseliflavus EC10]
gi|257810057|gb|EEV38877.1| ribonuclease P [Enterococcus casseliflavus EC20]
Length = 116
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + G F + VL S RVG +V KK G AV+RN
Sbjct: 6 MRKSYRVKTEQDFQKVFQAGNSFANRKFVVYVLPKEQS--HFRVGLSVGKKVGNAVKRNE 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + ++ D+++IA+ KE+ ++ ++ K
Sbjct: 64 IKRKIRASL-TEMKPRIEPAVDFIVIARPSIATCSSKEIYSNLEHVLKLAK 113
>gi|319651098|ref|ZP_08005232.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
gi|317397268|gb|EFV77972.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
Length = 90
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
R+G +V+KK G AV RN+++R +++A L E +K +D ++IA++ +
Sbjct: 2 RKEEQNHFRIGLSVSKKIGNAVMRNQIKRYIRQAF-LELEEEIKPQYDLIVIARKPVAEM 60
Query: 94 PFKELCNHFVERVR 107
F E+ + ++
Sbjct: 61 DFHEVKKSLIHVLK 74
>gi|195977383|ref|YP_002122627.1| ribonuclease P [Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|225869298|ref|YP_002745246.1| ribonuclease P protein component [Streptococcus equi subsp.
zooepidemicus]
gi|238689791|sp|B4U0S7|RNPA_STREM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494116|sp|C0MFG8|RNPA_STRS7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|195974088|gb|ACG61614.1| ribonuclease P protein component RnpA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225702574|emb|CAX00576.1| ribonuclease P protein component [Streptococcus equi subsp.
zooepidemicus]
Length = 119
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + R G +V KK G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFKLGQSMANRKFVIYHLK--GEHKHFRAGISVGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + D+V+IA+R A + ++ + + ++ K
Sbjct: 59 VKRKIRHVLMELGDHLKTE--DFVVIARRGAEELDYQAVKQNLHHVLKLAK 107
>gi|225869760|ref|YP_002745707.1| ribonuclease P protein component [Streptococcus equi subsp. equi
4047]
gi|254808088|sp|C0M7E1|RNPA_STRE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|225699164|emb|CAW92390.1| ribonuclease P protein component [Streptococcus equi subsp. equi
4047]
Length = 119
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + R G +V KK G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFKLGQSMANRKFVIYHLK--GEHKHFRAGISVGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + D+V+IA+R A + ++ + + ++ K
Sbjct: 59 VKRKIRHVLMELGDHLKSE--DFVVIARRGAEELDYQAVKQNLHHVLKLAK 107
>gi|167629169|ref|YP_001679668.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
gi|167591909|gb|ABZ83657.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
Length = 118
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRR 62
L++ F V K G+ G + L L ++ R GF+V+ K G A RNR++R
Sbjct: 7 RLRRNEDFQKVYKRGKSYGGQYVVLYRLQPRLPDIPSCRRFGFSVSSKVGKANVRNRVKR 66
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
L+E R G D +LIA+ IPF+++ ++ +R K
Sbjct: 67 MLREICRRH-GLRADDGSDIILIARSKIKGIPFRQVEQDVIKLFKRAK 113
>gi|325106611|ref|YP_004267679.1| ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
gi|324966879|gb|ADY57657.1| Ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
Length = 138
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
C +K +F + R G +L + N + R+G +V+KK G AV RNR +
Sbjct: 13 PRECRMKTPAEFQRAYARKQRAGDR-NLLIFCTPNGMTISRIGLSVSKKNGNAVCRNRKK 71
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI--PFKELCNHFVERVRRNKRSYYSGKNF 119
R L+EA RL L G DY+LI + D +++ + +++ R + +
Sbjct: 72 RLLREAFRLT-RHKLPIGFDYILIPRVDVQSTLEDYRKSLKYLTKKLARREAASNHQAAT 130
Query: 120 SRKS 123
+K+
Sbjct: 131 EQKT 134
>gi|104774818|ref|YP_619798.1| ribonuclease P [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|116514947|ref|YP_813853.1| ribonuclease P [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|122274321|sp|Q047F7|RNPA_LACDB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122983861|sp|Q1G7Z2|RNPA_LACDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|103423899|emb|CAI98941.1| Ribonuclease P, protein component [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116094262|gb|ABJ59415.1| RNase P protein component [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126647|gb|ADY85977.1| Ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 121
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL N RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKSEQDFQTVFENGESVANRAFVIYVLPRK-QNKHFRVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYAHDFDWEKTRENLLHAL 106
>gi|229551108|ref|ZP_04439833.1| ribonuclease P [Lactobacillus rhamnosus LMS2-1]
gi|229315569|gb|EEN81542.1| ribonuclease P [Lactobacillus rhamnosus LMS2-1]
Length = 170
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
+KK +F V G+ F + + + RVG +V KK G AV RN+++R
Sbjct: 58 RIKKEVEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRY 115
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++++ L + + D+++IA++ A + E + + +R
Sbjct: 116 IRQSL-LELKPEIDPQTDFLVIARKSANQLDMAETKKNLIHVMR 158
>gi|83594666|ref|YP_428418.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
gi|83577580|gb|ABC24131.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
Length = 174
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 11/121 (9%)
Query: 4 ICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNS----------NLLPRVGFTVTKKQG 52
+ LK+R F V P L+ RVGFT +KK G
Sbjct: 54 VGRLKQRADFLRVAGKRCKWAAPGLVLQAAVQPAPRAGRHPALPLPPPIRVGFTTSKKVG 113
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
AVERNR RRRL+ AV L K GHDYV+I + L PF L ++R
Sbjct: 114 NAVERNRARRRLRAAVDLVIATEAKGGHDYVVIGRAATLGRPFDLLVADLRAALKRLGMR 173
Query: 113 Y 113
Sbjct: 174 R 174
>gi|255016878|ref|ZP_05289004.1| ribonuclease P [Listeria monocytogenes FSL F2-515]
Length = 88
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ R+G +V+KK G AV RNR++R ++++ + +Y++IA++ A +
Sbjct: 3 KQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPEN-EYIIIARKPAANM 61
Query: 94 PFKELCNHFVERVR 107
F E+ + ++
Sbjct: 62 DFHEVKKSLIHVLK 75
>gi|326386365|ref|ZP_08207988.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209026|gb|EGD59820.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
Length = 119
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L V + R G TVT+K G AV RNRM+RR + +R G D+VLI +
Sbjct: 1 MLLVKPGVRAPAQARFGVTVTRKIGNAVFRNRMKRRFRALLREILPTRGLAGADHVLIGR 60
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+ F L + + R R
Sbjct: 61 EGGVERDFTLLRQELEQALARAVAGKGDPPRRPRD 95
>gi|94967250|ref|YP_589298.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
gi|94549300|gb|ABF39224.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
Length = 154
Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L + F LV + R N + PR+G+TV++ G AV+RNRM
Sbjct: 16 IPKASRLLRHADFRLVYEQGRRHFSANFTAFYRANITEKSPRIGYTVSRALGGAVDRNRM 75
Query: 61 RRRLKEAVRLCAEGVLKH-GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+RRL+EA R C G D V+ K+ L F L + + +++ SG+
Sbjct: 76 KRRLREATRACWAGFRPTFAVDVVVNPKKTVLATDFAVLTAEMQKALTVIEKAANSGQAN 135
Query: 120 SR 121
R
Sbjct: 136 PR 137
>gi|237752893|ref|ZP_04583373.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375160|gb|EEO25251.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 105
Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L ++ F V + + +F L + R+GF+V+KK G AV RNR++R
Sbjct: 1 MVTLNTKQDFNRVYRSQKRWHNAYFVLFFREDAQQ---KRIGFSVSKKVGNAVCRNRIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RL+ R + G D +L+AK + +K L +++ + R
Sbjct: 58 RLRAIYRESMLDL--RGGDMILLAKNGLDKVAYKTLQSNYKYALIR 101
>gi|256751457|ref|ZP_05492335.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749676|gb|EEU62702.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
Length = 86
Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ + NN RVG++V+KK G +V RNR+RR L E+ RL + +K G D + +A+
Sbjct: 1 MYYMENNLG--FNRVGYSVSKKIGKSVVRNRVRRLLHESFRL-LDIEIKTGFDIIFVARG 57
Query: 89 DALFIPFKELCNHFVERVRRN 109
+ F L N + + +
Sbjct: 58 KIVEADFHTLKNSMRKLIMKT 78
>gi|199598236|ref|ZP_03211657.1| RNase P protein component [Lactobacillus rhamnosus HN001]
gi|258509937|ref|YP_003172688.1| ribonuclease P [Lactobacillus rhamnosus GG]
gi|199590839|gb|EDY98924.1| RNase P protein component [Lactobacillus rhamnosus HN001]
gi|257149864|emb|CAR88837.1| Ribonuclease P protein component [Lactobacillus rhamnosus GG]
gi|259651197|dbj|BAI43359.1| ribonuclease P [Lactobacillus rhamnosus GG]
Length = 118
Score = 75.2 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEVEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ L + + D+++IA++ A + E + + +R
Sbjct: 59 QIKRYIRQSL-LELKPEIDPQTDFLVIARKSANQLDMAETKKNLIHVMR 106
>gi|168698919|ref|ZP_02731196.1| ribonuclease P protein component [Gemmata obscuriglobus UQM 2246]
Length = 163
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K +F + L V N PR+G +V++K G AV RNR +R +E
Sbjct: 12 MKTPAEFERCYTRKRSAADG-LLVVYACENGLAHPRLGCSVSRKVGNAVMRNRYKRLFRE 70
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
A RL ++ L G D +LI + + L V++ R R G
Sbjct: 71 AFRL-SQHDLPQGVDLILIPRPG-PYPELGALRASLVKQARYAARKLSEGP 119
>gi|89897805|ref|YP_521292.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
gi|89337253|dbj|BAE86848.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
Length = 117
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+++ + V +G+ G + + V + R GF +KK G AV RNR
Sbjct: 8 LQRSLRLRQKSLYRKVFAQGKSFSGKYVVIYV-----AEGPSRFGFIASKKVGNAVVRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E +RL +K + IA+ + + ++ N ++ + + K
Sbjct: 63 AKRLMREVIRLHLAE-MKENTQIICIARSSIKGVSYSQVENSLLKSLYKAK 112
>gi|262281817|ref|ZP_06059586.1| ribonuclease P protein component [Streptococcus sp. 2_1_36FAA]
gi|262262271|gb|EEY80968.1| ribonuclease P protein component [Streptococcus sp. 2_1_36FAA]
Length = 119
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + + F + L+ + RVG +V+KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFNAIFNDKQSVANKRFVIYKLDKDQK--HFRVGLSVSKKLGNAVVRNG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ L D+V+IA++ + +KE+ + + ++ K
Sbjct: 59 IKRKIRHV--LIEHRQELQPVDFVIIARKGVEELNYKEIERNLLHVLKLAK 107
>gi|254445016|ref|ZP_05058492.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
gi|198259324|gb|EDY83632.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
Length = 135
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKKQGCAVERNRM 60
L++ F ++ G+ + +F+L + PR+G + ++ G +V RN++
Sbjct: 11 SRLRRNADFLAIRGHGKPYRCQYFALFSRIRASEGADVSSPRIGISAARRVGNSVTRNKI 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RR +E RL ++ D VL ++ A ++EL F+ ++ K
Sbjct: 71 KRRFRELFRLHQHD-IRPEADIVLSLRQPAGNASYEELEQRFLHALKFKK 119
>gi|332522749|ref|ZP_08399001.1| ribonuclease P protein component [Streptococcus porcinus str.
Jelinkova 176]
gi|332314013|gb|EGJ26998.1| ribonuclease P protein component [Streptococcus porcinus str.
Jelinkova 176]
Length = 119
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L RVG +V+K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFGGGKSTANRKFVIHFLEKKQD--HFRVGISVSKRLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + + D+V+IA+R + ++ L + ++ K
Sbjct: 59 IKRKIRHILMEFKDHLKED--DFVVIARRGVEELDYQALRQNLKHVLKLAK 107
>gi|325567644|ref|ZP_08144311.1| ribonuclease P protein component [Enterococcus casseliflavus ATCC
12755]
gi|325159077|gb|EGC71223.1| ribonuclease P protein component [Enterococcus casseliflavus ATCC
12755]
Length = 119
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + G F + VL S RVG +V KK G AV+RN
Sbjct: 9 MRKSYRVKTEQDFQKVFQAGNSFANRKFVVYVLPKEQS--HFRVGLSVGKKVGNAVKRNE 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + ++ D+++IA+ KE+ ++ ++ K
Sbjct: 67 VKRKIRASL-TEMKPRIEPAIDFIVIARPSIATCSSKEIYSNLEHVLKLAK 116
>gi|167755167|ref|ZP_02427294.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|237733409|ref|ZP_04563890.1| ribonuclease P protein component [Mollicutes bacterium D7]
gi|167705217|gb|EDS19796.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|229383444|gb|EEO33535.1| ribonuclease P protein component [Coprobacillus sp. D7]
Length = 112
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K F+ + KK + F + L N+ R+G +V+KK G AV RN+
Sbjct: 1 MKKEFRVRKNEDFSRIIKKKQSMANRSFIIYYLKNDLD--HARIGISVSKKLGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+++ + L +DY++I + L + F N ++ +
Sbjct: 59 IKRQVR--MMLQQTINFDDNYDYIVIIRNKYLDLDFNSNLNELKYLYKKILKR 109
>gi|269798912|ref|YP_003312812.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
gi|269095541|gb|ACZ25532.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
Length = 121
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L ++ LV K G+ G L + R+GF KK GCAVERNR
Sbjct: 7 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQPT--RIGFVTGKKVGCAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + ++ G+ V++ + +++ + +R++K
Sbjct: 65 ARRLMKEVYRLN-QHAIREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|315925609|ref|ZP_07921819.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621150|gb|EFV01121.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 114
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
LK + F V +KG+ F L N R+G V+KK AV RN++RRR+
Sbjct: 6 LKSEKDFNDVFRKGQRFGNRHFQFYYLKNR--ENTNRLGIIVSKKVSKRAVVRNKIRRRI 63
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+EA RL G K G+D ++IAK + + E+ + + K
Sbjct: 64 REAYRLH-RGDFKTGYDLIIIAKERCVSATYAEIEHSLTHLFYKTK 108
>gi|315640359|ref|ZP_07895475.1| ribonuclease P protein component [Enterococcus italicus DSM 15952]
gi|315483895|gb|EFU74375.1| ribonuclease P protein component [Enterococcus italicus DSM 15952]
Length = 112
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + + F + VL RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKELDFQRVYQTKNSYANRKFIVYVLAKPEQKHF-RVGISVGKKVGNAVHRNA 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ +++ ++ D+++IA+ + +E+ ++
Sbjct: 60 VKRKIRASIQAMQAEIVAQ-QDFIVIARPGVSDLSSQEVYSNLKHVFA 106
>gi|227500988|ref|ZP_03931037.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
gi|227216761|gb|EEI82159.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
Length = 116
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K + F++ V NN PR GF+++KK G A RN
Sbjct: 1 MEKRISLRKDADFQRVYKRNQAFYNRDFTVLV--KNNGQKHPRFGFSISKKIGKANVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L++ +R+ + + D V+I K+ + + +L + + +
Sbjct: 59 LKRKLRDIIRINYGSI--NAVDVVIIPKKHTIDFTYDDLKKSLGHVLSKAFKKK 110
>gi|75677254|ref|YP_319675.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
gi|74422124|gb|ABA06323.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
Length = 111
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F G P F ++ ++ + R+GFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRADFLAAAHGPRVSTPAFVVQNRRRSDDGAI-RIGFTVTKKNGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
L+E V+ ++ DYV+I +R AL F + + ++R R +
Sbjct: 60 LRELVKRVDAVSMRPHSDYVIIGRRAALNRRFAVMLDDLRSALQRLDRRHP 110
>gi|327482913|gb|AEA86223.1| ribonuclease P [Pseudomonas stutzeri DSM 4166]
Length = 104
Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P ++ +L N PR+G + KK +VERNR++R+++E R + G D
Sbjct: 1 MPGRNVLLLARENDLQHPRLGLVIGKKSVKLSVERNRIKRQIRETFRHHQLELA--GWDI 58
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKR 111
V+IA++ + EL F + +R R
Sbjct: 59 VIIARKGLADLDNPELAKQFAKLWKRLSR 87
>gi|312901299|ref|ZP_07760582.1| ribonuclease P protein component [Enterococcus faecalis TX0470]
gi|311291676|gb|EFQ70232.1| ribonuclease P protein component [Enterococcus faecalis TX0470]
Length = 120
Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V K + F + VL RVG +V KK G AV RN
Sbjct: 3 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKPQQAHF-RVGISVGKKIGNAVTRNA 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 62 VKRKIRASL-FQLKDRISPEIDFIVIARPGLEKLSSEEVEANLTHVLNLAK 111
>gi|298528958|ref|ZP_07016361.1| ribonuclease P protein component [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510394|gb|EFI34297.1| ribonuclease P protein component [Desulfonatronospira thiodismutans
ASO3-1]
Length = 128
Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R QF G + F + V N R+G T ++K G AV RNR+
Sbjct: 7 PRHLRLVRRPQFQACYAGGRRYQTKHFIIFVRPNGRD--YWRLGITASRKIGPAVLRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERVRRNKRSY 113
+R ++EA RL + ++ G DYV+++K+ D + + ++ ++
Sbjct: 65 KRLVREAFRLN-QHLVPPGLDYVVVSKKRTDLPGLNLDMVQKQLMQLFQQIAPRT 118
>gi|238018225|ref|ZP_04598651.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC 17748]
gi|237864696|gb|EEP65986.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC 17748]
Length = 121
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L ++ LV K G+ G L + + R+GF KK GCAVERNR
Sbjct: 7 LKKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQST--RIGFVTGKKVGCAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL ++ G+ V++ + +++ + +R++K
Sbjct: 65 ARRLMKEVYRLNQHS-IREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|227518111|ref|ZP_03948160.1| ribonuclease P [Enterococcus faecalis TX0104]
gi|227555682|ref|ZP_03985729.1| ribonuclease P [Enterococcus faecalis HH22]
gi|229547132|ref|ZP_04435857.1| ribonuclease P [Enterococcus faecalis TX1322]
gi|229550702|ref|ZP_04439427.1| ribonuclease P [Enterococcus faecalis ATCC 29200]
gi|293382665|ref|ZP_06628593.1| ribonuclease P protein component [Enterococcus faecalis R712]
gi|293387923|ref|ZP_06632459.1| ribonuclease P protein component [Enterococcus faecalis S613]
gi|307268913|ref|ZP_07550277.1| ribonuclease P protein component [Enterococcus faecalis TX4248]
gi|307274009|ref|ZP_07555219.1| ribonuclease P protein component [Enterococcus faecalis TX0855]
gi|307276502|ref|ZP_07557622.1| ribonuclease P protein component [Enterococcus faecalis TX2134]
gi|307284056|ref|ZP_07564226.1| ribonuclease P protein component [Enterococcus faecalis TX0860]
gi|307287185|ref|ZP_07567256.1| ribonuclease P protein component [Enterococcus faecalis TX0109]
gi|307296587|ref|ZP_07576407.1| ribonuclease P protein component [Enterococcus faecalis TX0411]
gi|312903104|ref|ZP_07762285.1| ribonuclease P protein component [Enterococcus faecalis TX0635]
gi|312908817|ref|ZP_07767756.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 512]
gi|312951723|ref|ZP_07770617.1| ribonuclease P protein component [Enterococcus faecalis TX0102]
gi|312979541|ref|ZP_07791223.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 516]
gi|227074445|gb|EEI12408.1| ribonuclease P [Enterococcus faecalis TX0104]
gi|227175192|gb|EEI56164.1| ribonuclease P [Enterococcus faecalis HH22]
gi|229304135|gb|EEN70131.1| ribonuclease P [Enterococcus faecalis ATCC 29200]
gi|229307714|gb|EEN73701.1| ribonuclease P [Enterococcus faecalis TX1322]
gi|291079971|gb|EFE17335.1| ribonuclease P protein component [Enterococcus faecalis R712]
gi|291082660|gb|EFE19623.1| ribonuclease P protein component [Enterococcus faecalis S613]
gi|306495923|gb|EFM65511.1| ribonuclease P protein component [Enterococcus faecalis TX0411]
gi|306501783|gb|EFM71074.1| ribonuclease P protein component [Enterococcus faecalis TX0109]
gi|306503427|gb|EFM72676.1| ribonuclease P protein component [Enterococcus faecalis TX0860]
gi|306506829|gb|EFM75979.1| ribonuclease P protein component [Enterococcus faecalis TX2134]
gi|306509317|gb|EFM78377.1| ribonuclease P protein component [Enterococcus faecalis TX0855]
gi|306514721|gb|EFM83272.1| ribonuclease P protein component [Enterococcus faecalis TX4248]
gi|310625255|gb|EFQ08538.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 512]
gi|310630296|gb|EFQ13579.1| ribonuclease P protein component [Enterococcus faecalis TX0102]
gi|310633495|gb|EFQ16778.1| ribonuclease P protein component [Enterococcus faecalis TX0635]
gi|311287723|gb|EFQ66279.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 516]
gi|315026680|gb|EFT38612.1| ribonuclease P protein component [Enterococcus faecalis TX2137]
gi|315030125|gb|EFT42057.1| ribonuclease P protein component [Enterococcus faecalis TX4000]
gi|315033560|gb|EFT45492.1| ribonuclease P protein component [Enterococcus faecalis TX0017]
gi|315036383|gb|EFT48315.1| ribonuclease P protein component [Enterococcus faecalis TX0027]
gi|315143598|gb|EFT87614.1| ribonuclease P protein component [Enterococcus faecalis TX2141]
gi|315148264|gb|EFT92280.1| ribonuclease P protein component [Enterococcus faecalis TX4244]
gi|315151288|gb|EFT95304.1| ribonuclease P protein component [Enterococcus faecalis TX0012]
gi|315153714|gb|EFT97730.1| ribonuclease P protein component [Enterococcus faecalis TX0031]
gi|315155126|gb|EFT99142.1| ribonuclease P protein component [Enterococcus faecalis TX0043]
gi|315158744|gb|EFU02761.1| ribonuclease P protein component [Enterococcus faecalis TX0312]
gi|315163328|gb|EFU07345.1| ribonuclease P protein component [Enterococcus faecalis TX0645]
gi|315165731|gb|EFU09748.1| ribonuclease P protein component [Enterococcus faecalis TX1302]
gi|315168217|gb|EFU12234.1| ribonuclease P protein component [Enterococcus faecalis TX1341]
gi|315170516|gb|EFU14533.1| ribonuclease P protein component [Enterococcus faecalis TX1342]
gi|315174185|gb|EFU18202.1| ribonuclease P protein component [Enterococcus faecalis TX1346]
gi|315573994|gb|EFU86185.1| ribonuclease P protein component [Enterococcus faecalis TX0309B]
gi|315578836|gb|EFU91027.1| ribonuclease P protein component [Enterococcus faecalis TX0630]
gi|315581945|gb|EFU94136.1| ribonuclease P protein component [Enterococcus faecalis TX0309A]
gi|327536430|gb|AEA95264.1| ribonuclease P [Enterococcus faecalis OG1RF]
gi|329576313|gb|EGG57828.1| ribonuclease P protein component [Enterococcus faecalis TX1467]
Length = 120
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V K + F + VL RVG +V KK G AV RN
Sbjct: 3 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKPQQAHF-RVGISVGKKIGNAVTRNA 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 62 VKRKIRASL-FQLKDRISPEIDFIVIARPGLEKLSSEEVKANLTHVLNLAK 111
>gi|157151601|ref|YP_001449499.1| ribonuclease P [Streptococcus gordonii str. Challis substr. CH1]
gi|189043750|sp|A8AUN9|RNPA_STRGC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157076395|gb|ABV11078.1| ribonuclease P protein component [Streptococcus gordonii str.
Challis substr. CH1]
Length = 119
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + + F + L+ + RVG +V+KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFNAIFNDKQSVANKRFVIYKLDKDQK--HFRVGLSVSKKLGNAVVRNG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ L D+V+IA++ + +KE + + ++ K
Sbjct: 59 IKRKIRHV--LIEHRQELQAVDFVIIARKGVEELDYKETERNLLHVLKLAK 107
>gi|294792399|ref|ZP_06757546.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
gi|294456298|gb|EFG24661.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
Length = 119
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L ++ LV K G+ G L + R+GF KK GCAVERNR
Sbjct: 5 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQPT--RIGFVTGKKVGCAVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL ++ G+ V++ + +++ + +R++K
Sbjct: 63 ARRLMKEVYRLNQHS-IREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 112
>gi|304322172|ref|YP_003855815.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
gi|303301074|gb|ADM10673.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
Length = 112
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S + L KRR F +++G P F L+V N+ S R+GFTVTKK G AV RNR++
Sbjct: 4 SRVERLTKRRDFLSLRRGRRINRPTFLLQVAPNDLS--ATRIGFTVTKKHGNAVRRNRLK 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRL+ AV + +K G+D IA+ P+ L + +
Sbjct: 62 RRLRAAVESLSSSSVKPGYDLNFIARPALGARPWPLLLDDVRGAL 106
>gi|313889852|ref|ZP_07823494.1| ribonuclease P protein component [Streptococcus pseudoporcinus SPIN
20026]
gi|313121897|gb|EFR44994.1| ribonuclease P protein component [Streptococcus pseudoporcinus SPIN
20026]
Length = 119
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L RVG +V+K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFGGGKSTANRKFVIHFLEKKQD--HFRVGISVSKRLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + + D+V++A+R + ++ L + ++ K
Sbjct: 59 IKRKIRHILMEFKDYLKED--DFVVVARRGVEELDYQALRQNLKHVLKLAK 107
>gi|83313453|ref|YP_423717.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
gi|123540375|sp|Q2VZ17|RNPA_MAGSA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|82948294|dbj|BAE53158.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
Length = 133
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLP---RVGFTVTKKQGCAVER 57
+ + LKKR F V + P L+ + ++L RVGFTV+KK G +V R
Sbjct: 3 ARLDRLKKRADFLRVAALRRKWAAPGLILQAAPASGTDLQADSLRVGFTVSKKVGNSVCR 62
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
NR RRRL+EAV G DYV+I +++ L P+ L + ++R +
Sbjct: 63 NRARRRLREAVAQVFPAHASAGLDYVVIGRKETLERPYSLLLQDLLAALKRVGALQKT 120
>gi|313893504|ref|ZP_07827074.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
gi|313441947|gb|EFR60369.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
Length = 121
Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L ++ LV K G+ G L + + R+GF KK GCAVERNR
Sbjct: 7 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQS--MRIGFVTGKKVGCAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL ++ G+ V++ + +++ + +R++K
Sbjct: 65 ARRLMKEVYRLNQHS-IREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|332687275|ref|YP_004457049.1| ribonuclease P protein component [Melissococcus plutonius ATCC
35311]
gi|332371284|dbj|BAK22240.1| ribonuclease P protein component [Melissococcus plutonius ATCC
35311]
Length = 112
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + F + L RVG +V KK G AV RN
Sbjct: 1 MKKAYRVKSEKDFQKVFYAKNSCANKRFVVYSLEKPEQKHF-RVGISVGKKVGNAVVRNS 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ ++ E +L +D+++IA+ + +E+ + + ++
Sbjct: 60 VKRKIRMSIYQLKEQILSE-YDFIIIARPGVQNLTSEEVRINLIHILK 106
>gi|307265439|ref|ZP_07546995.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919553|gb|EFN49771.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 86
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ + NN RVG++V+KK G +V RNR+RR L E+ R + +K G D + +A+
Sbjct: 1 MYYMENNLG--FNRVGYSVSKKIGKSVVRNRVRRLLHESFRF-LDIEIKTGFDIIFVARG 57
Query: 89 DALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+ F L N + + K Y+G
Sbjct: 58 KIVEADFHTLKNSMRKLI--MKTPLYAGNER 86
>gi|227543717|ref|ZP_03973766.1| ribonuclease P [Lactobacillus reuteri CF48-3A]
gi|300908782|ref|ZP_07126245.1| ribonuclease P [Lactobacillus reuteri SD2112]
gi|77745309|gb|ABB02555.1| RNase p protein component [Lactobacillus reuteri]
gi|227186285|gb|EEI66356.1| ribonuclease P [Lactobacillus reuteri CF48-3A]
gi|300894189|gb|EFK87547.1| ribonuclease P [Lactobacillus reuteri SD2112]
Length = 117
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVVYQMEKPGQKHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + L + L+ D+++IA+ A + E + V ++R
Sbjct: 60 VKRRIRQTL-LEVKPQLRSDVDFLVIARPAADGLSMAETKKNLVHVLKRA 108
>gi|113478083|ref|YP_724144.1| ribonuclease P [Trichodesmium erythraeum IMS101]
gi|110169131|gb|ABG53671.1| ribonuclease P protein component [Trichodesmium erythraeum IMS101]
Length = 159
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNS------------NLLPRVGFTV 47
+ + L+ + F+ V KG + SL L + + R+G ++
Sbjct: 26 LPDESRLRHHKDFSAVYQKGIRKNTSHLSLRALRHMQQPQLIEHSDQLYPDRPTRIGISI 85
Query: 48 TKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+KK AV RNR++R+++ A+R + K G D V++ K A + E + +
Sbjct: 86 SKKVNKGAVVRNRIKRQIRAALRQMLPYISK-GWDLVIVVKPTAKQCNYYEFLQQLEKLL 144
Query: 107 RR 108
+
Sbjct: 145 AQ 146
>gi|282848768|ref|ZP_06258163.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294794205|ref|ZP_06759341.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
gi|282581554|gb|EFB86942.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294454535|gb|EFG22908.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
Length = 119
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L ++ LV K G+ G L + R+GF KK GCAVERNR
Sbjct: 5 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQPT--RIGFVTGKKVGCAVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + ++ G+ V++ + +++ + +R++K
Sbjct: 63 ARRLMKEVYRLN-QHAIREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 112
>gi|259502132|ref|ZP_05745034.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
gi|259169945|gb|EEW54440.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
Length = 118
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFIIYQMAKPGQKHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++++ L + L+ D+++IA+ A + E+ + V ++R
Sbjct: 60 VKRRIRQSL-LEVKPQLRSDVDFLVIARPAADGLEMAEVKKNLVHALKRA 108
>gi|116496324|ref|YP_808058.1| RNase P protein component [Lactobacillus casei ATCC 334]
gi|116106474|gb|ABJ71616.1| RNase P protein component [Lactobacillus casei ATCC 334]
Length = 183
Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
+KK +F V G+ F + + + RVG +V KK G AV RN+++R
Sbjct: 71 RIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRY 128
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++++ + D+++IA++ A + + + +R
Sbjct: 129 IRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|303325517|ref|ZP_07355960.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
gi|302863433|gb|EFL86364.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
Length = 127
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+++R +F +G F L VL + R G V++K G AV RNR+
Sbjct: 7 PRHVRVRRRAEFTACYERGRRYHTEHFLLFVLPREHVGDCTRTGMAVSRKVGNAVVRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERV 106
+R L+E RL ++ +L D V +AKR + + F+ +
Sbjct: 67 KRLLREFFRLHSD-LLPVHADLVAVAKRHTGGDALDLSRVTAEFLPLL 113
>gi|227533509|ref|ZP_03963558.1| ribonuclease P protein component (RNaseP protein) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227188838|gb|EEI68905.1| ribonuclease P protein component (RNaseP protein) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 174
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
+KK +F V G+ F + + + RVG +V KK G AV RN+++R
Sbjct: 62 RIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRY 119
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++++ + D+++IA++ A + + + +R
Sbjct: 120 IRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 162
>gi|148545142|ref|YP_001272512.1| ribonuclease P [Lactobacillus reuteri DSM 20016]
gi|184154474|ref|YP_001842815.1| ribonuclease P [Lactobacillus reuteri JCM 1112]
gi|227364305|ref|ZP_03848398.1| ribonuclease P [Lactobacillus reuteri MM2-3]
gi|325683504|ref|ZP_08163020.1| ribonuclease P protein component [Lactobacillus reuteri MM4-1A]
gi|166991078|sp|A5VMV1|RNPA_LACRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229470480|sp|B2GA53|RNPA_LACRJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148532176|gb|ABQ84175.1| ribonuclease P protein component [Lactobacillus reuteri DSM 20016]
gi|183225818|dbj|BAG26335.1| ribonuclease P [Lactobacillus reuteri JCM 1112]
gi|227070618|gb|EEI08948.1| ribonuclease P [Lactobacillus reuteri MM2-3]
gi|324977854|gb|EGC14805.1| ribonuclease P protein component [Lactobacillus reuteri MM4-1A]
Length = 117
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKESEFQRVFETHNSVANHKFVVYQMEKPGQKHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + L + L+ D+++IA+ A + E + V + R
Sbjct: 60 VKRRIRQTL-LEVKPQLRSDVDFLVIARSAADGLSMAETKKNLVHVLNRA 108
>gi|169351634|ref|ZP_02868572.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
gi|169291856|gb|EDS73989.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
Length = 112
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F+ + K+ + F + L N+ R+G +V+KK G AV RN+
Sbjct: 1 MKKEYRVKKNEDFSRIIKRKQSMANRTFIIYYLKNDIG--HARIGISVSKKLGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+++ V+ L +DY++I + L + F F + +
Sbjct: 59 IKRQVRMIVKETIN--LDDNYDYIVIVRNKFLDLNFTSNLKEFNYLYEKILKR 109
>gi|239630801|ref|ZP_04673832.1| RNase P protein [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239527084|gb|EEQ66085.1| RNase P protein [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 118
Score = 74.1 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R ++++++ + D+++IA++ A + + + +R
Sbjct: 59 QIKRYIRQSLQELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 106
>gi|29377773|ref|NP_816927.1| ribonuclease P [Enterococcus faecalis V583]
gi|255971547|ref|ZP_05422133.1| ribonuclease P protein component [Enterococcus faecalis T1]
gi|255974520|ref|ZP_05425106.1| ribonuclease P protein component [Enterococcus faecalis T2]
gi|256618529|ref|ZP_05475375.1| ribonuclease P protein component [Enterococcus faecalis ATCC 4200]
gi|256761852|ref|ZP_05502432.1| ribonuclease P protein component [Enterococcus faecalis T3]
gi|256854979|ref|ZP_05560340.1| ribonuclease P protein component [Enterococcus faecalis T8]
gi|256957017|ref|ZP_05561188.1| ribonuclease P protein component [Enterococcus faecalis DS5]
gi|256960827|ref|ZP_05564998.1| ribonuclease P protein component [Enterococcus faecalis Merz96]
gi|256963981|ref|ZP_05568152.1| ribonuclease P protein component [Enterococcus faecalis HIP11704]
gi|257078695|ref|ZP_05573056.1| ribonuclease P protein component [Enterococcus faecalis JH1]
gi|257081345|ref|ZP_05575706.1| ribonuclease P protein component [Enterococcus faecalis E1Sol]
gi|257084002|ref|ZP_05578363.1| ribonuclease P protein component [Enterococcus faecalis Fly1]
gi|257087832|ref|ZP_05582193.1| ribonuclease P protein component [Enterococcus faecalis D6]
gi|257088484|ref|ZP_05582845.1| ribonuclease P [Enterococcus faecalis CH188]
gi|257417423|ref|ZP_05594417.1| ribonuclease P protein component [Enterococcus faecalis AR01/DG]
gi|257418844|ref|ZP_05595838.1| ribonuclease P [Enterococcus faecalis T11]
gi|257421341|ref|ZP_05598331.1| ribonuclease P [Enterococcus faecalis X98]
gi|294781246|ref|ZP_06746593.1| ribonuclease P protein component [Enterococcus faecalis PC1.1]
gi|300862024|ref|ZP_07108104.1| ribonuclease P protein component [Enterococcus faecalis TUSoD Ef11]
gi|48474385|sp|Q82YV0|RNPA_ENTFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29345241|gb|AAO82997.1| ribonuclease P protein component [Enterococcus faecalis V583]
gi|255962565|gb|EET95041.1| ribonuclease P protein component [Enterococcus faecalis T1]
gi|255967392|gb|EET98014.1| ribonuclease P protein component [Enterococcus faecalis T2]
gi|256598056|gb|EEU17232.1| ribonuclease P protein component [Enterococcus faecalis ATCC 4200]
gi|256683103|gb|EEU22798.1| ribonuclease P protein component [Enterococcus faecalis T3]
gi|256709492|gb|EEU24539.1| ribonuclease P protein component [Enterococcus faecalis T8]
gi|256947513|gb|EEU64145.1| ribonuclease P protein component [Enterococcus faecalis DS5]
gi|256951323|gb|EEU67955.1| ribonuclease P protein component [Enterococcus faecalis Merz96]
gi|256954477|gb|EEU71109.1| ribonuclease P protein component [Enterococcus faecalis HIP11704]
gi|256986725|gb|EEU74027.1| ribonuclease P protein component [Enterococcus faecalis JH1]
gi|256989375|gb|EEU76677.1| ribonuclease P protein component [Enterococcus faecalis E1Sol]
gi|256992032|gb|EEU79334.1| ribonuclease P protein component [Enterococcus faecalis Fly1]
gi|256995862|gb|EEU83164.1| ribonuclease P protein component [Enterococcus faecalis D6]
gi|256997296|gb|EEU83816.1| ribonuclease P [Enterococcus faecalis CH188]
gi|257159251|gb|EEU89211.1| ribonuclease P protein component [Enterococcus faecalis ARO1/DG]
gi|257160672|gb|EEU90632.1| ribonuclease P [Enterococcus faecalis T11]
gi|257163165|gb|EEU93125.1| ribonuclease P [Enterococcus faecalis X98]
gi|294451709|gb|EFG20164.1| ribonuclease P protein component [Enterococcus faecalis PC1.1]
gi|295112339|emb|CBL30976.1| ribonuclease P protein component, eubacterial [Enterococcus sp.
7L76]
gi|300848549|gb|EFK76306.1| ribonuclease P protein component [Enterococcus faecalis TUSoD Ef11]
gi|323479238|gb|ADX78677.1| ribonuclease P protein component [Enterococcus faecalis 62]
Length = 118
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V K + F + VL RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKPQQAHF-RVGISVGKKIGNAVTRNA 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 60 VKRKIRASL-FQLKDRISPEIDFIVIARPGLEKLSSEEVKANLTHVLNLAK 109
>gi|320527121|ref|ZP_08028308.1| ribonuclease P protein component [Solobacterium moorei F0204]
gi|320132449|gb|EFW24992.1| ribonuclease P protein component [Solobacterium moorei F0204]
Length = 110
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F ++KKG P F + R+G +V+KK G AV RN
Sbjct: 1 MKVKNRIKKSEEFQSMIKKGTKVVNPSFVIYYQPKEKDE--ARIGISVSKKLGNAVHRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ + +D V+I + + + ++E N+ + + + K
Sbjct: 59 YKRQVRMMCHELVDFQ-NTNYDMVMIIRFNYSSLSYEENKNNLEKLLIKAK 108
>gi|313681704|ref|YP_004059442.1| ribonuclease p protein component [Sulfuricurvum kujiense DSM 16994]
gi|313154564|gb|ADR33242.1| ribonuclease P protein component [Sulfuricurvum kujiense DSM 16994]
Length = 114
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+LK +F V +G+ +L L +VG+T +KK G AV RNR +RRL
Sbjct: 1 MLKLHSEFQRVYQRGKNAHSTSIALFYLPLAGE---KKVGYTASKKVGNAVVRNRCKRRL 57
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ + ++ G YV +AK+ PF + ++R
Sbjct: 58 RALFDEFSPS-VQDGW-YVFVAKKGLFDNPFDTVRRDCKYVLKRT 100
>gi|241889068|ref|ZP_04776372.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
gi|241864317|gb|EER68695.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
Length = 114
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F +++K + F + NN R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRVKRSQDFDNIIRKKQSFANRQFVIYYQKNNLD--HMRLGISVSKKLGKAFERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E + L +D ++IA+ A +PF E + ++R+K
Sbjct: 59 IKRYIRETFKT--RKELVKNYDIIVIARPGAKDMPFLEFGSSIDHVLKRSK 107
>gi|307152651|ref|YP_003888035.1| ribonuclease P protein component [Cyanothece sp. PCC 7822]
gi|306982879|gb|ADN14760.1| ribonuclease P protein component [Cyanothece sp. PCC 7822]
Length = 123
Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL-----NNNNSNLLPRVGFTVTKKQ-GC 53
+ LK+R+ F V K G P + L N+ + G +V++K
Sbjct: 3 LPQEHRLKRRQDFQKVYKQGGRYSSPHLIIRTLFEAYLENSIGSQPSCFGISVSQKVSKK 62
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++R +++A+R + G V++ + +L ++ + + + +
Sbjct: 63 AVGRNRLKRLIRKAIRQLLPEIA-PGWKVVIVVRAGSLECKYEHFLRELKQLLIKAE 118
>gi|322386703|ref|ZP_08060328.1| ribonuclease P protein component [Streptococcus cristatus ATCC
51100]
gi|321269376|gb|EFX52311.1| ribonuclease P protein component [Streptococcus cristatus ATCC
51100]
Length = 119
Score = 73.7 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MRKNYRVKSEKDFKAIFKAGQNFANRKFVVYKLEKEQ--RHFRVGISVSKKLGNAVVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + K D+V+IA++ + + ++ + + ++
Sbjct: 59 IKRKIRHVLIQHRADLTKD--DFVVIARKGVETLDYHQVEQNLLHVLK 104
>gi|291543428|emb|CBL16537.1| ribonuclease P protein component, eubacterial [Ruminococcus sp.
18P13]
Length = 114
Score = 73.7 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+L + + F K+G L V N R+G T KK G AV RNR +R +
Sbjct: 1 MLNQNKDFLALYKRGVCIPLRHVVLYVRRNRFG--FNRLGVTAGKKLGNAVCRNRAKRLI 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
++A R E +L G D V++A+ L I EL
Sbjct: 59 RQAYRET-EALLPCGVDLVIVARSSILQIKSPELTALLA 96
>gi|194467401|ref|ZP_03073388.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
gi|194454437|gb|EDX43334.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
Length = 117
Score = 73.7 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVVYQMEKPGQKHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + L + L+ D+++IA+ A + E + V ++R
Sbjct: 60 VKRRIRQTL-LEVKPQLRSDVDFLVIARSAADGLSMAETKKNLVHVLKRA 108
>gi|92119161|ref|YP_578890.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
gi|91802055|gb|ABE64430.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
Length = 111
Score = 73.3 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F G P F ++ N+ + R+GFTVTKK G A ERNR+RRR
Sbjct: 1 MDRLRQRAAFLAAANGLRVNAPAFVVQNRRRNDDGPI-RIGFTVTKKNGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
L+E V+ ++ DYV+I +R AL F + + R R +
Sbjct: 60 LRELVKRVDAVSMRPHSDYVVIGRRAALDRGFAVMLDDLRSAFNRLDRQHP 110
>gi|291457889|ref|ZP_06597279.1| ribonuclease P protein component [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419433|gb|EFE93152.1| ribonuclease P protein component [Oribacterium sp. oral taxon 078
str. F0262]
Length = 121
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + +G+ R ++ V N R+G + +KK G +V R+
Sbjct: 1 MKRFPSVKKSADYQRAYQRGKSRANDCLAVYVFPNGMEG--NRLGISCSKKIGNSVVRHG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ R+L+E R LK G D +++ ++ + ++++ ++E R+
Sbjct: 59 LARKLREIFRRN--KNLKQGLDIIVVVRKASASADYRKIERAYLELCSRH 106
>gi|219670953|ref|YP_002461388.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
gi|219541213|gb|ACL22952.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
Length = 111
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+++ + V +G+ G + + V + R GF +KK G AV RNR
Sbjct: 2 LQRSLRLRQKSLYRKVFAQGKSFSGKYVVIYV-----AEGPSRFGFIASKKVGNAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E +RL +K + IA+ + + ++ N ++ + + K
Sbjct: 57 AKRLMREVIRLHLAE-MKENTQIICIARSSIKGVSYSQVENSLLKSLYKAK 106
>gi|258541101|ref|YP_003175600.1| ribonuclease P [Lactobacillus rhamnosus Lc 705]
gi|257152777|emb|CAR91749.1| Ribonuclease P protein component [Lactobacillus rhamnosus Lc 705]
Length = 118
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEVEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++ +++++ L + + D+++IA++ A + E + + +R
Sbjct: 59 QIKHYIRQSL-LELKPEIDPQTDFLVIARKSANQLDMAETKKNLIHVMR 106
>gi|160944269|ref|ZP_02091498.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
gi|158444451|gb|EDP21455.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
Length = 166
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL N RVG T TKK G AV+RNR RR +K
Sbjct: 37 IRRNSEFGRVYARGKSYVNPALVLYVLKTRGRNT--RVGLTATKKIGHAVQRNRARRVMK 94
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A+ + + G+D + +A+ + +L + + + + + ++
Sbjct: 95 AAIDEHLDYNI-GGYDLIFVARGMTPKLKSWQLSSVVAKLFAQAGLPDKAKRPDAKPP 151
>gi|227432920|ref|ZP_03914863.1| ribonuclease P protein component [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351321|gb|EEJ41604.1| ribonuclease P protein component [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 116
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +F + ++ RVG +V+KK G A ER
Sbjct: 1 MRKTFRIKKPEEFQHVFNKHCSVANKYFIVYQMDKPEQKHF-RVGLSVSKKVGKAHERVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ L + L D ++IA+ A K L N + ++ K
Sbjct: 60 VKRRIRQSL-LELKPELPQELDLLVIARPAAAHRSQKFLKNQMIHVLKLAK 109
>gi|300812004|ref|ZP_07092460.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497030|gb|EFK32096.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 121
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEQDFQTVFENGESVANRAFVIYVLPRK-QNKHFRVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYARDFDWEKTRENLLHAL 106
>gi|218781969|ref|YP_002433287.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
gi|226736859|sp|B8FMU9|RNPA_DESAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218763353|gb|ACL05819.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
Length = 118
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+KR QF + ++G+ + +F + R+G TVTKK G AV RNR++R +
Sbjct: 11 RLRKRPQFLALGERGKRVQNAYFIAVFAP--AQGKVSRLGVTVTKKVGDAVTRNRIKRCV 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E RL LK D +IAK+ L R
Sbjct: 69 REYFRLNQHR-LKAPVDINVIAKKACCQQESPLLAASLDHLFNR 111
>gi|293374953|ref|ZP_06621249.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325844330|ref|ZP_08168106.1| ribonuclease P protein component [Turicibacter sp. HGF1]
gi|292646430|gb|EFF64444.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325489197|gb|EGC91579.1| ribonuclease P protein component [Turicibacter sp. HGF1]
Length = 113
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + V K G + P+F + ++ R+ +V KK G AVERN+
Sbjct: 1 MQKNYRIKKSSEIEQVMKNGRSKANPYFIVYKYKKTDNENF-RIAISVGKKIGNAVERNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R ++ V + + +DY +IA++ + + + ++
Sbjct: 60 VKRYIR-NVTTEHKQTIDSNYDYFVIARKGVKELDYVSFKEKLEQLYKKM 108
>gi|291277162|ref|YP_003516934.1| ribonuclease P protein component [Helicobacter mustelae 12198]
gi|290964356|emb|CBG40206.1| ribonuclease P protein component [Helicobacter mustelae 12198]
Length = 109
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK ++ F V K G+ F + VL N +G +V+KK G A RN+++R
Sbjct: 1 MQSLKTKQDFDFVYKRGKRIYAKSFLIYVLKNQKQETF--LGLSVSKKIGIACRRNQIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R + L + +++ K + L F +L N F++ ++
Sbjct: 59 RFRAICHLHQNKL--QSLSLIIVPKIEILASSFSDLENDFLKCIK 101
>gi|116619135|ref|YP_819506.1| RNase P protein component [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122270665|sp|Q03UI9|RNPA_LEUMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116097982|gb|ABJ63133.1| RNase P protein component [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 116
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K +F + ++ RVG +V+KK G A ER
Sbjct: 1 MRKTFRIKKPEEFQHVFNKHRSVANKYFIVYQMDKPEQKHF-RVGLSVSKKVGKAHERVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ L + L D ++IA+ A K L N + ++ K
Sbjct: 60 VKRRIRQSL-LELKPELPQELDLLVIARPAAAHRSQKFLKNQMIHVLKLAK 109
>gi|312869219|ref|ZP_07729391.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
gi|311095240|gb|EFQ53512.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
Length = 118
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFIIYQMAKPGQKHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++++ L + L+ D+++IA+ A + E + V ++R
Sbjct: 60 VKRRIRQSL-LEVKPQLRSDVDFLVIARPAADGLEMAETKKNLVHALKRA 108
>gi|83859294|ref|ZP_00952815.1| ribonuclease P protein component [Oceanicaulis alexandrii HTCC2633]
gi|83852741|gb|EAP90594.1| ribonuclease P protein component [Oceanicaulis alexandrii HTCC2633]
Length = 131
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRM 60
+ +RR F ++ P +++L + P R GFT TKK G AV RNR
Sbjct: 4 DRAARITERRDFLRAREAPRSAKPSVVIQMLVRKDDRDGPTRAGFTATKKIGNAVARNRA 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+ A RL + G DYV IA+ + L + + R S
Sbjct: 64 KRRLRAAARLLLPLHGQPGTDYVFIARAQTAARSWPALLDDVKAALISLARRERGPTGGS 123
Query: 121 RK 122
R
Sbjct: 124 RD 125
>gi|327383981|gb|AEA55457.1| Ribonuclease P protein component [Lactobacillus casei LC2W]
gi|327387165|gb|AEA58639.1| Ribonuclease P protein component [Lactobacillus casei BD-II]
Length = 183
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
+KK +F V G+ F + + + RVG +V KK G AV RN+++R
Sbjct: 71 RIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRY 128
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++++ + D+++IA++ A + + + +R
Sbjct: 129 IRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|256848508|ref|ZP_05553950.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
gi|256714775|gb|EEU29754.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
Length = 119
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 6 MRKSFRVKKENEFQRVFETHNSVANHKFVIYQMEKP-GQPHFRVGISVGKKIGNAVHRNW 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + L + LK D+++IA+ A + E + V ++R
Sbjct: 65 LKRRIRQTL-LEVKPQLKSEVDFLVIARPAADGMTMAETKKNLVHALKRA 113
>gi|227529864|ref|ZP_03959913.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
gi|227350233|gb|EEJ40524.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
Length = 118
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V K+ G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVIYQMAKPGQKHF-RVGISVGKRIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + L + L+ D+++IA+ A + E + V ++R
Sbjct: 60 VKRRIRQTL-LEVKPYLRQDVDFLVIARPAADGLEMAETKKNLVHALKRA 108
>gi|125718924|ref|YP_001036057.1| ribonuclease P protein component [Streptococcus sanguinis SK36]
gi|125498841|gb|ABN45507.1| Ribonuclease P protein component, putative [Streptococcus sanguinis
SK36]
Length = 88
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +
Sbjct: 3 EKEQKHFRVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELD 60
Query: 95 FKELCNHFVERVRRNK 110
+ ++ + + ++ K
Sbjct: 61 YHQVEQNLLHVLKIAK 76
>gi|189485050|ref|YP_001955991.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287009|dbj|BAG13530.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 139
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 11 RQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ F + K G + + V N+ +++ R+G TK+ G AV RNR +RRL+E R
Sbjct: 35 KDFDKIFKNGLRLENKNIKILVYKRNDGHIIRRLGLITTKRVGAAVIRNRTKRRLREIFR 94
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ L+ G D + I+K + + L + + ++
Sbjct: 95 TN-KHFLESGLDLIFISKPGTALLDYDSLKKNILGLLK 131
>gi|191639867|ref|YP_001989033.1| ribonuclease P [Lactobacillus casei BL23]
gi|238693017|sp|B3WBV6|RNPA_LACCB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|190714169|emb|CAQ68175.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Lactobacillus casei BL23]
Length = 118
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + + + +R
Sbjct: 59 QIKRYIRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 106
>gi|329768088|ref|ZP_08259597.1| ribonuclease P [Gemella haemolysans M341]
gi|328838243|gb|EGF87855.1| ribonuclease P [Gemella haemolysans M341]
Length = 114
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F +++K + F + NN R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRVKRSQDFDNIIRKKQSFANRQFVIYYQKNNLD--HMRLGISVSKKLGKAFERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E + E V +D ++IA+ A +PF E + ++R+K
Sbjct: 59 IKRYIRETFKTRKEYV--KNYDIIVIARPGAKELPFLEFGSSIDHVLKRSK 107
>gi|260904983|ref|ZP_05913305.1| ribonuclease P protein component [Brevibacterium linens BL2]
Length = 121
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++ F V K G + L + + + RVGF V+K G AV RNR++RRL
Sbjct: 7 RIRSGDDFRRVFKAGVRVRSAHLMAHSLIDTDDSHAARVGFIVSKAVGNAVVRNRVKRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E +R+ + L G +V+ A A F EL + + + ++ S
Sbjct: 67 REIMRVRLD-TLDSGALFVIRALPQAADAEFAELESEVTMLMDKAQKKLES 116
>gi|148266441|ref|YP_001233147.1| ribonuclease P [Geobacter uraniireducens Rf4]
gi|226736870|sp|A5G9V6|RNPA_GEOUR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146399941|gb|ABQ28574.1| ribonuclease P protein component [Geobacter uraniireducens Rf4]
Length = 113
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L KR +F F L + +S L ++G TV++K G +V RNR+
Sbjct: 7 PKYERLLKRSEFVQFTNARQRIHTAHFILLWTHTEDSTL--KIGITVSRKVGNSVIRNRV 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R ++E RL + ++ +IAK+ A + F+ L + R +
Sbjct: 65 KRLVREFYRLNKSRFVMAHYN--IIAKKGAEQLDFQRLSRELANVLERLHK 113
>gi|257070290|ref|YP_003156545.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
gi|256561108|gb|ACU86955.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
Length = 122
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V +G + + + PRVGF V+KK G AV RNR+ RRL+E VR
Sbjct: 13 EFRAVTRGGVRSARSHVVVHLALLTQGDEAPRVGFVVSKKIGNAVVRNRVTRRLREIVRP 72
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
L G V+ A PF EL + + +R R
Sbjct: 73 RLAA-LPPGAAIVVRALPGIDDQPFSELEHDVDSALAAAQRKLARRGKRVR 122
>gi|320354722|ref|YP_004196061.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
gi|320123224|gb|ADW18770.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
Length = 111
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +L+K +F V + G+ +G F++ V+ N R+G +V +K G AV RNR
Sbjct: 6 LPKAHLLRKTGEFQRVYRSGQRHRGNGFTVIVMPNTL--PWNRLGISVQRKTGNAVRRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R ++E RL G D V+ + D F L +
Sbjct: 64 VKRLVREVFRLN-RGDFPAHCDVVIAVRPDFSLDSFAALRADIARTL 109
>gi|313124786|ref|YP_004035045.1| ribonuclease p protein component [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281349|gb|ADQ62068.1| Ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685109|gb|EGD27240.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 121
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEQDFQTVFENGESVANRAFVIYVLHRK-QNKHFRVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYARDFDWEKTRENLLHAL 106
>gi|312897430|ref|ZP_07756854.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
gi|310621491|gb|EFQ05027.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
Length = 117
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L K R++ LV + G+ L ++ + + R GF KK GCAVERN
Sbjct: 4 LKKKDRLCKNREYQLVYRHGKSYVARSVVLYIMKRSPQQPI-RSGFVTGKKVGCAVERNY 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR +KE RL ++ G+D VLI + + + + ++ ++
Sbjct: 63 CRRLMKEVYRLHRSELI-SGYDLVLIGRSRMKYGTYADAEKTIMKLFKQA 111
>gi|317496614|ref|ZP_07954961.1| ribonuclease P [Gemella moribillum M424]
gi|316913279|gb|EFV34778.1| ribonuclease P [Gemella moribillum M424]
Length = 116
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F +++K + F + N R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRIKRSQDFDNIIRKKQSFANRQFVIYYQKNKLE--YMRLGISVSKKLGKAHERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E + + +D ++IA+ +PF E+ + ++++K
Sbjct: 59 IKRYIRETFKTRKNHI--KNYDIIIIARAGVKELPFLEVGSSIDHVLKKSK 107
>gi|217077889|ref|YP_002335607.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
gi|217037744|gb|ACJ76266.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
Length = 131
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LK R+ V K G+ + +F + N + F+V KK G AV+RN+++R +
Sbjct: 16 RLKLRKDILKVYKNGKSIQSSYFVILYCKNGLD--YSKFAFSVKKKFGKAVKRNKVKRWM 73
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK----RDALFIPFKELCNHFVERVRR 108
+E VR + + G+DY++I + +D I F + F+E R
Sbjct: 74 REIVRTN-KMNIPKGYDYLIIVRKMLSKDFEQIQFSQFKEAFLELFER 120
>gi|317126739|ref|YP_004100851.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
gi|315590827|gb|ADU50124.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
Length = 90
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+ + L PRVGF V+K G AV RN +RRL+ AV G + G D V+ A A
Sbjct: 5 RTDARAELPPRVGFVVSKAVGNAVTRNLTKRRLRAAVATQLSG-IPLGVDVVVRANPSAA 63
Query: 92 FIPFKELCNHFVERVRRNKRSYYSG 116
++EL + ++ R RS
Sbjct: 64 LASYQELADSIALQLDRVCRSVSKA 88
>gi|289612939|emb|CBI59987.1| unnamed protein product [Sordaria macrospora]
Length = 83
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 24 GPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
P F L V + L R+G TV+KK G AV RNRM+RR + +
Sbjct: 1 MPGFVLLVRSRRADELAESPDAMRIGITVSKKVGNAVVRNRMKRRFRALAAEMLPDLGIV 60
Query: 79 GHDYVLIAKRDALFIP 94
G D+VLI + + P
Sbjct: 61 GADHVLIGRASGIERP 76
>gi|218437891|ref|YP_002376220.1| ribonuclease P [Cyanothece sp. PCC 7424]
gi|226736857|sp|B7KHE3|RNPA_CYAP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218170619|gb|ACK69352.1| ribonuclease P protein component [Cyanothece sp. PCC 7424]
Length = 129
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL-----NNNNSNLLPRVGFTVTKKQ-GC 53
+ LK+R+ F V K G P + L N+ ++ G +V++K
Sbjct: 3 LPQEHRLKRRKDFQKVYKQGGRYTSPHLIIRTLFESCSENSLNSQPTCFGISVSQKVSKK 62
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++R +++A+R + +G V++ + ++ + + + + +
Sbjct: 63 AVIRNRIKRLIRQAIRELLPQ-ISNGWKVVIVIRPGSVECKYDRFLRELKQLLIKAE 118
>gi|158336232|ref|YP_001517406.1| ribonuclease P protein component [Acaryochloris marina MBIC11017]
gi|158306473|gb|ABW28090.1| ribonuclease P protein component [Acaryochloris marina MBIC11017]
Length = 106
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNN--NNSNLLPRVGFTVTKKQGC-AVE 56
+S LKK R+F++V +KG+ + + L + N+ R+GF++++K AV
Sbjct: 2 LSTSHRLKKNREFSVVYRKGKRQSTKYLVLRTYRSGANSQKKPIRIGFSISQKVSKRAVV 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
RNR++R+L+ A R L+ G D V++ + A+ +
Sbjct: 62 RNRIKRQLRAACRQLLPE-LQPGWDVVIVVRTAAVQCDY 99
>gi|154250756|ref|YP_001411580.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
gi|154154706|gb|ABS61923.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
Length = 134
Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MS I L+KRR F + R L+ + PRVGFTVT+K G +V RNR
Sbjct: 1 MSQIERLRKRRDFLAAARASKRAERGLVLQANERGDIAP-PRVGFTVTRKVGSSVVRNRA 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+RRL+ A K G+DYVLI ++ L
Sbjct: 60 KRRLRAAAAEILPLAAKDGYDYVLIGRQATLTR 92
>gi|85060409|ref|YP_456111.1| ribonuclease P [Sodalis glossinidius str. 'morsitans']
gi|123518606|sp|Q2NQ69|RNPA_SODGM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84780929|dbj|BAE75706.1| ribonuclease P protein [Sodalis glossinidius str. 'morsitans']
Length = 119
Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L N+ PRVG TV KK A ERNR++R +E+ RL D+V+IAK+
Sbjct: 35 ILGRLNTLGHPRVGLTVAKKHVKRAHERNRIKRLTRESFRLH--QHALPTMDFVVIAKKG 92
Query: 90 ALFIPFKELCNHFVERVRRNKRSYYS 115
+ L + RR+ R S
Sbjct: 93 VADLDNHTLTEALEKLWRRHCRQSQS 118
>gi|220919595|ref|YP_002494899.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957449|gb|ACL67833.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
Length = 116
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L++RR+F V++ R L VL + + PR+G TV+ K G AVERNR+
Sbjct: 3 LPKAARLRRRREFVQVQQHGRRLYSGDVL-VLALVSGSPRPRIGITVSSKVGNAVERNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+R ++EA R + D V+IA+ AL +
Sbjct: 62 KRWVREAWREIRPEL--PPVDLVVIARPAALQM 92
>gi|224367784|ref|YP_002601947.1| RnpA [Desulfobacterium autotrophicum HRM2]
gi|259494104|sp|C0QIZ3|RNPA_DESAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|223690500|gb|ACN13783.1| RnpA [Desulfobacterium autotrophicum HRM2]
Length = 117
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L KR F + + G ++ +F +L + R+G TV+K+ G AVERNR+
Sbjct: 7 PKTERLLKRADFLKLSRSGRTKQTRYFIAAML--GSETDTTRLGITVSKRVGNAVERNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R +++ RL + D +IA++ + +E+ + + ++ RS
Sbjct: 65 KRIVRDYYRLN-RDTISGNRDINIIARKYVASLNNREVRDELGKLFKKIVRS 115
>gi|320531081|ref|ZP_08032110.1| ribonuclease P protein component [Selenomonas artemidis F0399]
gi|320136663|gb|EFW28616.1| ribonuclease P protein component [Selenomonas artemidis F0399]
Length = 130
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S I+K+R F V KG G + L +L ++ + +VGF KK G A R+R
Sbjct: 8 LSRAQIIKRRSDFQNVYHKGTAFPGRYMILYIL--RDARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++EA RL + L+ +LI + ++ + RR K +G
Sbjct: 66 IKRLMREAYRL-MQHELRPDVGILLIGRAGLADHKMQDAAADLKKLARRAKILIPAGHAP 124
Query: 120 SRK 122
R+
Sbjct: 125 RRE 127
>gi|189426687|ref|YP_001953864.1| ribonuclease P protein component [Geobacter lovleyi SZ]
gi|189422946|gb|ACD97344.1| ribonuclease P protein component [Geobacter lovleyi SZ]
Length = 123
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L R ++ + + L V N PR+G T ++K G AV RNR++
Sbjct: 9 PKQYRLLSRSEYLRLSDSKTVVSGRSFLVVW-RENGYEYPRLGITASRKTGNAVVRNRLK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R ++E R L G D +I +R A L + ++
Sbjct: 68 RHIREFFRHHCS--LLPGVDLNVIVRRQAAENSAAALSSELQRAFQQIGSRT 117
>gi|311233303|gb|ADP86157.1| ribonuclease P protein component [Desulfovibrio vulgaris RCH1]
Length = 129
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R +F G F L V+ + R+G VT+K G AV+RNR++R L
Sbjct: 11 RLTRRPEFQACYGAGRRFFSKNFVLFVMERSADPEGWRLGLAVTRKTGTAVQRNRVKRVL 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKR 88
+E RL + VL D + + KR
Sbjct: 71 REFFRLH-QHVLPDDADIIAVPKR 93
>gi|160946602|ref|ZP_02093805.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
gi|158446986|gb|EDP23981.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
Length = 113
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ L+K R+F V ++G+ F++ + N + G +VTKK G A +RN
Sbjct: 1 MNKEIRLRKNREFQTVYRRGKNFWNRNFTIFIRPTNRK--KVKFGVSVTKKFGKANKRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RR+KE +RL + G++ V++ K++ L I + EL + +
Sbjct: 59 IKRRIKEIIRLNVCDLGL-GYEMVILPKKNTLEIDYIELERSLLRLI 104
>gi|329769248|ref|ZP_08260666.1| ribonuclease P [Gemella sanguinis M325]
gi|328839339|gb|EGF88920.1| ribonuclease P [Gemella sanguinis M325]
Length = 114
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F +++K + F + N R+G +V+KK G A ERNR
Sbjct: 1 MKKEYRVKKSQDFDNIIRKKQSFANRQFVIYYQENKLD--HMRLGISVSKKLGKAHERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E+ + + + +D ++I + A + F E + ++R+K
Sbjct: 59 LKRYVRESFKTRKDFL--KNYDIIIIVRPAAKGLSFLEFGSSIDHVLKRSK 107
>gi|78045102|ref|YP_358874.1| ribonuclease P protein component [Carboxydothermus hydrogenoformans
Z-2901]
gi|123577257|sp|Q3AG60|RNPA_CARHZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77997217|gb|ABB16116.1| ribonuclease P protein component [Carboxydothermus hydrogenoformans
Z-2901]
Length = 116
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ L K ++ + + G +F + L N + LP G +V+KK G AV RNR
Sbjct: 1 MNKCRFLSKNEEYRNIYQNGRSIASRYFVVYYLKNEDEKKLPSFGISVSKKIGKAVVRNR 60
Query: 60 MRRRLKEAV-RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RRRLKEA+ RLC E + G+DYV+I + F + + ++ KRS
Sbjct: 61 LRRRLKEALKRLCFEFL--PGYDYVIIPRLSFKNDEFSVILEQLLYIIKLMKRS 112
>gi|317154271|ref|YP_004122319.1| ribonuclease P protein component [Desulfovibrio aespoeensis Aspo-2]
gi|316944522|gb|ADU63573.1| ribonuclease P protein component [Desulfovibrio aespoeensis Aspo-2]
Length = 123
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 11 RQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
QF G R F L VL ++ R+G TV++K G AV RNR++R ++E R
Sbjct: 16 PQFTACYEHGRKRFTKRFILFVLRRDDGPSGLRLGLTVSRKMGNAVARNRIKRVVREYFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRD--ALFIPFKELCNHFVERVRRNK 110
L D V++ KR+ A + F + R K
Sbjct: 76 LHQYDFELP-LDIVVVPKRNLEASQLTLALATEEFSPLLSRAK 117
>gi|78486535|ref|YP_392460.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
gi|78364821|gb|ABB42786.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
Length = 162
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L + F V + E ++ V N+ S PR+G + KK +V RNR
Sbjct: 34 PKSLRLLSPQDFQFVFARAEKFSNRHWTFIVRPNDKS--YPRLGLAIAKKQLAKSVWRNR 91
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R +E R G+D V++ +R + + L F +R+ ++S
Sbjct: 92 VKRLARETFRQH--KQALSGYDIVVLGRRGMQDVDNETLIKSFEHLIRKIQKS 142
>gi|50365497|ref|YP_053922.1| ribonuclease P protein component [Mesoplasma florum L1]
gi|60390402|sp|Q6F0D5|RNPA_MESFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|50364053|gb|AAT76038.1| ribonuclease P protein component [Mesoplasma florum L1]
Length = 110
Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 12 QFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F ++ K E + F + N+ R G +V KK G AV RN+++R+++ ++
Sbjct: 12 EFQEIISKQEFHRNSAFVIYYSKNDKG--YFRYGISVGKKLGNAVTRNKIKRQIRMMIQD 69
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + + +D V+IA+ + F + + V R
Sbjct: 70 QIKILPEFSYDIVIIARNRMMQNSFDQNQKELNKLVVR 107
>gi|169832374|ref|YP_001718356.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
gi|169639218|gb|ACA60724.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
Length = 109
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I +KK R + V +G R L + N R G TV++K G AV RNR+R
Sbjct: 2 GIITIKKNRDYRQVFTRGRYRSDRLLVLYRMANGTGGR--RFGITVSRKLGGAVVRNRVR 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRLKE RL G+DYV++A+ A + L + ++ V
Sbjct: 60 RRLKEICRLN-PEAFPSGYDYVIVARPPAAECDHRVLTDSLLQLV 103
>gi|308273507|emb|CBX30109.1| Ribonuclease P protein component [uncultured Desulfobacterium sp.]
Length = 113
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ILK+R + L KKG K + ++ S R+G TVTKK G +V+RNR+
Sbjct: 9 LKTERILKRREFYELSKKGNRIKNKYVTVIYSP--GSTEKCRLGLTVTKKIGNSVQRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R ++E R+ + K+ D +I K +A + F+ + + ++
Sbjct: 67 KRYIREFFRVN-KSRFKNNWDINVIPKSEAANLTFENTHLYLLNIFKK 113
>gi|72163515|ref|YP_291172.1| ribonuclease P protein [Thermobifida fusca YX]
gi|123628489|sp|Q47K73|RNPA_THEFY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71917247|gb|AAZ57149.1| ribonuclease P protein [Thermobifida fusca YX]
Length = 147
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQGCAVERN 58
+++R F + R G L + + PRVGF+V+K G AV R
Sbjct: 7 RMRRRADFDTALRHGRRAGRNALSVALFVPQDTPDQPGGDAPPRVGFSVSKAVGKAVVRK 66
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++RRL+ +R G L G V+ AK A + + EL +R R +
Sbjct: 67 RVQRRLRHLMRERV-GSLPAGSLLVVRAKPQAALLDYSELAAQLDSALRAVTRPRGQSSH 125
Query: 119 FSRKS 123
+R S
Sbjct: 126 RTRAS 130
>gi|58584949|ref|YP_198522.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419265|gb|AAW71280.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 119
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 1 MSNICILKKRRQFALVKKGE------LRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQ 51
M N I K++ F+L K + +G + SL + + RVG ++KK
Sbjct: 1 MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKA 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G A +RN+++RRL+ R + G+ Y+++ ++ + +K L +++ K
Sbjct: 61 GKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQASYKNLRKDITICLKKIK 119
>gi|224541286|ref|ZP_03681825.1| hypothetical protein CATMIT_00446 [Catenibacterium mitsuokai DSM
15897]
gi|224525790|gb|EEF94895.1| hypothetical protein CATMIT_00446 [Catenibacterium mitsuokai DSM
15897]
Length = 112
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + KK + F L N N R+G +V KK G AV RN+
Sbjct: 1 MKKELRVKKSTEFETIIKKRKSVANREFVLYW--NPNDLEHMRIGLSVGKKIGNAVARNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R+++ V +DY+LI ++ F++ + K+
Sbjct: 59 TKRQVRMMVHELFTKE--DHNDYILIVRKPYSQNDFEQNKKSLQNLYLKMKKR 109
>gi|197124877|ref|YP_002136828.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
gi|196174726|gb|ACG75699.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
Length = 116
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L++RR+F V++ R L VL + + PR+G TV+ K G AVERNR+
Sbjct: 3 LPKAARLRRRREFVQVQQHGRRLYSGDVL-VLALVSGSPRPRIGITVSSKVGNAVERNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+R ++EA R D V+IA+ AL +
Sbjct: 62 KRWVREAWREIRPEY--PPVDLVVIARPAALRM 92
>gi|317182653|dbj|BAJ60437.1| ribonuclease P, protein component [Helicobacter pylori F57]
Length = 161
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDLLSCRLKDKKALCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|323700639|ref|ZP_08112551.1| ribonuclease P protein component [Desulfovibrio sp. ND132]
gi|323460571|gb|EGB16436.1| ribonuclease P protein component [Desulfovibrio desulfuricans
ND132]
Length = 123
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L + +F +G+ F L +L ++ R+G TV+KK G AV RNR++R +
Sbjct: 11 RLLRSPEFKACYEQGKKHFTRSFILFILKRSSPGPGIRLGLTVSKKMGHAVARNRIKRVV 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRD 89
+E RL D V++ KR+
Sbjct: 71 REYFRLHQFDFDLP-LDVVVVPKRN 94
>gi|15646057|ref|NP_208239.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
gi|2500593|sp|P55997|RNPA_HELPY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|2314624|gb|AAD08489.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
Length = 161
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSQEPPKEKAGFKDPLFCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|84497196|ref|ZP_00996018.1| ribonuclease P protein [Janibacter sp. HTCC2649]
gi|84382084|gb|EAP97966.1| ribonuclease P protein [Janibacter sp. HTCC2649]
Length = 90
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+ PRVGF V+K G AV RNR +RRL+ A+ G + G D V+ A+ A F
Sbjct: 11 AGFPPRVGFVVSKAVGNAVVRNRTKRRLRAAIATELTG-IPTGLDVVVRAQPAAASATFA 69
Query: 97 ELCNHFVERVRRNKRS 112
EL + + R
Sbjct: 70 ELSESLKPLLHKVIRR 85
>gi|303228592|ref|ZP_07315419.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
gi|303230630|ref|ZP_07317380.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302514685|gb|EFL56677.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302516771|gb|EFL58686.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
Length = 115
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + ++ LV K G+ G L + + R+GF KK GCAVERNR
Sbjct: 5 LDKTRRIINNNEYRLVYKHGKYEVGRLCVLYRMP--VAKQKTRIGFVTGKKVGCAVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + ++ G+ V++ + ++ + +R++K
Sbjct: 63 ARRLMKEVYRLN-QHQIREGYHIVIVGRGPLKDATYERAEKEILYLLRKSK 112
>gi|317179624|dbj|BAJ57412.1| ribonuclease P, protein component [Helicobacter pylori F30]
Length = 161
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|217033921|ref|ZP_03439345.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
gi|216943684|gb|EEC23129.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
Length = 161
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|42519905|ref|NP_965835.1| ribonuclease P [Lactobacillus johnsonii NCC 533]
gi|67461478|sp|Q74H92|RNPA_LACJO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|41584195|gb|AAS09801.1| ribonuclease P protein component [Lactobacillus johnsonii NCC 533]
gi|329668162|gb|AEB94110.1| ribonuclease P protein component [Lactobacillus johnsonii DPC 6026]
Length = 122
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + ++ D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATL-TELKPEIRPDLDFLVIARPYARDFDMGRTKKNLIHVLRLAK 110
>gi|301064568|ref|ZP_07204964.1| ribonuclease P protein component [delta proteobacterium NaphS2]
gi|300441316|gb|EFK05685.1| ribonuclease P protein component [delta proteobacterium NaphS2]
Length = 111
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R +F V + G+ R F ++ N + R+G T ++K G AV RNR +R +
Sbjct: 12 RLLRRTEFVNVNRSGKHRHMRHFI--AVSGKNELGITRLGVTASRKVGNAVRRNRAKRLI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+E RL + G D V+IAK+ A ++ + E + V
Sbjct: 70 REFYRLH-KACFPKGVDIVVIAKKGAGYLNYHEAEKELEKIVA 111
>gi|257437738|ref|ZP_05613493.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
gi|257200045|gb|EEU98329.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
Length = 152
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL RVG T TKK G AV+RNR RR +K
Sbjct: 26 IRRNSEFGRVYARGKSYVNPALVLYVLKTR--GKKTRVGLTATKKIGHAVQRNRARRVMK 83
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A+ + + G+D V +A+ + +L + + + ++
Sbjct: 84 AAIDEHLDQNI-GGYDLVFVARGMTPRLKSWQLSEVVARLFAQAGLPDKAKQPGAKPP 140
>gi|317178152|dbj|BAJ55941.1| ribonuclease P, protein component [Helicobacter pylori F16]
Length = 161
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|260771042|ref|ZP_05879970.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|260613931|gb|EEX39122.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|315178631|gb|ADT85545.1| ribonuclease P [Vibrio furnissii NCTC 11218]
Length = 107
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ +NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 12 QQAHRAGSPHFTIIARDNNLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRLNQHKL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
DYV+IAK+ A + +E+ F + R R
Sbjct: 70 AHK--DYVVIAKKSAQDLSNEEMFTLFDKLWHRLSRPSR 106
>gi|313894728|ref|ZP_07828289.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976637|gb|EFR42091.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
Length = 130
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S ++K+R F V KG G + L +L ++ + +VGF KK G A R+R
Sbjct: 8 LSRAQMIKRRSDFQNVYHKGTAFPGRYIILYIL--RDARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R ++EA RL + L+ +LI + ++ + RR K +G
Sbjct: 66 TKRLMREAYRL-MQYELRPDVGILLIGRAGLADHKMQDAAADLKKLARRAKILIPAGHAP 124
Query: 120 SRK 122
R+
Sbjct: 125 RRE 127
>gi|114568079|ref|YP_755233.1| RNase P protein component [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317080|sp|Q0ATU2|RNPA_SYNWW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114339014|gb|ABI69862.1| ribonuclease P protein component [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 119
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ R++ V KG+ G F + + N N R GF KK G AV RNR
Sbjct: 2 LDKKARIRTSREYRNVFEKGKRLSGRFLIIYYVENALDN--NRFGFITNKKIGMAVIRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R+L+ VR +G +K+ HD VL+A+ F+ + ++ +++
Sbjct: 60 IKRQLRAIVRE-YQGQVKNKHDIVLVARAGIGKSSFEGMEKDYIAIMKKA 108
>gi|332702556|ref|ZP_08422644.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
gi|332552705|gb|EGJ49749.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
Length = 137
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 2 SNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L R +F G R F VL + + + R+G VT+K G AV RNR+
Sbjct: 7 PKRNRLLSRPEFLACYDGGRRLNSRHFIAYVLPHEHGSW--RLGLAVTRKVGSAVRRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERVRRN 109
+R L+E RL + + D V++ KR DA + +++ + R
Sbjct: 65 KRVLREYFRLHQHELSEL-MDIVVVPKRHVDASSLDLRQVEAELTPMLVRA 114
>gi|15612406|ref|NP_224059.1| putative ribonuclease P protein component [Helicobacter pylori J99]
gi|9789807|sp|Q9ZJH0|RNPA_HELPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4155953|gb|AAD06918.1| putative RIBONUCLEASE P PROTEIN COMPONENT [Helicobacter pylori J99]
Length = 161
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V +KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V A L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGFALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|315585835|gb|ADU40216.1| ribonuclease P [Helicobacter pylori 35A]
Length = 161
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|308183544|ref|YP_003927671.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
gi|308065729|gb|ADO07621.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
Length = 161
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKESPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCCHLDFWALEKHFLEML 136
>gi|328477492|gb|EGF47593.1| ribonuclease P [Lactobacillus rhamnosus MTCC 5462]
Length = 103
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVL 76
G+ F + + + RVG +V KK G AV RN+++R +++++ L + +
Sbjct: 4 HGDSVANRNFVIYHMKRDQ--PHFRVGISVGKKVGHTAVMRNQIKRYIRQSL-LELKPEI 60
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
D+++IA++ A + E + + +R
Sbjct: 61 DPQTDFLVIARKSANQLDMAETKKNLIHVMR 91
>gi|332674214|gb|AEE71031.1| ribonuclease P protein component [Helicobacter pylori 83]
Length = 161
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|317181131|dbj|BAJ58917.1| ribonuclease P, protein component [Helicobacter pylori F32]
Length = 161
Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|227889158|ref|ZP_04006963.1| ribonuclease P [Lactobacillus johnsonii ATCC 33200]
gi|227850387|gb|EEJ60473.1| ribonuclease P [Lactobacillus johnsonii ATCC 33200]
Length = 122
Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + ++ D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATL-TELKPEIRPDLDFLVIARPYARDFDMGRTKKNLIHVLRLAK 110
>gi|257127033|ref|YP_003165147.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
gi|257050972|gb|ACV40156.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
Length = 109
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 3 NICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+I +KK + F + K + + + + N N+ R GF +KK G AV+RNR++
Sbjct: 2 SINKIKKSKDFSLIYNKSQKMHTKYAIIFIKENMNNEQ--RFGFVASKKTGNAVQRNRIK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIA----KRDALFIPFKELCNHFVERVRR 108
R KE V+ + + DY+ + K + +K++ ++ +++
Sbjct: 60 RLFKEFVKTH-KNKFRENTDYIFVGKSVLKEKIKNLKYKDIEKDIIKVIKQ 109
>gi|317013214|gb|ADU83822.1| ribonuclease P protein component [Helicobacter pylori Lithuania75]
Length = 161
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
Query: 107 RRNK 110
K
Sbjct: 137 ASIK 140
>gi|239616664|ref|YP_002939986.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
gi|239505495|gb|ACR78982.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
Length = 134
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+K+ F V K F + + N R+G +V KK G A +RNR+RR +K
Sbjct: 13 RLRKKADFDRVFKQGNVVQDNFFVVLYVRN-GLPFSRIGVSVKKKFGKAHDRNRLRRIVK 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALF------IPFKELCNHFVERVRRNKRSYYSGKNF 119
E R L G+D ++IA+++ + L +H + + + KN
Sbjct: 72 EIFRKNKSAFL-PGYDILVIARKELSDSFKSGKADYHILSDHLLGLLSGIAEQEKNEKNS 130
Query: 120 S 120
S
Sbjct: 131 S 131
>gi|262038120|ref|ZP_06011521.1| ribonuclease P protein component [Leptotrichia goodfellowii F0264]
gi|261747844|gb|EEY35282.1| ribonuclease P protein component [Leptotrichia goodfellowii F0264]
Length = 108
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I +KK + FA + + + + + NN R GF +KK G AV+RNR++
Sbjct: 2 QINKIKKNKDFAFIYNNSKKVYTRYAIIFIKENNKKEQ--RFGFVASKKTGKAVQRNRIK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIA----KRDALFIPFKELCNHFVERVR 107
R +E V+L + K DY+ + K + + +K++ ++ V+
Sbjct: 60 RLFREFVKLN-KSKFKESSDYIFVGKSNLKENIKSLKYKDIEKDMLKAVK 108
>gi|86160775|ref|YP_467560.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777286|gb|ABC84123.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
Length = 116
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L++RR+F V++ R L VL + + PR+G TV+ K G AVERNR+
Sbjct: 3 LPKAARLRRRREFLQVQQHGRRLYSGDVL-VLALVSGSPRPRIGITVSSKVGNAVERNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+R ++EA R D V+IA+ AL +
Sbjct: 62 KRWVREAWREIRPEF--PPVDLVVIARPAALRM 92
>gi|307133249|ref|YP_003885265.1| protein C5 component of RNase P [Dickeya dadantii 3937]
gi|306530778|gb|ADN00709.1| protein C5 component of RNase P [Dickeya dadantii 3937]
Length = 119
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L F+ V ++ + P ++ N PR+G TV KK A ERNR
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGTPQITILGRPNTLG--HPRIGLTVAKKHVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +E+ RL + D+V+IAK+ + + L + RR+ R ++
Sbjct: 65 IKRLTRESFRLHQHEL--PAMDFVVIAKKGVSELDNRTLTEALEKLWRRHCRLAHA 118
>gi|261840123|gb|ACX99888.1| ribonuclease P [Helicobacter pylori 52]
Length = 161
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|261838723|gb|ACX98489.1| ribonuclease P protein component [Helicobacter pylori 51]
Length = 161
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|284052521|ref|ZP_06382731.1| ribonuclease P [Arthrospira platensis str. Paraca]
Length = 129
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVTKKQGC 53
+ + L+ + F V +G RK +L L + + R G ++++K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEIDAGDPPSRFGISISQKVSK 61
Query: 54 -AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRELLPK-ISPGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|332709874|ref|ZP_08429830.1| ribonuclease P [Lyngbya majuscula 3L]
gi|332351245|gb|EGJ30829.1| ribonuclease P [Lyngbya majuscula 3L]
Length = 135
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNN-----------------NNSNLLPR 42
+ LK R F V + G R G + +L L ++ R
Sbjct: 3 LPQANRLKHWRDFKTVYRWGIRRSGRYLTLRGLQQSTIAPIAKETIAPEKSLPDNPPPSR 62
Query: 43 VGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G ++++K AV RNR++R+++ A+R L G V I K +A + +L
Sbjct: 63 LGISISQKVSKKAVVRNRIKRQIRSALRQLLPR-LSPGWKLVFIVKPEARECEYAQLLRE 121
Query: 102 FVERVRRNK 110
+ + + +
Sbjct: 122 LEKLLVKAE 130
>gi|296110739|ref|YP_003621120.1| ribonuclease P [Leuconostoc kimchii IMSNU 11154]
gi|295832270|gb|ADG40151.1| ribonuclease P [Leuconostoc kimchii IMSNU 11154]
Length = 115
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K +F + L+ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPTEFQIVFNKHRSVANKYFIIYQLDKPEQKHF-RLGISVSKKIGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++ L + + D ++IA+ K + + ++
Sbjct: 60 VKRRIRQS-MLELKPQIPQEIDVLVIARPAVAKQSQKFIKEQMIHVLK 106
>gi|116491816|ref|YP_811360.1| RNase P protein component [Oenococcus oeni PSU-1]
gi|118587492|ref|ZP_01544917.1| ribonuclease P, protein component [Oenococcus oeni ATCC BAA-1163]
gi|290891477|ref|ZP_06554536.1| hypothetical protein AWRIB429_1926 [Oenococcus oeni AWRIB429]
gi|122276002|sp|Q04CX7|RNPA_OENOB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116092541|gb|ABJ57695.1| RNase P protein component [Oenococcus oeni PSU-1]
gi|118432142|gb|EAV38883.1| ribonuclease P, protein component [Oenococcus oeni ATCC BAA-1163]
gi|290478919|gb|EFD87584.1| hypothetical protein AWRIB429_1926 [Oenococcus oeni AWRIB429]
Length = 122
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLE--VLNNNNSNLLPRVGFTVTKKQGCAVERN 58
+KK F V K + +F + R+G +V+KK G A ER
Sbjct: 4 KKPFRIKKTSDFQRVFAKHKSFANRYFVVYSDTQPKEVDVSHWRIGLSVSKKIGKAHERV 63
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+ E+ + + D V++A+ K + + + +
Sbjct: 64 WVKRRISESF-NNISLFIPNNLDIVIVARPLVKGQKQKIIQDQLMHVLD 111
>gi|319789451|ref|YP_004151084.1| ribonuclease P protein component [Thermovibrio ammonificans HB-1]
gi|317113953|gb|ADU96443.1| ribonuclease P protein component [Thermovibrio ammonificans HB-1]
Length = 122
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
L+KRR F V G+ G + L N+ PR GF +KK AVERNR +R
Sbjct: 14 RLRKRRDFERVFAHGKSLGGSTVAFYFLENDVGR--PRAGFIASKKVSRKAVERNRAKRL 71
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++E RL + D V IA++ + F+++ F+ ++
Sbjct: 72 MREVFRLNKHRLGP--FDIVFIARKGIVGKRFQDVEADFLRLAKKA 115
>gi|170018057|ref|YP_001728976.1| ribonuclease P protein component [Leuconostoc citreum KM20]
gi|238688942|sp|B1MWS3|RNPA_LEUCK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169804914|gb|ACA83532.1| Ribonuclease P protein component [Leuconostoc citreum KM20]
Length = 116
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F +V K + +F + ++ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPADFQIVFNKHQSVANKYFIVYHIDKPEQKHF-RLGLSVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ L + L H D ++IA+ K + + ++
Sbjct: 60 VKRRIRQSI-LELKSDLPHDIDLLVIARPAVAKQSQKFIKEQIIHVLK 106
>gi|218291092|ref|ZP_03495115.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
LAA1]
gi|218238977|gb|EED06184.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
LAA1]
Length = 120
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK R F V +KG+ L +N RVGF++++K G AV RNR
Sbjct: 1 MQSQHRLKDSRDFRRVFRKGKSFASGRLVLYYCDNR--EARVRVGFSISRKVGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK-RSYYSGKN 118
++R L+ + + + D V++ + +A F +L +++ K +G
Sbjct: 59 LKRLLRAIFQRHLDELRDRPVDVVVVCRANAADADFHDLEREVERLLKKAKLLPQQAGDE 118
Query: 119 FS 120
Sbjct: 119 RP 120
>gi|323141439|ref|ZP_08076329.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
gi|322414095|gb|EFY04924.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
Length = 125
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + LK ++ F +V KG +L + ++G V KK GCAV RNR
Sbjct: 15 LKKLNRLKSKKSFQIVYVKGRTVVDAMSVFYILP--DQGEDIKIGLAVGKKLGCAVVRNR 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E R+ + LK G+ V +A++ +K F+ +R
Sbjct: 73 VKRLMREVFRMH-KAELKKGYHIVWVARKKLTKADYKTFERVFLRLAKRAA 122
>gi|295103713|emb|CBL01257.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii SL3/3]
Length = 135
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL N RVG T TKK G AV+RNR RR +K
Sbjct: 6 IRRNSEFGRVYARGKSYVNPALVLYVLKTRGRNT--RVGLTATKKIGHAVQRNRARRVMK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A+ + + G+D + +A+ + +L + + + + + ++
Sbjct: 64 AAIDEHLDHNI-GGYDLIFVARGMTPKLKSWQLSSVVAKLFAQAGLPDKAKRPDAKPP 120
>gi|238926595|ref|ZP_04658355.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
gi|238885541|gb|EEQ49179.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
Length = 135
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+R F V KG G L VL + + +VGF KK GCA RNR
Sbjct: 15 LPRSKMIKRRSDFQCVYQKGHSAAGRHMILYVL--RDPRVAGKVGFAAGKKLGCAAVRNR 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L+EA R + L+ +LI + ++ RR
Sbjct: 73 TKRLLREAYR-GLQHELRSDIGILLIGRAGLADGKMQDAAEDLRRLARRA 121
>gi|217033103|ref|ZP_03438567.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298735586|ref|YP_003728109.1| ribonuclease P protein component [Helicobacter pylori B8]
gi|216945176|gb|EEC23867.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298354773|emb|CBI65645.1| ribonuclease P protein component [Helicobacter pylori B8]
Length = 161
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLA--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|22298144|ref|NP_681391.1| putativ eribonuclease P [Thermosynechococcus elongatus BP-1]
gi|22294323|dbj|BAC08153.1| tll0601 [Thermosynechococcus elongatus BP-1]
Length = 245
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
+ L+ R F V + + ++ L +S PR+ V+KK AV+RNR
Sbjct: 2 LPRQHRLRDRHDFDRVYQHKTAHHGKLAVLWLAPQSSREAPRLAIVVSKKVSKRAVDRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R+ + +R + G D +++ ++ AL + ++ + + +
Sbjct: 62 LKRQWRRVIRPLLPQ-MAAGWDMIVVVRQAALHVSDEDCRTELTQLMAKA 110
>gi|188528218|ref|YP_001910905.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|238691954|sp|B2UVJ3|RNPA_HELPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188144458|gb|ACD48875.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|308062711|gb|ADO04599.1| ribonuclease P protein component [Helicobacter pylori Cuz20]
Length = 161
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|254779959|ref|YP_003058066.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
gi|254001872|emb|CAX30122.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
Length = 161
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPREKEGFKDPLFCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|78357439|ref|YP_388888.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|123741238|sp|Q30YQ3|RNPA_DESDG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78219844|gb|ABB39193.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 125
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L +R + G F + L + + R G V++K G AV RNR
Sbjct: 2 LARPSRLTRRPDYVACYNTGRRYFSKHFIVFALEREGAAPVWRYGLAVSRKVGDAVRRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+R L+E RL + + G D V++ KR
Sbjct: 62 TKRVLREFFRLYQDD-MPGGMDLVVVPKR 89
>gi|207092097|ref|ZP_03239884.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 161
Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ A L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLTSKHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|170749904|ref|YP_001756164.1| ribonuclease P protein component [Methylobacterium radiotolerans
JCM 2831]
gi|170656426|gb|ACB25481.1| ribonuclease P protein component [Methylobacterium radiotolerans
JCM 2831]
Length = 206
Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV-LNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ I LKKR F +G + + L N ++ R+GFT+TK+ G A ERNR
Sbjct: 1 MATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNR 60
Query: 60 MRRRLKE---AVRLCAEGVLKH-GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RRRL+ V G L D VLIA+R AL F+ L + R
Sbjct: 61 IRRRLRAALSVVASDLPGELAGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRP 117
>gi|210135614|ref|YP_002302053.1| ribonuclease P protein component [Helicobacter pylori P12]
gi|226741390|sp|B6JNU5|RNPA_HELP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|210133582|gb|ACJ08573.1| ribonuclease P protein component [Helicobacter pylori P12]
Length = 161
Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDKVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|297380699|gb|ADI35586.1| ribonuclease P protein component [Helicobacter pylori v225d]
gi|308064205|gb|ADO06092.1| ribonuclease P protein component [Helicobacter pylori Sat464]
Length = 161
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|317010180|gb|ADU80760.1| ribonuclease P protein component [Helicobacter pylori India7]
Length = 161
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDVSKEPPKEKEGFKDPLSCRLKDKKALYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|295425823|ref|ZP_06818504.1| ribonuclease P protein component [Lactobacillus amylolyticus DSM
11664]
gi|295064516|gb|EFG55443.1| ribonuclease P protein component [Lactobacillus amylolyticus DSM
11664]
Length = 129
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V K GE F + + N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQHVFKAGESVANRAFVIYKIEKT-ENKHFRVGISVGKKVGHTAVIRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++I + A E+ + + +
Sbjct: 60 RLKRYIRAVI-TEYKTEIDPHIDFLVITRPYARNFDMTEVRKNLIHAL 106
>gi|268320271|ref|YP_003293927.1| ribonuclease P protein component [Lactobacillus johnsonii FI9785]
gi|262398646|emb|CAX67660.1| ribonuclease P protein component [Lactobacillus johnsonii FI9785]
Length = 122
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + ++ D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATL-TELKPEIRSDLDFLVIARPYARDFDMGRTKKNLIHVLRLAK 110
>gi|317014861|gb|ADU82297.1| ribonuclease P protein component [Helicobacter pylori Gambia94/24]
Length = 161
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V +KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V A L G V + K D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGLTLVFVPKSDCYHLDFWALEKHFLEML 136
>gi|326692345|ref|ZP_08229350.1| ribonuclease P [Leuconostoc argentinum KCTC 3773]
Length = 116
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K + +F L L R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPAEFQIVFNKHQSVANKYFILYQLQKPEQKHF-RLGLSVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V L + L D ++IA+ K + ++
Sbjct: 60 VKRRIRQSV-LELKPQLPQELDLLIIARPAVAKKSQKFIKEQITHVLK 106
>gi|6094113|sp|O86449|RNPA_PSEAO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3341478|emb|CAA04148.1| RNase P protein [Pseudanabaena sp. PCC 6903]
Length = 116
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ N L++R FA V KG+ +G + SL++L +++ R+G V+KK AV RN
Sbjct: 2 LPNQNRLRRREDFAKVYAKGDRYRGTYLSLKILF-DSNTTYTRIGIVVSKKVSKLAVTRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R +R+L+ R LK G V+ A ++EL + + + K
Sbjct: 61 RFKRQLRAIFRQLLSQ-LKDGLQIVVTVTTVASKPNYQELGDDLKNILAKAK 111
>gi|209527901|ref|ZP_03276389.1| ribonuclease P protein component [Arthrospira maxima CS-328]
gi|209491656|gb|EDZ92023.1| ribonuclease P protein component [Arthrospira maxima CS-328]
Length = 129
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVTKKQGC 53
+ + L+ + F V +G RK +L L + R G ++++K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEMDAGVPASRFGISISQKVSK 61
Query: 54 -AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRQLLP-TISPGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|308185211|ref|YP_003929344.1| ribonuclease P protein component [Helicobacter pylori SJM180]
gi|308061131|gb|ADO03027.1| ribonuclease P protein component [Helicobacter pylori SJM180]
Length = 161
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|163851775|ref|YP_001639818.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
gi|163663380|gb|ABY30747.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
Length = 165
Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTDRMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSLTRPA 120
Query: 114 YSGKNFSRKS 123
+ S +
Sbjct: 121 TPRSSDSARP 130
>gi|187735750|ref|YP_001877862.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
gi|187425802|gb|ACD05081.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
Length = 115
Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+ + QFA V+ G G L + + G TKK GCAV RN++RRR++
Sbjct: 1 MTRAFQFARVRNEGPSVAGRLIVLSAAPLEHPEEPSKFGIICTKKIGCAVVRNKLRRRVR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E +R ++G V + + A+ + +L + + R+ K
Sbjct: 61 EILRAHGAPF-ENGVHLVCVLRWRAVEASYADLERDWRKAARKLK 104
>gi|300174208|ref|YP_003773374.1| ribonuclease P protein component [Leuconostoc gasicomitatum LMG
18811]
gi|299888587|emb|CBL92555.1| Ribonuclease P protein component [Leuconostoc gasicomitatum LMG
18811]
Length = 116
Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F LV K +F + L ++ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPTDFQLVFNKHRSVANKYFIVYQLGKSDQKHF-RLGISVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ L + L + D ++IA+ K + V ++
Sbjct: 60 VKRRIRQSI-LELKPQLPNELDILVIARPAVAKQSQKFIKEQIVHVLK 106
>gi|307638099|gb|ADN80549.1| Ribonuclease P protein component [Helicobacter pylori 908]
gi|325996700|gb|ADZ52105.1| Ribonuclease P protein component [Helicobacter pylori 2018]
gi|325998292|gb|ADZ50500.1| putative ribonuclease P protein component [Helicobacter pylori
2017]
Length = 161
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V +KG + PFFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ V A L G V + K D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGLALVFVPKSDCYHLDFWALEKHFLEML 136
>gi|240138940|ref|YP_002963415.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
gi|240008912|gb|ACS40138.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
Length = 165
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTDRMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRKS 123
+ S +
Sbjct: 121 TPRSSDSARP 130
>gi|260893981|ref|YP_003240078.1| ribonuclease P protein component [Ammonifex degensii KC4]
gi|260866122|gb|ACX53228.1| ribonuclease P protein component [Ammonifex degensii KC4]
Length = 110
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
N R+GF V+KK AV++NR+RR L+E RL + + G DYVL+ + A
Sbjct: 33 RPNQLDFYRLGFAVSKKVKTAVKKNRVRRLLREVCRLN-PELFRPGFDYVLLGREGAEES 91
Query: 94 PFKELCNHFVERVRRNKR 111
+ E+ E +RR
Sbjct: 92 SYWEIEEDVREALRRGGP 109
>gi|109946794|ref|YP_664022.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
gi|123173592|sp|Q17ZA3|RNPA_HELAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|109714015|emb|CAJ99023.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
Length = 153
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR---------------VGFTVTKK 50
LK + +F V +G + FFSL VL+ + + +G +V+KK
Sbjct: 19 LKNKSEFDRVYQRGFKKHNSFFSLFVLDASKEPSHFKNPFFCRLKDTEKSCLLGLSVSKK 78
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
G AV+RN ++RRL+ V L G V + K+D + F L HF+E +
Sbjct: 79 VGNAVKRNLIKRRLRSLV--LKHASLCQGFALVFVPKKDCERLDFLTLEKHFLEML 132
>gi|304437934|ref|ZP_07397880.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369074|gb|EFM22753.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 130
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+R F V KG G L VL + + +VGF KK GCA R+R
Sbjct: 8 LPRSRMIKRRSDFQCVYQKGRSVAGRSMILYVL--RDPRVAGKVGFAAGKKLGCAAVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L+EA R C + L+ +LI + ++ +RR
Sbjct: 66 TKRLLREAYR-CLQHELRGDVGILLIGRAGLADGKMQDAAEDLRRLIRRA 114
>gi|90422338|ref|YP_530708.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
gi|90104352|gb|ABD86389.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
Length = 95
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
P F L+ + ++ + RVGFTVTKK G A ERNR+RRRL+E V+ ++ D
Sbjct: 1 MSRPAFVLQGRDRDDDGPI-RVGFTVTKKIGTATERNRIRRRLREVVKRVDGAAMRPHSD 59
Query: 82 YVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
YVL+ +R AL F + + + R R S
Sbjct: 60 YVLVGRRAALDRGFSVMIDDLHVALDRIGRGRQS 93
>gi|171911026|ref|ZP_02926496.1| ribonuclease P protein component [Verrucomicrobium spinosum DSM
4136]
Length = 130
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+ +F V+ +G G + L VL + R G ++K G AV+RN +RRRL
Sbjct: 8 RLRSASEFGRVRSEGTTYPGRYVVLGVL-RADEEAPWRSGLITSRKVGGAVQRNLVRRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E +R L G V+IA+ A F EL F + +R
Sbjct: 67 REILRATP---LAPGVWLVVIARWKAAGATFDELRTDFQKVAKRA 108
>gi|300087855|ref|YP_003758377.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527588|gb|ADJ26056.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 95
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
L + N + L R GF V++K G AV RN +RRRLKE +R L G+D V IA++
Sbjct: 12 LVMKKVFNGSSLNRYGFVVSRKVGGAVVRNMVRRRLKEIIR---GQNLMPGYDIVFIARQ 68
Query: 89 DALFIPFKELCNHFVERVRRN 109
+ + +L +R
Sbjct: 69 TSARATYAQLEKSSRGLAKRA 89
>gi|158520117|ref|YP_001527987.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
gi|226736860|sp|A8ZRZ3|RNPA_DESOH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158508943|gb|ABW65910.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
Length = 121
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F + L + N + R+G TV+KK G A RNR++R ++
Sbjct: 11 RLLKRYEFIEIFTSGKTVHSSCFLAGIKKNRKERI-RLGITVSKKVGKAARRNRIKRHVR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E RL + L + D +IAK+ A+ EL E ++ R + S +
Sbjct: 70 EFFRLHRDN-LSNCWDINVIAKKKAVNASPAELERSLAELFHKSSREFPSDRQ 121
>gi|317484432|ref|ZP_07943346.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
gi|316924320|gb|EFV45492.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
Length = 103
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 12 QF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F +G F + V + + RVG VTKK G AV RNR++R L+E RL
Sbjct: 1 DFTLCYDEGRRFFSKHFVVFVRFRASGDPW-RVGMAVTKKIGTAVMRNRVKRVLRECFRL 59
Query: 71 CAEGVLKHGHDYVLIAKR 88
+ +L D V++ KR
Sbjct: 60 H-QALLPPAVDLVIVPKR 76
>gi|218530583|ref|YP_002421399.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
gi|218522886|gb|ACK83471.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
Length = 165
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRKS 123
+ S +
Sbjct: 121 TPRSSDSARP 130
>gi|296444657|ref|ZP_06886621.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
gi|296257925|gb|EFH04988.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
Length = 139
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 16 VKKGELRK--GPFFSLEVLNN-NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
K L++ G F L+ + PR G TVTKK AV RNR+RRRL+EA+RLC
Sbjct: 23 AAKSGLQRSGGAAFKLQAAAREGDDEAPPRFGLTVTKKVAGAVGRNRIRRRLREALRLCG 82
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
G+DYV IA+ AL +PF EL E + + R SG
Sbjct: 83 AAGALPGYDYVFIARPGALTMPFAELEAQMAEALAKL-RPRASGPQ 127
>gi|16330834|ref|NP_441562.1| ribonuclease P [Synechocystis sp. PCC 6803]
gi|2500595|sp|Q55005|RNPA_SYNY3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1491766|emb|CAA57516.1| rnpA [Synechocystis sp. PCC 6803]
gi|1653327|dbj|BAA18242.1| protein subunit of ribonuclease P [Synechocystis sp. PCC 6803]
Length = 124
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERN 58
+ LK + F V + G+ + + VL + ++ R G TV++K A RN
Sbjct: 3 LPKTLRLKHWQDFQTVYQQGKRHRHSNLLMRVLGDRQAD-HSRFGITVSQKVSKKATVRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R++R+++ + + +K G D V+I + ++ + +
Sbjct: 62 RLKRQIRAVI-NHFQPQIKPGFDVVIIVLPQGIGCNYERFLRELEQLFSQA 111
>gi|291571999|dbj|BAI94271.1| ribonuclease P protein component [Arthrospira platensis NIES-39]
Length = 129
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVTKKQGC 53
+ + L+ + F V +G RK +L L + + R G ++++K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEIDAGDPPSRFGISISQKVSK 61
Query: 54 -AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRELLSK-ISPGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|293393719|ref|ZP_06638027.1| ribonuclease P protein component [Serratia odorifera DSM 4582]
gi|291423763|gb|EFE96984.1| ribonuclease P protein component [Serratia odorifera DSM 4582]
Length = 108
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 12 QQPQRAGTPQITI--LGRLNQLGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLHQHQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
D+V++AK+ + + L + RR+ R +
Sbjct: 70 --PAMDFVVVAKKGIADLDNRALTEALEKLWRRHCRQAPA 107
>gi|298253032|ref|ZP_06976824.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
gi|297532427|gb|EFH71313.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
Length = 135
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
FS L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL
Sbjct: 33 AFSDTFLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLRVIAK-NYESLLPAGCDVVLR 91
Query: 86 AKRDALFIPFKELCNHFVERVRR 108
AK A F L + +
Sbjct: 92 AKPSAAQSSFDSLQCQIQKLFGK 114
>gi|223983637|ref|ZP_03633815.1| hypothetical protein HOLDEFILI_01096 [Holdemania filiformis DSM
12042]
gi|223964404|gb|EEF68738.1| hypothetical protein HOLDEFILI_01096 [Holdemania filiformis DSM
12042]
Length = 112
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + + + P F L V R+G +V KK G AV RN+
Sbjct: 1 MKKKYRVKKAGEFQTIIEHRKFVSCPSFVLYVKARK--EEHSRIGISVGKKLGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+++ + + D +LI ++ L + + +++ K Y+
Sbjct: 59 TKRQVRMMFQEIYDFD--ENFDGILIVRKKFLEQSYSDNKKDLESLIKKVKIKKYA 112
>gi|291541860|emb|CBL14970.1| ribonuclease P protein component, eubacterial [Ruminococcus bromii
L2-63]
Length = 113
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LK R F+ L ++G+ GP VL N + NL R G T KK G AV R R
Sbjct: 1 MSEYITLKDNRDFSGLYRRGKSFVGPVLVTYVLKNKSDNL--RFGITTGKKIGKAVRRTR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP----FKELCNHFVER 105
RR ++EA +K G+D+V +A+ ++ +KE+
Sbjct: 59 SRRVIREAYYKLYPD-IKKGYDFVFVARGKTPYVKSTVVYKEMKKQLSLA 107
>gi|330718060|ref|ZP_08312660.1| ribonuclease P [Leuconostoc fallax KCTC 3537]
Length = 115
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K +F + L+ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPEEFQMVFNKHHSVANKYFIVYQLHKPGQKHF-RLGLSVSKKIGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ L + ++ + D ++IA+ + V ++
Sbjct: 60 VKRRIRQSL-LELKPLIPNELDLLVIARPAIAHQDQHFVKQQIVHVLK 106
>gi|283782564|ref|YP_003373318.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|297243218|ref|ZP_06927153.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
gi|283441622|gb|ADB14088.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|296888752|gb|EFH27489.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
Length = 135
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
FS L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL
Sbjct: 33 AFSGTFLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLRVIAK-NYESLLPAGCDVVLR 91
Query: 86 AKRDALFIPFKELCNHFVERVRR 108
AK A F L + +
Sbjct: 92 AKPSAAQSSFDSLQCQIQKLFGK 114
>gi|291532563|emb|CBL05676.1| ribonuclease P protein component, eubacterial [Megamonas
hypermegale ART12/1]
Length = 121
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ I+K+ F + + G + + + +V F KK G AV RNR
Sbjct: 5 LQKKLIVKENSDFQKIYRCGRSLANKNMVMYYCKAFHPSH--KVAFAAGKKLGNAVTRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L+E RL +K + +L+ + A+ + L F +R
Sbjct: 63 VKRLLREVYRLH-RHEIKDDYCLLLVGRAAAVDLKSTALEKSFYSLCKRA 111
>gi|254561548|ref|YP_003068643.1| ribonuclease P protein component [Methylobacterium extorquens DM4]
gi|254268826|emb|CAX24787.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens DM4]
Length = 165
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
M I L++R F +G S + + S +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPSETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRKS 123
+ S +
Sbjct: 121 TPRSSDSARP 130
>gi|116630437|ref|YP_819590.1| ribonuclease P [Lactobacillus gasseri ATCC 33323]
gi|238853337|ref|ZP_04643717.1| ribonuclease P protein component [Lactobacillus gasseri 202-4]
gi|282851874|ref|ZP_06261236.1| ribonuclease P protein component [Lactobacillus gasseri 224-1]
gi|300362681|ref|ZP_07058857.1| ribonuclease P [Lactobacillus gasseri JV-V03]
gi|311111577|ref|ZP_07712974.1| ribonuclease P protein component [Lactobacillus gasseri MV-22]
gi|122272626|sp|Q040F1|RNPA_LACGA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116096019|gb|ABJ61171.1| RNase P protein component [Lactobacillus gasseri ATCC 33323]
gi|238834025|gb|EEQ26282.1| ribonuclease P protein component [Lactobacillus gasseri 202-4]
gi|282556981|gb|EFB62581.1| ribonuclease P protein component [Lactobacillus gasseri 224-1]
gi|300353672|gb|EFJ69544.1| ribonuclease P [Lactobacillus gasseri JV-V03]
gi|311066731|gb|EFQ47071.1| ribonuclease P protein component [Lactobacillus gasseri MV-22]
Length = 122
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKEKQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + ++ D+++IA+ A + + + +R K
Sbjct: 60 RLKRFIRATL-TELKPEIRSDLDFLVIARPYARDFDMERTKKNLIHVLRLAK 110
>gi|319936676|ref|ZP_08011089.1| ribonuclease P protein component [Coprobacillus sp. 29_1]
gi|319808233|gb|EFW04798.1| ribonuclease P protein component [Coprobacillus sp. 29_1]
Length = 111
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K + F + N + +VG +V+KK G AV RN+
Sbjct: 1 MKKEYRIKKNEDFQTIIKDKKSVANRKFVIYYKVN---DCHLKVGISVSKKLGNAVVRNK 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R+++ V + K D+++I + L +K+ + +
Sbjct: 58 TKRQVRMMVHDVFDKTQK--MDFIVIVRNKFLESSYKDNIEDLKYLYDKINKR 108
>gi|149919111|ref|ZP_01907595.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
gi|149820041|gb|EDM79462.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
Length = 195
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 28/134 (20%)
Query: 6 ILKKRRQFALVKKGEL-RKGPFFSLEVLNNN--------------------------NSN 38
LK+RR+F V++G F + +S
Sbjct: 11 RLKQRREFLRVQRGGRKIHVRHFMVFSSPRRTVKTQPAPKRGGGGDADGEGRPVPDSSSL 70
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R G TVT+K G AV RNR++R ++E R L G D V +AK+ A F +
Sbjct: 71 PPTRCGITVTRKVGNAVVRNRIKRLVREVFRQNRTR-LPPGLDIVWVAKQQAAEANFSAV 129
Query: 99 CNHFVERVRRNKRS 112
F + +R+
Sbjct: 130 QADFERLLVELERA 143
>gi|307297276|ref|ZP_07577082.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916536|gb|EFN46918.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 142
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S L+++ F V KKG+ PFF + + N R+G ++ +K G A RNR
Sbjct: 8 LSKNERLRRKADFDRVFKKGKSIVDPFFVVLYVKN--GLPFSRIGISIRRKFGKAHLRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+RR +KE R + V G+D + IA++D +
Sbjct: 66 LRRLVKEVYRTN-KQVFPEGYDILFIARKDLSDL 98
>gi|261213268|ref|ZP_05927550.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|262172773|ref|ZP_06040451.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262402087|ref|ZP_06078651.1| ribonuclease P protein component [Vibrio sp. RC586]
gi|260837542|gb|EEX64245.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|261893849|gb|EEY39835.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262351733|gb|EEZ00865.1| ribonuclease P protein component [Vibrio sp. RC586]
Length = 107
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 12 QQAHSAGSPHLTIIARANNLS--HPRLGLAVPKKQIKTAVGRNRFKRLCRESFRLHQNQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL N + +R R
Sbjct: 70 AHK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 106
>gi|257792848|ref|YP_003183454.1| ribonuclease P protein component [Eggerthella lenta DSM 2243]
gi|257476745|gb|ACV57065.1| ribonuclease P protein component [Eggerthella lenta DSM 2243]
Length = 108
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R + + G+ P+ + VL RV F KK G AV RN +R
Sbjct: 1 METIKSRGDISDLFSCGKRLHTPYLTFIVLPTKQHGQQGRVAFIAGKKSGNAVWRNSAKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++ G+D + +AK + + ++ E ++R +
Sbjct: 61 RMRAICHDLGGPWA--GYDVIFLAKSGIMKSSYSKVHTACAETLKRAE 106
>gi|315453619|ref|YP_004073889.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
gi|315132671|emb|CBY83299.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
Length = 122
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL------PRVGFTVTKKQGCAVE 56
+ LK RQF+ V K G + F L L N+++ +G +V+KK G AV+
Sbjct: 2 VVSLKTSRQFSYVYKKGVKKHHGLFMLYTLPLNSTHRHFLGIQESVLGLSVSKKVGNAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH-----FVERVRRNKR 111
RN ++RR++ + LK V +AK +P+ L +H F +R KR
Sbjct: 62 RNLIKRRVRAIFQHLP---LKTPQAIVFVAKAGLHQLPYITLQDHIRQCLFSRASQRTKR 118
Query: 112 SY 113
+
Sbjct: 119 HH 120
>gi|269958146|ref|YP_003327935.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
gi|269306827|gb|ACZ32377.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
Length = 125
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + L++ +F V++G + +L +N + P+VGF V+K G +V+RN
Sbjct: 2 LPSTHRLRRPAEFGRTVRRGTRAGRTTVVVHLLVDNEGDAAPQVGFVVSKAVGNSVQRNL 61
Query: 60 MRRRLKEAVRLCAE----GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+E VR V V+ A A F EL + + + +
Sbjct: 62 VKRRLREIVRPLVATSGLAVFPEHSRAVVRALPAASTATFAELSRDVQAGLDKAVQRAAA 121
Query: 116 GK 117
+
Sbjct: 122 AR 123
>gi|218283268|ref|ZP_03489323.1| hypothetical protein EUBIFOR_01912 [Eubacterium biforme DSM 3989]
gi|218215958|gb|EEC89496.1| hypothetical protein EUBIFOR_01912 [Eubacterium biforme DSM 3989]
Length = 113
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K +F+ +++ + K F RVG +V KK G AV RN+
Sbjct: 1 MKKEFRVLKNYEFSSIIQNRQFVKSSSFVCYFQKRKLD--HARVGISVGKKLGNAVCRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+L+ V + G+D ++I + F+E N E R +
Sbjct: 59 VKRQLRSIV--DDVFTFEEGYDVIIIVRPAYTNKSFEENKNEMKENQNRINKR 109
>gi|56461739|ref|YP_157020.1| RNase P protein component [Idiomarina loihiensis L2TR]
gi|67461324|sp|Q5QZK1|RNPA_IDILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56180749|gb|AAV83471.1| RNase P protein component [Idiomarina loihiensis L2TR]
Length = 125
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVR 69
F V K + +L N PR+G TV+KK+ AV+RNR++R+++E R
Sbjct: 17 SHFQTVFSNPPVKAVTAHVTMLATPNELGHPRIGVTVSKKRAKRAVDRNRIKRQIRETFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
L + D V+IAK+ + L + R+ + ++ S
Sbjct: 77 LRQHKI--PAFDIVIIAKQGIVEQDNAALRDTLNYLWRKLAKRCEQYQSRS 125
>gi|108802371|ref|YP_642568.1| ribonuclease P [Mycobacterium sp. MCS]
gi|119866064|ref|YP_936016.1| ribonuclease P [Mycobacterium sp. KMS]
gi|126438351|ref|YP_001074042.1| ribonuclease P [Mycobacterium sp. JLS]
gi|123177783|sp|Q1B0S2|RNPA_MYCSS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226724|sp|A3Q8S4|RNPA_MYCSJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226725|sp|A1U8R8|RNPA_MYCSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|108772790|gb|ABG11512.1| ribonuclease P protein component [Mycobacterium sp. MCS]
gi|119692153|gb|ABL89226.1| ribonuclease P protein component [Mycobacterium sp. KMS]
gi|126238151|gb|ABO01552.1| ribonuclease P protein component [Mycobacterium sp. JLS]
Length = 118
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + +F+ V KG P L + N + PRVG V K G AV R+R+ RRL
Sbjct: 7 RMTRSTEFSTTVSKGVRSAQPDLVLHMANVLDDPSGPRVGLVVAKSVGNAVVRHRVSRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+ +V + L+ GH V+ A A L +RR + +
Sbjct: 67 RHSVHPMLDE-LQPGHRLVIRALPGAASATSARLHQELSAALRRARPRVEA 116
>gi|325294816|ref|YP_004281330.1| ribonuclease P protein component [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065264|gb|ADY73271.1| Ribonuclease P protein component [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 121
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L+K+ F V G +NN + PR GF +KK AV+RNR +R +
Sbjct: 14 RLRKQSDFKRVFDSGKSLGGVTVAFYFVSNNVD-YPRAGFIASKKISKRAVDRNRAKRLM 72
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E RL + D + IA++ L + ++ + F++ ++
Sbjct: 73 REVFRLNKHKLKP--VDIIFIARKGILGKKYHDVESDFLKLAKKA 115
>gi|315039283|ref|YP_004032851.1| ribonuclease P [Lactobacillus amylovorus GRL 1112]
gi|325957757|ref|YP_004293169.1| ribonuclease P [Lactobacillus acidophilus 30SC]
gi|312277416|gb|ADQ60056.1| ribonuclease P [Lactobacillus amylovorus GRL 1112]
gi|325334322|gb|ADZ08230.1| ribonuclease P [Lactobacillus acidophilus 30SC]
gi|327184390|gb|AEA32837.1| ribonuclease P [Lactobacillus amylovorus GRL 1118]
Length = 122
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G+ F + V+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYVVEKP-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLQINPNVDFLIITRPYARDFDIVKVRKNLLHALA 107
>gi|317489241|ref|ZP_07947758.1| ribonuclease P protein component [Eggerthella sp. 1_3_56FAA]
gi|316911642|gb|EFV33234.1| ribonuclease P protein component [Eggerthella sp. 1_3_56FAA]
Length = 108
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R + + G+ P+ + VL RV F KK G AV RN +R
Sbjct: 1 METIKSRGDISDLFSCGKRLHTPYLTFIVLPTKQHGQQGRVAFIAGKKSGNAVWRNSAKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++ G+D + +AK + + ++ E ++R +
Sbjct: 61 RMRAICHELGGPWA--GYDVIFLAKSGIMRSSYSKVHTACAETLKRAE 106
>gi|172036281|ref|YP_001802782.1| ribonuclease P [Cyanothece sp. ATCC 51142]
gi|171697735|gb|ACB50716.1| protein subunit of ribonuclease P [Cyanothece sp. ATCC 51142]
Length = 127
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQ-GCAV 55
+ L+ + F V +G+ + P + V + + + G +V++K AV
Sbjct: 3 LPKQHRLRHPKIFQTVYNRGKRYQSPHLVMRVFWQADQQDCTPPTQFGISVSQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR++R++K +RL +K G+ V++ KR+ ++ E +
Sbjct: 63 IRNRLKRQIKAVIRLFLPK-IKPGYQVVIVVKRNTTECKYEHFLRELEELL 112
>gi|322835124|ref|YP_004215151.1| ribonuclease P [Rahnella sp. Y9602]
gi|321170325|gb|ADW76024.1| ribonuclease P protein component [Rahnella sp. Y9602]
Length = 108
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V + R G + +L N PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 RHFTFVFQQPQRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L D+V++AK+ + + L + RR+ R +
Sbjct: 64 LN--QHTLPSMDFVVVAKKGVADLDNRALTEALEKLWRRHCRQAPA 107
>gi|294056001|ref|YP_003549659.1| ribonuclease P protein component [Coraliomargarita akajimensis DSM
45221]
gi|293615334|gb|ADE55489.1| ribonuclease P protein component [Coraliomargarita akajimensis DSM
45221]
Length = 114
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPR-VGFTVTKKQGCAVERN 58
+ L+ +R F V+ G+ F L+ ++ R +G +K+ G AV+RN
Sbjct: 3 VPTAKRLRTQRDFQQVRTEGKRFLCGPFILQWRKHSEDEGGSRRLGVIASKRVGNAVKRN 62
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R +R ++E R E L D V++ + F+EL + F++ + +
Sbjct: 63 RGKRLMRELFRRH-EQQLPKAVDIVIVLRNGYDRFSFEELESRFLKTCKTIHK 114
>gi|313112580|ref|ZP_07798241.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625102|gb|EFQ08396.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 167
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P + VL + RVG T TKK G AV+RNR RR +K
Sbjct: 37 IRRNSEFGRVYARGKSYVNPGLVMYVLKTRSKKT--RVGLTATKKIGHAVQRNRARRVMK 94
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
A+ + + G+D + +A+ + +L + + + + +
Sbjct: 95 AAIDEHLDYNI-GGYDLIFVARGMTPRLKSWQLSSVVAKLFAQAGLPDKAKR 145
>gi|58040257|ref|YP_192221.1| ribonuclease P protein component [Gluconobacter oxydans 621H]
gi|67461236|sp|Q5FPY1|RNPA_GLUOX RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|58002671|gb|AAW61565.1| Ribonuclease P protein component [Gluconobacter oxydans 621H]
Length = 124
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KKR QF V KG P +++L +++ RVGFTVTKK G +V RNR RRRL+
Sbjct: 1 MKKRPQFLRVAGKGRKVATPGMVVQILP-DDTATETRVGFTVTKKVGNSVIRNRTRRRLR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
EA+RL A D+VLI + F L + + +R+
Sbjct: 60 EALRLVAREDGLPSGDFVLIGRDKTRERDFSLLKDDLRQALRKG 103
>gi|296273899|ref|YP_003656530.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM 7299]
gi|296098073|gb|ADG94023.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM 7299]
Length = 111
Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S L R F + + G+ P F ++ +GF +KK G AV RN+
Sbjct: 4 LSKEYRLNSSRDFRQIYQSGKKWHTPSFVAFFRSSEKLE----IGFVTSKKVGNAVFRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RRRL+ V L E ++ G YV +AK + + EL F +R
Sbjct: 60 ARRRLRAIV-LENENIIITGK-YVFVAKDELFNKSYIELQKDFNFAFKR 106
>gi|119493477|ref|ZP_01624144.1| ribonuclease P [Lyngbya sp. PCC 8106]
gi|119452660|gb|EAW33840.1| ribonuclease P [Lyngbya sp. PCC 8106]
Length = 135
Score = 66.8 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 15/120 (12%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN------------NNNSNLLPRVGFTV 47
+ + L + F V +G RK +L L N + R+G ++
Sbjct: 2 LPKVHRLWHPQDFKAVYARGVHRKTSHLTLRALRCSPQPEDQISEILNQTQRATRIGISI 61
Query: 48 TKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++K AV RNR++R+++ A R L G D V++ K A+ + E + +
Sbjct: 62 SQKVSKRAVVRNRIKRQIRAAFRQLLSK-LSSGWDIVIVVKPTAIECNYAEFLQELEQLL 120
>gi|225873714|ref|YP_002755173.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
gi|225792901|gb|ACO32991.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
Length = 160
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQGCAVE 56
L+K + V ++ ++ P RVG T + G AVE
Sbjct: 7 ARLRKHADYQSVYAASRKQFSASMTYFCRVRPADAPPVLPSAAIPRVGLTAGRVMGKAVE 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RNR++RR++EAVR + +L D VL ++ + + F L E +
Sbjct: 67 RNRIKRRMREAVREHLQ-LLPGCVDVVLHPRKSVMTMEFTALSREVAEIFAKIAAR 121
>gi|300742658|ref|ZP_07072679.1| ribonuclease P protein component [Rothia dentocariosa M567]
gi|300381843|gb|EFJ78405.1| ribonuclease P protein component [Rothia dentocariosa M567]
Length = 127
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
++ QF+ + R G +L V R+GF V+K G AV RNR++RRL+E
Sbjct: 1 MRTSSQFSATFRSGTRSGRR-NLVVYTAQKPGNTTRIGFIVSKAVGNAVTRNRVKRRLRE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
G + A + ++EL + + + +
Sbjct: 60 LAAATVSTY-PQGLYIAVRALPASAGANWEELRADYRGALESSLKKLDRQDQ 110
>gi|159897295|ref|YP_001543542.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
gi|238687060|sp|A9AXK0|RNPA_HERA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159890334|gb|ABX03414.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
Length = 123
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V++G P L V + + R G V K G AVERNR
Sbjct: 1 MQRSQRLRSPRDFRRVREGGRTWSHPLLVLSVAPARANRV--RCGIVVRKSLGTAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++EA RL + ++ G D + I + ++++ +++ +
Sbjct: 59 YKRQVREATRLVYDQ-IRPGWDVIFIVRAGFRTAAWEQIQQAVSRLLQQAQ 108
>gi|32474816|ref|NP_867810.1| ribonuclease P protein component [Rhodopirellula baltica SH 1]
gi|48474354|sp|Q7UNR1|RNPA_RHOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|32445356|emb|CAD75357.1| probable ribonuclease P protein component [Rhodopirellula baltica
SH 1]
Length = 146
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 2 SNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNN----NSNLLP--------RVGFTVT 48
+ + +F +++G + + L ++ + P R+G T+
Sbjct: 13 PKSSRVVRSSEFTKALRRGGVAANDCLVVFALPHDVPDADGEPSPDESKTVKCRLGVTIP 72
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KK G AV RNR +R ++EA RL L G DYV+ K+D +K + FV+ V R
Sbjct: 73 KKTGNAVVRNRWKRLIREAFRLNQTQ-LPSGFDYVVRPKKDV-TADWKMIEKGFVKLVGR 130
Query: 109 NKRSYYSGKNFS 120
R S + S
Sbjct: 131 AVRRSQSSADRS 142
>gi|330993391|ref|ZP_08317326.1| Ribonuclease P protein component [Gluconacetobacter sp. SXCC-1]
gi|329759421|gb|EGG75930.1| Ribonuclease P protein component [Gluconacetobacter sp. SXCC-1]
Length = 116
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LKKR +F V KG P L+ L ++ R GFTVTKK G +V RNR RRR
Sbjct: 6 TRLKKRAEFLRVAAKGRKAPAPGLVLQALERGDTE-AARYGFTVTKKVGNSVVRNRARRR 64
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+E VRL G D V+I + F L + + +R+
Sbjct: 65 LREVVRLLGREKALRGVDIVVIGRSGTCGRRFDALMGDYRKALRKA 110
>gi|192360289|ref|YP_001984276.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
gi|190686454|gb|ACE84132.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
Length = 135
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
R F V + +L+ N PR+G + KK AV+RNR++R ++E R
Sbjct: 15 RDFQTVFDDAPFRASHQLFLILSRPNQLPHPRLGLVIAKKHVSLAVQRNRIKRLVREQFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
L + + G D ++++++ + E F ++++R + + S
Sbjct: 75 LQQQELA--GLDVIVLSRKGVADLENAEFVAQFRQQLQRILKKARQREASS 123
>gi|258622953|ref|ZP_05717968.1| ribonuclease P [Vibrio mimicus VM573]
gi|258626077|ref|ZP_05720928.1| ribonuclease P [Vibrio mimicus VM603]
gi|258581603|gb|EEW06501.1| ribonuclease P [Vibrio mimicus VM603]
gi|258584736|gb|EEW09470.1| ribonuclease P [Vibrio mimicus VM573]
Length = 118
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 23 QQAHSAGSPHLTIIARANNLS--HPRLGLAVPKKQIKTAVGRNRFKRLCRESFRLHQNQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL N + +R R
Sbjct: 81 AHK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|62182328|ref|YP_218745.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62129961|gb|AAX67664.1| RNase P, protein component (protein C5), processes tRNA, 45S RNA
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 138
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 AHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + D+V++AK+ + + L + RR+ R +
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGSDS 110
>gi|302559668|ref|ZP_07312010.1| ribonuclease P [Streptomyces griseoflavus Tu4000]
gi|302477286|gb|EFL40379.1| ribonuclease P [Streptomyces griseoflavus Tu4000]
Length = 123
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA V++G + + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGNRHLVVHLRSGATDPHAPGESAPPSRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + L G V+ A A +L +RR
Sbjct: 62 GAVVRNKVKRRLRHLMRQRVDR-LPPGSLVVVRALPGAGDADHAQLARDLDAALRR 116
>gi|258541761|ref|YP_003187194.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256632839|dbj|BAH98814.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256635896|dbj|BAI01865.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-03]
gi|256638951|dbj|BAI04913.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-07]
gi|256642005|dbj|BAI07960.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-22]
gi|256645060|dbj|BAI11008.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-26]
gi|256648115|dbj|BAI14056.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-32]
gi|256651168|dbj|BAI17102.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654159|dbj|BAI20086.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-12]
Length = 126
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKKR+QF L +G P L++ +++ + RVGFTVTKK G +V RNR+RRRL
Sbjct: 19 RLKKRKQFLFLASRGRKAPVPGLVLQLFRRPDAD-VARVGFTVTKKVGNSVVRNRVRRRL 77
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+E VR+ +G D VLI + + PF L F + +
Sbjct: 78 REVVRIVEADTPLNGLDLVLIGRGATINRPFTALVADFRKAL 119
>gi|146313781|ref|YP_001178855.1| ribonuclease P protein component [Enterobacter sp. 638]
gi|145320657|gb|ABP62804.1| ribonuclease P protein component [Enterobacter sp. 638]
Length = 108
Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 6 HFTFVFQQPYRAGTP-QITILGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+ D+V++AK+ + + L + RR+ R +
Sbjct: 65 RQHEL--PSMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLAH 106
>gi|295101865|emb|CBK99410.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii L2-6]
Length = 131
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ L VL + RVG T TKK G AV+RNR RR +K
Sbjct: 6 IRRNGEFGRVYARGKSYVNQALVLYVLKTRSKRT--RVGLTATKKIGHAVQRNRARRVMK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A+ + + G+D V +A+ + +L + + + + ++
Sbjct: 64 AAIDEHLDYNI-GGYDLVFVARGMTPRLKSWQLSAIVAKLFAQAGLPDKAKQPGAKPP 120
>gi|91202021|emb|CAJ75081.1| strongly similar to RNAse P protein [Candidatus Kuenenia
stuttgartiensis]
Length = 126
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L ++++F V G + K F L V + R+G V+KK G AV RNR++R L
Sbjct: 13 RLLRKKEFDKVFDEGTVFKNKFLVLYVAP--GAQKCSRMGLVVSKKIGNAVRRNRVKRLL 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRD 89
+E RL + D V+I +
Sbjct: 71 REVFRLNKNRLTVP-VDIVIIPRNT 94
>gi|320157822|ref|YP_004190201.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
gi|319933134|gb|ADV87998.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
Length = 107
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NNN S PR+G V KK AV RNR +R +E+ R +
Sbjct: 12 QQAHRAGSPHFTIIARNNNLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNTQHQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL F + R R
Sbjct: 70 --PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 106
>gi|269216522|ref|ZP_06160376.1| ribonuclease P protein component [Slackia exigua ATCC 700122]
gi|269130051|gb|EEZ61133.1| ribonuclease P protein component [Slackia exigua ATCC 700122]
Length = 114
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
+G+ + +L VLN+ + RV KK G AV RN +RRL+ +
Sbjct: 13 LFFSQGKRINTRYITLLVLNHTQHDHSGRVAVIAGKKIGGAVVRNAAKRRLRAVIHDIGG 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+G D +AK L P+ ++ + +
Sbjct: 73 PW--NGVDVAFMAKPLLLNAPYDKVVDACFHALE 104
>gi|297572343|ref|YP_003698117.1| ribonuclease P protein component [Arcanobacterium haemolyticum DSM
20595]
gi|296932690|gb|ADH93498.1| ribonuclease P protein component [Arcanobacterium haemolyticum DSM
20595]
Length = 120
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQGCAVE 56
+ + L+K +FA + R G + + + ++L +VGF V KK G +V
Sbjct: 2 LPAVNRLRKSGEFARTIRHGRRSGNSLVVVYFDVEDIIDEADLCTKVGFVVGKKVGNSVI 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+ + R+L+ R +K G V+ A DA +EL ++R++
Sbjct: 62 RHTVARKLRHVTRELLPN-MKPGT-VVVRANPDAAHATSQELLTALTNGLKRSR 113
>gi|78776722|ref|YP_393037.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
gi|78497262|gb|ABB43802.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
Length = 79
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+GFT TKK G AV+RNR +RRL+ +L+ G Y+ +AK+ ++L N F
Sbjct: 1 MGFTATKKIGNAVKRNRAKRRLRALF-FTYSSLLQDGT-YIFVAKQTISETSHQKLQNDF 58
Query: 103 VERVRRNKRSYYSGKNFS 120
+ + R + S
Sbjct: 59 EKVLSRLDTLKKKTDDQS 76
>gi|257452992|ref|ZP_05618291.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
gi|317059532|ref|ZP_07924017.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
gi|313685208|gb|EFS22043.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
Length = 110
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K + F + K + +SL N N + GF +KK G AV RNR++R +
Sbjct: 4 TIKSQDNFQNIYKTGKKIYGTYSLLFYKENQMN-HNQYGFVASKKIGNAVCRNRIKRLFR 62
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
E ++ E +L ++L+AK+ + I ++++ + + K
Sbjct: 63 EFIKQN-EILLPKFTTFILVAKKKSGEEIKTIKYEQIEKDLYKIFKIKK 110
>gi|251791814|ref|YP_003006535.1| ribonuclease P [Dickeya zeae Ech1591]
gi|271502721|ref|YP_003335747.1| ribonuclease P protein component [Dickeya dadantii Ech586]
gi|247540435|gb|ACT09056.1| ribonuclease P protein component [Dickeya zeae Ech1591]
gi|270346276|gb|ACZ79041.1| ribonuclease P protein component [Dickeya dadantii Ech586]
Length = 119
Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L F+ V ++ + P ++ N PR+G TV KK A ERNR
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGTPQITILGRPNTLG--HPRIGLTVAKKHVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +E+ RL + D+V+IAK+ + + L + RR+ R ++
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVIAKKGVSELDNRTLTEALEKLWRRHCRLAHA 118
>gi|197294710|ref|YP_001799251.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
gi|226736871|sp|B1VAN7|RNPA_PHYAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171854037|emb|CAM12010.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
Length = 115
Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V + + R G + + N N + +V KK G A ERN +
Sbjct: 1 MKRKYILKKESEITAVFRSKKRCGNSSFIIYYSKQNVNTYFKFALSVGKKYGKAHERNLI 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+RRL+ +R L +V++ K A + F++L F +
Sbjct: 61 KRRLRAIIR-NYSSNLNPAFFFVIVIKPPAKNLTFQQLKTTFAK 103
>gi|297627572|ref|YP_003689335.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296923337|emb|CBL57938.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 142
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 44/130 (33%), Gaps = 12/130 (9%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQG 52
+ L+ +F +V+ G P + N +VGF V+KK G
Sbjct: 2 LPTAARLRNSAEFRSIVRHGVRVGRPTLVVHADLAEHAPRGNTPGPTSTKVGFVVSKKVG 61
Query: 53 CAVERNRMRRRLKEAVR----LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RNR++RRL+ R V G V++ A K L F R
Sbjct: 62 NAVTRNRVKRRLRHMARARVVASTADVPLPGALRVVVRALPAAATEPKRLAGDFDSAWDR 121
Query: 109 NKRSYYSGKN 118
+
Sbjct: 122 ALARLTPAPS 131
>gi|260774976|ref|ZP_05883876.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609066|gb|EEX35225.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
Length = 107
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NNN S PR+G V KK AV RNR +R +E+ R +
Sbjct: 12 QQAHRAGSPHFTIIARNNNLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 70 AHK--DFVVIAKKSAQDLSNEEMFKLFDKLWQRLSRPSR 106
>gi|269129166|ref|YP_003302536.1| ribonuclease P protein component [Thermomonospora curvata DSM
43183]
gi|268314124|gb|ACZ00499.1| ribonuclease P protein component [Thermomonospora curvata DSM
43183]
Length = 122
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN-------SNLLPRVGFTVTKKQG 52
+ + +++R +F V++G + +L ++ + PR GF V + G
Sbjct: 2 LPSGHRMRRRDEFTLTVRRGRRAGRTHIVVHLLRRDDLPEGLPAAERAPRAGFVVGRTVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
AV RN++RRRL+ V + L G V+ A A KEL + R R
Sbjct: 62 NAVVRNKVRRRLRHLVAQHLDR-LPPGSLLVVRANPAAATAGHKELAADLESALDRLLRR 120
Query: 113 Y 113
Sbjct: 121 R 121
>gi|329114455|ref|ZP_08243217.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
gi|326696531|gb|EGE48210.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
Length = 127
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKKR+QF L +G P L++ +++ + RVGFTVTKK G +V RNR+RRRL
Sbjct: 20 RLKKRKQFLFLASRGRKAPVPGLVLQLFRRPDTD-VARVGFTVTKKVGNSVVRNRVRRRL 78
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+E VR+ +G D VLI + + PF L F + +
Sbjct: 79 REVVRIVEADTPLNGLDLVLIGRSATINRPFVALVADFRKALA 121
>gi|58584260|ref|YP_203276.1| ribonuclease P [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58428854|gb|AAW77891.1| ribonuclease P, protein component [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 159
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 25 PRSARVRTRAQYTVVFDNARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 81
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 82 IKRVLRDAMRHLLPEL--PGGDYVIVARSAAAKATNPQIRDAFLRLLRRA 129
>gi|312794743|ref|YP_004027666.1| ribonuclease p protein component [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312876165|ref|ZP_07736152.1| ribonuclease P protein component [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796980|gb|EFR13322.1| ribonuclease P protein component [Caldicellulosiruptor
lactoaceticus 6A]
gi|312181883|gb|ADQ42053.1| ribonuclease P protein component [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 119
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWI-LENIDKIKQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|222530705|ref|YP_002574587.1| ribonuclease P protein component [Caldicellulosiruptor bescii DSM
6725]
gi|222457552|gb|ACM61814.1| ribonuclease P protein component [Caldicellulosiruptor bescii DSM
6725]
Length = 119
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWI-LENMDKIKQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|163795449|ref|ZP_02189416.1| Ribonuclease P protein component [alpha proteobacterium BAL199]
gi|159179435|gb|EDP63966.1| Ribonuclease P protein component [alpha proteobacterium BAL199]
Length = 126
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNN----NSNLLPRVGFTVTKKQGCAVER 57
+ L R F +G P L+V + + PRVGFT ++K G AV R
Sbjct: 7 PALSRLLSRADFLRAARGVKAVAPGLVLQVRRRSPDETGDDTRPRVGFTASRKVGNAVVR 66
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
NR RRRL+ AV + G DYVLIA+ + EL + + R +
Sbjct: 67 NRSRRRLRAAVTDVLSARAEAGFDYVLIARAGTAERTYDELLADLGKALDRARS 120
>gi|46397715|sp|Q7X5L2|RNPA_THEFI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908458|gb|AAO88971.1| RNase P protein subunit [Thermus filiformis]
Length = 240
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F +KKG +G + L VG V+KK G AV RN++R
Sbjct: 136 KGLVSLKGDRAFQRLKKGRSGRGRLVLVRWLPRQEGVA---VGIVVSKKVGKAVVRNKVR 192
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + D ++IA+ +A F EL ++++
Sbjct: 193 ----RRIREILRRLHLPPADLLVIAQPEAKDAGFAELARDLFLALKKS 236
>gi|312128803|ref|YP_003993677.1| ribonuclease p protein component [Caldicellulosiruptor
hydrothermalis 108]
gi|311778822|gb|ADQ08308.1| ribonuclease P protein component [Caldicellulosiruptor
hydrothermalis 108]
Length = 119
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWI-LENIDKIKQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|255746811|ref|ZP_05420757.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262155891|ref|ZP_06029013.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|262167095|ref|ZP_06034810.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|255735568|gb|EET90967.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262024481|gb|EEY43167.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|262030343|gb|EEY48985.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|327482919|gb|AEA77326.1| Ribonuclease P protein component [Vibrio cholerae LMA3894-4]
Length = 107
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 12 QQAHSAGSPHLTIIARANNLS--HPRLGLAVPKKQIKTAVGRNRFKRICRESFRLHQNQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL N + +R R
Sbjct: 70 ANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 106
>gi|312728|emb|CAA78594.1| RNAse P [Bacillus subtilis subsp. subtilis str. 168]
Length = 83
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
N RVG +V+KK G AV RNR++R +++A E DY++IA++ A + ++
Sbjct: 4 ENDELRVGLSVSKKIGNAVMRNRIKRLIRQAF--LEEKERLKEKDYIIIARKPASQLTYE 61
Query: 97 ELCNHFVERVR 107
E R
Sbjct: 62 ETKKSLQHLFR 72
>gi|297621042|ref|YP_003709179.1| Ribonuclease P protein component [Waddlia chondrophila WSU 86-1044]
gi|297376343|gb|ADI38173.1| Ribonuclease P protein component [Waddlia chondrophila WSU 86-1044]
Length = 115
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
S L K+ QF V + G+ G F +E + N + R+G TV++K G AV+RNR
Sbjct: 6 SKQSRLLKKYQFLRVVRYGKRHAGNFLVVESVKNRLNR--SRLGITVSRKFGKAVQRNRF 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+R ++E R + G D + + A + F+ + ++
Sbjct: 64 KRLIREGFR-QLGSLRNSGIDIHVKPRSKAKDVDFEMMRTELSALLK 109
>gi|170026452|ref|YP_001722957.1| ribonuclease P [Yersinia pseudotuberculosis YPIII]
gi|186897492|ref|YP_001874604.1| ribonuclease P [Yersinia pseudotuberculosis PB1/+]
gi|169752986|gb|ACA70504.1| ribonuclease P protein component [Yersinia pseudotuberculosis
YPIII]
gi|186700518|gb|ACC91147.1| ribonuclease P protein component [Yersinia pseudotuberculosis
PB1/+]
Length = 108
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L N PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SHFTFVFQQPQRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L D+V++ K+ + + L + RR+ R +
Sbjct: 64 LH--QHALPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 107
>gi|212704365|ref|ZP_03312493.1| hypothetical protein DESPIG_02420 [Desulfovibrio piger ATCC 29098]
gi|212672224|gb|EEB32707.1| hypothetical protein DESPIG_02420 [Desulfovibrio piger ATCC 29098]
Length = 131
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+ +++ +G F + V N R+G V++K G AV RNR
Sbjct: 7 LPRQSRIRKQAEYSACYERGRRYHTEHFLVFVRPRENG-ACTRMGMAVSRKVGKAVTRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
++R L+E RL +L D V +AK+ +
Sbjct: 66 VKRLLREFFRLH-RALLPEHLDIVAVAKKHTGAADLNQ 102
>gi|254416227|ref|ZP_05029981.1| ribonuclease P protein component [Microcoleus chthonoplastes PCC
7420]
gi|196176909|gb|EDX71919.1| ribonuclease P protein component [Microcoleus chthonoplastes PCC
7420]
Length = 134
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN-----------------NNNSNLLPR 42
+ LK R F V KG R G ++ L+ N + R
Sbjct: 2 LPQANRLKHWRDFKAVYQKGIRRYGRHLTVRGLHLPRVSHEKGLRSGKLQLNPKNLPPTR 61
Query: 43 VGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G +V++K AV RNR++R+++ A+R LK G ++ + AL + +
Sbjct: 62 IGISVSQKVSKKAVVRNRLKRQIRAALRQLLPR-LKPGWHVIVGVRPSALECDYAQFLQE 120
Query: 102 FVERV 106
+ +
Sbjct: 121 LEQLL 125
>gi|227893840|ref|ZP_04011645.1| ribonuclease P [Lactobacillus ultunensis DSM 16047]
gi|227864329|gb|EEJ71750.1| ribonuclease P [Lactobacillus ultunensis DSM 16047]
Length = 122
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G+ F + V+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYVVEKA-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLQINPHVDFLIITRPYARNFDMVKVRKNLLHALALAHIIEEMPDE 118
Query: 119 FSRK 122
K
Sbjct: 119 VEEK 122
>gi|27364439|ref|NP_759967.1| ribonuclease P [Vibrio vulnificus CMCP6]
gi|37678188|ref|NP_932797.1| ribonuclease P [Vibrio vulnificus YJ016]
gi|29427709|sp|Q8DDI3|RNPA_VIBVU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397707|sp|Q7MQK4|RNPA_VIBVY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27360558|gb|AAO09494.1| ribonuclease P protein component [Vibrio vulnificus CMCP6]
gi|37196927|dbj|BAC92768.1| RNase P protein component [Vibrio vulnificus YJ016]
Length = 118
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NNN S PR+G V KK AV RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIARNNNLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNTQHQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL F + R R
Sbjct: 81 --PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 117
>gi|114327388|ref|YP_744545.1| ribonuclease P protein component [Granulibacter bethesdensis
CGDNIH1]
gi|114315562|gb|ABI61622.1| ribonuclease P protein component [Granulibacter bethesdensis
CGDNIH1]
Length = 129
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LK+R +F V KG L+ L ++ R+G+TVTKK G AV RNR RRRL
Sbjct: 17 RLKRRAEFLRVASKGRKAAVHGLVLQALPAQAADAPLRIGYTVTKKVGNAVVRNRTRRRL 76
Query: 65 KEAVRLCAEGVLKHG-----HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+EA RL A + G HD VLI + PF L + + +
Sbjct: 77 REAARLVAREYDQAGTPLSAHDLVLIGRDSTRGRPFDSLLDDLRRALAKA 126
>gi|323694898|ref|ZP_08109048.1| ribonuclease P [Clostridium symbiosum WAL-14673]
gi|323500988|gb|EGB16900.1| ribonuclease P [Clostridium symbiosum WAL-14673]
Length = 89
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ V+ + R+G +V+KK G +V R+ + R ++E+ RL + +K G D V++A+
Sbjct: 1 MYVIKTEREDT--RIGISVSKKVGNSVVRHHITRLVRESYRLNKDR-VKTGLDIVVVARA 57
Query: 89 DALFIPFKELCNHFVER 105
A FK++ + ++
Sbjct: 58 AAKESDFKKIESAYLHL 74
>gi|317011579|gb|ADU85326.1| ribonuclease P protein component [Helicobacter pylori SouthAfrica7]
Length = 161
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPR-------------------VGFT 46
LK + +F V +KG + PFFSL VL+ + +G +
Sbjct: 19 LKNKSEFDRVYRKGFKKHNPFFSLFVLDLPKEPPKEKESLKDPLSYRLKDKETLFLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G A +RN ++RRL+ A L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAAKRNLIKRRLRSLASRHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLETL 136
>gi|238783047|ref|ZP_04627074.1| Ribonuclease P protein component [Yersinia bercovieri ATCC 43970]
gi|238797846|ref|ZP_04641338.1| Ribonuclease P protein component [Yersinia mollaretii ATCC 43969]
gi|238716048|gb|EEQ08033.1| Ribonuclease P protein component [Yersinia bercovieri ATCC 43970]
gi|238718262|gb|EEQ10086.1| Ribonuclease P protein component [Yersinia mollaretii ATCC 43969]
Length = 108
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + LR G + +L N PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SHFTFVFQQPLRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L D+V++ K+ + + L + RR+ R +
Sbjct: 64 LH--QHTLPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 107
>gi|261250644|ref|ZP_05943219.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
gi|260939213|gb|EEX95200.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
Length = 107
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ N+ S PR+G V KK AV RNR +R +E+ R +
Sbjct: 12 QQAHRAGSPHFTIIARKNSLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
DYV+IAK+ A + +E+ F + +R R
Sbjct: 70 AHK--DYVVIAKKTAQDLSNEEIFKLFDKLWQRLSRPSR 106
>gi|299783734|gb|ADJ41732.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Lactobacillus fermentum CECT 5716]
Length = 82
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ RVG +V KK G AV+R ++RR+++ + L + LK D+++IA++ A +
Sbjct: 2 QKPNQPHFRVGISVGKKVGNAVQRGWVKRRIRQTL-LEVKPELKQDVDFLVIARKSAADL 60
Query: 94 PFKELCNHFVERV 106
KE+ + V +
Sbjct: 61 SMKEIKKNLVHAL 73
>gi|284993438|ref|YP_003411993.1| ribonuclease P protein component [Geodermatophilus obscurus DSM
43160]
gi|284066684|gb|ADB77622.1| ribonuclease P protein component [Geodermatophilus obscurus DSM
43160]
Length = 127
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP---------RVGFTVTKK 50
+ L++R F V + G P L L P R GF V K
Sbjct: 2 LPAQARLRRRPDFTAVVRSGRRAGRPTMVLHYLPERPVTPTPGDAGTVGGPRAGFVVGKT 61
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G +V R+R+ RRL+ V L L D V+ A+ +A +L + R
Sbjct: 62 VGNSVVRHRVTRRLRAVV-LDQLDRLPPTADLVVRARPEAATATSVDLARDLSAGLDRVL 120
Query: 111 RSY 113
Sbjct: 121 EPR 123
>gi|152993158|ref|YP_001358879.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
gi|151425019|dbj|BAF72522.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
Length = 96
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
+ P+F L + +VGF +KK G AV RNR +R L+ + +LK G
Sbjct: 7 KTWHSPYFVLFYKRSEE----YKVGFVASKKIGNAVHRNRAKRLLRAHFIENID-LLKSG 61
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRR 108
YVL+AK L F E ++ +++
Sbjct: 62 S-YVLVAKPALLSKSFSESRKAYLHALKK 89
>gi|148270461|ref|YP_001244921.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
gi|166228258|sp|A5IMC2|RNPA_THEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147736005|gb|ABQ47345.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
Length = 117
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F + K GE + +F + N R+G V +K G A RN+++R ++E R
Sbjct: 16 DFLTIFKEGESLQNEYFVVLFKKNGLD--YSRLGIVVKRKFGKATRRNKLKRWVREIFR- 72
Query: 71 CAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
++GV+ G D V+I ++ + F + + ++R
Sbjct: 73 KSKGVIPKGFDIVVIPRKKLSEEFEQVDFWAVHEKLLNLLKR 114
>gi|238855504|ref|ZP_04645809.1| ribonuclease P protein component [Lactobacillus jensenii 269-3]
gi|260665208|ref|ZP_05866057.1| ribonuclease P protein component [Lactobacillus jensenii SJ-7A-US]
gi|282931530|ref|ZP_06337029.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|313472763|ref|ZP_07813251.1| ribonuclease P protein component [Lactobacillus jensenii 1153]
gi|238831870|gb|EEQ24202.1| ribonuclease P protein component [Lactobacillus jensenii 269-3]
gi|239529256|gb|EEQ68257.1| ribonuclease P protein component [Lactobacillus jensenii 1153]
gi|260560945|gb|EEX26920.1| ribonuclease P protein component [Lactobacillus jensenii SJ-7A-US]
gi|281304337|gb|EFA96440.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
Length = 122
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V KG+ F + L N RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFQTVFNKGDSVANRAFVVYKLIRP-ENKHFRVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++I + A E+ + + +
Sbjct: 60 RLKRYIRATL-TEVKDEVDARADFLVITRPYAREFTMAEVKKNLLHAM 106
>gi|156972772|ref|YP_001443679.1| ribonuclease P [Vibrio harveyi ATCC BAA-1116]
gi|163803613|ref|ZP_02197479.1| ribonuclease P [Vibrio sp. AND4]
gi|269962687|ref|ZP_06177032.1| ribonuclease P [Vibrio harveyi 1DA3]
gi|166228259|sp|A7N1E4|RNPA_VIBHB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156524366|gb|ABU69452.1| hypothetical protein VIBHAR_00437 [Vibrio harveyi ATCC BAA-1116]
gi|159172607|gb|EDP57465.1| ribonuclease P [Vibrio sp. AND4]
gi|269832610|gb|EEZ86724.1| ribonuclease P [Vibrio harveyi 1DA3]
Length = 118
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NN S PR+G V KK AV RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIARNNKLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL F + R R
Sbjct: 81 --PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 117
>gi|188581561|ref|YP_001925006.1| ribonuclease P protein component [Methylobacterium populi BJ001]
gi|179345059|gb|ACB80471.1| ribonuclease P protein component [Methylobacterium populi BJ001]
Length = 169
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 7/130 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-------VGFTVTKKQGC 53
MS I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MSTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPGETRDGGPAEGVFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A D V+IA+R AL PF+ L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAAEAPSIEADVVVIARRPALDAPFESLVADLRRALHTVTRPA 120
Query: 114 YSGKNFSRKS 123
+ +
Sbjct: 121 PPRSGDASRP 130
>gi|260774543|ref|ZP_05883456.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
gi|260610449|gb|EEX35655.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
Length = 118
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ +NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 23 QQAHRAGSPHFTIIARDNNLS--HPRLGLAVPKKQIKTAVGRNRFKRIARESFRLHQHKL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL F + R R
Sbjct: 81 ANK--DFVVIAKKTAQDLSNEELFTLFDKLWHRLSRPSR 117
>gi|330861749|emb|CBX71923.1| ribonuclease P protein component [Yersinia enterocolitica W22703]
Length = 108
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L N PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SHFTFVFQQPQRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLARESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L D+V++ K+ + + L + RR+ R +
Sbjct: 64 LH--QHTLPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 107
>gi|170077610|ref|YP_001734248.1| ribonuclease P [Synechococcus sp. PCC 7002]
gi|238689044|sp|B1XJD2|RNPA_SYNP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169885279|gb|ACA98992.1| ribonuclease P protein component [Synechococcus sp. PCC 7002]
Length = 116
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERN 58
+ LK R F + +G+ +G ++ +L + ++G ++++K AV RN
Sbjct: 3 LPKEHRLKHWRDFKTIYSQGKRFRGDALAIILLPQPAAPT--KIGISISRKVSKKAVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RR++ A R ++ G V+ + +A ++ +
Sbjct: 61 LIKRRIRHACRTLLPQ-IQPGWHIVIAVRYNARECEYEHFLQELKRLL 107
>gi|330505871|ref|YP_004382740.1| ribonuclease P [Pseudomonas mendocina NK-01]
gi|328920157|gb|AEB60988.1| ribonuclease P [Pseudomonas mendocina NK-01]
Length = 84
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K AVERNR++R+++E+ RL + + G D V++A++ + EL F + +R
Sbjct: 5 KSVKLAVERNRIKRQIRESFRLNQDNL--TGWDIVVVARKGLGDLENGELAQQFGKLWKR 62
Query: 109 NKRSYYSGKN 118
RS S
Sbjct: 63 LARSRPSRDA 72
>gi|206901604|ref|YP_002251656.1| ribonuclease P protein component [Dictyoglomus thermophilum H-6-12]
gi|226736861|sp|B5YBN8|RNPA_DICT6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206740707|gb|ACI19765.1| ribonuclease P protein component [Dictyoglomus thermophilum H-6-12]
Length = 120
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 7 LKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+K+ F V + F + + R+G +V KK G AV RNR++R +
Sbjct: 12 LRKQEDFLRVLREGRPYSLSKSFIIYIRK---GAEKRRIGISVNKKVGKAVVRNRIKRLI 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRN 109
+E RL L+ + ++I K + F ++ + ++ +
Sbjct: 69 REVYRLHRP-YLREDIEMLVIVKPGENIKDLDFHKVKDMLIKIWEKA 114
>gi|311897305|dbj|BAJ29713.1| putative ribonuclease P protein component [Kitasatospora setae
KM-6054]
Length = 142
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN------------------NSNLLPR 42
+ L++R+ FA K R G + L R
Sbjct: 2 LPTENRLRRRQDFAAAVKRGRRAGRPLLVVHLQREAVPEAGSDRNSDSRPHVAEGLPPAR 61
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
GF V+K G AV RN ++RRL+ V L G V+ A A P+ +L +
Sbjct: 62 AGFVVSKAVGPAVVRNAVKRRLRHLVGERLSR-LPAGSLIVVRALPAAATAPYPDLAHDL 120
Query: 103 VERVRRNKRSYYSG 116
+RR RS +G
Sbjct: 121 DAALRRVLRSEPAG 134
>gi|269122889|ref|YP_003305466.1| ribonuclease P protein component [Streptobacillus moniliformis DSM
12112]
gi|268314215|gb|ACZ00589.1| ribonuclease P protein component [Streptobacillus moniliformis DSM
12112]
Length = 109
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+K ++F V KG+ G + + N + R+GF +KK G +V R+R +R L+
Sbjct: 4 LRKSKEFNRVYNKGKKLSGKYILIFEYNAKSQ----RLGFVASKKTGNSVYRSRAKRLLR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
EA RL + + + +YVL+AK I ++++ +R K
Sbjct: 60 EAARLNID-LFRLDKEYVLVAKSIFKDKMKEIKYQDIEQDLKNIFKRKK 107
>gi|15640038|ref|NP_062590.1| ribonuclease P [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591468|ref|ZP_01678741.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|147674882|ref|YP_001218406.1| ribonuclease P [Vibrio cholerae O395]
gi|153819846|ref|ZP_01972513.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|153821956|ref|ZP_01974623.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|153830820|ref|ZP_01983487.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|227080243|ref|YP_002808794.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|229508292|ref|ZP_04397796.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229508869|ref|ZP_04398360.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229515954|ref|ZP_04405411.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229517140|ref|ZP_04406586.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229520179|ref|ZP_04409606.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229524908|ref|ZP_04414313.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229530207|ref|ZP_04419596.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229606566|ref|YP_002877214.1| ribonuclease P [Vibrio cholerae MJ-1236]
gi|254226945|ref|ZP_04920511.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|254291133|ref|ZP_04961930.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|254851571|ref|ZP_05240921.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297581959|ref|ZP_06943879.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|298501192|ref|ZP_07010991.1| ribonuclease P [Vibrio cholerae MAK 757]
gi|13878727|sp|Q9KVY2|RNPA_VIBCH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|172047496|sp|A5F483|RNPA_VIBC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808097|sp|C3LP79|RNPA_VIBCM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9654397|gb|AAF93184.1| ribonuclease P protein component [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546670|gb|EAX56852.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|125620550|gb|EAZ48918.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|126509607|gb|EAZ72201.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|126520495|gb|EAZ77718.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|146316765|gb|ABQ21304.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|148873704|gb|EDL71839.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|150422978|gb|EDN14928.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|227008131|gb|ACP04343.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|227011991|gb|ACP08201.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|229332340|gb|EEN97827.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229338489|gb|EEO03506.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229342773|gb|EEO07764.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229346203|gb|EEO11175.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229347054|gb|EEO12016.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229354144|gb|EEO19076.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229354565|gb|EEO19487.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229369221|gb|ACQ59644.1| ribonuclease P protein component [Vibrio cholerae MJ-1236]
gi|254847276|gb|EET25690.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297533826|gb|EFH72667.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|297540064|gb|EFH76126.1| ribonuclease P [Vibrio cholerae MAK 757]
Length = 118
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 23 QQAHSAGSPHLTIIARANNLS--HPRLGLAVPKKQIKTAVGRNRFKRICRESFRLHQNQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL N + +R R
Sbjct: 81 ANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|320161694|ref|YP_004174919.1| ribonuclease P protein component [Anaerolinea thermophila UNI-1]
gi|319995548|dbj|BAJ64319.1| ribonuclease P protein component [Anaerolinea thermophila UNI-1]
Length = 122
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ R F V++ L V+ NS R+G + G AV+RNR
Sbjct: 1 MKRRFRLRHRSDFERVRRAGKTIPHPLVLFVVA-PNSLDTVRIGVVAGRVVGSAVQRNRA 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L+ ++ L G D V A+R + F + E ++R
Sbjct: 60 KRWLRACLQEFLPA-LPPGWDVVAFARRPIIEAGFWKTRAAVEESLKRA 107
>gi|290477352|ref|YP_003470273.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus bovienii SS-2004]
gi|289176706|emb|CBJ83515.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus bovienii SS-2004]
Length = 108
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G TV KK A ERNR++R +E+ RL + D+V++ +
Sbjct: 22 ITILGRLNELGHPRIGLTVAKKNVKRAHERNRIKRLARESFRLNQHNL--PSMDFVVLVR 79
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYY 114
+ + +EL + RR+ R
Sbjct: 80 KGVAELDNRELTEALGKLWRRHCRLVR 106
>gi|292669290|ref|ZP_06602716.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
gi|292649131|gb|EFF67103.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
Length = 130
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ I+K+R F V G + G L VL + + +VGF KK GCA R+R
Sbjct: 8 LPRAKIIKRRSDFQNVYQNGAVVPGRGMILYVL--RDPRVAGKVGFAAGKKLGCAAVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+EA R + L+ +LI + ++ RR K
Sbjct: 66 TKRLLREAYR-HMQHELRTDVGILLIGRAGLAACKMQDAAAELRRLARRAK 115
>gi|92115432|ref|YP_575360.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
gi|122419004|sp|Q1QS97|RNPA_CHRSD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91798522|gb|ABE60661.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
Length = 128
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+ V K L VL N+ PRVGF +KK AV+RNR++R ++E+ RL
Sbjct: 17 DYQHVFAHASFKVHGKGLLVLARPNALGYPRVGFVFSKKNVRRAVDRNRLKRLVRESFRL 76
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+ + D +++A+R + L RR ++ S S
Sbjct: 77 QSHRL--PAVDIIVLARRGVDALDNATLHRQLHGMWRRLEKDVRKQSVASTPS 127
>gi|254456017|ref|ZP_05069446.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083019|gb|EDZ60445.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
Length = 113
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKKQGCAVERNRM 60
S I L K +F + K + F ++ N N + F KK G AV+RN++
Sbjct: 3 SKILALSKNEEFKNLLKQKKISNKFVTIFFGTLENKDNKKLNISFVTKKKIGNAVKRNKI 62
Query: 61 RRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RRL+ + + + +K + Y++IAK L +K + + + + K
Sbjct: 63 KRRLRNIINDAVKKISIKFNYSYLVIAKSTMLNSDYKNIKESLFQDLEKIK 113
>gi|259910297|ref|YP_002650653.1| Ribonuclease P protein component [Erwinia pyrifoliae Ep1/96]
gi|224965919|emb|CAX57452.1| Ribonuclease P protein component [Erwinia pyrifoliae Ep1/96]
Length = 108
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N+ PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 12 QQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + L + RR+ R
Sbjct: 70 --PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCR 103
>gi|330447271|ref|ZP_08310921.1| ribonuclease P protein component [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491462|dbj|GAA05418.1| ribonuclease P protein component [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 107
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N PR+G V KK AV+RNR +R ++E+ RL + D+V+IAK
Sbjct: 22 LTILARSNELNCPRLGLAVPKKQIKNAVDRNRFKRIVRESFRL--KQHQLPAKDFVVIAK 79
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYY 114
+ A + +EL + R R
Sbjct: 80 KSANELSNEELFKLLDKLWHRLSRPSR 106
>gi|238750291|ref|ZP_04611793.1| Ribonuclease P protein component [Yersinia rohdei ATCC 43380]
gi|238711524|gb|EEQ03740.1| Ribonuclease P protein component [Yersinia rohdei ATCC 43380]
Length = 108
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V ++ + P ++ L N PR+G T+ KK A ERNR++R +E+
Sbjct: 5 SHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTIAKKHVKRAHERNRIKRLTRESF 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RL D+V++ K+ + + L + RR+ R +
Sbjct: 63 RLH--QHTLPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 107
>gi|256826458|ref|YP_003150418.1| ribonuclease P protein component [Kytococcus sedentarius DSM 20547]
gi|256689851|gb|ACV07653.1| ribonuclease P protein component [Kytococcus sedentarius DSM 20547]
Length = 93
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
++ RVGF V+K+ G +V R+R++RRL+ V L GHD V+ A A
Sbjct: 13 DSTTDPHPVRVGFVVSKQVGNSVVRSRVQRRLRHVVAERL-SELPVGHDLVVRAHPAAAT 71
Query: 93 IPFKELCNHFVERVRRNKRS 112
+ L ++R +
Sbjct: 72 AEWGRLVADLDRCLQRARPR 91
>gi|293380889|ref|ZP_06626925.1| putative ribonuclease P protein component [Lactobacillus crispatus
214-1]
gi|295693885|ref|YP_003602495.1| ribonuclease p protein component [Lactobacillus crispatus ST1]
gi|290922562|gb|EFD99528.1| putative ribonuclease P protein component [Lactobacillus crispatus
214-1]
gi|295031991|emb|CBL51470.1| Ribonuclease P protein component [Lactobacillus crispatus ST1]
Length = 122
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G+ F + + N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYKVEKT-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLQINPHVDFLIITRPYARDFNMAQVRKNLLHAL 106
>gi|308235531|ref|ZP_07666268.1| ribonuclease P protein component [Gardnerella vaginalis ATCC 14018]
Length = 145
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+++ R+G V+K G AV RN+++RR + + E +L +G D VL AK A F
Sbjct: 42 KNDVALRLGLAVSKSVGKAVIRNKVKRRFRVIAKEH-ESLLPYGCDVVLRAKPTAAQSSF 100
Query: 96 KELCNHFVERVRRNKRSYYSGKNF 119
L + + ++ F
Sbjct: 101 DSLNEQIKKIFGKIAKNLQDQNQF 124
>gi|328471233|gb|EGF42135.1| ribonuclease P [Vibrio parahaemolyticus 10329]
Length = 118
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NN S PR+G V KK AV RNR +R +E+ R
Sbjct: 23 QQAHRAGSPHFTIIARNNKLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFR--NSQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 79 QLPNKDFVVIAKKSAQDLSNEEILKLFDKLWQRLSRPSR 117
>gi|117927033|ref|YP_867650.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
gi|117610789|gb|ABK46244.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
Length = 130
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
+ F L + + S PRVG TV++K G A RNR++R +E R + L G
Sbjct: 39 RVQSRAFVLY--SRDGSGADPRVGLTVSRKVGKAYVRNRIKRVARELFRSNRQR-LAFGR 95
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
D+VLIA+ A + L + + R
Sbjct: 96 DFVLIARNRAASMDNDALRGELNRLFKPHWRDR 128
>gi|167855251|ref|ZP_02478020.1| ribonuclease P [Haemophilus parasuis 29755]
gi|167853615|gb|EDS24860.1| ribonuclease P [Haemophilus parasuis 29755]
Length = 136
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + P +L L+ N R+G TV KK A +RNR++R ++E+ R
Sbjct: 27 QFKAVFELPLRASTPQLTL--LSRQNDIEHARIGLTVAKKHLKKAHDRNRIKRIVRESFR 84
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V +AK + +EL + +R+ R
Sbjct: 85 L--KQHQLPAYDFVFVAKGGIGKLSNQELFETLDKLWQRHIR 124
>gi|218708093|ref|YP_002415714.1| ribonuclease P [Vibrio splendidus LGP32]
gi|218321112|emb|CAV17062.1| Ribonuclease P protein component [Vibrio splendidus LGP32]
Length = 121
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
K+ P F++ NN+ SN PR+G V KK AV RNR +R +E+ R +
Sbjct: 26 KQAHRAGSPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFRNTQHKL 83
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
DYV+IAK+ A + +E+ + R R
Sbjct: 84 --PNKDYVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 120
>gi|198282183|ref|YP_002218504.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667338|ref|YP_002424548.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198246704|gb|ACH82297.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519551|gb|ACK80137.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 116
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
+K+G + P + L N PR+G V++K G AV RNR++RRL+EA R +
Sbjct: 25 RTLKQGRKKVFPELVIYALRNEL--PHPRLGLAVSRKVGNAVVRNRIKRRLREAFR--QQ 80
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
V G D +++A+ A + + + + + + R
Sbjct: 81 SVRTRGRDVLVVARPSARQLSMRAMGAYLQQTLERT 116
>gi|119471656|ref|ZP_01614041.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Alteromonadales bacterium TW-7]
gi|119445435|gb|EAW26722.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Alteromonadales bacterium TW-7]
Length = 141
Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P+F+L L N PR+G TV KK A +RNR++R +E+ RL +
Sbjct: 27 RAATPYFTL--LAKPNDQEKPRLGLTVAKKRVKKACQRNRIKRLARESFRLNQHNI--DN 82
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D VL+ K +EL + R+
Sbjct: 83 IDIVLMVKNGIDEQSNEELTKQLTKLWRKINER 115
>gi|262392788|ref|YP_003284642.1| ribonuclease P protein component [Vibrio sp. Ex25]
gi|262336382|gb|ACY50177.1| ribonuclease P protein component [Vibrio sp. Ex25]
Length = 107
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ N S PR+G V KK AV RNR +R +E+ R +
Sbjct: 12 QQAHRAGSPHFTIIARKNKLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 70 --PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 106
>gi|302341716|ref|YP_003806245.1| ribonuclease P protein component [Desulfarculus baarsii DSM 2075]
gi|301638329|gb|ADK83651.1| ribonuclease P protein component [Desulfarculus baarsii DSM 2075]
Length = 124
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ R QF ++ G R L V R+G TV++K AV RNR++
Sbjct: 9 PKRARLRSRGQFLQMRNGARRHRCDHFLVVWKAGPPGP-ARLGLTVSRKVAGAVGRNRVK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +E R E +L D ++I +R A F + E +
Sbjct: 68 RLAREVFRRSGE-LLPPAVDVLVIVQRGADRQDFSSVWRQLREAFGK 113
>gi|300719143|ref|YP_003743946.1| ribonuclease P protein component [Erwinia billingiae Eb661]
gi|299064979|emb|CAX62099.1| Ribonuclease P protein component [Erwinia billingiae Eb661]
Length = 108
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L NS PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 12 QQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + + L + RR+ R
Sbjct: 70 --PAMDFVIVAKKGVADLDNRALTEALEKLWRRHCR 103
>gi|227498800|ref|ZP_03928940.1| ribonuclease P [Acidaminococcus sp. D21]
gi|226904252|gb|EEH90170.1| ribonuclease P [Acidaminococcus sp. D21]
Length = 140
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+K F + KG+ + L + + ++G V KK G AV RN+++RR+
Sbjct: 36 RVKAHEDFQKIHDKGQSVVDGYGVFYFLPSPHD--HSQLGTAVGKKLGNAVLRNKIKRRM 93
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E R + LK V +A+R PF F+ ++
Sbjct: 94 RETFRQH-QYRLKKPVSIVWVARRRLAHAPFAMYETVFLRLAKKA 137
>gi|256823859|ref|YP_003147822.1| ribonuclease P protein component [Kangiella koreensis DSM 16069]
gi|256797398|gb|ACV28054.1| ribonuclease P protein component [Kangiella koreensis DSM 16069]
Length = 128
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 2 SNICILKKRRQFALV--KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
L + V P ++L + N R+G V KK AV+RN
Sbjct: 16 PTSLRLLTAEDYKRVFNNNPLKIVCPPYTLLAVPNLKD--CSRIGLIVAKKNVRNAVDRN 73
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
R++R +E+ RL + +D VL+A+ + +P K L H + R ++
Sbjct: 74 RIKRLARESFRLNQHQI--PTYDIVLLARCGSSQLPNKVLFGHLEQLWIRLQKRSSK 128
>gi|153212959|ref|ZP_01948553.1| ribonuclease P protein component [Vibrio cholerae 1587]
gi|124116185|gb|EAY35005.1| ribonuclease P protein component [Vibrio cholerae 1587]
Length = 118
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ NN S PR+G V KK AV RNR +R +E+ RL +
Sbjct: 23 QQAHSAGSPHLTIIARANNLS--HPRLGLAVPKKQIKTAVGRNRFKRVCRESFRLHQNQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +EL N + +R R
Sbjct: 81 ANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|22127983|ref|NP_671406.1| ribonuclease P [Yersinia pestis KIM 10]
gi|45443731|ref|NP_995270.1| ribonuclease P [Yersinia pestis biovar Microtus str. 91001]
gi|51598230|ref|YP_072421.1| ribonuclease P [Yersinia pseudotuberculosis IP 32953]
gi|108810135|ref|YP_654051.1| ribonuclease P [Yersinia pestis Antiqua]
gi|108814117|ref|YP_649884.1| ribonuclease P [Yersinia pestis Nepal516]
gi|145601172|ref|YP_001165248.1| ribonuclease P [Yersinia pestis Pestoides F]
gi|150260965|ref|ZP_01917693.1| ribonuclease P protein [Yersinia pestis CA88-4125]
gi|153947371|ref|YP_001403097.1| ribonuclease P [Yersinia pseudotuberculosis IP 31758]
gi|218931077|ref|YP_002348952.1| ribonuclease P [Yersinia pestis CO92]
gi|229839807|ref|ZP_04459966.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841892|ref|ZP_04462048.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. India 195]
gi|229896769|ref|ZP_04511932.1| protein C5 component of RNase P [Yersinia pestis Pestoides A]
gi|229904657|ref|ZP_04519768.1| protein C5 component of RNase P [Yersinia pestis Nepal516]
gi|21263944|sp|Q8Z9U4|RNPA_YERPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390348|sp|Q663S9|RNPA_YERPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123245361|sp|Q1C0B6|RNPA_YERPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123372802|sp|Q1CCJ6|RNPA_YERPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228261|sp|A4TSL3|RNPA_YERPP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991081|sp|A7FPB9|RNPA_YERP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21961129|gb|AAM87657.1|AE014013_2 RNase P [Yersinia pestis KIM 10]
gi|45438601|gb|AAS64147.1| ribonuclease P protein [Yersinia pestis biovar Microtus str. 91001]
gi|51591512|emb|CAH23184.1| ribonuclease P protein [Yersinia pseudotuberculosis IP 32953]
gi|108777765|gb|ABG20284.1| ribonuclease P protein component [Yersinia pestis Nepal516]
gi|108782048|gb|ABG16106.1| ribonuclease P protein component [Yersinia pestis Antiqua]
gi|115349688|emb|CAL22669.1| ribonuclease P protein [Yersinia pestis CO92]
gi|145212868|gb|ABP42275.1| ribonuclease P protein component [Yersinia pestis Pestoides F]
gi|149290373|gb|EDM40450.1| ribonuclease P protein [Yersinia pestis CA88-4125]
gi|152958866|gb|ABS46327.1| ribonuclease P protein component [Yersinia pseudotuberculosis IP
31758]
gi|229678775|gb|EEO74880.1| protein C5 component of RNase P [Yersinia pestis Nepal516]
gi|229691231|gb|EEO83284.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696173|gb|EEO86220.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700207|gb|EEO88243.1| protein C5 component of RNase P [Yersinia pestis Pestoides A]
gi|320017430|gb|ADW01002.1| protein C5 component of RNase P [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 119
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L N PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL D+V++ K+ + + L + RR+ R +
Sbjct: 66 KRLTRESFRLH--QHALPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 118
>gi|307635187|gb|ADI86222.2| RNase P protein component [Geobacter sulfurreducens KN400]
Length = 114
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R F + F VL R+G TV++K G AV RNR++R +
Sbjct: 9 RLLRRADFLRLSAAARKLHTSSFI--VLWTPGETGRRRIGITVSRKVGTAVVRNRIKRLV 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+E R + + D +IAK+ A + + +C V R
Sbjct: 67 REYYRHHRDAL--PSIDLNVIAKKGAERLDYHGVCRELDPVVERLA 110
>gi|296105490|ref|YP_003615636.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059949|gb|ADF64687.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 108
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + LR G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 AHFTFVFQQPLRAGTP-QITILGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PSMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|91228354|ref|ZP_01262282.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269965282|ref|ZP_06179403.1| ribonuclease P [Vibrio alginolyticus 40B]
gi|91188114|gb|EAS74418.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269830083|gb|EEZ84311.1| ribonuclease P [Vibrio alginolyticus 40B]
Length = 118
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NN S PR+G V KK AV RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIARNNKLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 81 --PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|166714254|ref|ZP_02245461.1| ribonuclease P [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 145
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLRRA 115
>gi|108563799|ref|YP_628115.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
gi|123073716|sp|Q1CRI1|RNPA_HELPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|107837572|gb|ABF85441.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
Length = 166
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF-------------------T 46
LK + +F V KG + FFSL VL+ + + GF +
Sbjct: 19 LKNKSEFDRVYQKGFKKHNLFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGLS 78
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E +
Sbjct: 79 VSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEML 136
>gi|313891372|ref|ZP_07824988.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
gi|313120147|gb|EFR43323.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
Length = 127
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+++ ++F + +G + V N S + R+GF TKK G AV RNR +R +
Sbjct: 20 RVRRSKEFRRIYSRGRRFSNRSALMYVFNVRRSGV--RIGFVATKKIGTAVMRNRAKRLM 77
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
KE RL L GHD +++A ++E + +
Sbjct: 78 KEVYRLH-RHELNSGHDAIMLANAFLTRATYEEAEEAILSLWHKA 121
>gi|294784387|ref|ZP_06749678.1| ribonuclease P protein component [Fusobacterium sp. 3_1_27]
gi|294487959|gb|EFG35314.1| ribonuclease P protein component [Fusobacterium sp. 3_1_27]
Length = 111
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF-NKNKLEYSRFGFVASKKVGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEG 74
+E +RL +
Sbjct: 60 FREYIRLNIDK 70
>gi|148826354|ref|YP_001291107.1| ribonuclease P [Haemophilus influenzae PittEE]
gi|148716514|gb|ABQ98724.1| ribonuclease P [Haemophilus influenzae PittEE]
Length = 194
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 12 QFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + R P ++ NN PR+G TV KK A ERNR++R ++E+ R
Sbjct: 17 QFKNVFEQPFRASTPEITILARKNNLE--HPRLGLTVAKKHLKRAHERNRIKRLVRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V +AK + + +R+ R
Sbjct: 75 LSQHRL--PAYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIR 114
>gi|227878345|ref|ZP_03996302.1| ribonuclease P [Lactobacillus crispatus JV-V01]
gi|256843833|ref|ZP_05549320.1| ribonuclease P [Lactobacillus crispatus 125-2-CHN]
gi|256849612|ref|ZP_05555044.1| ribonuclease P protein component [Lactobacillus crispatus MV-1A-US]
gi|262046280|ref|ZP_06019243.1| ribonuclease P [Lactobacillus crispatus MV-3A-US]
gi|312984009|ref|ZP_07791357.1| ribonuclease P protein component [Lactobacillus crispatus CTV-05]
gi|227862081|gb|EEJ69643.1| ribonuclease P [Lactobacillus crispatus JV-V01]
gi|256613738|gb|EEU18940.1| ribonuclease P [Lactobacillus crispatus 125-2-CHN]
gi|256713728|gb|EEU28717.1| ribonuclease P protein component [Lactobacillus crispatus MV-1A-US]
gi|260573610|gb|EEX30167.1| ribonuclease P [Lactobacillus crispatus MV-3A-US]
gi|310894511|gb|EFQ43585.1| ribonuclease P protein component [Lactobacillus crispatus CTV-05]
Length = 122
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G+ F + + N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYKVEKT-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLQINPHVDFLVITRPYARDFNMAQVRKNLLHAL 106
>gi|218885992|ref|YP_002435313.1| ribonuclease P [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756946|gb|ACL07845.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 180
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +R + KG F L VL + S R+G VT+K G AV+RNR++
Sbjct: 11 RLVRRPDYLACYDKGRRLFTKHFVLFVLFDLDRTASPEGWRLGLAVTRKTGSAVQRNRVK 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKR 88
R L+E RL ++ D +++ KR
Sbjct: 71 RVLREFFRLH-RALMPGDVDVIVVPKR 96
>gi|50123362|ref|YP_052529.1| ribonuclease P [Pectobacterium atrosepticum SCRI1043]
gi|60390380|sp|Q6CYR1|RNPA_ERWCT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49613888|emb|CAG77340.1| ribonuclease P protein component [Pectobacterium atrosepticum
SCRI1043]
Length = 119
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRMNSLGHPRIGLTVAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|255994569|ref|ZP_05427704.1| ribonuclease P protein component [Eubacterium saphenum ATCC
49989]
gi|255993282|gb|EEU03371.1| ribonuclease P protein component [Eubacterium saphenum ATCC
49989]
Length = 114
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + IL+K+ +F + KG+ + + + N R F +KK G +VERNR
Sbjct: 1 MLDKTILRKQNEFSKIYNKGKTITSEYVVVFYIKNELG--YNRRAFIASKKIGNSVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
RR ++E R ++ K DY+ +AKR
Sbjct: 59 ARRLIREFYRKNSDNF-KKSCDYIFVAKR 86
>gi|227113118|ref|ZP_03826774.1| ribonuclease P [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 119
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-HITILGRLNSLGHPRIGLTVAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|332288921|ref|YP_004419773.1| ribonuclease P [Gallibacterium anatis UMN179]
gi|330431817|gb|AEC16876.1| ribonuclease P [Gallibacterium anatis UMN179]
Length = 111
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 RQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
QF V + R P S+ N PR+G TV KK A +RNR++R +E+
Sbjct: 5 SQFNFVFQQPFRASLPEISIIARPNTLQ--HPRLGLTVAKKYVKRANQRNRIKRICRESF 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RL + L +D+++IA++ I L + +R+ R
Sbjct: 63 RL--QQHLLPDYDFIIIARKGIGDIDNALLFKMLDKLWQRHLR 103
>gi|323357958|ref|YP_004224354.1| RNase P protein component [Microbacterium testaceum StLB037]
gi|323274329|dbj|BAJ74474.1| RNase P protein component [Microbacterium testaceum StLB037]
Length = 112
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L + + V++G G V + + R GF V+K+ G AV RN
Sbjct: 2 LAKPNRLTRGSDYKATVRRGSRCAGTHAVTYV-GGVDEDGPARFGFIVSKQVGSAVTRNT 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RRRLK ++ G V+ A + + L + + ++R
Sbjct: 61 VRRRLKAVCAEALPS-VRGGASVVIRALPSSATADYASLRSDVLRCLQRKA 110
>gi|86147170|ref|ZP_01065486.1| ribonuclease P [Vibrio sp. MED222]
gi|85835054|gb|EAQ53196.1| ribonuclease P [Vibrio sp. MED222]
Length = 118
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
K+ P F++ NN+ SN PR+G V KK AV RNR +R +E+ R
Sbjct: 23 KQAHRAGSPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFR--NTQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
DYV+IAK+ A + +E+ + R R
Sbjct: 79 KLPNKDYVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 117
>gi|123444345|ref|YP_001008310.1| ribonuclease P [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|166228260|sp|A1JT84|RNPA_YERE8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122091306|emb|CAL14192.1| ribonuclease P protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 119
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L N PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNELGHPRIGLTVAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL D+V++ K+ + + L + RR+ R +
Sbjct: 66 KRLARESFRLH--QHTLPSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPA 118
>gi|260595829|ref|YP_003208400.1| ribonuclease P [Cronobacter turicensis z3032]
gi|260215006|emb|CBA26667.1| Ribonuclease P protein component [Cronobacter turicensis z3032]
Length = 119
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R +E+ RL + D+V++AKR + +EL + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PSMDFVVVAKRGIADLDNRELSEALEKLWRRHCRLVR 117
>gi|239930177|ref|ZP_04687130.1| RNase P component [Streptomyces ghanaensis ATCC 14672]
gi|291438519|ref|ZP_06577909.1| ribonuclease P protein component [Streptomyces ghanaensis ATCC
14672]
gi|291341414|gb|EFE68370.1| ribonuclease P protein component [Streptomyces ghanaensis ATCC
14672]
Length = 123
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL--------PRVGFTVTKKQG 52
+ L++R FA + R G + L + ++ R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRQHLVVHLRSGATDPHAPGESAPPSRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + L G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRERVDQ-LPPGSLVVVRALPPAGDADHAQLAQDLDAALQR 116
>gi|77361921|ref|YP_341496.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas haloplanktis TAC125]
gi|123589156|sp|Q3IK52|RNPA_PSEHT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76876832|emb|CAI88054.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Pseudoalteromonas haloplanktis TAC125]
Length = 140
Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
PFF+L L N PR+G TV KK A +RNR++R +E RL +
Sbjct: 27 RAATPFFTL--LAKPNDQDQPRLGLTVAKKRVKKACQRNRIKRLARECFRLNKHNI--DN 82
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D VL+ K +EL + R+
Sbjct: 83 IDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|256851672|ref|ZP_05557060.1| ribonuclease P protein component [Lactobacillus jensenii 27-2-CHN]
gi|260661611|ref|ZP_05862523.1| ribonuclease P protein component [Lactobacillus jensenii 115-3-CHN]
gi|282934244|ref|ZP_06339521.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|297205281|ref|ZP_06922677.1| ribonuclease P [Lactobacillus jensenii JV-V16]
gi|256615630|gb|EEU20819.1| ribonuclease P protein component [Lactobacillus jensenii 27-2-CHN]
gi|260547668|gb|EEX23646.1| ribonuclease P protein component [Lactobacillus jensenii 115-3-CHN]
gi|281301718|gb|EFA93985.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|297149859|gb|EFH30156.1| ribonuclease P [Lactobacillus jensenii JV-V16]
Length = 122
Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V KG+ F + L N RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFQTVFNKGDSVANRAFVVYKLIRP-ENKHFRVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R ++ + + V D+++I + A E+ + + +
Sbjct: 60 RLKRYIRATLTEVKDEVDVK-ADFLVITRPYARKFTMAEVKKNLIHAM 106
>gi|162450794|ref|YP_001613161.1| putative ribonuclease P protein component [Sorangium cellulosum 'So
ce 56']
gi|161161376|emb|CAN92681.1| putative ribonuclease P protein component [Sorangium cellulosum 'So
ce 56']
Length = 187
Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+ PR+G ++K G AV RNR +R L+EA R + D V+I + A +
Sbjct: 70 PSGAPRLGLVASRKVGGAVARNRAKRLLREAFRR-FPELFPERVDIVVILRTGAGSLGLD 128
Query: 97 ELCNHF---VERVRRNKRSYYSGKNFSR 121
++ V +RR + + + +R
Sbjct: 129 DVLAELRGVVPVLRRRAKEALTAASRAR 156
>gi|327539969|gb|EGF26568.1| ribonuclease P protein component [Rhodopirellula baltica WH47]
Length = 146
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 2 SNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNN----NSNLLP--------RVGFTVT 48
+ + +F +++G + + L ++ + P R+G T+
Sbjct: 13 PKSSRVVRSSEFTKALRRGGVAANDCLVVFALPHDVPDADGEPSPDKSKTVKCRLGVTIP 72
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KK G AV RNR +R ++EA RL + L G DYV+ K+D +K + FV+ V R
Sbjct: 73 KKTGNAVVRNRWKRLIREAFRLN-QSQLPGGFDYVVRPKKDV-TADWKMIEKGFVKLVGR 130
Query: 109 NKRS 112
R
Sbjct: 131 AVRR 134
>gi|222100004|ref|YP_002534572.1| Ribonuclease P protein component [Thermotoga neapolitana DSM 4359]
gi|221572394|gb|ACM23206.1| Ribonuclease P protein component [Thermotoga neapolitana DSM 4359]
Length = 185
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+ R+ F + K G+ + +F + L N R+G V +K G A RN+++R +
Sbjct: 78 RLRLRKDFLEIFKEGKSLQNEYFVVLFLKNGLD--HSRLGIVVKRKFGKATRRNKLKRWV 135
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNKR 111
+E R + + G D V+I ++ I F+ + + + R +
Sbjct: 136 RETFRKNKDK-IPKGFDIVVIPRKRLSEEFESINFRVVQKKLLSLLERIEE 185
>gi|242278538|ref|YP_002990667.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
gi|259494103|sp|C6C0J4|RNPA_DESAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|242121432|gb|ACS79128.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
Length = 124
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L ++ +F ++G+ F L VL + + R+G TV++K+G AV RNR++R L+
Sbjct: 12 LLRKPEFDLCYEQGKKLFTKSFILFVLCHGSGPSGVRLGLTVSRKKGPAVVRNRIKRVLR 71
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD 89
R+ E + + D +++ KR
Sbjct: 72 SYFRINQE-IFQVRADIIIVPKRA 94
>gi|149175832|ref|ZP_01854450.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
gi|148845279|gb|EDL59624.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
Length = 134
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ ++ F + + R G +L + N R+G +V+KK G A++R R +R L+
Sbjct: 25 RIRSQQDFDAIYAAKQRAGDQ-NLLLFAIRNELPCTRLGVSVSKKNGNAIQRARKKRLLR 83
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALF--IPFKELCNHFVERVRRNKRSYY 114
EA RL L G D + I + D +++ + ++++R
Sbjct: 84 EAFRLI-RSQLPAGLDLIAIPRADLDGDLKGYQKSLKYLSQKLKRRLEQQS 133
>gi|58338217|ref|YP_194802.1| ribonuclease P [Lactobacillus acidophilus NCFM]
gi|227902596|ref|ZP_04020401.1| ribonuclease P [Lactobacillus acidophilus ATCC 4796]
gi|67461230|sp|Q5FHQ3|RNPA_LACAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|58255534|gb|AAV43771.1| ribonuclease P [Lactobacillus acidophilus NCFM]
gi|227869685|gb|EEJ77106.1| ribonuclease P [Lactobacillus acidophilus ATCC 4796]
Length = 122
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G+ F + + N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYTVEKT-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLRINPHVDFLIITRPYARDFNMIKVRKNLLHALA 107
>gi|28896778|ref|NP_796383.1| ribonuclease P [Vibrio parahaemolyticus RIMD 2210633]
gi|153838497|ref|ZP_01991164.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|260876538|ref|ZP_05888893.1| ribonuclease P protein component [Vibrio parahaemolyticus AN-5034]
gi|260897405|ref|ZP_05905901.1| ribonuclease P protein component [Vibrio parahaemolyticus Peru-466]
gi|260901107|ref|ZP_05909502.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
gi|31340402|sp|Q87TR4|RNPA_VIBPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28804986|dbj|BAC58267.1| ribonuclease P protein component [Vibrio parahaemolyticus RIMD
2210633]
gi|149748120|gb|EDM58979.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|308087931|gb|EFO37626.1| ribonuclease P protein component [Vibrio parahaemolyticus Peru-466]
gi|308090349|gb|EFO40044.1| ribonuclease P protein component [Vibrio parahaemolyticus AN-5034]
gi|308108174|gb|EFO45714.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
Length = 118
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NN S PR+G V KK AV RNR +R +E+ R
Sbjct: 23 QQAHRAGSPHFTIIARNNKLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFR--NSQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 79 QLPNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|15603028|ref|NP_246100.1| ribonuclease P [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721511|gb|AAK03247.1| RnpA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 130
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L N+ PR+G TV KK A +RNR++R +E+ RL + D+V++AK
Sbjct: 44 LTILARPNNLAHPRLGLTVAKKHLKKAHDRNRIKRLCRESFRLAQYKL--PNCDFVIVAK 101
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + + L + +R+ R
Sbjct: 102 QGIGKLDNRTLTQTLDKLWQRHIR 125
>gi|84626028|ref|YP_453400.1| ribonuclease P [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|123520411|sp|Q2NX51|RNPA_XANOM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84369968|dbj|BAE71126.1| Ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 145
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLRRA 115
>gi|162448267|ref|YP_001621399.1| ribonuclease P [Acholeplasma laidlawii PG-8A]
gi|189043726|sp|A9NE63|RNPA_ACHLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161986374|gb|ABX82023.1| ribonuclease P [Acholeplasma laidlawii PG-8A]
Length = 116
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +K + + LV K + +F + + + + ++ KK G AVERN+
Sbjct: 1 MKRVYSIKSKNELDLVFKEKKSVGNGYFVIYFIP--HETPHFKYAISIGKKFGNAVERNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RRL+ V + + +V++ + + +P+ + + + + + K
Sbjct: 59 AKRRLRYIV-SNYSNYINPKYRFVIVVRPQSNLLPYDLIKENITKLLIKAK 108
>gi|161508220|ref|YP_001578191.1| ribonuclease P [Lactobacillus helveticus DPC 4571]
gi|260101880|ref|ZP_05752117.1| ribonuclease P protein component [Lactobacillus helveticus DSM
20075]
gi|172048192|sp|A8YTQ9|RNPA_LACH4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160349209|gb|ABX27883.1| ribonuclease P [Lactobacillus helveticus DPC 4571]
gi|260084308|gb|EEW68428.1| ribonuclease P protein component [Lactobacillus helveticus DSM
20075]
gi|323467510|gb|ADX71197.1| Ribonuclease P protein component [Lactobacillus helveticus H10]
gi|328463994|gb|EGF35492.1| ribonuclease P [Lactobacillus helveticus MTCC 5463]
Length = 122
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V + G F + + N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGNSVANRAFVIYKVEKP-ENKHFRVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVI-DEEKLEIDPQVDFLIITRPYARNFDMVKVRKNLLHALA 107
>gi|157368279|ref|YP_001476268.1| ribonuclease P [Serratia proteamaculans 568]
gi|270264117|ref|ZP_06192384.1| ribonuclease P protein component [Serratia odorifera 4Rx13]
gi|166991080|sp|A8G7Q0|RNPA_SERP5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157320043|gb|ABV39140.1| ribonuclease P protein component [Serratia proteamaculans 568]
gi|270041766|gb|EFA14863.1| ribonuclease P protein component [Serratia odorifera 4Rx13]
Length = 119
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNQLGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
D+V++AK+ + + L + RR+ R +
Sbjct: 81 --PAMDFVVVAKKGIADLDNRALTEALEKLWRRHCRQAPA 118
>gi|217966561|ref|YP_002352067.1| ribonuclease P protein component [Dictyoglomus turgidum DSM 6724]
gi|226736862|sp|B8DYS1|RNPA_DICTD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|217335660|gb|ACK41453.1| ribonuclease P protein component [Dictyoglomus turgidum DSM 6724]
Length = 119
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 2 SNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
LKK+ F + + F + + R+G +V KK G AV RN+
Sbjct: 7 PKEERLKKQEDFLRILREGKPYSLSKNFVVYIRK---GAEKRRIGISVNKKVGKAVVRNK 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRN 109
++R ++E RL LK + ++I K + F ++ ++ +
Sbjct: 64 IKRLIREVYRLHRP-YLKEDIEMLVIVKPGENIKNLDFHKVKEMLIKIWEKA 114
>gi|257061842|ref|YP_003139730.1| ribonuclease P [Cyanothece sp. PCC 8802]
gi|256592008|gb|ACV02895.1| ribonuclease P protein component [Cyanothece sp. PCC 8802]
Length = 127
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQ-GCAV 55
+ + LK ++F V +G+ + L V+ + ++ + G +V++K AV
Sbjct: 3 LPKVNRLKSPKEFQAVYQRGQRYQSDRLVLRVIWITDKTSTPEPTQFGISVSQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K A+R+ + G V+ + ++ + + + K
Sbjct: 63 VRNRLKRQIKGAIRVLLP-FITPGAKIVISVRGTLSECQYEHFLRELKKLLIKAK 116
>gi|283480421|emb|CAY76337.1| RNase P, protein component [Erwinia pyrifoliae DSM 12163]
Length = 119
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N+ PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + L + RR+ R
Sbjct: 81 --PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCR 114
>gi|227328547|ref|ZP_03832571.1| ribonuclease P [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 119
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|197300709|ref|ZP_03166178.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197291556|gb|EDY30908.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 129
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R +E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGSDS 121
>gi|229816223|ref|ZP_04446533.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
gi|229808231|gb|EEP44023.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
Length = 120
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K + F V +G+ P + + + + RV F K+ G AV RNR +R
Sbjct: 1 MQTIKSHQDFERVFTQGKRLNHPLIRMVICDCVSEGDPARVAFAAAKRLGNAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+EA R C V G + +L A +++ +RR S K+
Sbjct: 61 VLREAARACCLPV--EGREIILFATPRTRTASPEDMQVALQSLLRRAHVSTSGLKD 114
>gi|156936083|ref|YP_001439999.1| ribonuclease P [Cronobacter sakazakii ATCC BAA-894]
gi|166226718|sp|A7MN01|RNPA_ENTS8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156534337|gb|ABU79163.1| hypothetical protein ESA_03977 [Cronobacter sakazakii ATCC BAA-894]
Length = 119
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R +E+ RL + D+V++AKR + +EL + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PPMDFVVVAKRGIADLDNRELSEALEKLWRRHCRLVR 117
>gi|291556191|emb|CBL33308.1| ribonuclease P protein component, eubacterial [Eubacterium siraeum
V10Sc8a]
Length = 129
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + KKG+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYA--RESKRRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLCAE---GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR ++EA RL + +D++ +A+ + E+ +++ KR
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLWMEKQL--MKRYATPAN 121
Query: 118 NFSRK 122
N K
Sbjct: 122 NQPDK 126
>gi|289523250|ref|ZP_06440104.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503793|gb|EFD24957.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 126
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R +F L+ + R + + R+G V KKQG + RNR RR LK
Sbjct: 2 RLRRREEFDLLFREGKRARGAYVRMLYIKAPEGAGTRIGVAVGKKQGKSCVRNRGRRLLK 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
EA R LK G+ VL L +++ + RR
Sbjct: 62 EAARRLLP-WLKEGYWIVLQLSSAGLTKGARDIYFDMGDLWRR 103
>gi|332533702|ref|ZP_08409561.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036866|gb|EGI73327.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
Length = 140
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
PFF+L L N PR+G TV KK A +RNR++R +E+ RL +
Sbjct: 27 RAATPFFTL--LAKPNDQEKPRLGLTVAKKRVKKACQRNRIKRLARESFRLNQHSI--DN 82
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D VL+ K +EL + R+
Sbjct: 83 IDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|167548871|ref|ZP_02342630.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205325568|gb|EDZ13407.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 119
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLHQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|300725386|ref|YP_003714725.1| RNase P [Xenorhabdus nematophila ATCC 19061]
gi|297631942|emb|CBJ92667.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus nematophila ATCC 19061]
Length = 108
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ VL N PR+G TV KK A ERNR++R +E+ RL + D+V++ +
Sbjct: 22 ITVLGRLNELGHPRIGLTVAKKNVKRAHERNRIKRLARESFRLNQHKL--PSMDFVILVR 79
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYS 115
+ + +EL + RR+ R +
Sbjct: 80 KGVSELDNRELTEALGKLWRRHSRLVRA 107
>gi|317050196|ref|YP_004117844.1| ribonuclease P protein component [Pantoea sp. At-9b]
gi|316951813|gb|ADU71288.1| ribonuclease P protein component [Pantoea sp. At-9b]
Length = 108
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L NS PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 12 QQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 69
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + + L + RR+ R
Sbjct: 70 --PAMDFVVVAKKGVADLDNRALAEALEKLWRRHCR 103
>gi|320539852|ref|ZP_08039511.1| protein C5 component of RNase P [Serratia symbiotica str. Tucson]
gi|320030038|gb|EFW12058.1| protein C5 component of RNase P [Serratia symbiotica str. Tucson]
Length = 108
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 12 QFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + LR G P ++ N PR+G TV KK A ERNR++R +E+ R
Sbjct: 6 HFTFVFQQPLRAGTPQITILGRLNKLG--HPRIGLTVAKKHVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+ D+V++AK+ + L + RR+ R +
Sbjct: 64 QRQHEL--PAMDFVVVAKKGIADLDNCALTETLEKLWRRHCRQAPA 107
>gi|284047384|ref|YP_003397724.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
gi|283951605|gb|ADB54349.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
Length = 132
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
S L + +F V ++G L PR+G +V++K G AVERN +
Sbjct: 12 SKRGRLSRSAEFDRVFRQGRSLANRVLVLYAFPRAEEGE-PRLGVSVSRKVGGAVERNHV 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE----LCNHFVERVRRNKRSYYSG 116
+R L+EA L GHD V++A+ +A + +E + E + R +
Sbjct: 71 KRLLREAF-EQESRGLPDGHDVVVVARPEARAVAEREGLAGIQAALAELIARARERADGE 129
Query: 117 KNF 119
+
Sbjct: 130 RRR 132
>gi|149375639|ref|ZP_01893408.1| RNase P protein component [Marinobacter algicola DG893]
gi|149360041|gb|EDM48496.1| RNase P protein component [Marinobacter algicola DG893]
Length = 135
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K + V + P +L NS R+G +KK AV+RNR+
Sbjct: 7 PKSSRLLKPSDYGKVFDDVQLRVPHRHFLILATPNSLGHARIGLVFSKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+RR++E R E D V++ +R + L E R ++
Sbjct: 67 KRRVRETFRHEQEF---PALDIVVLGRRGLTELDNTALNATLTELWARLRKKNR 117
>gi|332672292|ref|YP_004455300.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
gi|332341330|gb|AEE47913.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
Length = 122
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERN 58
+ +++ F V++G + + + P VG V+K G AV RN
Sbjct: 2 LPAAHRMRRAADFEQAVRRGARSGRETLVVHLTTKTDPGPDGPVVGLVVSKAVGTAVRRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
++RRL+E VR + VL G V+ A A PF +L
Sbjct: 62 LVKRRLRELVRARLD-VLPAGSRIVVRALPPAAGAPFAQLGADL 104
>gi|253991872|ref|YP_003043228.1| ribonuclease P [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253783322|emb|CAQ86487.1| ribonuclease P protein component [Photorhabdus asymbiotica]
Length = 119
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E+ RL + D+V++ +
Sbjct: 33 ITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLARESFRLNQHSL--PPMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYS 115
+ + +EL + RR+ R +
Sbjct: 91 KGVAELDNRELTEALGKLWRRHCRLVRA 118
>gi|305681595|ref|ZP_07404401.1| ribonuclease P protein component [Corynebacterium matruchotii ATCC
14266]
gi|305658755|gb|EFM48256.1| ribonuclease P protein component [Corynebacterium matruchotii ATCC
14266]
Length = 114
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVL-NNNNSNLLPRVGFTVTKKQGCAVERN 58
+ + + +F ++ G+ G L VL + + PR G V+K G AV R+
Sbjct: 2 LPSQHKITSSEEFRKTIRSGKRAGGGTVVLHVLFSRDVLTTKPRCGLVVSKAVGNAVTRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ R+L+ +RL + L G V+ A A +EL + + + +
Sbjct: 62 AVSRKLRAIIRLLFDD-LPPGTLIVIRALPAAAHANSEELSHDVQRALAKIRER 114
>gi|242241429|ref|YP_002989610.1| ribonuclease P [Dickeya dadantii Ech703]
gi|242133486|gb|ACS87788.1| ribonuclease P protein component [Dickeya dadantii Ech703]
Length = 119
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F+ V + R G + +L N+ PR+G T+ KK A ERNR+
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGAP-QITILGRLNTLGHPRIGLTIAKKHVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL + D+V+IAK+ + + L + RR++R ++
Sbjct: 66 KRLTRESFRLHQHEL--PAMDFVVIAKKGLSELDNRTLTEMLEKLWRRHRRLAHA 118
>gi|160902080|ref|YP_001567661.1| ribonuclease P protein component [Petrotoga mobilis SJ95]
gi|189043741|sp|A9BJC4|RNPA_PETMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160359724|gb|ABX31338.1| ribonuclease P protein component [Petrotoga mobilis SJ95]
Length = 118
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+ +R F V KG F + + N R+ V +K G AV RN ++R +
Sbjct: 11 RLRLKRNFKNVFEKGGRLIDNNFVIIYVPNTMD--YNRIAVIVNRKFGNAVVRNLIKRYI 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRR 108
+E R + G+D+V I +++ I + ++ N ++ VR+
Sbjct: 69 REIYRTN-KTFFPLGYDFVFIPRKELSKNFKGIDYSQIKNQILKLVRK 115
>gi|262040468|ref|ZP_06013711.1| ribonuclease P protein component [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042221|gb|EEW43249.1| ribonuclease P protein component [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 108
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AKR + + L + RR+ R
Sbjct: 64 LRQHEL--PPMDFVVVAKRGVADLDNRALSEALEKLWRRHCR 103
>gi|323496922|ref|ZP_08101950.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
gi|323317996|gb|EGA70979.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
Length = 118
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ N+ S PR+G V KK AV RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIARKNSLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFR--NKQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + E+ F + +R R
Sbjct: 79 QLPNKDFVVIAKKSAQDLSNDEMFKLFDKLWQRLSRPSR 117
>gi|325915703|ref|ZP_08178008.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
gi|325538120|gb|EGD09811.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
Length = 159
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 25 PRSARVRTRAQYTVVFDTARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 81
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 82 IKRVLRDAMRHLLPDLA--GGDYVIVARSAAAKATNPQIRDAFVRLLRR 128
>gi|283768632|ref|ZP_06341544.1| ribonuclease P protein component [Bulleidia extructa W1219]
gi|283105024|gb|EFC06396.1| ribonuclease P protein component [Bulleidia extructa W1219]
Length = 109
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK+ +F L+ +G+ + P F R+G ++ KK G AV+RN
Sbjct: 1 MKKRNRIKKKEEFQELIHQGKKKVNPSFVFYYQKK--MEEQARMGISIPKKIGHAVQRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R+++ + +D VLI + F+E +
Sbjct: 59 YKRQIRMMLEGMIPFENYP-YDVVLIVRFAYPTKNFEENQKLLERTL 104
>gi|309811374|ref|ZP_07705161.1| ribonuclease P protein component [Dermacoccus sp. Ellin185]
gi|308434681|gb|EFP58526.1| ribonuclease P protein component [Dermacoccus sp. Ellin185]
Length = 149
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 14 ALVKKGELRKGPFFSLEVLN------NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
++ G ++ V++ + + PRVGF V+K G AV R+R +R L+
Sbjct: 18 LRDRRAGRAGGSLLAVHVIDADAFGLSPEDRVGPRVGFVVSKAVGNAVVRSRAKRVLRHV 77
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
R + G D V+ A ++ F + + R SR++
Sbjct: 78 ARDAL-SEIDPGLDIVVRANPAIAGASSHDVAREFDRMLAKATRRQRPQD-VSRET 131
>gi|289450749|ref|YP_003475563.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185296|gb|ADC91721.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 128
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ + ++KK +F+ V +KG+ S+ VL RV + V + G +V RNR
Sbjct: 1 MTKLIVIKKNYEFSRVFRKGKRYIATTLSINVLPRPR-LKYNRVAYAVGRNYGSSVRRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +EA R A G+D ++ + F+++ + + R +
Sbjct: 60 LKRLAREAYRKYA-YSCSCGYDIIITMRATESLPEFRQVADDLRVLLVRADILREQDEPR 118
Query: 120 S 120
Sbjct: 119 P 119
>gi|57167875|ref|ZP_00367015.1| ribonuclease P protein component [Campylobacter coli RM2228]
gi|305432099|ref|ZP_07401266.1| ribonuclease P protein component [Campylobacter coli JV20]
gi|57020997|gb|EAL57661.1| ribonuclease P protein component [Campylobacter coli RM2228]
gi|304445183|gb|EFM37829.1| ribonuclease P protein component [Campylobacter coli JV20]
Length = 108
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +F+ V K G+ + L N+ + +KK G AV RNR
Sbjct: 1 MKTFGKFSENEEFSAVYKTGKKWYCDGIIIFYLKNDEQKMA----VVASKKVGKAVIRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ E L++G Y+ +AK + PF L + +++
Sbjct: 57 SKRILRALF-TQFENKLQNGK-YIFVAKSEITQFPFSRLEKNLKWGLKK 103
>gi|188535564|ref|YP_001909361.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|292490138|ref|YP_003533033.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|292901142|ref|YP_003540511.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|238689718|sp|B2VCE5|RNPA_ERWT9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188030606|emb|CAO98501.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|291200990|emb|CBJ48129.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|291555580|emb|CBA24177.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|312174331|emb|CBX82584.1| RNase P, protein component [Erwinia amylovora ATCC BAA-2158]
Length = 119
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N+ PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + L + RR+ R
Sbjct: 81 --PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCR 114
>gi|184202002|ref|YP_001856209.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
gi|238689215|sp|B2GJF5|RNPA_KOCRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183582232|dbj|BAG30703.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
Length = 113
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ F+ V+ G + V ++ RVGF V+K G AV RN+
Sbjct: 2 LPTRHRMRTSAHFSTTVRSGARGGRRNVVVSV--RLSTGAPSRVGFVVSKAVGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++RRL+E G D V+ A A P+ EL + V R
Sbjct: 60 VKRRLRELSAETVRER-PEGMDLVVRALPPAATAPWDELARDYRSAVATAVRR 111
>gi|109900612|ref|YP_663867.1| ribonuclease P protein component [Pseudoalteromonas atlantica T6c]
gi|122971412|sp|Q15MS5|RNPA_PSEA6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|109702893|gb|ABG42813.1| ribonuclease P protein component [Pseudoalteromonas atlantica T6c]
Length = 120
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N + PR+G TV KK A +RNR++R ++E+ R + + D V++ K
Sbjct: 33 LTLLARHNDSPNPRLGITVAKKRVKKAHDRNRIKRIVRESFRNHQQSL--PNIDIVVVGK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRS 112
+ +EL + ++ +
Sbjct: 91 SGLDKLSNQELFLVLSKLWKKLAKR 115
>gi|86610361|ref|YP_479123.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500626|sp|Q2JHS3|RNPA_SYNJB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|86558903|gb|ABD03860.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 133
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPF---FSLEVLNNNNSNLLPRVGFTVTKKQGC-AVE 56
+ L+ RR F + +G R+ + + + +VG + +K AV+
Sbjct: 2 LPAPHRLRDRRAFQALYQGGQRRSGAGLTLLFQPMPAGCEGIPSQVGLVIGRKVSKSAVK 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR+RR+L+E +R LK G+ + I+K + L + EL +++
Sbjct: 62 RNRLRRQLREILRPLCPN-LKPGYRLLFISKANLLTYRWPELRAEVHRLLQKA 113
>gi|261868620|ref|YP_003256542.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293391844|ref|ZP_06636178.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261413952|gb|ACX83323.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290952378|gb|EFE02497.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 111
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L N PR+G TV KK A +RNR++R +E+ R
Sbjct: 5 EHFKYVFQQPSRAGSP-EITILARQNHLEHPRLGLTVAKKHLKRAHDRNRIKRLCRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V++AK+ + + L + +R+ R
Sbjct: 64 LAQHDL--PNYDFVIVAKQGIGVLNNRTLWQTLDKLWQRHIR 103
>gi|103491962|gb|ABF71982.1| ribonuclease P protein component [Persephonella marina]
Length = 117
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRR 62
+ LK R +++ KG F + NN+ PR F +++K AV RNR +R
Sbjct: 1 MITLKDREIKSILSKGRSLHTENFIVIYRNNDLG--YPRFAFILSRKFSKKAVVRNRAKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+KEA+R + +D + IAK++ + ++L + +
Sbjct: 59 IIKEALRAYYGSLKNLSYDIIFIAKKNIIGKKTQDLYRDMEKLI 102
>gi|323143416|ref|ZP_08078101.1| ribonuclease P protein component [Succinatimonas hippei YIT 12066]
gi|322416821|gb|EFY07470.1| ribonuclease P protein component [Succinatimonas hippei YIT 12066]
Length = 121
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L R F V K +R + VL NN+ PR+G ++KK AV RNR+
Sbjct: 7 PRELRLLNSRDFDQVFKNPVRASAQ-GMLVLAKNNNLDKPRLGLVISKKVLKRAVWRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R ++E R + + K D V IA+ I EL + R
Sbjct: 66 KRIVRETFRNSQDNLPKA--DLVFIARPKIGDISNSELSSTLQRLWNHVSRR 115
>gi|171741735|ref|ZP_02917542.1| hypothetical protein BIFDEN_00826 [Bifidobacterium dentium ATCC
27678]
gi|283457087|ref|YP_003361651.1| ribonuclease P protein component [Bifidobacterium dentium Bd1]
gi|306823998|ref|ZP_07457372.1| ribonuclease P protein component [Bifidobacterium dentium ATCC
27679]
gi|309801953|ref|ZP_07696067.1| ribonuclease P protein component [Bifidobacterium dentium
JCVIHMP022]
gi|171277349|gb|EDT45010.1| hypothetical protein BIFDEN_00826 [Bifidobacterium dentium ATCC
27678]
gi|283103721|gb|ADB10827.1| RnpA Ribonuclease P protein component [Bifidobacterium dentium Bd1]
gi|304552996|gb|EFM40909.1| ribonuclease P protein component [Bifidobacterium dentium ATCC
27679]
gi|308221401|gb|EFO77699.1| ribonuclease P protein component [Bifidobacterium dentium
JCVIHMP022]
Length = 120
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 9/117 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNS--------NLLPRVGFTVTKKQGCAV 55
+ LK R F V K R + ++ RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYAMHDDVFISDSTARSGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR + R E +L D VL AK A F L + R
Sbjct: 61 TRNTVKRRFRVLARKH-EFLLPESCDIVLRAKPSAAHADFSSLDHQMAACFEAISRK 116
>gi|115252809|emb|CAK98245.1| putative ribonuclease p protein component [Spiroplasma citri]
Length = 109
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 6 ILKKRRQFALVKKGELR--KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I+KK +F + P+F + N R G +V KK G AV RN+++R+
Sbjct: 10 IVKKNYEFQKIINNRFFIKTNPYF---IYFKRNDLNYHRFGISVGKKLGNAVVRNKVKRQ 66
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++ L + +D ++I ++ + +++++
Sbjct: 67 IR--SMLNFDFSATESYDQIIIVRKSYFSNSYLINKEILLKQIK 108
>gi|311741701|ref|ZP_07715523.1| ribonuclease P protein component [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303222|gb|EFQ79303.1| ribonuclease P protein component [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 120
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERN 58
L QF KG R G + +N ++ PR G V+K G AV R+
Sbjct: 8 LTSPTQFRRTMKGSRRAGTRTVVVHARDNAGTDKAADIAATGPRFGLIVSKAVGNAVVRH 67
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R RRL+ L D V+ A + ++L + +R+
Sbjct: 68 RTSRRLRHVCMTFIPK-LPASVDVVIRALPASATASSEQLEKDLAKALRKQ 117
>gi|289662286|ref|ZP_06483867.1| ribonuclease P [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 145
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDPLLSLHWR---IGDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|218248783|ref|YP_002374154.1| ribonuclease P [Cyanothece sp. PCC 8801]
gi|226736858|sp|B7K5U5|RNPA_CYAP8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218169261|gb|ACK67998.1| ribonuclease P protein component [Cyanothece sp. PCC 8801]
Length = 127
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQ-GCAV 55
+ + LK R+F V +G+ + L VL + ++ + G +++K AV
Sbjct: 3 LPKLNRLKSPREFQAVYQRGQRYQSDRLVLRVLWITDKTSNPAPTQFGIAISQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K A+R+ + G V+ + + ++ + + + K
Sbjct: 63 VRNRLKRQIKGAIRVLLPFIA-PGAKIVISVRGNVSECQYEHFLRELKKLLIKAK 116
>gi|89092262|ref|ZP_01165216.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
gi|89083350|gb|EAR62568.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
Length = 123
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L R F V K P L +L N+ PR+GF ++KK AV+RNR+
Sbjct: 7 PRRLRLLTGRDFQFVFDDAQLKVPDQPLLILARPNNLGQPRLGFVISKKNVRQAVKRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
RR ++E+ RL + D +++A++ + + + + R K K
Sbjct: 67 RRIIRESFRLNQHSL--PSVDIIILARKGIGEMENEAIHKLMKKSWSRLKNKSKKLKQ 122
>gi|256846680|ref|ZP_05552136.1| ribonuclease P [Fusobacterium sp. 3_1_36A2]
gi|256717900|gb|EEU31457.1| ribonuclease P [Fusobacterium sp. 3_1_36A2]
Length = 111
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +K+ G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF-NKNKLEYSRFGFVASKRVGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEG 74
+E +RL +
Sbjct: 60 FREYIRLNIDK 70
>gi|260912767|ref|ZP_05919253.1| ribonuclease P protein component [Pasteurella dagmatis ATCC 43325]
gi|260633145|gb|EEX51310.1| ribonuclease P protein component [Pasteurella dagmatis ATCC 43325]
Length = 122
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G TV KK A +RNR++R +E+ RL + +D+V++AK
Sbjct: 33 ITILARPNQLGHPRLGLTVAKKHLKRAHDRNRIKRLCRESFRLAQHKL--PHYDFVIVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + L + +R+ R
Sbjct: 91 QGIGKLENNALTQTLDKLWQRHIR 114
>gi|298246127|ref|ZP_06969933.1| ribonuclease P protein component [Ktedonobacter racemifer DSM
44963]
gi|297553608|gb|EFH87473.1| ribonuclease P protein component [Ktedonobacter racemifer DSM
44963]
Length = 152
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 12/105 (11%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLP---------RVGFTVTKK 50
+ L+K F V++ L + S+L RVGF V+K+
Sbjct: 3 LRRAQRLRKNGDFQRVRQQRQSVSSRLLILAWSPHPKSDLESHLEPNVAITRVGFVVSKR 62
Query: 51 Q-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
A RN ++R L EAVR + G+D VL A+ +
Sbjct: 63 ISKNATIRNTIKRLLSEAVRSLWHE-IPPGYDLVLTARHQLVGTD 106
>gi|281412768|ref|YP_003346847.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
gi|281373871|gb|ADA67433.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
Length = 117
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+GE + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGESLQNEYFVVLFRKNGLD--YSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
G D V+I ++ + F + + ++R
Sbjct: 79 PKGFDIVVIPRKKLSEEFEQVDFWAVHEKLLNLLKR 114
>gi|315128188|ref|YP_004070191.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas sp. SM9913]
gi|315016701|gb|ADT70039.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas sp. SM9913]
Length = 141
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
PFF+L L + PR+G TV KK A +RNR++R +E+ RL
Sbjct: 27 RAATPFFTL--LAKPSDQSKPRLGLTVAKKRVKKACQRNRIKRLARESFRLN--QHTLDN 82
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D VL+ K +EL + R+
Sbjct: 83 IDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|284007061|emb|CBA72336.1| ribonuclease P protein component [Arsenophonus nasoniae]
Length = 117
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E RL + D+V++ +
Sbjct: 31 ITILGRLNELGYPRIGLTIAKKNVKRAHERNRIKRLTREYFRLHQHEL--PSMDFVILVR 88
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +E+ + RR+ R
Sbjct: 89 KGVADLNNQEITETLGKLWRRHCR 112
>gi|37528714|ref|NP_932059.1| ribonuclease P [Photorhabdus luminescens subsp. laumondii TTO1]
gi|48474338|sp|Q7M7H7|RNPA_PHOLL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|36788153|emb|CAE17280.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E+ RL + D+V++ +
Sbjct: 33 ITILGRPNELGHPRIGLTIAKKNVKRAHERNRIKRLARESFRLNQHEL--PPMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYS 115
+ + + L + RR+ R +
Sbjct: 91 KGVAELDNRALTEALGKLWRRHCRLARA 118
>gi|197286948|ref|YP_002152820.1| ribonuclease P [Proteus mirabilis HI4320]
gi|227354812|ref|ZP_03839229.1| ribonuclease P protein component [Proteus mirabilis ATCC 29906]
gi|133182|sp|P22835|RNPA_PROMI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690076|sp|B4F0U3|RNPA_PROMH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150876|gb|AAA83956.1| RNaseP C5 subunit [Proteus mirabilis]
gi|194684435|emb|CAR46148.1| ribonuclease P protein component [Proteus mirabilis HI4320]
gi|227165130|gb|EEI49961.1| ribonuclease P protein component [Proteus mirabilis ATCC 29906]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L N PR+G T+ KK A ERNR++R +E RL + D+V++ ++
Sbjct: 35 ILGRQNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHQL--PAMDFVVLVRKG 92
Query: 90 ALFIPFKELCNHFVERVRRNKR 111
+ +L + RR+ R
Sbjct: 93 VAELDNHQLTEVLGKLWRRHCR 114
>gi|323493775|ref|ZP_08098893.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
gi|323311909|gb|EGA65055.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
Length = 118
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ N+ S PR+G V KK AV RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIARKNSLS--HPRLGLAVPKKQIKTAVGRNRFKRLARESFRNNQHQL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + +R R
Sbjct: 81 ANK--DFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|312623588|ref|YP_004025201.1| ribonuclease p protein component [Caldicellulosiruptor
kronotskyensis 2002]
gi|312204055|gb|ADQ47382.1| ribonuclease P protein component [Caldicellulosiruptor
kronotskyensis 2002]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +K+G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFYSLKKNDEFEACIKRGRFAVQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWI-LENMDKIKQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|29830857|ref|NP_825491.1| RNase P component [Streptomyces avermitilis MA-4680]
gi|48474383|sp|Q82FE0|RNPA_STRAW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29607970|dbj|BAC72026.1| putative RNase P component [Streptomyces avermitilis MA-4680]
Length = 123
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R +L G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRVA-LLPPGSLVVVRALPGAGDADHAQLAQDLDAALQR 116
>gi|166154126|ref|YP_001654244.1| ribonuclease P [Chlamydia trachomatis 434/Bu]
gi|166155001|ref|YP_001653256.1| ribonuclease P [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335365|ref|ZP_07223609.1| ribonuclease P [Chlamydia trachomatis L2tet1]
gi|226741386|sp|B0BAN9|RNPA_CHLTB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687428|sp|B0B910|RNPA_CHLT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|165930114|emb|CAP03597.1| ribonuclease P protein component [Chlamydia trachomatis 434/Bu]
gi|165930989|emb|CAP06551.1| ribonuclease P protein component [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 120
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSN-TSKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|289667651|ref|ZP_06488726.1| ribonuclease P [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 145
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDPLLSLHWR---IGDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|256827815|ref|YP_003151774.1| ribonuclease P protein component [Cryptobacterium curtum DSM 15641]
gi|256583958|gb|ACU95092.1| ribonuclease P protein component [Cryptobacterium curtum DSM 15641]
Length = 112
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNS-NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
L +G +L + ++ + + RV F KK G AV RN +RR++
Sbjct: 12 LLFSQGTRFSTSCITLLAIQVDDQHDPVGRVAFIAGKKLGNAVWRNMAKRRMRSICHELG 71
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
G+ V +AK + + ++ + + +RR
Sbjct: 72 GPW--DGYHIVFLAKASLMNQEYSKVLHACQKLLRRM 106
>gi|329297779|ref|ZP_08255115.1| ribonuclease P [Plautia stali symbiont]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + LR G + +L NS PR+G T+ KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPLRAGTP-QITILGRLNSLGHPRIGLTIAKKHVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PPMDFVIVAKKGIADLDNRALTEALEKLWRRHCR 114
>gi|183597174|ref|ZP_02958667.1| hypothetical protein PROSTU_00417 [Providencia stuartii ATCC 25827]
gi|188023488|gb|EDU61528.1| hypothetical protein PROSTU_00417 [Providencia stuartii ATCC 25827]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E RL + D+V++ +
Sbjct: 33 ITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PPMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +++ + RR+ R
Sbjct: 91 KGVANLDNQQITETLGKLWRRHCR 114
>gi|219871957|ref|YP_002476332.1| ribonuclease P [Haemophilus parasuis SH0165]
gi|219692161|gb|ACL33384.1| ribonuclease P [Haemophilus parasuis SH0165]
Length = 136
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + P +L L+ N R+G TV KK A +RNR++R ++E+ R
Sbjct: 27 QFKAVFELPLRASTPQLTL--LSRQNDIEHARIGLTVAKKHLKRAHDRNRIKRIVRESFR 84
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V +AK + +EL + +R+ R
Sbjct: 85 L--KQHQLPAYDFVFVAKGGIGKLSNQELFETLDKLWQRHIR 124
>gi|46397713|sp|Q7X5K8|RNPA_THESC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908464|gb|AAO88975.1| RNase P protein subunit [Thermus scotoductus]
Length = 162
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F +++G + +G F +++ L + RVG V+KK G AV RNR++
Sbjct: 60 KLLSLKGDRAFQRLRQGRMGRGRFLNVKWLPASE----LRVGIVVSKKVGKAVVRNRIK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + ++IA +A + EL + ++++
Sbjct: 115 ---RRLREILRRLHLPKAHLLVIASPEAREATYAELFQDLIRALKKS 158
>gi|325577777|ref|ZP_08148052.1| ribonuclease P protein component [Haemophilus parainfluenzae ATCC
33392]
gi|325160522|gb|EGC72648.1| ribonuclease P protein component [Haemophilus parainfluenzae ATCC
33392]
Length = 111
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 22 ITILARKNNLEHPRLGLTVAKKHLKRAHDRNRIKRLVRESFRLSQHNL--PSCDFVFVAK 79
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
R + + + R+ R
Sbjct: 80 RGIGQLDNQTFLQTLDKLWARHIR 103
>gi|227502239|ref|ZP_03932288.1| ribonuclease P [Corynebacterium accolens ATCC 49725]
gi|227077063|gb|EEI15026.1| ribonuclease P [Corynebacterium accolens ATCC 49725]
Length = 126
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 7 LKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNL-------------LPRVGFTVTKKQG 52
L QF KG R+G + + ++N PR G V+K G
Sbjct: 8 LTSPPQFRRTMKGSRRQGTRTVVVHARDTMSANSNGTMDNPAEVAATGPRFGLIVSKAVG 67
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R+R RRL+ L G D V+ A + ++L + +R+
Sbjct: 68 NAVVRHRTSRRLRHVCMTLIPK-LPAGVDVVIRALPASATATSEQLEKDITKALRKQ 123
>gi|206576561|ref|YP_002241309.1| ribonuclease P protein component [Klebsiella pneumoniae 342]
gi|238897215|ref|YP_002921963.1| ribonuclease P [Klebsiella pneumoniae NTUH-K2044]
gi|290511688|ref|ZP_06551056.1| ribonuclease P [Klebsiella sp. 1_1_55]
gi|330005211|ref|ZP_08305170.1| ribonuclease P protein component [Klebsiella sp. MS 92-3]
gi|226741391|sp|B5XZP6|RNPA_KLEP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206565619|gb|ACI07395.1| ribonuclease P protein component [Klebsiella pneumoniae 342]
gi|238549545|dbj|BAH65896.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|289775478|gb|EFD83478.1| ribonuclease P [Klebsiella sp. 1_1_55]
gi|328536343|gb|EGF62705.1| ribonuclease P protein component [Klebsiella sp. MS 92-3]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AKR + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PPMDFVVVAKRGVADLDNRALSEALEKLWRRHCR 114
>gi|119773153|ref|YP_925893.1| ribonuclease P [Shewanella amazonensis SB2B]
gi|166226738|sp|A1S1G7|RNPA_SHEAM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119765653|gb|ABL98223.1| ribonuclease P protein component [Shewanella amazonensis SB2B]
Length = 118
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N+ PRVG TV KK A +RNR++R ++E+ R
Sbjct: 16 AQFQAVFTNPVKASSA-EITLLATPNTQEHPRVGLTVPKKQVKRAHDRNRVKRVIRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ + D V++ ++ + + EL + R+ R
Sbjct: 75 MHQHDL--PSLDIVVLVRKGVMDLENPELHKLVDKLWRKLSRR 115
>gi|329121493|ref|ZP_08250117.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
gi|327469408|gb|EGF14878.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
Length = 84
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+GF TKK G AV RNR +R +KE RL LK GHD +++A ++E
Sbjct: 12 RIGFVATKKIGTAVMRNRAKRLMKEVYRLH-RHELKSGHDAIMLANAFLTRATYEEAEEA 70
Query: 102 FVERVRRN 109
+ +
Sbjct: 71 ILSLWHKA 78
>gi|312948271|gb|ADR29098.1| ribonuclease P [Escherichia coli O83:H1 str. NRG 857C]
Length = 108
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRQAR 106
>gi|84394510|ref|ZP_00993220.1| ribonuclease P [Vibrio splendidus 12B01]
gi|148982292|ref|ZP_01816699.1| ribonuclease P [Vibrionales bacterium SWAT-3]
gi|84374863|gb|EAP91800.1| ribonuclease P [Vibrio splendidus 12B01]
gi|145960557|gb|EDK25914.1| ribonuclease P [Vibrionales bacterium SWAT-3]
Length = 118
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
K+ P F++ NN+ SN PR+G V KK AV RNR +R +E+ R
Sbjct: 23 KQAHRAGSPHFTIIARNNSLSN--PRLGLAVPKKQIKTAVGRNRFKRLTRESFR--NTQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ + R R
Sbjct: 79 KLPNKDFVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 117
>gi|332638154|ref|ZP_08417017.1| ribonuclease P [Weissella cibaria KACC 11862]
Length = 118
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +KK F LV + F + + R+G +V+KK G ER
Sbjct: 1 MRKSYRVKKEADFQLVFEQHHSVANKMFIVYTMEREQPTHF-RLGISVSKKVGLRGHERV 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V L + L+ D ++IA+ A + + +
Sbjct: 60 WVKRRIRQSV-LELKPNLRQDVDILVIARPSAHDQDMAIIKKNLEHVFK 107
>gi|315634813|ref|ZP_07890095.1| ribonuclease P protein component [Aggregatibacter segnis ATCC
33393]
gi|315476365|gb|EFU67115.1| ribonuclease P protein component [Aggregatibacter segnis ATCC
33393]
Length = 111
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V ++ P ++ N+ PR+G TV KK A +RNR++R +E+
Sbjct: 5 EHFKYVFQQPSRASSPEITILARKNHLE--HPRLGLTVAKKHLKRAHDRNRIKRLCRESF 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RL + +D+V++AK+ + + L + +R+ R
Sbjct: 63 RLAQHDL--PNYDFVVVAKQGIGRLDNRTLWQTLDKLWQRHIR 103
>gi|78050042|ref|YP_366217.1| ribonuclease P [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|294627439|ref|ZP_06706023.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|123583681|sp|Q3BLZ6|RNPA_XANC5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78038472|emb|CAJ26217.1| ribonuclease P, protein component [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598260|gb|EFF42413.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 145
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|300780160|ref|ZP_07090016.1| ribonuclease P [Corynebacterium genitalium ATCC 33030]
gi|300534270|gb|EFK55329.1| ribonuclease P [Corynebacterium genitalium ATCC 33030]
Length = 122
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNS--NLLPRVGFTVTKKQGCAVER 57
+ L F V +KG + + PR G V+K+ G AV R
Sbjct: 2 LPRAHKLASSADFRTVMRKGGRAGTRTVVVHYYTRTDPVITGGPRFGLVVSKQVGNAVTR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ + RRL+ + L D V+ A A K+L + + R + G+
Sbjct: 62 HSVSRRLRHVLA-GFISELPREVDIVVRALPPAAEATSKQLLDDVSSALPRAHKKSKRGR 120
>gi|254391430|ref|ZP_05006632.1| ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|294813738|ref|ZP_06772381.1| Ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|326442159|ref|ZP_08216893.1| RNase P component [Streptomyces clavuligerus ATCC 27064]
gi|197705119|gb|EDY50931.1| ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|294326337|gb|EFG07980.1| Ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
Length = 123
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPR-------VGFTVTKKQG 52
+ L++R FA + R G P + + + + P GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGSPDPHAPGESAPPTCAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R L G V+ A A ++L ++R
Sbjct: 62 GAVVRNQVKRRLRHLIRDRLAA-LPPGSLVVVRALPGAGDADHQQLAQDLDAALQR 116
>gi|304398070|ref|ZP_07379945.1| ribonuclease P protein component [Pantoea sp. aB]
gi|308188767|ref|YP_003932898.1| RNase P, protein component [Pantoea vagans C9-1]
gi|304354356|gb|EFM18728.1| ribonuclease P protein component [Pantoea sp. aB]
gi|308059277|gb|ADO11449.1| RNase P, protein component [Pantoea vagans C9-1]
Length = 119
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N+ PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + + L + RR+ R
Sbjct: 81 --PSMDFVVVAKKGVADLDNRMLAEALEKLWRRHCR 114
>gi|189218936|ref|YP_001939577.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
gi|189185794|gb|ACD82979.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
Length = 145
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
KK+ KG+ FF L +L+ + P+V F V+KK A +RN ++RR++E
Sbjct: 38 KKKEIALFFSKGKKFSSSFFILFLLSTEYQS-FPKVFFAVSKKVNRACQRNLIKRRMREI 96
Query: 68 VRLCAEGVLKH---GHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L G IAK AL PF+EL ++ +
Sbjct: 97 FRQHPFFKLSPFAFGW----IAKEKALKAPFEELKTDMIKLGEKA 137
>gi|237729026|ref|ZP_04559507.1| ribonuclease P protein component [Citrobacter sp. 30_2]
gi|226909648|gb|EEH95566.1| ribonuclease P protein component [Citrobacter sp. 30_2]
Length = 119
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L NS PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + + L + RR+ R
Sbjct: 81 --PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|110644047|ref|YP_671777.1| ribonuclease P protein component [Escherichia coli 536]
gi|110807606|ref|YP_691126.1| ribonuclease P [Shigella flexneri 5 str. 8401]
gi|227883926|ref|ZP_04001731.1| ribonuclease P protein component [Escherichia coli 83972]
gi|253775662|ref|YP_003038493.1| ribonuclease P [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|256021278|ref|ZP_05435143.1| ribonuclease P [Shigella sp. D9]
gi|256025565|ref|ZP_05439430.1| ribonuclease P [Escherichia sp. 4_1_40B]
gi|297521628|ref|ZP_06940014.1| ribonuclease P [Escherichia coli OP50]
gi|300815049|ref|ZP_07095274.1| ribonuclease P protein component [Escherichia coli MS 107-1]
gi|300824311|ref|ZP_07104427.1| ribonuclease P protein component [Escherichia coli MS 119-7]
gi|300896033|ref|ZP_07114594.1| ribonuclease P protein component [Escherichia coli MS 198-1]
gi|300903020|ref|ZP_07120962.1| ribonuclease P protein component [Escherichia coli MS 84-1]
gi|300917466|ref|ZP_07134126.1| ribonuclease P protein component [Escherichia coli MS 115-1]
gi|300925528|ref|ZP_07141403.1| ribonuclease P protein component [Escherichia coli MS 182-1]
gi|300932336|ref|ZP_07147604.1| ribonuclease P protein component [Escherichia coli MS 187-1]
gi|300940890|ref|ZP_07155417.1| ribonuclease P protein component [Escherichia coli MS 21-1]
gi|300947534|ref|ZP_07161711.1| ribonuclease P protein component [Escherichia coli MS 116-1]
gi|300956290|ref|ZP_07168592.1| ribonuclease P protein component [Escherichia coli MS 175-1]
gi|300983656|ref|ZP_07176697.1| ribonuclease P protein component [Escherichia coli MS 200-1]
gi|300984537|ref|ZP_07177027.1| ribonuclease P protein component [Escherichia coli MS 45-1]
gi|301020906|ref|ZP_07184961.1| ribonuclease P protein component [Escherichia coli MS 69-1]
gi|301028498|ref|ZP_07191738.1| ribonuclease P protein component [Escherichia coli MS 196-1]
gi|301047523|ref|ZP_07194599.1| ribonuclease P protein component [Escherichia coli MS 185-1]
gi|301305949|ref|ZP_07212031.1| ribonuclease P protein component [Escherichia coli MS 124-1]
gi|301325004|ref|ZP_07218554.1| ribonuclease P protein component [Escherichia coli MS 78-1]
gi|301644376|ref|ZP_07244377.1| ribonuclease P protein component [Escherichia coli MS 146-1]
gi|306815943|ref|ZP_07450081.1| ribonuclease P [Escherichia coli NC101]
gi|307140404|ref|ZP_07499760.1| ribonuclease P [Escherichia coli H736]
gi|307313227|ref|ZP_07592852.1| ribonuclease P protein component [Escherichia coli W]
gi|309795747|ref|ZP_07690162.1| ribonuclease P protein component [Escherichia coli MS 145-7]
gi|312967886|ref|ZP_07782098.1| ribonuclease P protein component [Escherichia coli 2362-75]
gi|312972004|ref|ZP_07786178.1| ribonuclease P protein component [Escherichia coli 1827-70]
gi|110345639|gb|ABG71876.1| ribonuclease P protein component [Escherichia coli 536]
gi|110617154|gb|ABF05821.1| ribonuclease P [Shigella flexneri 5 str. 8401]
gi|227839204|gb|EEJ49670.1| ribonuclease P protein component [Escherichia coli 83972]
gi|253326706|gb|ACT31308.1| ribonuclease P protein component [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260451438|gb|ACX41860.1| ribonuclease P protein component [Escherichia coli DH1]
gi|299878460|gb|EFI86671.1| ribonuclease P protein component [Escherichia coli MS 196-1]
gi|300300583|gb|EFJ56968.1| ribonuclease P protein component [Escherichia coli MS 185-1]
gi|300306879|gb|EFJ61399.1| ribonuclease P protein component [Escherichia coli MS 200-1]
gi|300316877|gb|EFJ66661.1| ribonuclease P protein component [Escherichia coli MS 175-1]
gi|300360093|gb|EFJ75963.1| ribonuclease P protein component [Escherichia coli MS 198-1]
gi|300398373|gb|EFJ81911.1| ribonuclease P protein component [Escherichia coli MS 69-1]
gi|300404926|gb|EFJ88464.1| ribonuclease P protein component [Escherichia coli MS 84-1]
gi|300408370|gb|EFJ91908.1| ribonuclease P protein component [Escherichia coli MS 45-1]
gi|300415270|gb|EFJ98580.1| ribonuclease P protein component [Escherichia coli MS 115-1]
gi|300418368|gb|EFK01679.1| ribonuclease P protein component [Escherichia coli MS 182-1]
gi|300452871|gb|EFK16491.1| ribonuclease P protein component [Escherichia coli MS 116-1]
gi|300454371|gb|EFK17864.1| ribonuclease P protein component [Escherichia coli MS 21-1]
gi|300459922|gb|EFK23415.1| ribonuclease P protein component [Escherichia coli MS 187-1]
gi|300523198|gb|EFK44267.1| ribonuclease P protein component [Escherichia coli MS 119-7]
gi|300531941|gb|EFK53003.1| ribonuclease P protein component [Escherichia coli MS 107-1]
gi|300838800|gb|EFK66560.1| ribonuclease P protein component [Escherichia coli MS 124-1]
gi|300848098|gb|EFK75858.1| ribonuclease P protein component [Escherichia coli MS 78-1]
gi|301077317|gb|EFK92123.1| ribonuclease P protein component [Escherichia coli MS 146-1]
gi|305850339|gb|EFM50796.1| ribonuclease P [Escherichia coli NC101]
gi|306906910|gb|EFN37419.1| ribonuclease P protein component [Escherichia coli W]
gi|307555844|gb|ADN48619.1| ribonuclease P protein component [Escherichia coli ABU 83972]
gi|307628780|gb|ADN73084.1| ribonuclease P [Escherichia coli UM146]
gi|308120626|gb|EFO57888.1| ribonuclease P protein component [Escherichia coli MS 145-7]
gi|310334381|gb|EFQ00586.1| ribonuclease P protein component [Escherichia coli 1827-70]
gi|312287447|gb|EFR15355.1| ribonuclease P protein component [Escherichia coli 2362-75]
gi|313647712|gb|EFS12160.1| ribonuclease P protein component [Shigella flexneri 2a str. 2457T]
gi|315063010|gb|ADT77337.1| protein C5 component of RNase P [Escherichia coli W]
gi|315254608|gb|EFU34576.1| ribonuclease P protein component [Escherichia coli MS 85-1]
gi|315285490|gb|EFU44935.1| ribonuclease P protein component [Escherichia coli MS 110-3]
gi|315292863|gb|EFU52215.1| ribonuclease P protein component [Escherichia coli MS 153-1]
gi|315296903|gb|EFU56191.1| ribonuclease P protein component [Escherichia coli MS 16-3]
gi|315618590|gb|EFU99176.1| ribonuclease P protein component [Escherichia coli 3431]
gi|320174822|gb|EFW49945.1| Ribonuclease P protein component [Shigella dysenteriae CDC 74-1112]
gi|320180046|gb|EFW54988.1| Ribonuclease P protein component [Shigella boydii ATCC 9905]
gi|320185531|gb|EFW60297.1| Ribonuclease P protein component [Shigella flexneri CDC 796-83]
gi|320193749|gb|EFW68382.1| Ribonuclease P protein component [Escherichia coli WV_060327]
gi|320201268|gb|EFW75849.1| Ribonuclease P protein component [Escherichia coli EC4100B]
gi|320644872|gb|EFX13908.1| ribonuclease P [Escherichia coli O157:H- str. 493-89]
gi|320650136|gb|EFX18632.1| ribonuclease P [Escherichia coli O157:H- str. H 2687]
gi|320655484|gb|EFX23419.1| ribonuclease P [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320661110|gb|EFX28546.1| ribonuclease P [Escherichia coli O55:H7 str. USDA 5905]
gi|320666236|gb|EFX33242.1| ribonuclease P [Escherichia coli O157:H7 str. LSU-61]
gi|323161044|gb|EFZ46963.1| ribonuclease P protein component [Escherichia coli E128010]
gi|323177716|gb|EFZ63300.1| ribonuclease P protein component [Escherichia coli 1180]
gi|324008041|gb|EGB77260.1| ribonuclease P protein component [Escherichia coli MS 57-2]
gi|324012734|gb|EGB81953.1| ribonuclease P protein component [Escherichia coli MS 60-1]
gi|324018427|gb|EGB87646.1| ribonuclease P protein component [Escherichia coli MS 117-3]
gi|327250847|gb|EGE62549.1| ribonuclease P protein component [Escherichia coli STEC_7v]
gi|330908021|gb|EGH36540.1| ribonuclease P protein component [Escherichia coli AA86]
gi|332084894|gb|EGI90077.1| ribonuclease P protein component [Shigella boydii 5216-82]
gi|332089515|gb|EGI94619.1| ribonuclease P protein component [Shigella boydii 3594-74]
gi|332345695|gb|AEE59029.1| ribonuclease P protein RnpA [Escherichia coli UMNK88]
gi|332750525|gb|EGJ80934.1| ribonuclease P protein component [Shigella flexneri K-671]
gi|332750696|gb|EGJ81104.1| ribonuclease P protein component [Shigella flexneri 4343-70]
gi|332751775|gb|EGJ82173.1| ribonuclease P protein component [Shigella flexneri 2747-71]
gi|332997071|gb|EGK16687.1| ribonuclease P protein component [Shigella flexneri K-218]
gi|332997870|gb|EGK17478.1| ribonuclease P protein component [Shigella flexneri K-272]
gi|333013262|gb|EGK32635.1| ribonuclease P protein component [Shigella flexneri K-304]
gi|333013665|gb|EGK33030.1| ribonuclease P protein component [Shigella flexneri K-227]
Length = 108
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|213581268|ref|ZP_03363094.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 138
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V ++ + P ++ L NS PR+G TV KK A ERNR++R +E+
Sbjct: 5 AHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESF 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
RL + D+V++AK+ + + L
Sbjct: 63 RLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEN 96
>gi|302872914|ref|YP_003841550.1| ribonuclease P protein component [Caldicellulosiruptor obsidiansis
OB47]
gi|302575773|gb|ADL43564.1| ribonuclease P protein component [Caldicellulosiruptor obsidiansis
OB47]
Length = 119
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNRYVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA++ A I K+ + +R +
Sbjct: 59 FKRIVRAWI-LENMDKIKQGFDIVVIARKIKDDKIKAREIHLKDYRDDLERAFKRLR 114
>gi|13878718|sp|P57915|RNPA_PASMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 119
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L N+ PR+G TV KK A +RNR++R +E+ RL + D+V++AK
Sbjct: 33 LTILARPNNLAHPRLGLTVAKKHLKKAHDRNRIKRLCRESFRLAQYKL--PNCDFVIVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + + L + +R+ R
Sbjct: 91 QGIGKLDNRTLTQTLDKLWQRHIR 114
>gi|26250445|ref|NP_756485.1| ribonuclease P [Escherichia coli CFT073]
gi|29427783|sp|Q8FBV5|RNPA_ECOL6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|26110875|gb|AAN83059.1|AE016769_174 Ribonuclease P protein component [Escherichia coli CFT073]
Length = 119
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGP 119
>gi|39938734|ref|NP_950500.1| ribonuclease P [Onion yellows phytoplasma OY-M]
gi|60390478|sp|Q6YQX5|RNPA_ONYPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|39721843|dbj|BAD04333.1| ribonuclease P [Onion yellows phytoplasma OY-M]
Length = 141
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V K + R G + + + +V KK G A ERN +
Sbjct: 27 MKRKYILKKESEITPVFKSKKRYGNSLFIIYYVKQTAFPHFKFALSVGKKYGKAHERNLI 86
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+RRL+ +R + + +V++ K A + F++L F++
Sbjct: 87 KRRLRAIIRSVSPCLNPKMF-FVIVIKAQAKNLTFQQLKTFFLQ 129
>gi|213421848|ref|ZP_03354914.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 103
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 AHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|311114012|ref|YP_003985233.1| ribonuclease P [Gardnerella vaginalis ATCC 14019]
gi|310945506|gb|ADP38210.1| ribonuclease P [Gardnerella vaginalis ATCC 14019]
Length = 175
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+++ R+G V+K G AV RN+++RR + + E +L +G D VL AK A F
Sbjct: 72 KNDVALRLGLAVSKSVGKAVIRNKVKRRFRVIAKEH-ESLLPYGCDVVLRAKPTAAQSSF 130
Query: 96 KELCNHFVERVRRNKRSYYSGKNF 119
L + + ++ F
Sbjct: 131 DSLNEQIKKIFGKIAKNLQDQNQF 154
>gi|291615645|ref|YP_003518387.1| RnpA [Pantoea ananatis LMG 20103]
gi|291150675|gb|ADD75259.1| RnpA [Pantoea ananatis LMG 20103]
gi|327395911|dbj|BAK13333.1| ribonuclease P protein component RnpA [Pantoea ananatis AJ13355]
Length = 119
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ + P ++ L N+ PR+G TV KK A ERNR++R +E+ RL +
Sbjct: 23 QQPQRAGTPQITI--LGRLNALGYPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHEL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D+V++AK+ + + L + RR+ R
Sbjct: 81 --PSMDFVVVAKKGVADLDNRMLAEALEKLWRRHCR 114
>gi|285019934|ref|YP_003377645.1| ribonuclease p protein [Xanthomonas albilineans GPE PC73]
gi|283475152|emb|CBA17651.1| probable ribonuclease p protein [Xanthomonas albilineans]
Length = 145
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 39 LLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
PR+G V++K AV RNR++R L+EA R + DYV++A+ A ++
Sbjct: 46 HPPRLGLAVSRKVDKRAVVRNRIKRVLREATRQLLPWLAPG--DYVVVARSAAAQASGQQ 103
Query: 98 LCNHFVERVRRN 109
L ++ +RR
Sbjct: 104 LRQAYLRLLRRA 115
>gi|255326483|ref|ZP_05367565.1| ribonuclease P protein component [Rothia mucilaginosa ATCC 25296]
gi|255296523|gb|EET75858.1| ribonuclease P protein component [Rothia mucilaginosa ATCC 25296]
Length = 121
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ +F+ + +R G ++ V N +VGF V+K G AV RN +
Sbjct: 2 LPQRHRMRTSAEFSHAFRSGIRTGRR-NIVVSTAKNPGKTTQVGFIVSKAVGNAVTRNLV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RRL+E L G+ + A + + +L + +
Sbjct: 61 KRRLRELAALTCAAH-PEGYAIAVRALPASASASWDQLRRDYESALE 106
>gi|296121796|ref|YP_003629574.1| ribonuclease P protein component [Planctomyces limnophilus DSM
3776]
gi|296014136|gb|ADG67375.1| ribonuclease P protein component [Planctomyces limnophilus DSM
3776]
Length = 162
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 16/120 (13%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNN--------------NNSNLLPRVGFTVTKKQG 52
L++ +F LV + + + L N + R+G +V+K++G
Sbjct: 10 LRRPAEFELVYRHKQKVADGVLLVFARRRSAHVPNQRTTETQNEDLSITRLGLSVSKRRG 69
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
AV RNR +R ++EA RL G D +++ + ++ V+ R+ R
Sbjct: 70 NAVVRNREKRLIREAFRLTQHER-PPGLDLIVVP-IATTPLTLDQVKQSLVKLSRKLDRR 127
>gi|153877060|ref|ZP_02004059.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
gi|152066476|gb|EDN65941.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
Length = 129
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVR 69
++ V + + L VL N+ + R+G +TKK+ AV+RNR++R ++E+ R
Sbjct: 17 AEYKYVFNKPYKSADRY-LTVLARLNAQDVARLGLAITKKRAKLAVDRNRIKRLIRESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++ G D V++AK + L + +
Sbjct: 76 HHQSDLV--GLDCVVLAKGGTKTTDNRTLLQSLAKHWQ 111
>gi|212712609|ref|ZP_03320737.1| hypothetical protein PROVALCAL_03704 [Providencia alcalifaciens DSM
30120]
gi|212684825|gb|EEB44353.1| hypothetical protein PROVALCAL_03704 [Providencia alcalifaciens DSM
30120]
Length = 119
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E RL + D+V++ +
Sbjct: 33 ITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PSMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
R + +++ + RR++R
Sbjct: 91 RGVADLDNQQITESLDKLWRRHRR 114
>gi|328950560|ref|YP_004367895.1| Ribonuclease P protein component [Marinithermus hydrothermalis DSM
14884]
gi|328450884|gb|AEB11785.1| Ribonuclease P protein component [Marinithermus hydrothermalis DSM
14884]
Length = 150
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L+ F V+KG + S+ L N S RVG V+KK G AV RN++
Sbjct: 45 RLTSLRGDAAFRRVRKGRPGRSRLVSVRWLPLNASE--IRVGIVVSKKVGKAVVRNKV-- 100
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ +R + + ++IA+ +A F+EL + + ++
Sbjct: 101 --RRRIREIVRRLHLPPAEIMIIARPEAAQASFQELARDLRKALAKS 145
>gi|322379153|ref|ZP_08053549.1| ribonuclease P, protein component (rnpA) [Helicobacter suis HS1]
gi|322381049|ref|ZP_08055077.1| ribonuclease P, protein component [Helicobacter suis HS5]
gi|321146519|gb|EFX41391.1| ribonuclease P, protein component [Helicobacter suis HS5]
gi|321148416|gb|EFX42920.1| ribonuclease P, protein component (rnpA) [Helicobacter suis HS1]
Length = 119
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 4 ICILKKRRQFA-LVKKGELRKGPFFSLEVLNNN------NSNLLPRVGFTVTKKQGCAVE 56
+ LK +QF L KKG FF++ L + + +G +V+KK G AV+
Sbjct: 1 MQSLKTTQQFNYLYKKGMRIHSKFFTMYSLPLDGLPKFFSYPSTSLLGLSVSKKVGNAVQ 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR++ + L+ V +AK + +K+L + + R +
Sbjct: 61 RNLIKRRVRSLFKNI---HLEKERVIVFVAKAGITQLKYKDLKQQVLACLYRKTKP 113
>gi|34763007|ref|ZP_00143983.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237741006|ref|ZP_04571487.1| ribonuclease P protein component [Fusobacterium sp. 4_1_13]
gi|27887308|gb|EAA24402.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229431050|gb|EEO41262.1| ribonuclease P protein component [Fusobacterium sp. 4_1_13]
Length = 111
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK +F + + +SL N N R GF +K+ G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF-NKNKLEYSRFGFVASKRVGKAFCRNRIKRL 59
Query: 64 LKEAVRLCAEG 74
+E +RL +
Sbjct: 60 FREYIRLNIDK 70
>gi|188579257|ref|YP_001916186.1| ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188523709|gb|ACD61654.1| ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 109
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ PR+G V++K AV RNR++R L++A+R + G DYV++A+ A
Sbjct: 6 RTGDTPPRLGMAVSRKVDTRAVGRNRIKRVLRDAMRHLLPELA--GGDYVIVARSAAAKA 63
Query: 94 PFKELCNHFVERVRRN 109
++ + F+ +RR
Sbjct: 64 TNPQIRDAFLRLLRRA 79
>gi|160914810|ref|ZP_02077024.1| hypothetical protein EUBDOL_00817 [Eubacterium dolichum DSM 3991]
gi|158433350|gb|EDP11639.1| hypothetical protein EUBDOL_00817 [Eubacterium dolichum DSM 3991]
Length = 108
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K R+F+ + + P F++ V RVG + KK G AV RN+
Sbjct: 1 MKKEYRIKSTREFSSIMNYKKFYACPSFTIYVKPRQQE--HARVGISAGKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++E V K D +++ + + H V+ K
Sbjct: 59 IKRQVREMVHDIYTFEEK--FDTIILVRVKYHEESYINNKKHLERLVKHVK 107
>gi|332654816|ref|ZP_08420558.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
gi|332516159|gb|EGJ45767.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
Length = 121
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK+ +F KG P+F++ N + R+G T K G AV+RNR
Sbjct: 1 MKHTIALKQNHEFRRLYNKGRSAVSPYFAIYCRKTNR--PISRLGITTGVKLGNAVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK--RSYYSGK 117
RRR++E R E L G+D V++A+ ++ +++L F++ +R+ + R K
Sbjct: 59 ARRRIRELYRTN-EARLAPGYDIVVVARTRVIYGRYRDLERSFLQLMRKLELVRPQEGAK 117
Query: 118 NFSR 121
+ +
Sbjct: 118 SEPK 121
>gi|116672713|ref|YP_833646.1| ribonuclease P protein component [Arthrobacter sp. FB24]
gi|166226698|sp|A0K2M6|RNPA_ARTS2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116612822|gb|ABK05546.1| ribonuclease P protein component [Arthrobacter sp. FB24]
Length = 136
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 8/129 (6%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L+ F+ V+ G L + R+GF V+K G AV RN
Sbjct: 2 LATRNRLRTSTDFSTTVRSGVRNGRRNVVLYTVAIAADEP-SRIGFIVSKSVGNAVVRNL 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY-----Y 114
++RRL+EA L + G V+ A A + +L + + +
Sbjct: 61 VKRRLREAGALSLQQYG-TGFAIVVRALPAAAAASWDQLLADYNAALETTMKRLGGRLPR 119
Query: 115 SGKNFSRKS 123
+ SR++
Sbjct: 120 AASVVSRET 128
>gi|291531379|emb|CBK96964.1| ribonuclease P protein component, eubacterial [Eubacterium siraeum
70/3]
Length = 129
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 8/125 (6%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + KKG+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYA--RESKRRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLCAE---GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR ++EA RL + +D++ +A+ + E+ +++ KR
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLRMGKQL--LKRYATPAN 121
Query: 118 NFSRK 122
N K
Sbjct: 122 NQPDK 126
>gi|315105161|gb|EFT77137.1| ribonuclease P protein component [Propionibacterium acnes HL050PA2]
Length = 140
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 48 GNCGSGEPLVSTTTSRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 106
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
G V+ A A P + + R
Sbjct: 107 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRK 139
>gi|255349182|ref|ZP_05381189.1| ribonuclease P [Chlamydia trachomatis 70]
gi|255503719|ref|ZP_05382109.1| ribonuclease P [Chlamydia trachomatis 70s]
Length = 120
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCYRADQVTLRVVPSRHSN-TRKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|296115057|ref|ZP_06833699.1| ribonuclease P protein component [Gluconacetobacter hansenii ATCC
23769]
gi|295978394|gb|EFG85130.1| ribonuclease P protein component [Gluconacetobacter hansenii ATCC
23769]
Length = 116
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LKKR +F V KG L+ L+ ++++ R GFTVTKK G +V R+R+RRR
Sbjct: 6 IRLKKRAEFLKVAAKGRKAPVSGMVLQALHRDDADS-ARHGFTVTKKVGNSVVRSRVRRR 64
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+E VR + G D V+I + + F L + + +++
Sbjct: 65 LREVVRQVGRELPLCGVDLVVIGRSATINRKFSSLLADYRKALKKA 110
>gi|94987511|ref|YP_595444.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
gi|94731760|emb|CAJ55123.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
Length = 79
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+G V+KK G AV RNR++R L+E RL E + D V++ K
Sbjct: 1 MGLAVSKKIGNAVVRNRIKRLLRECFRLHQE-YIPKSVDIVVVPK 44
>gi|161616959|ref|YP_001590924.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|213424950|ref|ZP_03357700.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213622274|ref|ZP_03375057.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|224585639|ref|YP_002639438.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238913092|ref|ZP_04656929.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289826406|ref|ZP_06545518.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|161366323|gb|ABX70091.1| hypothetical protein SPAB_04780 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|224470167|gb|ACN47997.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|321225559|gb|EFX50614.1| Ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322634392|gb|EFY31126.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322661662|gb|EFY57881.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322683662|gb|EFY79675.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322716819|gb|EFZ08390.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323204955|gb|EFZ89940.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323218632|gb|EGA03339.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323241399|gb|EGA25431.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|326625576|gb|EGE31921.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 108
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 AHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|238899056|ref|YP_002924738.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|259494110|sp|C4K7P7|RNPA_HAMD5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229466816|gb|ACQ68590.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 115
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ VL N PR+GF ++KK A RNR++R +E+ RL +L D++++AK
Sbjct: 34 ITVLARINDLKHPRIGFAISKKNVKHAHHRNRIKRLTRESFRLHQHFLLP--MDFIILAK 91
Query: 88 RDALFIPFKELCNHFVERVRR 108
+ + + L RR
Sbjct: 92 KGVDKLDNQVLNAVLERLWRR 112
>gi|269797067|ref|YP_003316522.1| ribonuclease P protein component [Sanguibacter keddieii DSM 10542]
gi|269099252|gb|ACZ23688.1| ribonuclease P protein component [Sanguibacter keddieii DSM 10542]
Length = 91
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ V + + P VGF V+K G AV RN+++RR++ V + L G V+ A
Sbjct: 2 VVHVAASGCAEDAPSVGFVVSKAVGNAVVRNKVKRRMRALVAERLD-TLPQGSLVVVRAL 60
Query: 88 RDALFIPFKELCNHFVERVRRNKRSY 113
+ + L + R+
Sbjct: 61 PASADAEYARLSGDLDSCLSRSLSRQ 86
>gi|210634755|ref|ZP_03298283.1| hypothetical protein COLSTE_02210 [Collinsella stercoris DSM 13279]
gi|210158695|gb|EEA89666.1| hypothetical protein COLSTE_02210 [Collinsella stercoris DSM 13279]
Length = 114
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K + F V +G+ P + + + + RV F K+ G AV RNR +R
Sbjct: 1 MQTIKSHQDFERVFTQGKRLNHPLIRMVICDCVSEGDPARVAFAAAKRLGNAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+EA R C + G + +L A +E+ +RR + + S ++
Sbjct: 61 VLREAARSCQLPI--EGREIILFATPRTRSASPEEMREALQTLLRRARVAAPSARS 114
>gi|21233658|ref|NP_639575.1| ribonuclease P [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770624|ref|YP_245386.1| ribonuclease P [Xanthomonas campestris pv. campestris str. 8004]
gi|188993862|ref|YP_001905872.1| ribonuclease P [Xanthomonas campestris pv. campestris str. B100]
gi|24638172|sp|Q8P337|RNPA_XANCP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|81303429|sp|Q4UNK7|RNPA_XANC8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890168|sp|B0RMM7|RNPA_XANCB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21115531|gb|AAM43457.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575956|gb|AAY51366.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. 8004]
gi|167735622|emb|CAP53840.1| ribonuclease P, protein component [Xanthomonas campestris pv.
campestris]
Length = 148
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDTARRTSDPLLSLHWR---SGETPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|21245085|ref|NP_644667.1| ribonuclease P [Xanthomonas axonopodis pv. citri str. 306]
gi|24638174|sp|Q8PEH6|RNPA_XANAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21110819|gb|AAM39203.1| ribonuclease P, protein component [Xanthomonas axonopodis pv. citri
str. 306]
Length = 145
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L++A+R + G DYV++A+ A ++ + F+ + R
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLHR 114
>gi|120556801|ref|YP_961152.1| ribonuclease P protein component [Marinobacter aquaeolei VT8]
gi|254808071|sp|A1U7J6|RNPA_MARAV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120326650|gb|ABM20965.1| ribonuclease P protein component [Marinobacter aquaeolei VT8]
Length = 132
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L K ++ V K P + +L + NS RVG +KK AV+RNR+
Sbjct: 7 PKSHRLLKPSDYSRVFNDVTLKVPHRNFLILASANSLGHARVGLIFSKKNLRLAVQRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R+++E RL + G D +++ ++ + + + + R K+ Y
Sbjct: 67 KRQVRETFRLQPDL---PGLDIIVLGRQGLDRLDNDTVRSSLNDLWHRVKKKYR 117
>gi|167750240|ref|ZP_02422367.1| hypothetical protein EUBSIR_01214 [Eubacterium siraeum DSM 15702]
gi|167656802|gb|EDS00932.1| hypothetical protein EUBSIR_01214 [Eubacterium siraeum DSM 15702]
Length = 129
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + KKG+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYA--RESKRRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLCAE---GVLKHGHDYVLIAKRDALFIPFKELCNHFVE-RVRRNKRSYYSG 116
RR ++EA RL + +D++ +A+ + E+ + ++R +
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLRMEKQLLKRYAAPANNQ 123
Query: 117 KNFSRK 122
+ +K
Sbjct: 124 PDKIQK 129
>gi|170289144|ref|YP_001739382.1| ribonuclease P protein component [Thermotoga sp. RQ2]
gi|238688852|sp|B1LBK1|RNPA_THESQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|170176647|gb|ACB09699.1| ribonuclease P protein component [Thermotoga sp. RQ2]
Length = 117
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+GE + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGESLQNEYFVVLFRKNGLD--YSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
G D V+I ++ + F + + ++R
Sbjct: 79 PKGFDIVVIPRKKLSEEFERVDFWTIREKLLNLLKR 114
>gi|46198385|ref|YP_004052.1| ribonuclease P protein subunit [Thermus thermophilus HB27]
gi|46196007|gb|AAS80425.1| ribonuclease P protein subunit [Thermus thermophilus HB27]
Length = 192
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G + S++ L RVG V+KK G AV RN+++
Sbjct: 90 KLLSLKGDRAFQRLRKGRAGRGRYVSVKWLP----AAELRVGIVVSKKVGKAVVRNKVK- 144
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A F EL V +R++
Sbjct: 145 ---RRLREILRRLHLPQAHLLVVASPEAREADFAELFRDVVRALRKS 188
>gi|296271543|ref|YP_003654175.1| ribonuclease P protein component [Thermobispora bispora DSM 43833]
gi|296094330|gb|ADG90282.1| ribonuclease P protein component [Thermobispora bispora DSM 43833]
Length = 124
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + +++ FA ++KG P L +++ P VGF V K G AV RNR
Sbjct: 2 LPSASRMRRGADFADAIRKGRRVGSPTLVLHFR-RRDTDAPPLVGFIVGKTVGRAVVRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+ +R + L G V+ A A + + L +
Sbjct: 61 VKRRLRHLMRDRLQ-CLPRGSLLVVRANPPAASMRSERLAAELDVALE 107
>gi|222035418|emb|CAP78163.1| ribonuclease P protein component [Escherichia coli LF82]
Length = 119
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRQAR 117
>gi|163842275|ref|YP_001626680.1| ribonuclease P protein component [Renibacterium salmoninarum ATCC
33209]
gi|162955751|gb|ABY25266.1| ribonuclease P protein component [Renibacterium salmoninarum ATCC
33209]
Length = 139
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCA 54
+ L+ +F+ V+ G L L + +L RVGF V K G A
Sbjct: 8 LPAANRLRASSEFSNTVRSGVRSGRRNLVLYALVEPSGVAEKTSLPSRVGFIVAKSVGNA 67
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
V RN ++RRL+ ++ G V+ A A ++EL N
Sbjct: 68 VVRNLVKRRLR-SLAASTVLQYPFGLRIVVRALPLAATSSWQELQND 113
>gi|219684026|ref|YP_002470409.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis AD011]
gi|241191632|ref|YP_002969026.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241197037|ref|YP_002970592.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|254808046|sp|B8DV04|RNPA_BIFA0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219621676|gb|ACL29833.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis AD011]
gi|240250024|gb|ACS46964.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251591|gb|ACS48530.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289177768|gb|ADC85014.1| Ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295794624|gb|ADG34159.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis V9]
Length = 118
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNLLP-----RVGFTVTKKQGCAVER 57
+ LK R+F V K R L + S R+G V+K G AV R
Sbjct: 1 MERLKNHREFVAVLKRRRRVSDADIVLHYVVRTPSTPTGAAPARRLGLAVSKSVGNAVVR 60
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
N ++RR + + E L D VL AK A F+ L R R
Sbjct: 61 NTVKRRFR-VLAHRYEHELPADCDIVLRAKPGAAHASFQSLEAQIQALFRAVMRK 114
>gi|220914668|ref|YP_002489977.1| ribonuclease P protein component [Arthrobacter chlorophenolicus A6]
gi|254808041|sp|B8H8Z3|RNPA_ARTCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219861546|gb|ACL41888.1| ribonuclease P protein component [Arthrobacter chlorophenolicus A6]
Length = 136
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ L+ F+ + +R G + + R+GF V+K G AV RN +
Sbjct: 2 LATRNRLRTSADFSTTVRSGVRNGRRNVVLYTAAIAAGEPSRIGFIVSKSVGNAVVRNLV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+EA G V+ A + + +L + + +
Sbjct: 62 KRRLREAGAASLREHG-TGLAIVVRALPASASASWDQLREDYDAALESTLNRLAGRPQRA 120
>gi|170022260|ref|YP_001727214.1| ribonuclease P protein component [Escherichia coli ATCC 8739]
gi|169757188|gb|ACA79887.1| ribonuclease P protein component [Escherichia coli ATCC 8739]
Length = 108
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + R G + +L NS PR+G T+ KK A ERNR++R +E+ R
Sbjct: 5 SQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTIAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|332308618|ref|YP_004436469.1| ribonuclease P protein component [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175947|gb|AEE25201.1| ribonuclease P protein component [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 120
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N++ PR+G TV KK A +RNR++R ++E+ R + + D V++ K
Sbjct: 33 LTLLARHNNSANPRLGITVAKKRVKKAHDRNRIKRIVRESFRNHQQSL--PNIDIVVVGK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRS 112
+ +EL + ++ +
Sbjct: 91 SGLDKLSNQELFLVLSKLWKKLAKR 115
>gi|301154701|emb|CBW14164.1| protein C5 component of RNase P [Haemophilus parainfluenzae T3T1]
Length = 122
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHDRNRIKRLVRESFRLSQHNL--PSCDFVFVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
R + + + R+ R
Sbjct: 91 RGIGQLDNQTFLQTLDKLWARHIR 114
>gi|89074707|ref|ZP_01161165.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90581129|ref|ZP_01236928.1| ribonuclease P [Vibrio angustum S14]
gi|89049471|gb|EAR55032.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90437650|gb|EAS62842.1| ribonuclease P [Vibrio angustum S14]
Length = 118
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N PR+G V KK AV+RNR +R ++E+ RL + D+V+IAK
Sbjct: 33 LTILARSNELNCPRLGLAVPKKQIKTAVDRNRFKRIVRESFRL--KQHQLPAKDFVVIAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYY 114
+ A + +EL + R R
Sbjct: 91 KSANELSNEELFKLLDKLWHRLSRPSR 117
>gi|16131572|ref|NP_418159.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
MG1655]
gi|24114986|ref|NP_709496.1| ribonuclease P [Shigella flexneri 2a str. 301]
gi|30065012|ref|NP_839183.1| ribonuclease P [Shigella flexneri 2a str. 2457T]
gi|74314018|ref|YP_312437.1| ribonuclease P [Shigella sonnei Ss046]
gi|82546032|ref|YP_409979.1| ribonuclease P [Shigella boydii Sb227]
gi|82779233|ref|YP_405582.1| ribonuclease P [Shigella dysenteriae Sd197]
gi|89110309|ref|AP_004089.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
W3110]
gi|91213227|ref|YP_543213.1| ribonuclease P [Escherichia coli UTI89]
gi|117625979|ref|YP_859302.1| ribonuclease P [Escherichia coli APEC O1]
gi|157156562|ref|YP_001465189.1| ribonuclease P [Escherichia coli E24377A]
gi|157163184|ref|YP_001460502.1| ribonuclease P [Escherichia coli HS]
gi|170083205|ref|YP_001732525.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
DH10B]
gi|170679855|ref|YP_001746034.1| ribonuclease P [Escherichia coli SMS-3-5]
gi|170766655|ref|ZP_02901108.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|187731058|ref|YP_001882462.1| ribonuclease P [Shigella boydii CDC 3083-94]
gi|188492336|ref|ZP_02999606.1| ribonuclease P protein component [Escherichia coli 53638]
gi|191165811|ref|ZP_03027649.1| ribonuclease P protein component [Escherichia coli B7A]
gi|191170299|ref|ZP_03031852.1| ribonuclease P protein component [Escherichia coli F11]
gi|193063844|ref|ZP_03044931.1| ribonuclease P protein component [Escherichia coli E22]
gi|193069131|ref|ZP_03050088.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194428119|ref|ZP_03060663.1| ribonuclease P protein component [Escherichia coli B171]
gi|194435905|ref|ZP_03068008.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209921181|ref|YP_002295265.1| ribonuclease P [Escherichia coli SE11]
gi|215489044|ref|YP_002331475.1| ribonuclease P [Escherichia coli O127:H6 str. E2348/69]
gi|218551234|ref|YP_002385026.1| ribonuclease P [Escherichia fergusonii ATCC 35469]
gi|218556270|ref|YP_002389184.1| ribonuclease P [Escherichia coli IAI1]
gi|218560779|ref|YP_002393692.1| ribonuclease P [Escherichia coli S88]
gi|218691992|ref|YP_002400204.1| ribonuclease P [Escherichia coli ED1a]
gi|218697426|ref|YP_002405093.1| ribonuclease P [Escherichia coli 55989]
gi|218702553|ref|YP_002410182.1| ribonuclease P [Escherichia coli IAI39]
gi|218707350|ref|YP_002414869.1| ribonuclease P [Escherichia coli UMN026]
gi|237703506|ref|ZP_04533987.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238902794|ref|YP_002928590.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|254038923|ref|ZP_04872975.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|254163655|ref|YP_003046763.1| ribonuclease P [Escherichia coli B str. REL606]
gi|260846511|ref|YP_003224289.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|260857885|ref|YP_003231776.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|260870435|ref|YP_003236837.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|291285123|ref|YP_003501941.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|293407344|ref|ZP_06651266.1| rnpA [Escherichia coli FVEC1412]
gi|293413159|ref|ZP_06655825.1| ribonuclease P [Escherichia coli B354]
gi|293417176|ref|ZP_06659803.1| ribonuclease P [Escherichia coli B185]
gi|293464027|ref|ZP_06664441.1| ribonuclease P [Escherichia coli B088]
gi|298383085|ref|ZP_06992680.1| rnpA [Escherichia coli FVEC1302]
gi|309784246|ref|ZP_07678885.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|331644428|ref|ZP_08345557.1| ribonuclease P protein component [Escherichia coli H736]
gi|331649531|ref|ZP_08350617.1| ribonuclease P protein component [Escherichia coli M605]
gi|331655365|ref|ZP_08356364.1| ribonuclease P protein component [Escherichia coli M718]
gi|331660047|ref|ZP_08360985.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331665354|ref|ZP_08366255.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331670548|ref|ZP_08371387.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331675195|ref|ZP_08375948.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331679802|ref|ZP_08380472.1| ribonuclease P protein component [Escherichia coli H591]
gi|331685428|ref|ZP_08386014.1| ribonuclease P protein component [Escherichia coli H299]
gi|332282507|ref|ZP_08394920.1| ribonuclease P protein component [Shigella sp. D9]
gi|67472378|sp|P0A7Y8|RNPA_ECOLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67472379|sp|P0A7Y9|RNPA_SHIFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122421837|sp|Q1R4N2|RNPA_ECOUT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123558281|sp|Q31UV7|RNPA_SHIBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123561064|sp|Q329B4|RNPA_SHIDS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123615902|sp|Q3YWB0|RNPA_SHISS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226717|sp|A1AHN8|RNPA_ECOK1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991076|sp|A7ZTR0|RNPA_ECO24 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991077|sp|A8A6G5|RNPA_ECOHS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736863|sp|B7MGC5|RNPA_ECO45 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736864|sp|B7NR06|RNPA_ECO7I RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736865|sp|B7M556|RNPA_ECO8A RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736866|sp|B7NF21|RNPA_ECOLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736867|sp|B1LL31|RNPA_ECOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736868|sp|B7LK46|RNPA_ESCF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741388|sp|B6I3T7|RNPA_ECOSE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890166|sp|B1X9T2|RNPA_ECODH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691695|sp|B2TUS4|RNPA_SHIB3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808065|sp|B7UMH1|RNPA_ECO27 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808066|sp|B7L844|RNPA_ECO55 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808067|sp|B7N2E9|RNPA_ECO81 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494105|sp|C4ZYY1|RNPA_ECOBW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147683|gb|AAA24567.1| ribonuclease P protein component [Escherichia coli]
gi|290552|gb|AAA62055.1| RNase P, protein component [Escherichia coli]
gi|1790139|gb|AAC76727.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
MG1655]
gi|24054238|gb|AAN45203.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
301]
gi|30043273|gb|AAP18994.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
2457T]
gi|73857495|gb|AAZ90202.1| RNase P, protein component [Shigella sonnei Ss046]
gi|81243381|gb|ABB64091.1| RNase P, protein component [Shigella dysenteriae Sd197]
gi|81247443|gb|ABB68151.1| RnpA [Shigella boydii Sb227]
gi|85676340|dbj|BAE77590.1| protein C5 component of RNase P [Escherichia coli str. K12 substr.
W3110]
gi|91074801|gb|ABE09682.1| ribonuclease P protein component [Escherichia coli UTI89]
gi|115515103|gb|ABJ03178.1| inner membrane protein translocase component YidC [Escherichia coli
APEC O1]
gi|157068864|gb|ABV08119.1| ribonuclease P protein component [Escherichia coli HS]
gi|157078592|gb|ABV18300.1| ribonuclease P protein component [Escherichia coli E24377A]
gi|169891040|gb|ACB04747.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
DH10B]
gi|170124093|gb|EDS93024.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|170517573|gb|ACB15751.1| ribonuclease P protein component [Escherichia coli SMS-3-5]
gi|187428050|gb|ACD07324.1| ribonuclease P protein component [Shigella boydii CDC 3083-94]
gi|188487535|gb|EDU62638.1| ribonuclease P protein component [Escherichia coli 53638]
gi|190904135|gb|EDV63846.1| ribonuclease P protein component [Escherichia coli B7A]
gi|190909107|gb|EDV68693.1| ribonuclease P protein component [Escherichia coli F11]
gi|192930559|gb|EDV83166.1| ribonuclease P protein component [Escherichia coli E22]
gi|192957455|gb|EDV87901.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194413877|gb|EDX30155.1| ribonuclease P protein component [Escherichia coli B171]
gi|194425448|gb|EDX41432.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209754088|gb|ACI75351.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754094|gb|ACI75354.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209914440|dbj|BAG79514.1| ribonuclease P protein component [Escherichia coli SE11]
gi|215267116|emb|CAS11563.1| protein C5 component of RNase P [Escherichia coli O127:H6 str.
E2348/69]
gi|218354158|emb|CAV00761.1| protein C5 component of RNase P [Escherichia coli 55989]
gi|218358776|emb|CAQ91434.1| protein C5 component of RNase P [Escherichia fergusonii ATCC 35469]
gi|218363039|emb|CAR00678.1| protein C5 component of RNase P [Escherichia coli IAI1]
gi|218367548|emb|CAR05333.1| protein C5 component of RNase P [Escherichia coli S88]
gi|218372539|emb|CAR20414.1| protein C5 component of RNase P [Escherichia coli IAI39]
gi|218429556|emb|CAR10520.2| protein C5 component of RNase P [Escherichia coli ED1a]
gi|218434447|emb|CAR15375.1| protein C5 component of RNase P [Escherichia coli UMN026]
gi|226838888|gb|EEH70915.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|226902770|gb|EEH89029.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238863295|gb|ACR65293.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|242379243|emb|CAQ34048.1| RNAse P protein component; processes tRNA, 4.5S RNA, subunit of
RNase P [Escherichia coli BL21(DE3)]
gi|253975556|gb|ACT41227.1| ribonuclease P [Escherichia coli B str. REL606]
gi|253979712|gb|ACT45382.1| ribonuclease P [Escherichia coli BL21(DE3)]
gi|257756534|dbj|BAI28036.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|257761658|dbj|BAI33155.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|257766791|dbj|BAI38286.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|281180759|dbj|BAI57089.1| ribonuclease P protein component [Escherichia coli SE15]
gi|281603070|gb|ADA76054.1| RNase P, protein component (Protein C5), processes tRNA, 45S RNA
[Shigella flexneri 2002017]
gi|284923787|emb|CBG36885.1| ribonuclease P protein component [Escherichia coli 042]
gi|290764996|gb|ADD58957.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|291321659|gb|EFE61095.1| ribonuclease P [Escherichia coli B088]
gi|291425635|gb|EFE98671.1| rnpA [Escherichia coli FVEC1412]
gi|291431207|gb|EFF04200.1| ribonuclease P [Escherichia coli B185]
gi|291468292|gb|EFF10787.1| ribonuclease P [Escherichia coli B354]
gi|294490598|gb|ADE89354.1| ribonuclease P protein component [Escherichia coli IHE3034]
gi|298276921|gb|EFI18439.1| rnpA [Escherichia coli FVEC1302]
gi|308927753|gb|EFP73221.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|309704151|emb|CBJ03498.1| ribonuclease P protein component [Escherichia coli ETEC H10407]
gi|315138288|dbj|BAJ45447.1| protein C5 component of RNase P [Escherichia coli DH1]
gi|323380929|gb|ADX53197.1| ribonuclease P protein component [Escherichia coli KO11]
gi|323934945|gb|EGB31323.1| ribonuclease P [Escherichia coli E1520]
gi|323939233|gb|EGB35446.1| ribonuclease P [Escherichia coli E482]
gi|323944176|gb|EGB40256.1| ribonuclease P [Escherichia coli H120]
gi|323949948|gb|EGB45832.1| ribonuclease P [Escherichia coli H252]
gi|323955001|gb|EGB50779.1| ribonuclease P [Escherichia coli H263]
gi|323959769|gb|EGB55419.1| ribonuclease P [Escherichia coli H489]
gi|323965765|gb|EGB61216.1| ribonuclease P [Escherichia coli M863]
gi|323971181|gb|EGB66427.1| ribonuclease P [Escherichia coli TA007]
gi|323975229|gb|EGB70333.1| ribonuclease P [Escherichia coli TW10509]
gi|324111601|gb|EGC05582.1| ribonuclease P [Escherichia fergusonii B253]
gi|324115944|gb|EGC09870.1| ribonuclease P [Escherichia coli E1167]
gi|331036722|gb|EGI08948.1| ribonuclease P protein component [Escherichia coli H736]
gi|331042029|gb|EGI14173.1| ribonuclease P protein component [Escherichia coli M605]
gi|331047380|gb|EGI19458.1| ribonuclease P protein component [Escherichia coli M718]
gi|331053262|gb|EGI25295.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331057864|gb|EGI29850.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331062610|gb|EGI34530.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331067640|gb|EGI39042.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331072974|gb|EGI44299.1| ribonuclease P protein component [Escherichia coli H591]
gi|331077799|gb|EGI49011.1| ribonuclease P protein component [Escherichia coli H299]
gi|332104859|gb|EGJ08205.1| ribonuclease P protein component [Shigella sp. D9]
gi|332764075|gb|EGJ94312.1| ribonuclease P protein component [Shigella flexneri 2930-71]
gi|224748|prf||1112173A RNase P
Length = 119
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|283458993|ref|YP_003363643.1| RNase P protein component [Rothia mucilaginosa DY-18]
gi|283135058|dbj|BAI65823.1| RNase P protein component [Rothia mucilaginosa DY-18]
Length = 121
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ +F+ + +R G ++ V N +VGF V+K G AV RN +
Sbjct: 2 LPQRHRMRTSTEFSHAFRSGIRTGRR-NIVVSTAKNPGKTTQVGFIVSKAVGNAVTRNLV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RRL+E L G+ + A + + +L + +
Sbjct: 61 KRRLRELAALTCAAH-PEGYAIAVRALPASASASWDQLRRDYESALE 106
>gi|261346744|ref|ZP_05974388.1| ribonuclease P protein component [Providencia rustigianii DSM 4541]
gi|282565144|gb|EFB70679.1| ribonuclease P protein component [Providencia rustigianii DSM 4541]
Length = 119
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E RL + D+V++ +
Sbjct: 33 ITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PPMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +++ + RR++R
Sbjct: 91 KGVANLDNQQITESLDKLWRRHRR 114
>gi|258655510|ref|YP_003204666.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
gi|258558735|gb|ACV81677.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
Length = 130
Score = 61.4 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVER 57
+ L QFA V ++G P + +L PRVGF V+ K G AV R
Sbjct: 2 LPAGSRLHTSEQFAAVVRRGSRSAAPRLVVHLLTEHRPGPPADPRVGFVVSGKVGNAVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+R+ RRL+ VR L G D V+ A A EL
Sbjct: 62 HRITRRLRALVRPRLAE-LPPGTDVVVRALPAAAAASSAELGVDLA 106
>gi|52424538|ref|YP_087675.1| ribonuclease P [Mannheimia succiniciproducens MBEL55E]
gi|60390344|sp|Q65VC0|RNPA_MANSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52306590|gb|AAU37090.1| RnpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 122
Score = 61.4 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + LR + +L N PR+G TV KK A ERNR++R +E+ R
Sbjct: 16 AQFKYVFEQPLRASTP-EITILARRNDLQYPRLGLTVAKKHLKRAHERNRVKRLCRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V++AK + + +R+ R
Sbjct: 75 LLQHEL--PNYDFVIVAKHGIGKLDNPTFTAILSKLWQRHIR 114
>gi|314961661|gb|EFT05762.1| ribonuclease P [Propionibacterium acnes HL002PA2]
gi|327333671|gb|EGE75388.1| ribonuclease P protein component [Propionibacterium acnes HL096PA3]
Length = 95
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 2 GNCGSGEPLVSTTTSRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 60
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 61 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 95
>gi|302535575|ref|ZP_07287917.1| ribonuclease P protein component [Streptomyces sp. C]
gi|302444470|gb|EFL16286.1| ribonuclease P protein component [Streptomyces sp. C]
Length = 124
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQGCAVE 56
L++R FA V++G P + + + +++ PR GF V+K G AV
Sbjct: 7 RLRRREDFASAVRRGRRAGRPLLVVHLRTSGATDPHEPGDADPSPRAGFVVSKAVGIAVV 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RNR++RRL+ VR L G V+ A A EL + R
Sbjct: 67 RNRVKRRLRHLVRDRLAQ-LPAGSLVVVRALPGAADAGVDELARDLDAALAR 117
>gi|195936326|ref|ZP_03081708.1| ribonuclease P [Escherichia coli O157:H7 str. EC4024]
gi|261225857|ref|ZP_05940138.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
FRIK2000]
gi|320191196|gb|EFW65846.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
EC1212]
gi|320639429|gb|EFX09044.1| ribonuclease P [Escherichia coli O157:H7 str. G5101]
gi|326337247|gb|EGD61082.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
1044]
gi|326341618|gb|EGD65407.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
1125]
Length = 108
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 5 SQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 64 LRQHEL--PAMDFVVVAKKGVANLDNRALSEALEKLWRRHCR 103
>gi|148261130|ref|YP_001235257.1| ribonuclease P protein component [Acidiphilium cryptum JF-5]
gi|326404531|ref|YP_004284613.1| ribonuclease P protein component [Acidiphilium multivorum AIU301]
gi|146402811|gb|ABQ31338.1| ribonuclease P protein component [Acidiphilium cryptum JF-5]
gi|325051393|dbj|BAJ81731.1| ribonuclease P protein component [Acidiphilium multivorum AIU301]
Length = 120
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L +R F G F +++L R+G T ++K G AV RNR RRRL+
Sbjct: 9 LPQRADFLRAAAHGRKAAREGFVVQILL-TMPGAPVRLGLTASRKVGNAVIRNRARRRLR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R G D VLIA++ F L F +
Sbjct: 68 ALAREELRHRSVSGADIVLIARKGTATAEFSSLRADFRAVL 108
>gi|323342259|ref|ZP_08082491.1| ribonuclease P protein component [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463371|gb|EFY08565.1| ribonuclease P protein component [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 108
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + K F++ + N R G KK G AV RN+
Sbjct: 1 MREEFRVKKAAEFQKIMGARRFKNTKAFTVYIDKRTKDN--SRYGIAAPKKLGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ L + +DY+++ ++ ++E ++ K
Sbjct: 59 TKRQIR--SMLQDINMFDTPYDYIVLVRKKYYEQSYEENQKDLENLIKTVK 107
>gi|139439860|ref|ZP_01773225.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
gi|133774788|gb|EBA38608.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
Length = 112
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R+ F V +G P + + + RV F K+ GCAV RNR +R
Sbjct: 1 MKTIKSRQDFEHVFSQGRRFNHPLIRMTICESVGEGDSGRVAFVGAKRLGCAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++EA R C G G+D +L A +E+ ++R
Sbjct: 61 VMREAARSC--GFPVAGYDIILFATPKTRVSSPQEMDKALRSLMKRA 105
>gi|312136224|ref|YP_004003562.1| ribonuclease p protein component [Caldicellulosiruptor owensensis
OL]
gi|311776275|gb|ADQ05762.1| ribonuclease P protein component [Caldicellulosiruptor owensensis
OL]
Length = 119
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N + R G +++ K G A RNR
Sbjct: 1 MNKYVALKKNEEFEACIRRGRFAAQEKVVVYSLKN--GLTVSRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + L +K G D V+IA+R A I K+ +R +
Sbjct: 59 FKRVVRAWI-LENIDKIKQGFDIVVIARRIKDDKIKAREIHLKDFKEDLERAFKRLR 114
>gi|283787596|ref|YP_003367461.1| protein C5 component of RNase P [Citrobacter rodentium ICC168]
gi|282951050|emb|CBG90728.1| protein C5 component of RNase P [Citrobacter rodentium ICC168]
Length = 119
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKHVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|152979766|ref|YP_001345395.1| ribonuclease P protein component [Actinobacillus succinogenes 130Z]
gi|150841489|gb|ABR75460.1| ribonuclease P protein component [Actinobacillus succinogenes 130Z]
Length = 124
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R +L +NS PR+G TV KK A +RNR++R +E+ R
Sbjct: 18 EHFRHVFQNPQRASTPEVT-ILARSNSVGNPRLGLTVAKKHLKRAHDRNRIKRLCRESFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + +D+V++AK + + +R+ R
Sbjct: 77 LLQHEL--PNYDFVIVAKAGIGKLDNSTFTASLAKLWQRHIR 116
>gi|314922675|gb|EFS86506.1| ribonuclease P [Propionibacterium acnes HL001PA1]
Length = 95
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 2 GNCGSGEPLVSTTTSRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 60
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 61 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 95
>gi|224283950|ref|ZP_03647272.1| ribonuclease P protein component [Bifidobacterium bifidum NCIMB
41171]
gi|313141102|ref|ZP_07803295.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
gi|313133612|gb|EFR51229.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
Length = 123
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGP-----FFSLEVLNNN---NSNLLPRVGFTVTKKQGCAV 55
+ LK R F V K + F + + +++++ R+G V+K G AV
Sbjct: 1 MKRLKSHRDFIAVLKRRFKVTDSDIVVHFVVHDDTRDVQASADIMRRMGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RNR++RR + R E +L D V+ AK A + F +L F + ++
Sbjct: 61 TRNRVKRRFRVLARR-YEDMLPMQCDIVVRAKPSASRVDFADLDRQFSRCFAKVTTTH 117
>gi|87122921|ref|ZP_01078786.1| ribonuclease P protein component [Marinomonas sp. MED121]
gi|86161794|gb|EAQ63094.1| ribonuclease P protein component [Marinomonas sp. MED121]
Length = 132
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
F L ++ L R+G V KK AV RNR++R ++E+ R + G D V +
Sbjct: 34 FLLLATKRDDD--LSRLGLIVAKKNEKRAVGRNRIKRLVRESFRHHKVELA--GFDVVFL 89
Query: 86 AKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
A++ + L + + + N + +
Sbjct: 90 ARQGIKELDNPTLAKRIDKAWHQLIKRSKKANNQPKDT 127
>gi|260580089|ref|ZP_05847919.1| ribonuclease P [Haemophilus influenzae RdAW]
gi|260093373|gb|EEW77306.1| ribonuclease P [Haemophilus influenzae RdAW]
Length = 128
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 42 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 99
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 100 NGIGKLDNNTFAQILEKLWQRHIR 123
>gi|157144346|ref|YP_001451665.1| ribonuclease P [Citrobacter koseri ATCC BAA-895]
gi|166226710|sp|A8ACL6|RNPA_CITK8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157081551|gb|ABV11229.1| hypothetical protein CKO_00050 [Citrobacter koseri ATCC BAA-895]
Length = 119
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|16762485|ref|NP_458102.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16767125|ref|NP_462740.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143973|ref|NP_807315.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56415713|ref|YP_152788.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168242060|ref|ZP_02666992.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260375|ref|ZP_02682348.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168464829|ref|ZP_02698721.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194442892|ref|YP_002043090.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194448360|ref|YP_002047873.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194471801|ref|ZP_03077785.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736278|ref|YP_002116784.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197249097|ref|YP_002148778.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197265669|ref|ZP_03165743.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198243786|ref|YP_002217790.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200388996|ref|ZP_03215608.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928601|ref|ZP_03219800.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354573|ref|YP_002228374.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859066|ref|YP_002245717.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213052695|ref|ZP_03345573.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213648783|ref|ZP_03378836.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|54039264|sp|P66687|RNPA_SALTI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042178|sp|P66686|RNPA_SALTY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461318|sp|Q5PKU4|RNPA_SALPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741392|sp|B5EYX4|RNPA_SALA4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741393|sp|B5FN12|RNPA_SALDC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741394|sp|B5QUQ2|RNPA_SALEP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741395|sp|B5RFY5|RNPA_SALG2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690238|sp|B4TAV1|RNPA_SALHS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690701|sp|B4TN09|RNPA_SALSV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238693554|sp|B4SYB0|RNPA_SALNS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|25289267|pir||AG0957 RNase P, protein component [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422414|gb|AAL22699.1| RNase P [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16504790|emb|CAD03155.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139609|gb|AAO71175.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56129970|gb|AAV79476.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194401555|gb|ACF61777.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406664|gb|ACF66883.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194458165|gb|EDX47004.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711780|gb|ACF91001.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195632089|gb|EDX50573.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197212800|gb|ACH50197.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243924|gb|EDY26544.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197938302|gb|ACH75635.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199606094|gb|EDZ04639.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322034|gb|EDZ07232.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274354|emb|CAR39379.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205339035|gb|EDZ25799.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205350335|gb|EDZ36966.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206710869|emb|CAR35233.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261248981|emb|CBG26838.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996127|gb|ACY91012.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160373|emb|CBW19898.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914969|dbj|BAJ38943.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320088261|emb|CBY98023.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322617248|gb|EFY14153.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619064|gb|EFY15950.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625131|gb|EFY21959.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630182|gb|EFY26953.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322635277|gb|EFY31992.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642899|gb|EFY39483.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647621|gb|EFY44108.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650573|gb|EFY46980.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656401|gb|EFY52693.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322661581|gb|EFY57804.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322668224|gb|EFY64382.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672847|gb|EFY68955.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322674972|gb|EFY71058.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322687738|gb|EFY83707.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323132201|gb|ADX19631.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323192047|gb|EFZ77282.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200529|gb|EFZ85607.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323206698|gb|EFZ91655.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211770|gb|EFZ96603.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323220033|gb|EGA04503.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224803|gb|EGA09068.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232488|gb|EGA16590.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235263|gb|EGA19348.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241051|gb|EGA25088.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323248630|gb|EGA32560.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252071|gb|EGA35931.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258625|gb|EGA42288.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262344|gb|EGA45902.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268180|gb|EGA51656.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270594|gb|EGA54039.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326629709|gb|EGE36052.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
gi|332990690|gb|AEF09673.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 119
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|85712626|ref|ZP_01043673.1| RNase P protein component [Idiomarina baltica OS145]
gi|85693617|gb|EAQ31568.1| RNase P protein component [Idiomarina baltica OS145]
Length = 88
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
N PR+G T++KK+ AV RNR +R+++E RL + D V+IAK +
Sbjct: 5 PNQLGHPRIGVTISKKRAKTAVARNRFKRQVRETFRLKQHNI--PAFDIVVIAKHGIDTL 62
Query: 94 PFKELCNHFVERVRRNKRS 112
++ + R+ +
Sbjct: 63 DNAQMADTLNYLWRKLAKR 81
>gi|254362248|ref|ZP_04978362.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261492908|ref|ZP_05989454.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496742|ref|ZP_05993117.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093823|gb|EDN74758.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261307581|gb|EEY08909.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311449|gb|EEY12606.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 124
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + P +L NN N PR+G TV KK A +RNR++R ++E+ R
Sbjct: 17 QFKAVFEEPLRASTPQMTLLARENNLEN--PRLGLTVAKKHLKRAHDRNRIKRIVRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
L + D+V +AK + L + R+ R
Sbjct: 75 LKQHEL--PNFDFVFVAKGGIGKLDNATLFETLEKLWSRHIRLSKKPAQQ 122
>gi|1075286|pir||F64107 ribonuclease P (EC 3.1.26.5) protein component - Haemophilus
influenzae (strain Rd KW20)
Length = 136
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 50 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 107
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 108 NGIGKLDNNTFAQILEKLWQRHIR 131
>gi|182437491|ref|YP_001825210.1| putative RNase P component [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778146|ref|ZP_08237411.1| Ribonuclease P protein component [Streptomyces cf. griseus
XylebKG-1]
gi|238688985|sp|B1VPE8|RNPA_STRGG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|178466007|dbj|BAG20527.1| putative RNase P component [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658479|gb|EGE43325.1| Ribonuclease P protein component [Streptomyces cf. griseus
XylebKG-1]
Length = 123
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL--------PRVGFTVTKKQG 52
+ L++R FA + R G + L + +++ PR GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGDTDPHVTGETVPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++RRL+ VR L G V+ A A +L ++R
Sbjct: 62 GAVVRTAVKRRLRHLVRDRLAQ-LPPGSLVVVRALPGAGDADHAQLARDLDAALQR 116
>gi|133184|sp|P25817|RNPA_STRBI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|153427|gb|AAA26808.1| rnpA [Streptomyces bikiniensis]
Length = 123
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ V L G V+ A A +L ++R
Sbjct: 62 GAVVRNQVKRRLRHLV-CDRLSALPPGSLVVVRALPGAGDADHAQLARDLDAALQR 116
>gi|226326923|ref|ZP_03802441.1| hypothetical protein PROPEN_00783 [Proteus penneri ATCC 35198]
gi|225204760|gb|EEG87114.1| hypothetical protein PROPEN_00783 [Proteus penneri ATCC 35198]
Length = 84
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 32 LNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
+ N PR+G T+ KK A ERNR++R +E RL + D+VL+ ++
Sbjct: 1 MGRQNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PPMDFVLLVRKGV 58
Query: 91 LFIPFKELCNHFVERVRRNKR 111
+ +L + RR+ R
Sbjct: 59 AELDNHQLTEVLGKLWRRHCR 79
>gi|313103918|pdb|3OK7|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna
gi|313103921|pdb|3OKB|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna And In The Presence Of 5' Leader
gi|325534016|pdb|3Q1Q|A Chain A, Structure Of A Bacterial Ribonuclease P Holoenzyme In
Complex With Trna
gi|325534019|pdb|3Q1R|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna And In The Presence Of 5' Leader
Length = 118
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 23 KEGKSLQNEYFVVLFRKNGLD--YSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 79
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
G D V+I ++ + F + + ++R
Sbjct: 80 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKR 115
>gi|157964070|ref|YP_001504104.1| ribonuclease P [Shewanella pealeana ATCC 700345]
gi|167626218|ref|YP_001676512.1| ribonuclease P [Shewanella halifaxensis HAW-EB4]
gi|157849070|gb|ABV89569.1| ribonuclease P protein component [Shewanella pealeana ATCC 700345]
gi|167356240|gb|ABZ78853.1| ribonuclease P protein component [Shewanella halifaxensis HAW-EB4]
Length = 120
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R +++ R
Sbjct: 18 AQFKSVFTKPIKASSA-EITLLAIPNSEQHPRLGLTVAKRYVKKANQRNRIKRIIRDNFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + L + EL N + R+ R Y
Sbjct: 77 LHQHDL--PAVDIVVLVRNGVLDMENAELKNLVEKLWRKLSRRY 118
>gi|308051503|ref|YP_003915069.1| ribonuclease P protein component [Ferrimonas balearica DSM 9799]
gi|307633693|gb|ADN77995.1| ribonuclease P protein component [Ferrimonas balearica DSM 9799]
Length = 119
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V P +L + N + PR+G T+ KK A +RNR++R ++++ R
Sbjct: 17 DFKPVFANPVRAASPQLTLLAVPNELA--HPRIGLTIAKKQVKKACQRNRIKRIVRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L + D V+I K+ + L + R+ R
Sbjct: 75 LHQHDL--PAVDIVVIGKKGVELLDNAALHKLVDKLWRKLSRR 115
>gi|291327296|ref|ZP_06127707.2| ribonuclease P protein component [Providencia rettgeri DSM 1131]
gi|291310907|gb|EFE51360.1| ribonuclease P protein component [Providencia rettgeri DSM 1131]
Length = 119
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PR+G T+ KK A ERNR++R +E RL + D+V++ +
Sbjct: 33 ITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PSMDFVVLVR 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +++ + RR++R
Sbjct: 91 KGVANLDNQQITEALDKLWRRHRR 114
>gi|15605517|ref|NP_220303.1| ribonuclease P [Chlamydia trachomatis D/UW-3/CX]
gi|255311619|ref|ZP_05354189.1| ribonuclease P [Chlamydia trachomatis 6276]
gi|255317920|ref|ZP_05359166.1| ribonuclease P [Chlamydia trachomatis 6276s]
gi|9789779|sp|O84789|RNPA_CHLTR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3329249|gb|AAC68379.1| Ribonuclease P Protein Component [Chlamydia trachomatis D/UW-3/CX]
gi|296437264|gb|ADH19434.1| ribonuclease P [Chlamydia trachomatis G/11222]
gi|297748912|gb|ADI51458.1| Ribonuclease P protein component [Chlamydia trachomatis D-EC]
gi|297749792|gb|ADI52470.1| Ribonuclease P protein component [Chlamydia trachomatis D-LC]
Length = 120
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSN-TRKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|282853037|ref|ZP_06262374.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
gi|282582490|gb|EFB87870.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
Length = 148
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 55 GNCGSGEPLVSTTTSRSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 113
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 114 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 148
>gi|212715147|ref|ZP_03323275.1| hypothetical protein BIFCAT_00033 [Bifidobacterium catenulatum DSM
16992]
gi|212661828|gb|EEB22403.1| hypothetical protein BIFCAT_00033 [Bifidobacterium catenulatum DSM
16992]
Length = 91
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG V+K G AV RN ++RR + R E +L D VL AK A F L
Sbjct: 17 RVGLAVSKAVGNAVTRNTVKRRFRVLAR-KYESLLPESCDIVLRAKPSAARADFLSLEQQ 75
Query: 102 FVERVRRNKRSY 113
KR
Sbjct: 76 MASCFEAVKRKT 87
>gi|302552693|ref|ZP_07305035.1| ribonuclease P [Streptomyces viridochromogenes DSM 40736]
gi|302470311|gb|EFL33404.1| ribonuclease P [Streptomyces viridochromogenes DSM 40736]
Length = 123
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + + +P R GF V+K G
Sbjct: 2 LPTEHRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHVPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R L G V+ A + +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRERVAQ-LPPGSLVVVRALPGSGDADHAQLARDLDAALQR 116
>gi|255507400|ref|ZP_05383039.1| ribonuclease P [Chlamydia trachomatis D(s)2923]
gi|289525828|emb|CBJ15309.1| ribonuclease P protein component [Chlamydia trachomatis Sweden2]
gi|296435408|gb|ADH17586.1| ribonuclease P [Chlamydia trachomatis E/150]
gi|296439125|gb|ADH21278.1| ribonuclease P [Chlamydia trachomatis E/11023]
Length = 120
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRSGRCCRADQVTLRVVPSRHSN-TRKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|197364641|ref|YP_002144278.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238690764|sp|B5BIL6|RNPA_SALPK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|197096118|emb|CAR61714.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 119
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V + R G + +L NS PR+G TV KK A ERNR++R +E+ R
Sbjct: 16 AHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L + D+V++AK+ + + L + RR+ R
Sbjct: 75 LRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|15644212|ref|NP_229262.1| ribonuclease P protein component [Thermotoga maritima MSB8]
gi|9789801|sp|Q9X1H4|RNPA_THEMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4982028|gb|AAD36531.1|AE001797_11 ribonuclease P protein component [Thermotoga maritima MSB8]
Length = 117
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGKSLQNEYFVVLFRKNGLD--YSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
G D V+I ++ + F + + ++R
Sbjct: 79 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKR 114
>gi|113460281|ref|YP_718339.1| ribonuclease P [Haemophilus somnus 129PT]
gi|170718323|ref|YP_001785334.1| ribonuclease P [Haemophilus somnus 2336]
gi|122945112|sp|Q0I0Y9|RNPA_HAES1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043736|sp|B0URU5|RNPA_HAES2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|112822324|gb|ABI24413.1| ribonuclease P protein component [Haemophilus somnus 129PT]
gi|168826452|gb|ACA31823.1| ribonuclease P protein component [Haemophilus somnus 2336]
Length = 119
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V +K P ++ NN R+G TV KK A +RNR++R +E+
Sbjct: 16 SHFKCVFQKPLRVSTPEITILARKNNLE--HSRLGLTVAKKHLKRAHDRNRVKRISRESF 73
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RL + +D+V+I K+ + ++L + +R+ R
Sbjct: 74 RLLQGQLA--NYDFVIITKKGIGNLDNQQLFQTLDKLWKRHIR 114
>gi|116750021|ref|YP_846708.1| ribonuclease P protein component [Syntrophobacter fumaroxidans
MPOB]
gi|229470487|sp|A0LLH1|RNPA_SYNFM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116699085|gb|ABK18273.1| ribonuclease P protein component [Syntrophobacter fumaroxidans
MPOB]
Length = 119
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ + VK+ G + F + N+ R+G V K+ AV RNR++RR++
Sbjct: 13 LRASDDYQRVKRSGRRVRTAHFGVNFAANDL--PHHRLGLVVQKRYWNAVGRNRIKRRIR 70
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
E RL + D V++A+ A + ++ +
Sbjct: 71 EWFRLNKTRIPAPYRDIVVVARPGAEKLSSLDVTKELL 108
>gi|261338548|ref|ZP_05966432.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
gi|270276570|gb|EFA22424.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
Length = 89
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
R+G V+K G AV RN ++RR + R E VL G D V+ AK A F+
Sbjct: 11 DAPARRLGLAVSKSVGNAVVRNAVKRRFRVLAR-TYEDVLPLGCDVVMRAKPSAAHASFQ 69
Query: 97 ELCNHFVERVR 107
L + +
Sbjct: 70 SLDLQVHKLFK 80
>gi|332995879|gb|AEF05934.1| ribonuclease P protein component [Alteromonas sp. SN2]
Length = 119
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F++ L N+ PR+G T+ KK A +RNR++R ++E+ R + D
Sbjct: 30 SPSFTI--LARTNTLPSPRLGITLAKKRIRKAHDRNRLKRLIRESFRHKQHDL--PNVDI 85
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++I K A + +E+ + ++ +
Sbjct: 86 IVIGKSGADKLSNQEIFATMDKLWKKLAKR 115
>gi|33357536|pdb|1NZ0|A Chain A, Rnase P Protein From Thermotoga Maritima
gi|33357537|pdb|1NZ0|C Chain C, Rnase P Protein From Thermotoga Maritima
gi|33357538|pdb|1NZ0|B Chain B, Rnase P Protein From Thermotoga Maritima
gi|33357539|pdb|1NZ0|D Chain D, Rnase P Protein From Thermotoga Maritima
Length = 118
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 23 KEGKSLQNEYFVVLFRKNGXD--YSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 79
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
G D V+I ++ + F + + ++R
Sbjct: 80 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKR 115
>gi|119026648|ref|YP_910493.1| ribonuclease P protein component [Bifidobacterium adolescentis ATCC
15703]
gi|154486343|ref|ZP_02027750.1| hypothetical protein BIFADO_00152 [Bifidobacterium adolescentis
L2-32]
gi|166226702|sp|A1A3X8|RNPA_BIFAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118766232|dbj|BAF40411.1| ribonuclease P protein component [Bifidobacterium adolescentis ATCC
15703]
gi|154084206|gb|EDN83251.1| hypothetical protein BIFADO_00152 [Bifidobacterium adolescentis
L2-32]
Length = 121
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 42/120 (35%), Gaps = 9/120 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN--------LLPRVGFTVTKKQGCAV 55
+ LK R F V K R + ++ RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYLMHDDVVTGDTATVQGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RN ++RR + R E +L D VL AK A F L KR S
Sbjct: 61 TRNAVKRRFRVLAR-KYESLLPESCDIVLRAKPSAARADFLSLEQQMASCFEAVKRKTAS 119
>gi|315086611|gb|EFT58587.1| ribonuclease P protein component [Propionibacterium acnes HL002PA3]
Length = 141
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 48 GNCGSGEPLVSTTTSRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 106
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 107 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 141
>gi|297200937|ref|ZP_06918334.1| ribonuclease P [Streptomyces sviceus ATCC 29083]
gi|197716891|gb|EDY60925.1| ribonuclease P [Streptomyces sviceus ATCC 29083]
Length = 123
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPSLVVHFRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + G V+ A +A ++L V+R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRV-LLFPPGSLVVVRALPEAGDADHEQLARDLDAAVQR 116
>gi|238921765|ref|YP_002935280.1| ribonuclease P protein component, [Edwardsiella ictaluri 93-146]
gi|259494106|sp|C5BF62|RNPA_EDWI9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238871334|gb|ACR71045.1| ribonuclease P protein component, putative [Edwardsiella ictaluri
93-146]
Length = 119
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L NS PR+G TV KK A ERNR++R +E+ RL D+V+I K
Sbjct: 33 LTILGRMNSLGYPRIGLTVAKKHVKRAHERNRIKRLTRESFRL--RQHSLPAMDFVVIVK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYS 115
+ + + L + RR+ R +
Sbjct: 91 KGVQELDNRALTEMLEKLWRRHCRQARA 118
>gi|15804298|ref|NP_290337.1| ribonuclease P [Escherichia coli O157:H7 EDL933]
gi|15833893|ref|NP_312666.1| ribonuclease P [Escherichia coli O157:H7 str. Sakai]
gi|168748578|ref|ZP_02773600.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|168753595|ref|ZP_02778602.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|168772259|ref|ZP_02797266.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|168779928|ref|ZP_02804935.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|168786536|ref|ZP_02811543.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|168798741|ref|ZP_02823748.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208806396|ref|ZP_03248733.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208813040|ref|ZP_03254369.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208819513|ref|ZP_03259833.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209396527|ref|YP_002273232.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|217326050|ref|ZP_03442134.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254795707|ref|YP_003080544.1| ribonuclease P [Escherichia coli O157:H7 str. TW14359]
gi|261258902|ref|ZP_05951435.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
FRIK966]
gi|21263938|sp|Q8XB43|RNPA_ECO57 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741387|sp|B5YXA8|RNPA_ECO5E RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12518543|gb|AAG58901.1|AE005601_7 RNase P, protein component; protein C5; processes tRNA, 4.5S RNA
[Escherichia coli O157:H7 str. EDL933]
gi|13364114|dbj|BAB38062.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
Sakai]
gi|187771399|gb|EDU35243.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|188016991|gb|EDU55113.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|189002536|gb|EDU71522.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|189359348|gb|EDU77767.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|189373418|gb|EDU91834.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|189378731|gb|EDU97147.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208726197|gb|EDZ75798.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208734317|gb|EDZ83004.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208739636|gb|EDZ87318.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209157927|gb|ACI35360.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|209754090|gb|ACI75352.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754092|gb|ACI75353.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754096|gb|ACI75355.1| 60 KD inner-membrane protein [Escherichia coli]
gi|217322271|gb|EEC30695.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254595107|gb|ACT74468.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
TW14359]
Length = 119
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRLRQHEL--PAMDFVVVAKKGVANLDNRALSEALEKLWRRHCR 114
>gi|154496120|ref|ZP_02034816.1| hypothetical protein BACCAP_00404 [Bacteroides capillosus ATCC
29799]
gi|150274675|gb|EDN01739.1| hypothetical protein BACCAP_00404 [Bacteroides capillosus ATCC
29799]
Length = 115
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK +F KG+ P ++ N R+GFT K G AV RNR
Sbjct: 1 MDHTVSLKLNHEFRRLYAKGKSAVNPCMAVYCRKNRLG--YNRLGFTTGTKLGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+RRRL+E R E ++ G+D V++A+ A + EL F+
Sbjct: 59 VRRRLREIYRTN-EDKIRPGYDIVVVARVRACHSRYAELQRQFLR 102
>gi|197333937|ref|YP_002154776.1| ribonuclease P protein component [Vibrio fischeri MJ11]
gi|197315427|gb|ACH64874.1| ribonuclease P protein component [Vibrio fischeri MJ11]
Length = 107
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 11 RQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
+ V K P F++ L NS PR+G V KK AV RN+ +R ++E+
Sbjct: 5 EDYKFVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNKFKRIVRESF 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R + D+V+IAK+ A + ++ + R R
Sbjct: 63 R--NKQHSLPAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 106
>gi|118475116|ref|YP_891742.1| ribonuclease P protein component [Campylobacter fetus subsp. fetus
82-40]
gi|118414342|gb|ABK82762.1| ribonuclease P protein component [Campylobacter fetus subsp. fetus
82-40]
Length = 110
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 11 RQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
++F V +G + + L ++ + +KK G AV RNR++R L+ A
Sbjct: 13 KEFIRVYQGAKKWHFECAVIYFLESDTTKFAA----VASKKVGKAVVRNRIKRVLRSAF- 67
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
LK G Y+LIAK +PF ++ + +++
Sbjct: 68 FNFSSELKDGI-YILIAKAGLEKMPFDKVEKNLKWALKK 105
>gi|302336543|ref|YP_003801750.1| ribonuclease P protein component [Olsenella uli DSM 7084]
gi|301320383|gb|ADK68870.1| ribonuclease P protein component [Olsenella uli DSM 7084]
Length = 106
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +K +R+F V G R + + +V F K+ G AV RNR +R
Sbjct: 1 METIKSKREFEKVFSGGKRVNHRLVRACVLRTDEGGFGKVAFVAPKRLGNAVYRNRCKRV 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L+EA RL G G D +L+A R E+ + R
Sbjct: 61 LREAARL--SGFPLEGADVILLATRQTHESHPSEVGRAIASLIER 103
>gi|297193297|ref|ZP_06910695.1| ribonuclease P protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197718386|gb|EDY62294.1| ribonuclease P protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 123
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPR-------VGFTVTKKQG 52
+ L++R FA + R G P + + + P GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGTTDPHAPGESASPTCAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R L G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLIRDRL-SELPPGSLVVVRALPGAGDAEHAQLARDLDAALQR 116
>gi|83649690|ref|YP_438125.1| ribonuclease P protein component [Hahella chejuensis KCTC 2396]
gi|83637733|gb|ABC33700.1| ribonuclease P protein component [Hahella chejuensis KCTC 2396]
Length = 97
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PRVG + KK A RNR+RR ++EA RL + D V++A+
Sbjct: 1 MLLLAIPNQLSHPRVGLVIAKKNIKLATGRNRVRRLIREAFRLQQANI--PSVDIVVLAR 58
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+ + +E+ + R + + + + S
Sbjct: 59 KAVADMNNEEVFQCLTKLYSRIGQQHANALAKANSS 94
>gi|294790222|ref|ZP_06755380.1| ribonuclease P [Scardovia inopinata F0304]
gi|294458119|gb|EFG26472.1| ribonuclease P [Scardovia inopinata F0304]
Length = 133
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 16/119 (13%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK F V K + + + R+G V+K G AV+RN+++RR
Sbjct: 1 MDRLKKHDDFLAVLKTRKKAVSKDLVVHYKISGQTGRLRLGLAVSKAVGHAVDRNKVKRR 60
Query: 64 LKEAVRLCAEGVLKH----------------GHDYVLIAKRDALFIPFKELCNHFVERV 106
+ R + D V+ AK A + F +L +
Sbjct: 61 FRVLARRHENLLKIPLASDDSADSVDLCRFLSLDCVMRAKPSAAHVTFNQLDKQVEKLF 119
>gi|221633071|ref|YP_002522296.1| ribonuclease P protein component [Thermomicrobium roseum DSM 5159]
gi|221157186|gb|ACM06313.1| ribonuclease P protein component [Thermomicrobium roseum DSM 5159]
Length = 129
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++ +F V++ + N R GF + ++ G AV RN+++R L+
Sbjct: 7 RLRRSSEFERVRRRGRSVSNRLLVVSFA-ANQLGENRYGFAIGRRVGKAVRRNKVKRWLR 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALF--IPFKELCNHFVERVRRN 109
EAVR L+ G+D V +A+ + + + E + R
Sbjct: 66 EAVRRLHPR-LRQGYDIVFVARGALADPAMTYHRVVAAVEELLDRA 110
>gi|21326647|gb|AAL30087.1| ribonuclease P [Xanthomonas campestris pv. campestris]
Length = 148
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + R+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTVVFDTARRTSDPLLSLHWR---SGETPARLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|294665121|ref|ZP_06730424.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292605122|gb|EFF48470.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 146
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ R Q+ +V P SL + PR+G V++K AV RNR
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDPLLSLHWRT---GDTPPRLGMAVSRKVDTRAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 68 IKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRAGALPLPAAAP 125
Query: 120 SRKS 123
Sbjct: 126 GTMP 129
>gi|300869000|ref|ZP_07113603.1| ribonuclease P [Oscillatoria sp. PCC 6506]
gi|300332980|emb|CBN58795.1| ribonuclease P [Oscillatoria sp. PCC 6506]
Length = 129
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPR------------VGFTV 47
+ L+++ F+ V +KG R +L L ++N L + +G ++
Sbjct: 2 LPPANRLRRKEDFSAVYRKGIRRNSHHLTLRALRHSNKAELAQQQKDLKSLPATCIGISI 61
Query: 48 TKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ K +V RNR++R+++ A+R + G + V++ + A + E + +
Sbjct: 62 SLKVSKRSVVRNRIKRQIRAALRQMLPR-ISPGWNLVIVVRPTAQECNYGEFLQELEQLL 120
>gi|149911781|ref|ZP_01900385.1| ribonuclease P [Moritella sp. PE36]
gi|149805127|gb|EDM65149.1| ribonuclease P [Moritella sp. PE36]
Length = 93
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L NNS PR+G V KK AV RNR++R ++E+ R D V+IAK
Sbjct: 8 ITILAKNNSLGHPRLGLAVPKKAIKLAVGRNRVKRLIRESFRTRQHDF--PNVDIVVIAK 65
Query: 88 RDALFIPFKELCNHFVERVRRNKRS 112
+ E+ + R+ R
Sbjct: 66 SGIANLENAEIDALLEKLWRKLCRR 90
>gi|256830918|ref|YP_003159646.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
gi|256580094|gb|ACU91230.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
Length = 87
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
+L ++ L R+G TV++K G +V RNR++R ++E RL + D V++ KR
Sbjct: 1 MLEREDAGLSWRLGLTVSRKIGKSVRRNRVKRLVREYFRLHQHDF-RLCADIVVVPKRGV 59
Query: 91 L--FIPFKELCNHFVERVRRNKRSYYSG 116
+ ++ + + + +
Sbjct: 60 CVDSMDLAQVSSELGPLMTKIVSRVGAA 87
>gi|149197355|ref|ZP_01874406.1| ribonuclease P [Lentisphaera araneosa HTCC2155]
gi|149139373|gb|EDM27775.1| ribonuclease P [Lentisphaera araneosa HTCC2155]
Length = 131
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
L K +F ++ E +G L + R+G V+K+ AV+RNR
Sbjct: 23 PKSHRLVKGHEFRYMRENAESIRGKSIILCYAPAPDDQR--RLGIVVSKRFHKHAVKRNR 80
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++EA R + + +V+I++ E+ ++ + ++K
Sbjct: 81 AKRIIREAYRHLQDKL--PNCWFVIISRAHLSGKSSIEVQEELLKLIDKSK 129
>gi|257465187|ref|ZP_05629558.1| ribonuclease P protein component [Actinobacillus minor 202]
gi|257450847|gb|EEV24890.1| ribonuclease P protein component [Actinobacillus minor 202]
Length = 114
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + P +L L N +PR+G TV KK A +RNR++R ++E R
Sbjct: 6 QFKAVFENPQRASTPQMTL--LAKANDAEVPRLGLTVAKKHLKRAHDRNRIKRIVRETFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + D+V +AK + L + R+ R +
Sbjct: 64 LKQHEL--PCADFVFVAKAGIGKLDNATLFETLEKLWARHIRLSKNP 108
>gi|59710611|ref|YP_203387.1| ribonuclease P [Vibrio fischeri ES114]
gi|67461223|sp|Q5E8Z7|RNPA_VIBF1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59478712|gb|AAW84499.1| ribonuclease P protein component [Vibrio fischeri ES114]
Length = 117
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 11 RQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
+ V K P F++ L NS PR+G V KK AV RN+ +R ++E+
Sbjct: 15 EDYKFVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNKFKRIVRESF 72
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R + D+V+IAK+ A + ++ + R R
Sbjct: 73 R--NKQHSLPAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|147679255|ref|YP_001213470.1| RNase P protein component [Pelotomaculum thermopropionicum SI]
gi|189043740|sp|A5CY49|RNPA_PELTS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146275352|dbj|BAF61101.1| RNase P protein component [Pelotomaculum thermopropionicum SI]
Length = 112
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +LKK + + V ++G+ + L+NN R GF V++K AV RNR
Sbjct: 1 MKVLDVLKKNKDYGRVCRRGKSVADRHIVMYFLDNNLGRC--RYGFAVSRKIRSAVRRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR L+EA RL E G+D+V +A+RD + +++ ++ ++R +
Sbjct: 59 ARRLLREACRLNKEKF-PEGYDFVFMARRDMTDLKCQQVEESILKLLKRAE 108
>gi|313765028|gb|EFS36392.1| ribonuclease P protein component [Propionibacterium acnes HL013PA1]
Length = 141
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 48 GNCGSGEPLVSTTTSRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCR-PLVDELED 106
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 107 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 141
>gi|297182641|gb|ADI18799.1| hypothetical protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 121
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAV 55
M LK+ +QF + K + +F++ N N + F + K G AV
Sbjct: 1 MIKFQSLKQSKQFLRILKKKRLNTKYFTIYFEKNLSSAKKNDKNFLNISFVIKKNIGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKH--GHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RN+++R+LK AV+ + + YV+ + + F+ + + + +R K+
Sbjct: 61 IRNKIKRKLKSAVQKVLKEKQPVDLNYTYVIFGRNNVYKDKFRLIFDEVNDMFKRIKQ 118
>gi|46397712|sp|Q7X5K6|RNPA_THET8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461462|sp|Q72LI2|RNPA_THET2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908467|gb|AAO88977.1| RNase P protein subunit [Thermus thermophilus]
Length = 163
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G + S++ L RVG V+KK G AV RN+++
Sbjct: 61 KLLSLKGDRAFQRLRKGRAGRGRYVSVKWLP----AAELRVGIVVSKKVGKAVVRNKVK- 115
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A F EL V +R++
Sbjct: 116 ---RRLREILRRLHLPQAHLLVVASPEAREADFAELFRDVVRALRKS 159
>gi|229822698|ref|YP_002884224.1| ribonuclease P protein component [Beutenbergia cavernae DSM 12333]
gi|259494100|sp|C5C6N8|RNPA_BEUC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229568611|gb|ACQ82462.1| ribonuclease P protein component [Beutenbergia cavernae DSM 12333]
Length = 119
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ +++ +FA + R+G + ++ PRVGF V+K G AV RNR+
Sbjct: 2 LPAANRMRRSDEFARTFRRGTRRGTRRLVVHAATTDAGEPPRVGFVVSKAVGGAVVRNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+RRL+ + +L G V+ A + EL
Sbjct: 62 KRRLRAVLMHRVTDLL-PGTLVVVRALPPSANATSAELERD 101
>gi|76789526|ref|YP_328612.1| ribonuclease P [Chlamydia trachomatis A/HAR-13]
gi|237803214|ref|YP_002888408.1| ribonuclease P [Chlamydia trachomatis B/Jali20/OT]
gi|237805135|ref|YP_002889289.1| ribonuclease P [Chlamydia trachomatis B/TZ1A828/OT]
gi|123606588|sp|Q3KKQ8|RNPA_CHLTA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76168056|gb|AAX51064.1| ribonuclease P protein component [Chlamydia trachomatis A/HAR-13]
gi|231273435|emb|CAX10350.1| ribonuclease P protein component [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274448|emb|CAX11243.1| ribonuclease P protein component [Chlamydia trachomatis
B/Jali20/OT]
Length = 120
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSN-TRKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQAVISPRGNS-QPDFLKLSEELLQRI 108
>gi|126668971|ref|ZP_01739910.1| ribonuclease P [Marinobacter sp. ELB17]
gi|126626555|gb|EAZ97213.1| ribonuclease P [Marinobacter sp. ELB17]
Length = 138
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K + V K P + +L NS R+G KK AV+RNR+
Sbjct: 7 PKSHRLLKPADYGKVFDDVQLKVPHRNFLILATPNSLGHARIGLIFAKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+RR++E RL + D +++ ++ + ++ ++ +R +R Y
Sbjct: 67 KRRIRETFRLKQQL---PALDIIVLGRQGLAQLDNNQVNLALLDLWQRLERKYSK 118
>gi|212632923|ref|YP_002309448.1| ribonuclease P [Shewanella piezotolerans WP3]
gi|212554407|gb|ACJ26861.1| Ribonuclease P protein [Shewanella piezotolerans WP3]
Length = 120
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RN+++R +++ R
Sbjct: 18 AQFKSVFTKPIKASSA-EITLLAIPNSEQHPRLGLTVAKRYVKKAHQRNKIKRIIRDNFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + L + EL + R+ R Y
Sbjct: 77 LHQHDL--PAVDIVVLVRNGVLDMENAELKKLVEKLWRKLSRRY 118
>gi|190576476|ref|YP_001974321.1| putative ribonuclease P [Stenotrophomonas maltophilia K279a]
gi|190014398|emb|CAQ48046.1| putative ribonuclease P [Stenotrophomonas maltophilia K279a]
Length = 164
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
++ R +++ V G R P +L L ++ R+G V++K AV RNR
Sbjct: 23 PRSARVRTRAEYSTVFNGARRVSDPLMTLHWLP---ADRPARLGLAVSRKVDPNAVGRNR 79
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
++R L++ +R + D+V++A+ A E+ F
Sbjct: 80 IKRVLRDILRQTRTDIQPG--DFVVVARSAARSASNDEIRQAF 120
>gi|161505629|ref|YP_001572741.1| ribonuclease P [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189043744|sp|A9MJT8|RNPA_SALAR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160866976|gb|ABX23599.1| hypothetical protein SARI_03805 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 119
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L F V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ R + D+V++AK+ + + L + RR+ R
Sbjct: 66 KRLTRESFRQRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 114
>gi|262281560|ref|ZP_06059339.1| ribonuclease P protein component [Acinetobacter calcoaceticus
RUH2202]
gi|262257019|gb|EEY75758.1| ribonuclease P protein component [Acinetobacter calcoaceticus
RUH2202]
Length = 131
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 8 STDVRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 68 KRLARESFRLHQPNFG-SDIDIVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|311065164|ref|YP_003971890.1| ribonuclease P protein component RnpA [Bifidobacterium bifidum
PRL2010]
gi|310867484|gb|ADP36853.1| RnpA Ribonuclease P protein component [Bifidobacterium bifidum
PRL2010]
Length = 123
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGP-----FFSLEVLNNN---NSNLLPRVGFTVTKKQGCAV 55
+ LK R F V K + F + + +++++ R+G V+K G AV
Sbjct: 1 MKRLKSHRDFIAVLKRRFKVTDSDIVVHFVVHDDTRDVQASADIMRRMGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RNR++RR + R E +L D V+ AK A + F +L F + ++
Sbjct: 61 TRNRVKRRFRVLARR-YEDMLPMQCDIVVRAKPSASRVDFADLDRQFSRCFAKVTTTH 117
>gi|289427475|ref|ZP_06429188.1| ribonuclease P protein component [Propionibacterium acnes J165]
gi|289159405|gb|EFD07596.1| ribonuclease P protein component [Propionibacterium acnes J165]
Length = 148
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 55 GNCGSGEPLVSTTTSRSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELED 113
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 114 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 148
>gi|283851182|ref|ZP_06368465.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
gi|283573351|gb|EFC21328.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
Length = 89
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVE 104
++KK G AV RNR++R L+E RL A G + D V++AK+ D + F + C +
Sbjct: 3 ISKKVGNAVARNRVKRVLRECFRLAAPGAV-GALDIVVVAKKSLDPGLLTFDQACRDLLP 61
Query: 105 RVRRNKR 111
R +
Sbjct: 62 LFGRMAK 68
>gi|146297760|ref|YP_001181531.1| ribonuclease P protein component [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411336|gb|ABP68340.1| ribonuclease P protein component [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 143
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I +KK +F ++KG + L N R+G +++ K G A RNR
Sbjct: 25 MKKIVSIKKSEEFEACIRKGRFAAEKNVVVYSLKNGLE--YSRLGVSMSSKLGKATARNR 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD------ALFIPFKELCNHFVERVRRNK 110
+R +K E +K G D V++A++ A I K+ + +R +
Sbjct: 83 FKRIVKAWYLENFER-IKKGFDIVVLARKTKEEKIKAREICLKDYRDELERAFKRLR 138
>gi|165977384|ref|YP_001652977.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877485|gb|ABY70533.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 110
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + LR L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 6 QFKAVFEQPLRASTP-ELTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ D+V +AK + L + R+ R +
Sbjct: 65 KQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLAKKPQA 110
>gi|21222288|ref|NP_628067.1| ribonuclease P component [Streptomyces coelicolor A3(2)]
gi|1350816|sp|P48206|RNPA_STRCO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|456297|gb|AAA26732.1| RNase P protein [Streptomyces coelicolor A3(2)]
gi|4808377|emb|CAB42696.1| putative ribonuclease P component [Streptomyces coelicolor A3(2)]
Length = 123
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQG 52
+ L++R FA + R G + L + ++ R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRVGRSTLVVHLRSGATDPHAPGESAPRTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + +L G V+ A A +L + R
Sbjct: 62 VAVVRNKVKRRLRHLMRDRID-LLPPGSLVVVRALPGAGDADHAQLARDLDAALAR 116
>gi|51244706|ref|YP_064590.1| ribonuclease P, protein component [Desulfotalea psychrophila
LSv54]
gi|60390371|sp|Q6APZ0|RNPA_DESPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|50875743|emb|CAG35583.1| related to Ribonuclease P, protein component [Desulfotalea
psychrophila LSv54]
Length = 120
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K ++ V +G R G F++ L N+ N R+G +V +K AV+RNR
Sbjct: 6 LPKTAFVRKGWEYDAVYRGGRRLHGVGFTIIYLLNSTEN--NRLGISVHRKLRGAVKRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
++R ++E RL + D V +
Sbjct: 64 IKRIIRECFRLH-RDIFPQKADIVFAVRPG 92
>gi|46397717|sp|Q7X5L6|RNPA_THEBO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908452|gb|AAO88967.1| RNase P protein subunit [Thermus brockianus]
Length = 162
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG+ +G + S++ L RVG V+KK G AV RN+++
Sbjct: 60 KLVSLKGDRAFQRLRKGKAGRGRYVSVKWLP----APELRVGIVVSKKVGKAVVRNKVK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A + EL ++++
Sbjct: 115 ---RRLREILRRLHLPKAHLLVVASPEAREASYVELFQDVARALKKS 158
>gi|303251715|ref|ZP_07337886.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649145|gb|EFL79330.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 109
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + LR L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 6 QFKAVFEQPLRASTP-ELTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ D+V +AK + L + R+ R
Sbjct: 65 KQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLTKKP 108
>gi|319897490|ref|YP_004135687.1| ribonuclease p protein component [Haemophilus influenzae F3031]
gi|329123021|ref|ZP_08251592.1| ribonuclease P protein component [Haemophilus aegyptius ATCC 11116]
gi|317432996|emb|CBY81367.1| Ribonuclease P protein component [Haemophilus influenzae F3031]
gi|327471952|gb|EGF17392.1| ribonuclease P protein component [Haemophilus aegyptius ATCC 11116]
Length = 119
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 91 NGIGKLDNSTFAQILEKLWQRHIR 114
>gi|260581923|ref|ZP_05849719.1| ribonuclease P [Haemophilus influenzae NT127]
gi|260095116|gb|EEW79008.1| ribonuclease P [Haemophilus influenzae NT127]
Length = 119
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 91 NGIGKLDNSTFAQILEKLWQRHIR 114
>gi|183602666|ref|ZP_02964030.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis HN019]
gi|183218084|gb|EDT88731.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis HN019]
Length = 93
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G V+K G AV RN ++RR + + E L D VL AK A F+ L
Sbjct: 17 PARRLGLAVSKSVGNAVVRNTVKRRFR-VLAHRYEHELPADCDIVLRAKPGAAHASFQSL 75
Query: 99 CNHFVERVRRNKRS 112
R R
Sbjct: 76 EAQIQALFRAVMRK 89
>gi|254384776|ref|ZP_05000113.1| ribonuclease P protein component [Streptomyces sp. Mg1]
gi|194343658|gb|EDX24624.1| ribonuclease P protein component [Streptomyces sp. Mg1]
Length = 124
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLL--------PRVGFTVTKKQGCAVE 56
L++R FA V++G P + + + ++ R GF V+K G AV
Sbjct: 7 RLRRREDFASAVRRGRRAGRPLLVVHLRTSGATDPHEPGEIDPSTRAGFVVSKAVGIAVV 66
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RNR++RRL+ VR L G V+ A + EL + R
Sbjct: 67 RNRVKRRLRHLVRERLSQ-LPPGSLVVVRALPGSGDAGLDELARDLDAALAR 117
>gi|319957041|ref|YP_004168304.1| ribonuclease p protein component [Nitratifractor salsuginis DSM
16511]
gi|319419445|gb|ADV46555.1| ribonuclease P protein component [Nitratifractor salsuginis DSM
16511]
Length = 121
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 1 MSNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
++ + ++R F V + ++ P+F L + + V F KK G AV RN
Sbjct: 4 LNRFQRITQQRDFDRVYRRADKVWHTPWFVLFYQKGSRYS----VAFVAGKKVGKAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R +RRL+ + Y+L+AK L + + EL + + + R+ S +
Sbjct: 60 RAKRRLRALFQERIAEYRPGS--YILVAKAAILDVEYAELQQAWSKALERSGAIQPSARR 117
Query: 119 FSR 121
R
Sbjct: 118 AVR 120
>gi|304414289|ref|ZP_07395657.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
gi|304283503|gb|EFL91899.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
Length = 114
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L FA V + + G + L N PR+GF + KK A ERNR+
Sbjct: 7 PRELRLLTPASFAFVFQQPKQAGTP-QITFLGRMNELGHPRIGFAIAKKQIKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RR ++E+ RL + D+V++AK+ A+ + L + R R
Sbjct: 66 RRLIRESFRLRQHQL--PSMDFVVLAKKGAVELDNLVLAKMLEKLWHRYCR 114
>gi|296436334|gb|ADH18508.1| ribonuclease P [Chlamydia trachomatis G/9768]
gi|296438193|gb|ADH20354.1| ribonuclease P [Chlamydia trachomatis G/11074]
gi|297140694|gb|ADH97452.1| ribonuclease P [Chlamydia trachomatis G/9301]
Length = 120
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSN-TRKVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPNFLKLSEELLQRI 108
>gi|262277965|ref|ZP_06055758.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
gi|262225068|gb|EEY75527.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
Length = 117
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV--TKKQGCAVERNRMRRRLKEAV 68
++F V G+ F++ N NNS+ + + KK G AV+RNRMRRRLK A
Sbjct: 14 KEFKEVLSGKKISSNLFTIFYKNKNNSDQNKEILLSCVAAKKLGNAVKRNRMRRRLKMAT 73
Query: 69 R---LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R + + K Y + AK F+ + N ++R
Sbjct: 74 RKAIIEIKNNFKKKFKYAIFAKPKIYDENFQNIVNELTSKLR 115
>gi|294630336|ref|ZP_06708896.1| ribonuclease P [Streptomyces sp. e14]
gi|292833669|gb|EFF92018.1| ribonuclease P [Streptomyces sp. e14]
Length = 123
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R +L G V+ A + +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRVT-LLPPGSLVVVRALPGSGDAEHAQLARDLDAALQR 116
>gi|255320705|ref|ZP_05361882.1| ribonuclease P protein component [Acinetobacter radioresistens
SK82]
gi|262380665|ref|ZP_06073818.1| ribonuclease P [Acinetobacter radioresistens SH164]
gi|255302321|gb|EET81561.1| ribonuclease P protein component [Acinetobacter radioresistens
SK82]
gi|262297613|gb|EEY85529.1| ribonuclease P [Acinetobacter radioresistens SH164]
Length = 130
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 3/115 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 7 STAVRIRCAADYKSVFDGALFKVHQPHFLFLARPTELHHSRLGIVVAKKKVRRAHERNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL + + D V++ K I EL ++ +R
Sbjct: 67 KRLARESFRLHQQQLEL--LDIVVMPKIGIEDISNAELHQQLQIAWQKLQRQVKK 119
>gi|16272935|ref|NP_439161.1| ribonuclease P [Haemophilus influenzae Rd KW20]
gi|145628058|ref|ZP_01783859.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145634174|ref|ZP_01789885.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145637304|ref|ZP_01792965.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145638180|ref|ZP_01793790.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145640674|ref|ZP_01796257.1| ribonuclease P [Haemophilus influenzae R3021]
gi|229843942|ref|ZP_04464083.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|2507338|sp|P44306|RNPA_HAEIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1574030|gb|AAC22661.1| ribonuclease P (rnpA) [Haemophilus influenzae Rd KW20]
gi|144979833|gb|EDJ89492.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145268618|gb|EDK08611.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145269556|gb|EDK09498.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145272509|gb|EDK12416.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145274600|gb|EDK14463.1| ribonuclease P [Haemophilus influenzae 22.4-21]
gi|229812936|gb|EEP48624.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|309751336|gb|ADO81320.1| Ribonuclease P, protein component [Haemophilus influenzae R2866]
gi|309973502|gb|ADO96703.1| Ribonuclease P, protein component [Haemophilus influenzae R2846]
Length = 119
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 91 NGIGKLDNNTFAQILEKLWQRHIR 114
>gi|302520511|ref|ZP_07272853.1| ribonuclease P [Streptomyces sp. SPB78]
gi|302429406|gb|EFL01222.1| ribonuclease P [Streptomyces sp. SPB78]
Length = 123
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQG 52
+ + L++R F+ + R G + L + +++ R GF V+K G
Sbjct: 2 LPSDNRLRRREDFSTAVRRGRRAGRPLLVVHLKSGSTDPHATGENTPPVRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++R+L+ +R +L G V+ A A +L ++R
Sbjct: 62 KAVVRTSVKRKLRHLIRDRL-SLLPPGSLVVVRALPGAGDADHAQLARDLDAALKR 116
>gi|311696591|gb|ADP99464.1| ribonuclease P protein component [marine bacterium HP15]
Length = 135
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L + + V K P + +L N+ R+G +KK AV+RNR+
Sbjct: 7 PKSHRLLRPADYGKVFNDVQLKVPHRNFLILATPNNLGHARIGLIFSKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R+++E+ R + G D V++ ++ + + + + RR ++ Y
Sbjct: 67 KRQVRESFRHQTDL---PGLDLVILGRQGLVSLDNHSVRASMDDLWRRLRKKY 116
>gi|222475343|ref|YP_002563760.1| hypothetical protein AMF_665 [Anaplasma marginale str. Florida]
gi|254995152|ref|ZP_05277342.1| hypothetical protein AmarM_04121 [Anaplasma marginale str.
Mississippi]
gi|255003325|ref|ZP_05278289.1| hypothetical protein AmarPR_03651 [Anaplasma marginale str. Puerto
Rico]
gi|255004450|ref|ZP_05279251.1| hypothetical protein AmarV_03921 [Anaplasma marginale str.
Virginia]
gi|222419481|gb|ACM49504.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 141
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAV 55
+ + LKKR++FA + G L+ + + S+ L RVGFTV+KK G +V
Sbjct: 20 LKGVVTLKKRKEFARARFSGRSASSKGLLLQAVEDSAHPPGSDGLVRVGFTVSKKSGNSV 79
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR+RRRL+ + G YV ++ L + V ++R +
Sbjct: 80 VRNRIRRRLRVIAQDVISTSAARGFCYVFVSSSRLSETKLPVLRSSLVSCLKRLR 134
>gi|312882240|ref|ZP_07741986.1| ribonuclease P [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370084|gb|EFP97590.1| ribonuclease P [Vibrio caribbenthicus ATCC BAA-2122]
Length = 118
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P F++ NNS PR+G V KK + RNR +R +E+ R +
Sbjct: 23 QQAHRAGSPHFTIIA--RNNSLSHPRLGLAVPKKQIKTSPARNRFKRLARESFR--NKQH 78
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D+V+IAK+ A + +E+ F + R R
Sbjct: 79 QLPNKDFVVIAKKSAQDLTNEEIFKLFDKLWHRLSRPSR 117
>gi|170783402|ref|YP_001711736.1| ribonuclease P protein component [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157972|emb|CAQ03182.1| ribonuclease P protein component [Clavibacter michiganensis subsp.
sepedonicus]
Length = 106
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 16 VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
V++G + L S+ R GF V+KK G AV RN +RRRLK
Sbjct: 11 VRRGRRTSTGTAVVSALA-GPSDAPTRFGFIVSKKVGNAVTRNLVRRRLKAVTAGLLP-T 68
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L G V+ + L V R R+
Sbjct: 69 LCPGVSIVIRVLPGMERTAWDTLQEEIASAVTRAVRT 105
>gi|295837759|ref|ZP_06824692.1| ribonuclease P protein component [Streptomyces sp. SPB74]
gi|197698915|gb|EDY45848.1| ribonuclease P protein component [Streptomyces sp. SPB74]
Length = 123
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQG 52
+ + L++R F+ + R G + L + +++ R GF V+K G
Sbjct: 2 LPSDNRLRRREDFSTAVRRGRRAGRPLLVVHLKSGSTDPHAAGESTLPVRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++R+L+ +R +L G V+ A A +L ++R
Sbjct: 62 KAVVRTSVKRKLRHLIRDRL-SLLPPGSLVVVRALPGAGDADHAQLARDLDAALKR 116
>gi|190151296|ref|YP_001969821.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189916427|gb|ACE62679.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 110
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + LR L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 6 QFKAVFEQPLRASTP-ELTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ D+V +AK + L + R+ R +
Sbjct: 65 KQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKVWARHIRLAKKPQA 110
>gi|289424482|ref|ZP_06426265.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|295131880|ref|YP_003582543.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|289155179|gb|EFD03861.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|291375994|gb|ADD99848.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|327446725|gb|EGE93379.1| ribonuclease P protein component [Propionibacterium acnes HL043PA2]
Length = 148
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G G + ++ ++ PRVGF V+K G AV RNR++RRL+ R L+
Sbjct: 55 GNCGSGEPLVSTTTSRSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCR-PLVDELED 113
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
G V+ A A P + + R
Sbjct: 114 GTVVVVRALPAAATQP-DRVAKDLDGAWHQALRKLR 148
>gi|91205682|ref|YP_538037.1| ribonuclease P [Rickettsia bellii RML369-C]
gi|157826860|ref|YP_001495924.1| ribonuclease P [Rickettsia bellii OSU 85-389]
gi|122425507|sp|Q1RI66|RNPA_RICBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226736|sp|A8GVL0|RNPA_RICB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91069226|gb|ABE04948.1| Ribonuclease P [Rickettsia bellii RML369-C]
gi|157802164|gb|ABV78887.1| ribonuclease P [Rickettsia bellii OSU 85-389]
Length = 120
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQ-GCAVE 56
I LK +++F L+ K G+ +F L + N S +G V+KK AV
Sbjct: 3 ITSLKNQKEFELINKLGKKFHEKYFILVIAKNIPKIFLESKYNIFLGIKVSKKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR+K +RL ++I ++ F L + + +
Sbjct: 63 RNKIKRRIKHLIRLICNNSNLKKLAMIIIPRKGFDTADFSVLNHELSKAI 112
>gi|187251670|ref|YP_001876152.1| ribonuclease P protein component [Elusimicrobium minutum Pei191]
gi|186971830|gb|ACC98815.1| Ribonuclease P protein component [Elusimicrobium minutum Pei191]
Length = 127
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R F + K G+ L N + LP++ V++K G A RNR +R L
Sbjct: 16 RLHLKRDFEDIFKNGKKVTHGGLVLWYRPNLGDDKLPKMAIAVSRKLGHAPLRNRTKRLL 75
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E RL + + HG +++ + I F C E ++
Sbjct: 76 REVFRLN-KYKINHGVAFIISPRESGNLINFHTTCKVVFELWQKA 119
>gi|251791871|ref|YP_003006591.1| ribonuclease P [Aggregatibacter aphrophilus NJ8700]
gi|247533258|gb|ACS96504.1| ribonuclease P protein component [Aggregatibacter aphrophilus
NJ8700]
Length = 122
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L F V + R P ++ NN PR+G TV KK A RNR
Sbjct: 7 PRELRLLTPEHFKYVFQQPFRASSPEITILARKNNLE--HPRLGLTVAKKHLKRANARNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +E+ RL + +D+V++AK+ + + L + R+
Sbjct: 65 IKRLCRESFRLSQHSL--PSYDFVIVAKQGIGRLDNRTLWQTLDKLWLRH 112
>gi|194246771|ref|YP_002004410.1| Ribonuclease P [Candidatus Phytoplasma mali]
gi|193807128|emb|CAP18566.1| Ribonuclease P [Candidatus Phytoplasma mali]
Length = 112
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
+ PFF L N N + ++ KK G A ERN ++RRL+ + ++
Sbjct: 21 KSIGNPFFVLYYSKNKNQTHF-KFALSIGKKYGKAYERNLIKRRLRMIIHE-FHILIDFK 78
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+VL+ K A + F+++ F ++++
Sbjct: 79 ISFVLVIKPKAKNLTFQQIKEDFFILLKKS 108
>gi|85057753|ref|YP_456669.1| ribonuclease P [Aster yellows witches'-broom phytoplasma AYWB]
gi|84789858|gb|ABC65590.1| ribonuclease P [Aster yellows witches'-broom phytoplasma AYWB]
Length = 128
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V K + R G F + + + +V KK G A ERN +
Sbjct: 14 MKRKYILKKENEITPVFKSKKRYGNSFFIIYYVKQTTFPHFKFALSVGKKYGKAHERNLI 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+RRL+ + + + +V++ K A + FK+L F +
Sbjct: 74 KRRLRAIISSFSPCLNPKMC-FVIVIKAPAKTLTFKQLKTFFFQ 116
>gi|322513808|ref|ZP_08066894.1| ribonuclease P protein component [Actinobacillus ureae ATCC 25976]
gi|322120376|gb|EFX92306.1| ribonuclease P protein component [Actinobacillus ureae ATCC 25976]
Length = 142
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + R L +L +N +PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 38 QFKAVFEQPFRASTP-ELTILARHNHLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 96
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ D+V +AK + L + R+ R +
Sbjct: 97 KQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWVRHIRLAKKPQA 142
>gi|68249583|ref|YP_248695.1| ribonuclease P [Haemophilus influenzae 86-028NP]
gi|145630096|ref|ZP_01785878.1| ribonuclease P [Haemophilus influenzae R3021]
gi|145632384|ref|ZP_01788119.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148828169|ref|YP_001292922.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229846056|ref|ZP_04466168.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|319775068|ref|YP_004137556.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
gi|81335988|sp|Q4QLR2|RNPA_HAEI8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226720|sp|A5UID3|RNPA_HAEIG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68057782|gb|AAX88035.1| ribonuclease P protein component [Haemophilus influenzae 86-028NP]
gi|144984377|gb|EDJ91800.1| ribonuclease P [Haemophilus influenzae R3021]
gi|144987291|gb|EDJ93821.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148719411|gb|ABR00539.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229811060|gb|EEP46777.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|317449659|emb|CBY85865.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
Length = 119
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N+ PR+G TV KK A ERNR++R ++E+ RL + +D+V +AK
Sbjct: 33 ITILARKNNLEHPRLGLTVAKKHLKRAHERNRIKRLVRESFRLSQHRL--PAYDFVFVAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ + +R+ R
Sbjct: 91 NGIGKLDNSAFAQILEKLWQRHIR 114
>gi|328905783|gb|EGG25559.1| ribonuclease P protein component [Propionibacterium sp. P08]
Length = 95
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ + PRVGF V+K G AV RNR++RRL+ R L+ G V+ A A
Sbjct: 17 RSDLGVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVNELEDGTVVVVRALPAAATQ 75
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 76 P-NRVAKDLDGAWHQALRKLR 95
>gi|306834797|ref|ZP_07467861.1| ribonuclease P [Corynebacterium accolens ATCC 49726]
gi|304569325|gb|EFM44826.1| ribonuclease P [Corynebacterium accolens ATCC 49726]
Length = 109
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
PR G V+K G AV R+R RRL+ L G D V+ A + ++L
Sbjct: 39 PRFGLIVSKAVGNAVVRHRTSRRLRHVCMTLIPK-LPAGVDVVIRALPASATATSEQLEK 97
Query: 101 HFVERVRRN 109
+ +R+
Sbjct: 98 DITKALRKQ 106
>gi|117620210|ref|YP_858700.1| ribonuclease P protein component [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166226696|sp|A0KQZ9|RNPA_AERHH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|117561617|gb|ABK38565.1| ribonuclease P protein component [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 119
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V + P +L N PR+G V KK AV RNR++R ++E+
Sbjct: 17 EHFKRVFAEPVRAASPQITLLACPNTLE--HPRLGLAVPKKALKRAVWRNRVKRVVRESF 74
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RL + D V+IAK + +EL + R R
Sbjct: 75 RLNQANL--PAIDIVVIAKAGVKEMDNEELFKLLEKLWRTLSRR 116
>gi|294138800|ref|YP_003554778.1| ribonuclease P protein component [Shewanella violacea DSS12]
gi|293325269|dbj|BAI99999.1| ribonuclease P protein component [Shewanella violacea DSS12]
Length = 118
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R +++ R
Sbjct: 16 AQFKSVFAKPIKASSA-EITLLAIPNSEQHPRIGLTVAKRFVKKAHQRNRIKRIIRDNFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + EL + R+ R Y
Sbjct: 75 LHQHEL--PPVDIVVLVRNGVVEMENAELHKLVEKLWRKLTRRY 116
>gi|303250322|ref|ZP_07336521.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650792|gb|EFL80949.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 109
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + LR L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 6 QFKAVFEQPLRASTP-ELTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 64
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ D+V +AK + L + R+ R
Sbjct: 65 KQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLAKKP 108
>gi|241895505|ref|ZP_04782801.1| ribonuclease P component protein [Weissella paramesenteroides ATCC
33313]
gi|241871251|gb|EER75002.1| ribonuclease P component protein [Weissella paramesenteroides ATCC
33313]
Length = 118
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +KK F LV + F + + R+G +++KK G ER
Sbjct: 1 MRKSYRVKKEADFQLVFEQHHSVANKMFIVYTMTREQPTHF-RLGISISKKVGLRGHERV 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V L + ++ D ++IA+ A + + +
Sbjct: 60 WVKRRIRQSV-LEFKPKMRSDLDILVIARPSAHDQDMAIIKKNLEHVFK 107
>gi|299772123|ref|YP_003734149.1| ribonuclease P protein component [Acinetobacter sp. DR1]
gi|298702211|gb|ADI92776.1| ribonuclease P protein component [Acinetobacter sp. DR1]
Length = 130
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 7 STDVRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 67 KRLARESFRLHQPNFG-SDIDIVVMPKVGIEAITNAELYQQLDFAWQKLQR 116
>gi|240950207|ref|ZP_04754494.1| ribonuclease P protein component [Actinobacillus minor NM305]
gi|240295294|gb|EER46080.1| ribonuclease P protein component [Actinobacillus minor NM305]
Length = 114
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V + P +L L N +PR+G TV KK A +RNR++R ++E+ R
Sbjct: 6 QFKAVFENPQRASTPQMTL--LAKANDAEVPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + D+V + K + L + R+ R +
Sbjct: 64 LKQHEL--PCADFVFVVKAGIGKLDNATLFETLEKLWARHIRLSKNP 108
>gi|15834787|ref|NP_296546.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270284954|ref|ZP_06194348.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270288980|ref|ZP_06195282.1| ribonuclease P [Chlamydia muridarum Weiss]
gi|301336352|ref|ZP_07224554.1| ribonuclease P [Chlamydia muridarum MopnTet14]
gi|9789792|sp|Q9PLD7|RNPA_CHLMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|8163152|gb|AAF73535.1| ribonuclease P protein component [Chlamydia muridarum Nigg]
Length = 119
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V++ G+ + +L ++ + +SN + +VG TV+KK G A +RNR
Sbjct: 6 LPKSARLLKRKQFVYVQRCGQYCRTDQATLRIVPSRHSN-IRKVGVTVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+R ++EA R + V+++ + F +L ++ + S K
Sbjct: 65 FKRIVREAFRHVRPNLPACQ---VVVSPKGGTLPNFGKLSADLLKHIPEALPLVTSSK 119
>gi|209693638|ref|YP_002261566.1| ribonuclease P [Aliivibrio salmonicida LFI1238]
gi|226741384|sp|B6EP41|RNPA_ALISL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|208007589|emb|CAQ77689.1| ribonuclease P protein component (RNase P protein) [Aliivibrio
salmonicida LFI1238]
Length = 117
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 11 RQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
+ V K P F++ L NS PR+G V KK AV RN+ +R +E+
Sbjct: 15 EDYKSVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNKFKRITRESF 72
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R + D+V+IAK+ A + ++ + R R
Sbjct: 73 R--NKQHSLPAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|145301206|ref|YP_001144047.1| ribonuclease P [Aeromonas salmonicida subsp. salmonicida A449]
gi|166226697|sp|A4STS7|RNPA_AERS4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|142853978|gb|ABO92299.1| ribonuclease P protein component [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 119
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Query: 11 RQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V + P +L N PR+G V KK AV RNR++R ++E+
Sbjct: 17 EHFKRVFAEPVRAASPQITLLACPNTLE--HPRLGLAVPKKALKRAVWRNRVKRVVRESF 74
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RL + D V+IAK + +EL + R R
Sbjct: 75 RLNQASL--PAIDIVVIAKGGVKEMDNEELFKLLEKLWRTLSRR 116
>gi|148654187|ref|YP_001281280.1| ribonuclease P protein component [Psychrobacter sp. PRwf-1]
gi|229470482|sp|A5WI39|RNPA_PSYWF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148573271|gb|ABQ95330.1| ribonuclease P protein component [Psychrobacter sp. PRwf-1]
Length = 130
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L K +F V L K ++ +L R+G +TKK AV RN +
Sbjct: 7 PKAKRLLKPAEFKPVFNQPLFKVHQTHFMAFAYDSDHLQARLGMAITKKKIPTAVARNTI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++E R + D V I K+ + +++ + + +
Sbjct: 67 KRIIREQFRHTHAQL--PALDVVFILKKSTKALSNEQMRQEISDILSKVISKQRRATA 122
>gi|237786654|ref|YP_002907359.1| ribonuclease P protein component [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759566|gb|ACR18816.1| ribonuclease P protein component [Corynebacterium kroppenstedtii
DSM 44385]
Length = 137
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 10/132 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL------PRVGFTVTKKQGCA 54
+ L++R +F +G + V+ + P VG +K G +
Sbjct: 5 LPASQRLRRRSEFRAAIRGATSGSKLVVVHVVIRSTDPATADLINGPCVGVVCSKSVGNS 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN---KR 111
V R+ + R L+ + L D V+ A+ A L + R
Sbjct: 65 VVRHTVARHLRHVAK-NLVDDLPRNVDLVIRARPAAANASHSALAEAVTYCTNKAYGKAR 123
Query: 112 SYYSGKNFSRKS 123
+ K +KS
Sbjct: 124 RREAKKAKDKKS 135
>gi|152998481|ref|YP_001343316.1| ribonuclease P protein component [Marinomonas sp. MWYL1]
gi|254808072|sp|A6W3V2|RNPA_MARMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150839405|gb|ABR73381.1| ribonuclease P protein component [Marinomonas sp. MWYL1]
Length = 132
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 3/122 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L + V K +L + R+G V+KK AV RNR+
Sbjct: 7 PRHVRLLNAGDYQSVFNDTSSKVFAGEFLLLARKRDDDQTRLGLIVSKKTDKRAVGRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++++ R + G D V +A+ + +L N + + +
Sbjct: 67 KRLVRDSFRHH--KIPLSGLDIVFLARHGIKELENADLHNRLDKAWDQLAKKALKPTQNK 124
Query: 121 RK 122
++
Sbjct: 125 KR 126
>gi|118462642|ref|YP_884422.1| ribonuclease P [Mycobacterium avium 104]
gi|254777661|ref|ZP_05219177.1| ribonuclease P [Mycobacterium avium subsp. avium ATCC 25291]
gi|166226723|sp|A0QND4|RNPA_MYCA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118163929|gb|ABK64826.1| ribonuclease P protein component [Mycobacterium avium 104]
Length = 119
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNN---NNSNLLPRVGFTVTKKQGCAVE 56
+ + + +F VK G P + + + ++ + PRVG V K G AV+
Sbjct: 2 LPARNRMTRSTEFDATVKHGTRMAQPDIVVHLRRDSEPDDESAGPRVGLVVGKAVGTAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+R+ RRL+ R + V+ A + L +RR
Sbjct: 62 RHRVARRLRHVARALLGELEPSDR-LVIRALPGSRTASSARLAQELQRCLRRM 113
>gi|53802854|ref|YP_115422.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
gi|67461353|sp|Q602M8|RNPA_METCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53756615|gb|AAU90906.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
Length = 128
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+F V + R + L VL NS PR+G +++K AV+RNR++R ++E+ RL
Sbjct: 23 EFRFVFEDACRSSDSW-LTVLARPNSLAHPRLGLALSRKQIRKAVDRNRIKRLVRESFRL 81
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ DYV++A+ A + L +
Sbjct: 82 RQAQLGT--IDYVVMARTPATSVNSAVLLRALEKHW 115
>gi|256786611|ref|ZP_05525042.1| ribonuclease P component [Streptomyces lividans TK24]
gi|289770503|ref|ZP_06529881.1| ribonuclease P [Streptomyces lividans TK24]
gi|289700702|gb|EFD68131.1| ribonuclease P [Streptomyces lividans TK24]
Length = 123
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L++R FA + R G P + + + P R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPTLVVHLRSGATDPHAPGESAPRTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + +L G V+ A A +L + R
Sbjct: 62 VAVVRNKVKRRLRHLMRDRID-LLPPGSLVVVRALPGAGDADHAQLARDLDAALAR 116
>gi|320009748|gb|ADW04598.1| ribonuclease P protein component [Streptomyces flavogriseus ATCC
33331]
Length = 123
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL--------PRVGFTVTKKQG 52
+ L++R FA+ + R G + L + ++ PR GF V+K G
Sbjct: 2 LPTENRLRRREDFAVAVRRGRRAGRPLLVVHLRSGATDPHVTGESAPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++RRL+ VR +L G V+ A + +L ++R
Sbjct: 62 GAVVRTAVKRRLRHLVRDRLA-LLPPGSLVVVRALPGSGDADHAQLAQDLDAALQR 116
>gi|293611387|ref|ZP_06693683.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826259|gb|EFF84628.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 131
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 8 STDVRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPKSRLGIVVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 68 KRLARESFRLHQPNFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|221135463|ref|ZP_03561766.1| ribonuclease P protein component [Glaciecola sp. HTCC2999]
Length = 119
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTK-KQGCAVERNRMRRRLKEAV 68
F+ V + P + +L NSN PR+G T+ K + A +RNR++R ++E+
Sbjct: 16 AHFSYVF-ADAVPAPSKHITILARKNSNYTHPRLGITIAKNRVRKAHDRNRLKRVIRESF 74
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R D ++I K + + +E ++ K+
Sbjct: 75 RHH--QHFLPNVDIIVIGKSNLDTLSNQEFNALLNTLWKKLKKR 116
>gi|154249721|ref|YP_001410546.1| ribonuclease P protein component [Fervidobacterium nodosum Rt17-B1]
gi|154153657|gb|ABS60889.1| ribonuclease P protein component [Fervidobacterium nodosum Rt17-B1]
Length = 129
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LK RR L K+G+ + +F + N R+ +V KK G A RN++RR +
Sbjct: 17 RLKLRRDITLLFKEGKSVQNEYFVIIYRKNGLD--YSRIAISVKKKFGKANRRNKLRRWV 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRR 108
+E R + K G D+++IA+++ ++ +C+ + R
Sbjct: 75 RECFRTNKYNISK-GFDFLIIARKNLSEKFDKADYRSICSSLLNVFER 121
>gi|108757732|ref|YP_635614.1| ribonuclease P protein component [Myxococcus xanthus DK 1622]
gi|108461612|gb|ABF86797.1| ribonuclease P protein component [Myxococcus xanthus DK 1622]
Length = 140
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +RR+F V++G +K P L L NS RVG TV+ K G AV R R+R
Sbjct: 19 PKALRLLQRREFLEVQEGG-QKVPSDCLLALVKRNSRPYSRVGLTVSSKVGNAVVRARLR 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
R L+E R G D VL+A+ A F L F R+ +R + + +
Sbjct: 78 RVLRELFR-KRRMQWPSGLDVVLVARSSAKDASFPALSRAFDGVTRKLQRLPRAAETKPK 136
Query: 122 KS 123
+
Sbjct: 137 EP 138
>gi|239993748|ref|ZP_04714272.1| ribonuclease P protein component [Alteromonas macleodii ATCC 27126]
Length = 124
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
VL N+ PR+G T+ KK A +RNR++R ++E+ R + D ++I K
Sbjct: 40 VLARKNTLSTPRLGITLAKKRIRKAHDRNRLKRLVRESFRHKQHNL--PNVDIIVIGKSG 97
Query: 90 ALFIPFKELCNHFVERVRRNKRS 112
A + +E+ + ++ +
Sbjct: 98 ADNLSNQEVFATLDKLWKKLNKR 120
>gi|239942673|ref|ZP_04694610.1| putative RNase P component [Streptomyces roseosporus NRRL 15998]
gi|239989132|ref|ZP_04709796.1| putative RNase P component [Streptomyces roseosporus NRRL 11379]
gi|291446134|ref|ZP_06585524.1| ribonuclease P protein component [Streptomyces roseosporus NRRL
15998]
gi|291349081|gb|EFE75985.1| ribonuclease P protein component [Streptomyces roseosporus NRRL
15998]
Length = 123
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL--------PRVGFTVTKKQG 52
+ L++R FA + R G + L + ++ PR GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGETDPHVTGETVPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++R+L+ VR L G V+ A A +L ++R
Sbjct: 62 GAVVRTAVKRKLRHLVRDRLAQ-LPPGSLVVVRALPGAGDADHAQLARDLDAALQR 116
>gi|157373145|ref|YP_001471745.1| ribonuclease P protein component [Shewanella sediminis HAW-EB3]
gi|157315519|gb|ABV34617.1| ribonuclease P protein component [Shewanella sediminis HAW-EB3]
Length = 120
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R +++ R
Sbjct: 18 AQFKSVFTKPIKASSA-EITLLAIPNSEQHPRLGLTVAKRFVKKAHQRNRIKRIIRDNFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + +L + R+ R Y
Sbjct: 77 LHQHEL--PPIDIVVLVRNGVVEMENTDLHKLVEKLWRKLNRRY 118
>gi|83591339|ref|YP_431348.1| ribonuclease P protein component [Moorella thermoacetica ATCC
39073]
gi|83574253|gb|ABC20805.1| ribonuclease P protein component [Moorella thermoacetica ATCC
39073]
Length = 93
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
N R G++++KK G AV+RNR++RRL+E R G D V++A+ A+ P+
Sbjct: 9 NQQPYTRFGYSISKKVGKAVKRNRLKRRLREICRQHLASF-HPGLDVVIVAREQAVEAPY 67
Query: 96 KELCNHFVERVRRNK 110
+EL + R K
Sbjct: 68 EELEKEVLNLGRWGK 82
>gi|262371175|ref|ZP_06064496.1| RNase P C5 component [Acinetobacter johnsonii SH046]
gi|262313905|gb|EEY94951.1| RNase P C5 component [Acinetobacter johnsonii SH046]
Length = 132
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 11 STEVRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPQSRLGIVVAKKKVRRAHERNRV 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + + D V++ K +P EL ++ +R
Sbjct: 71 KRLARESFRLHQQQLT---LDIVVMPKMGIETVPNAELHQQLQFAWQKLQR 118
>gi|50086621|ref|YP_048131.1| RNase P C5 component [Acinetobacter sp. ADP1]
gi|60390406|sp|Q6F6K8|RNPA_ACIAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49532595|emb|CAG70309.1| RNase P, protein C5 component, processes tRNA, 4. 5S RNA
[Acinetobacter sp. ADP1]
Length = 131
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
S L+ + V G P F L + L R+G V KK A ERN
Sbjct: 8 STEVRLRCAADYQGVFDGALFKVHQPHFL--FLAKPSEQLQSRLGVIVAKKKVRRAHERN 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R++R +E+ RL + + D V++ K + +L ++ +R
Sbjct: 66 RIKRLARESFRLHQQQLGL--LDIVVMPKIGIEAVSNADLHQQLEFAWQKLQR 116
>gi|317133708|ref|YP_004093022.1| ribonuclease P protein component [Ethanoligenens harbinense YUAN-3]
gi|315471687|gb|ADU28291.1| ribonuclease P protein component [Ethanoligenens harbinense YUAN-3]
Length = 148
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N L + R F +G P L N R+G T +KK G AV RNR
Sbjct: 37 MQNTISLTENRDFRRLYHRGRSMVHPCLVLYYARNRLG--CNRIGITTSKKIGKAVARNR 94
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR ++E+ R K G D V +A+ + ++ +
Sbjct: 95 ARRIIRESYRQLEPAT-KTGWDLVFVARTRTVGCKMGDVLRVMGGMFKSAC 144
>gi|157363656|ref|YP_001470423.1| ribonuclease P protein component [Thermotoga lettingae TMO]
gi|157314260|gb|ABV33359.1| ribonuclease P protein component [Thermotoga lettingae TMO]
Length = 121
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+ R F V + G + + ++ + N+ R+G V +K G A +RN+
Sbjct: 10 LRRTERLRFSRDFDRVFRFGAVIQSELLTILYVGNDLE--HNRIGVIVKRKFGKAHDRNK 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRRNK 110
+RR +KE RL + K D V++ ++ IP++E C H + ++R K
Sbjct: 68 IRRWIKEIYRLKKHDLNKS-FDIVVLPRKTLSDIFKDIPYEEFCKHLTDLLKRIK 121
>gi|329938640|ref|ZP_08288036.1| ribonuclease P component [Streptomyces griseoaurantiacus M045]
gi|329302131|gb|EGG46023.1| ribonuclease P component [Streptomyces griseoaurantiacus M045]
Length = 123
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQG 52
+ L++R FA + R G + L + ++ R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGVTDPHATGESASPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV RN+++RRL+ +R + ++ G V+ A A +L + R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRVD-LVPTGSLVVVRALPGAGEADHSQLARDLDAALGR 116
>gi|86153103|ref|ZP_01071308.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121613177|ref|YP_001000642.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005569|ref|ZP_02271327.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
gi|166226709|sp|A1VZV1|RNPA_CAMJJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85843988|gb|EAQ61198.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87248886|gb|EAQ71849.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 108
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN + ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLN----SYEKKIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ E L+ G Y+ IAK + + F L + +++
Sbjct: 57 SKRILRALFA-KFERYLQDGK-YIFIAKNEITELSFSRLEKNLKWGLKK 103
>gi|262377657|ref|ZP_06070877.1| ribonuclease P [Acinetobacter lwoffii SH145]
gi|262307416|gb|EEY88559.1| ribonuclease P [Acinetobacter lwoffii SH145]
Length = 130
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L+ + V G L K L ++ R+G V KK A ERNR++R
Sbjct: 12 RLRCAADYKGVFDGALFKVHQPHFLFLAKHSELPNSRLGLVVAKKKVRRAHERNRVKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + + D V++ K +P EL ++ R
Sbjct: 72 RESFRLHQQQL--DDLDIVIMPKMGVEAVPNAELHQQLQFAWQKLNR 116
>gi|170729249|ref|YP_001763275.1| ribonuclease P [Shewanella woodyi ATCC 51908]
gi|254808086|sp|B1KQ67|RNPA_SHEWM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169814596|gb|ACA89180.1| ribonuclease P protein component [Shewanella woodyi ATCC 51908]
Length = 119
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N+ PR+G TV K+ A +RNR++R +++ R
Sbjct: 17 AQFKSVFSKPIKASSA-EITLLAIPNTEQHPRIGLTVAKRFVKKAHQRNRIKRIIRDNFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + EL + R+ R Y
Sbjct: 76 LHQHEL--PAIDIVVLVRNGVVEMENAELHKLVEKLWRKLNRRY 117
>gi|307249015|ref|ZP_07531023.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854473|gb|EFM86668.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 100
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ L + R+ R
Sbjct: 71 GGIGKLDNATLFAMLEKLWARHIRLTKKP 99
>gi|225352377|ref|ZP_03743400.1| hypothetical protein BIFPSEUDO_03994 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156884|gb|EEG70253.1| hypothetical protein BIFPSEUDO_03994 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 120
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 9/117 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLE--------VLNNNNSNLLPRVGFTVTKKQGCAV 55
+ LK R F V K R + +++++ + RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYLVHDDAIIDDSAAMRGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR + R E L D VL AK A F L R
Sbjct: 61 TRNAVKRRFRVLAR-KYESALPESCDIVLRAKPSAAHADFLSLEQQIAACFEAVNRK 116
>gi|302035742|ref|YP_003796064.1| putative ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
gi|300603806|emb|CBK40138.1| putative Ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
Length = 122
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ R +KK G F+L++ + +++ +G + ++ G AV RNR +R +
Sbjct: 12 LKRSRDIQHIKKNGRRVSTGLFNLQICPGLSQDVM--LGIVIGRRFGTAVRRNRAKRLFR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E R ++ GH +++ KR+ L +P+ EL N + ++R + + + +
Sbjct: 70 ELGRAVRPALV-PGHAFLVFPKRECLNLPYAELQNLWRGTLQRQRLARFGEPS 121
>gi|237809903|ref|YP_002894343.1| ribonuclease P [Tolumonas auensis DSM 9187]
gi|237502164|gb|ACQ94757.1| ribonuclease P protein component [Tolumonas auensis DSM 9187]
Length = 119
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 13 FALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
F V + P +L + N+ PR+G + KK AV RNR++R+++E+ RL
Sbjct: 19 FQKVFAQPVRASSPHLTLLAIRNDL--THPRLGLAIPKKALKRAVWRNRVKRQIRESFRL 76
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ D V+IAK + +L + R R
Sbjct: 77 HQHEL--PPIDIVVIAKAPVRGLENPDLSQLLDKLWRTLARR 116
>gi|148658061|ref|YP_001278266.1| ribonuclease P protein component [Roseiflexus sp. RS-1]
gi|166226737|sp|A5V0B3|RNPA_ROSS1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148570171|gb|ABQ92316.1| ribonuclease P protein component [Roseiflexus sp. RS-1]
Length = 122
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ Q+ V++ G L N L R GF K+ G AV RNR
Sbjct: 1 MKRAYRLRTPEQYQRVRRDGRTWDAGMLMLNAAPNRR--RLSRCGFVTPKRLGGAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRRNKRSYYSGKN 118
+RRR++EAVRL ++ G D V IA+ AL I F +L + ++R S
Sbjct: 59 IRRRVREAVRLLYPQIV-PGWDIVFIARSPALAEIAFPQLQALVQQALQRAGVLQASDSG 117
Query: 119 FS 120
S
Sbjct: 118 QS 119
>gi|33151920|ref|NP_873273.1| ribonuclease P [Haemophilus ducreyi 35000HP]
gi|48474364|sp|Q7VN34|RNPA_HAEDU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33148141|gb|AAP95662.1| ribonuclease P protein component [Haemophilus ducreyi 35000HP]
Length = 123
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
QF V + R L +L N PR+G TV KK A +RNR++R ++E+ RL
Sbjct: 17 QFKAVFEQPYRASTA-ELTILARQNCVNTPRLGLTVAKKHLKRAHDRNRIKRIVRESFRL 75
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ D+V +AK + L + R+ R
Sbjct: 76 --KQHQLPNFDFVFVAKHGIGKLDNATLFATIDKLWTRHIR 114
>gi|255020156|ref|ZP_05292225.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
gi|254970298|gb|EET27791.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
Length = 114
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G R P + VL N+ R+G V++K G AV RNR++RRL+EA R
Sbjct: 29 GRKRSFPELACYVLANDRG--FARLGLAVSRKVGNAVLRNRVKRRLREAFR--QSPWRDQ 84
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVR 107
G D +++AK + ++ L +R
Sbjct: 85 GKDLMVVAKPASAQGSYQTLSMRVDAVLR 113
>gi|46397716|sp|Q7X5L4|RNPA_THEAQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908455|gb|AAO88969.1| RNase P protein subunit [Thermus aquaticus]
Length = 162
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G F S++ L RVG V+KK G AV RN+++
Sbjct: 60 RLLSLKGDRAFQRLRKGRAGRGRFVSVKWLP----APEARVGIVVSKKVGKAVVRNKVK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +L+A +A F EL V +R++
Sbjct: 115 ---RRLREILRRLHLPKAHILLVASPEAREAGFAELFQDVVRALRKS 158
>gi|119947211|ref|YP_944891.1| ribonuclease P protein component [Psychromonas ingrahamii 37]
gi|166226734|sp|A1T0M7|RNPA_PSYIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119865815|gb|ABM05292.1| ribonuclease P protein component [Psychromonas ingrahamii 37]
Length = 118
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 11 RQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
F V K + P+ +L N PR+G + KK AV RNR+RR ++E
Sbjct: 16 EDFKPVFKNAVPAVSPYLTLLARKNTLD--HPRIGMAIPKKHIKRAVGRNRIRRIVREQF 73
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R + D V+IAK + +E+ + R+
Sbjct: 74 RHQQHQL--PAIDIVVIAKAGIADLSNQEINKILDKLWRK 111
>gi|50843792|ref|YP_057019.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|50841394|gb|AAT84061.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|313806854|gb|EFS45352.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA2]
gi|313817641|gb|EFS55355.1| putative ribonuclease P protein component [Propionibacterium acnes
HL046PA2]
gi|313821534|gb|EFS59248.1| putative ribonuclease P protein component [Propionibacterium acnes
HL036PA1]
gi|313826191|gb|EFS63905.1| putative ribonuclease P protein component [Propionibacterium acnes
HL063PA1]
gi|314926335|gb|EFS90166.1| putative ribonuclease P protein component [Propionibacterium acnes
HL036PA3]
gi|314980259|gb|EFT24353.1| putative ribonuclease P protein component [Propionibacterium acnes
HL072PA2]
gi|314987114|gb|EFT31206.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA2]
gi|314990684|gb|EFT34775.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA3]
gi|315088013|gb|EFT59989.1| putative ribonuclease P protein component [Propionibacterium acnes
HL072PA1]
gi|315107500|gb|EFT79476.1| putative ribonuclease P protein component [Propionibacterium acnes
HL030PA1]
gi|327334555|gb|EGE76266.1| ribonuclease P protein component [Propionibacterium acnes HL097PA1]
gi|327444471|gb|EGE91125.1| putative ribonuclease P protein component [Propionibacterium acnes
HL013PA2]
gi|328757978|gb|EGF71594.1| putative ribonuclease P protein component [Propionibacterium acnes
HL020PA1]
gi|332676745|gb|AEE73561.1| ribonuclease P protein component [Propionibacterium acnes 266]
Length = 85
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R L+ G V+ A A
Sbjct: 7 RSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELEDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|283954519|ref|ZP_06372038.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 414]
gi|283793923|gb|EFC32673.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 414]
Length = 108
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + L+ + ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIVFYLH----SYEKKIAVVASKKVGKAVIRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ + E L+ G Y+ IAK + + F L + +++
Sbjct: 57 SKRILRALF-VKFEKYLQDGK-YIFIAKNEITELSFSRLEKNLKWGLKK 103
>gi|145221423|ref|YP_001132101.1| ribonuclease P protein component [Mycobacterium gilvum PYR-GCK]
gi|189043739|sp|A4T4T3|RNPA_MYCGI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145213909|gb|ABP43313.1| ribonuclease P protein component [Mycobacterium gilvum PYR-GCK]
Length = 124
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVTKKQGCAVERN 58
+ + + +F A V +G P L L ++ PRVG V+K G AV R+
Sbjct: 2 LPAQYRMTRSTEFGATVSRGTRAAQPDLVLYTLRSDETGEPGPRVGLIVSKAVGNAVVRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R+ RRL+ A R E + V+ A + + + R + +N
Sbjct: 62 RVSRRLRHAARGILERLDSRDR-VVIRALPRSRDAGTQRFEQELHTALDRIHARTITARN 120
Query: 119 FS 120
+
Sbjct: 121 GA 122
>gi|314965759|gb|EFT09858.1| putative ribonuclease P protein component [Propionibacterium acnes
HL082PA2]
gi|314982901|gb|EFT26993.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA3]
gi|315091207|gb|EFT63183.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA4]
gi|315094441|gb|EFT66417.1| putative ribonuclease P protein component [Propionibacterium acnes
HL060PA1]
gi|327328936|gb|EGE70696.1| ribonuclease P protein component [Propionibacterium acnes HL103PA1]
Length = 85
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R L+ G V+ A A
Sbjct: 7 RSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCR-PLVDELEDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|205356683|ref|ZP_03223444.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205345421|gb|EDZ32063.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 108
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN + ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKIGKKWHCEGVIIFYLN----SYEKKIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ E L+ G Y+ +AK + + F L + +++
Sbjct: 57 SKRILRALFA-KFERYLQDGK-YIFVAKNEITELSFSRLEKNLKWGLKK 103
>gi|322506196|gb|ADX01650.1| RNase P, RNase P C5 component [Acinetobacter baumannii 1656-2]
Length = 133
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 10 STDLRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 70 KRLARESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 119
>gi|307264649|ref|ZP_07546229.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306869961|gb|EFN01725.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 101
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ L + R+ R +
Sbjct: 71 GGIGKLDNATLFAMLEKVWARHIRLAKKPQA 101
>gi|134103816|ref|YP_001109477.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
gi|133916439|emb|CAM06552.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
Length = 147
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + P + +S+ RVGF V+K G AV R+R+ R+L+ +R L
Sbjct: 38 RPAHRAESPEADVHTAPTRDSSESTRVGFVVSKAVGSAVVRHRVARQLRHLMRDRIPA-L 96
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
G V+ A A P ++L +R+ + + + +R
Sbjct: 97 PAGTLVVVRALPPAAGAPSRDLGADLDAALRKLRLTGTRAEGAARPP 143
>gi|288957362|ref|YP_003447703.1| ribonuclease P protein [Azospirillum sp. B510]
gi|288909670|dbj|BAI71159.1| ribonuclease P protein [Azospirillum sp. B510]
Length = 128
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 3 NICILKKRRQFALVKKGELRK-GPFFSLEVLNNN------NSNLLPRVGFTVTKKQGCAV 55
+ L +R +F V + P L+V ++ + R+G T ++K G AV
Sbjct: 7 RVGRLMRRPEFLAVAGTRRKHVAPGLILQVRRHDDKQRPADGGPPIRLGLTASRKVGNAV 66
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RNR RRRL+EA R GHD+VL+A+ D P+ +L ++R
Sbjct: 67 VRNRARRRLREAARQILSVHAAPGHDFVLVARGDTAERPWTDLLGDLTAGLKR 119
>gi|90415382|ref|ZP_01223316.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2207]
gi|90332705|gb|EAS47875.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2207]
Length = 124
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L K + V + +L +L+ N R+G + KK AV RN+++R +
Sbjct: 11 RLLKSSDYTEVFDNNSVRVAHPNLLILSQPNGTETSRLGLVIGKKNVPTAVARNKIKRVV 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E RL L D V +A++D + EL + R
Sbjct: 71 RETFRLT---ELPVAVDLVFLARKDLGKLSSAELAALIRQSWGR 111
>gi|300934351|ref|ZP_07149607.1| ribonuclease P protein component [Corynebacterium resistens DSM
45100]
Length = 146
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALF 92
+S+ PRVG V+K G AV R+ + RRL+ A + G VL A A
Sbjct: 69 SSDPHPRVGLVVSKAVGNAVSRHAVSRRLRHATGALLAEIEESCPPGTTIVLRALPRAAT 128
Query: 93 IPFKELCNHFVERVRRN 109
++E+ ++R
Sbjct: 129 ATYEEILKDVHSCIKRA 145
>gi|323516072|gb|ADX90453.1| RNase P protein component [Acinetobacter baumannii TCDC-AB0715]
Length = 133
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 10 STDLRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL + D V++ K I EL ++ +R
Sbjct: 70 KRLARESFRLHQPKF-ESDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 119
>gi|169797812|ref|YP_001715605.1| RNase P C5 component [Acinetobacter baumannii AYE]
gi|238688032|sp|B0V5R2|RNPA_ACIBY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169150739|emb|CAM88651.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter baumannii AYE]
Length = 131
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 8 STDLRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 68 KRLARESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|260558091|ref|ZP_05830302.1| ribonuclease P [Acinetobacter baumannii ATCC 19606]
gi|260408445|gb|EEX01752.1| ribonuclease P [Acinetobacter baumannii ATCC 19606]
Length = 131
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 8 STDLRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 68 KRLARESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|193078406|gb|ABO13386.2| RNase P [Acinetobacter baumannii ATCC 17978]
Length = 130
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 11 RQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEA 67
+ V G P F L R+G V KK A ERNR++R +E+
Sbjct: 16 ADYKSVFDGALFKVHQPHFL--FLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLARES 73
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RL D V++ K I EL ++ +R
Sbjct: 74 FRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 116
>gi|86150663|ref|ZP_01068884.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86150795|ref|ZP_01069011.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88596311|ref|ZP_01099548.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 84-25]
gi|153951419|ref|YP_001397948.1| ribonuclease P protein component [Campylobacter jejuni subsp.
doylei 269.97]
gi|157415222|ref|YP_001482478.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81116]
gi|218562579|ref|YP_002344358.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283956366|ref|ZP_06373846.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 1336]
gi|9789793|sp|Q9PNX5|RNPA_CAMJE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226708|sp|A7H368|RNPA_CAMJD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|172047132|sp|A8FM14|RNPA_CAMJ8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85838844|gb|EAQ56112.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85841965|gb|EAQ59211.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88191152|gb|EAQ95124.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360285|emb|CAL35080.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|152938865|gb|ABS43606.1| ribonuclease P protein component [Campylobacter jejuni subsp.
doylei 269.97]
gi|157386186|gb|ABV52501.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 81116]
gi|283792086|gb|EFC30875.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 1336]
gi|284926193|gb|ADC28545.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747864|gb|ADN91134.1| Ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni M1]
gi|315928322|gb|EFV07637.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315928510|gb|EFV07814.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 305]
gi|315932547|gb|EFV11480.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 327]
Length = 108
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN + ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLN----SYEKKIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ E L+ G Y+ +AK + + F L + +++
Sbjct: 57 SKRILRALFA-KFERYLQDGK-YIFVAKNEITELSFSRLEKNLKWGLKK 103
>gi|313771068|gb|EFS37034.1| putative ribonuclease P protein component [Propionibacterium acnes
HL074PA1]
gi|313792570|gb|EFS40656.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA1]
gi|313803571|gb|EFS44753.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA2]
gi|313811767|gb|EFS49481.1| putative ribonuclease P protein component [Propionibacterium acnes
HL083PA1]
gi|313814223|gb|EFS51937.1| putative ribonuclease P protein component [Propionibacterium acnes
HL025PA1]
gi|313815415|gb|EFS53129.1| putative ribonuclease P protein component [Propionibacterium acnes
HL059PA1]
gi|313829187|gb|EFS66901.1| putative ribonuclease P protein component [Propionibacterium acnes
HL063PA2]
gi|313832761|gb|EFS70475.1| putative ribonuclease P protein component [Propionibacterium acnes
HL056PA1]
gi|313839620|gb|EFS77334.1| putative ribonuclease P protein component [Propionibacterium acnes
HL086PA1]
gi|314916211|gb|EFS80042.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA4]
gi|314921814|gb|EFS85645.1| putative ribonuclease P protein component [Propionibacterium acnes
HL050PA3]
gi|314930921|gb|EFS94752.1| putative ribonuclease P protein component [Propionibacterium acnes
HL067PA1]
gi|314955283|gb|EFS99688.1| putative ribonuclease P protein component [Propionibacterium acnes
HL027PA1]
gi|314959156|gb|EFT03258.1| putative ribonuclease P protein component [Propionibacterium acnes
HL002PA1]
gi|314975196|gb|EFT19291.1| putative ribonuclease P protein component [Propionibacterium acnes
HL053PA1]
gi|314985205|gb|EFT29297.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA1]
gi|315078991|gb|EFT51003.1| putative ribonuclease P protein component [Propionibacterium acnes
HL053PA2]
gi|315081499|gb|EFT53475.1| putative ribonuclease P protein component [Propionibacterium acnes
HL078PA1]
gi|315097164|gb|EFT69140.1| putative ribonuclease P protein component [Propionibacterium acnes
HL038PA1]
gi|315099344|gb|EFT71320.1| putative ribonuclease P protein component [Propionibacterium acnes
HL059PA2]
gi|315102315|gb|EFT74291.1| putative ribonuclease P protein component [Propionibacterium acnes
HL046PA1]
gi|315109868|gb|EFT81844.1| putative ribonuclease P protein component [Propionibacterium acnes
HL030PA2]
gi|327332498|gb|EGE74233.1| ribonuclease P protein component [Propionibacterium acnes HL096PA2]
gi|327448833|gb|EGE95487.1| putative ribonuclease P protein component [Propionibacterium acnes
HL043PA1]
gi|327454250|gb|EGF00905.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA3]
gi|327457416|gb|EGF04071.1| putative ribonuclease P protein component [Propionibacterium acnes
HL092PA1]
gi|328756008|gb|EGF69624.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA1]
gi|328758851|gb|EGF72467.1| putative ribonuclease P protein component [Propionibacterium acnes
HL025PA2]
gi|328759809|gb|EGF73400.1| ribonuclease P protein component [Propionibacterium acnes HL099PA1]
Length = 85
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R L+ G V+ A A
Sbjct: 7 RSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCR-PLVDELEDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|91795122|ref|YP_564773.1| ribonuclease P protein component [Shewanella denitrificans OS217]
gi|123060480|sp|Q12HM6|RNPA_SHEDO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91717124|gb|ABE57050.1| ribonuclease P protein component [Shewanella denitrificans OS217]
Length = 118
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N PR+G TV K+ A +RNR++R ++E+ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNIEQHPRLGLTVAKRFVKRANQRNRIKRVIRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + +L + R+ R Y
Sbjct: 75 LNQHDI--PALDIVVLVRNGVMEMENADLNKLIEKLWRKLSRRY 116
>gi|23465225|ref|NP_695828.1| ribonuclease P protein component [Bifidobacterium longum NCC2705]
gi|189440300|ref|YP_001955381.1| RNase P protein component [Bifidobacterium longum DJO10A]
gi|227547515|ref|ZP_03977564.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239622845|ref|ZP_04665876.1| ribonuclease P protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296455144|ref|YP_003662288.1| ribonuclease P protein component [Bifidobacterium longum subsp.
longum JDM301]
gi|312133634|ref|YP_004000973.1| rnpa [Bifidobacterium longum subsp. longum BBMN68]
gi|317482357|ref|ZP_07941377.1| ribonuclease P [Bifidobacterium sp. 12_1_47BFAA]
gi|322690181|ref|YP_004209915.1| ribonuclease P [Bifidobacterium longum subsp. infantis 157F]
gi|322692116|ref|YP_004221686.1| ribonuclease P [Bifidobacterium longum subsp. longum JCM 1217]
gi|29427810|sp|Q8G6J8|RNPA_BIFLO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808047|sp|B3DP24|RNPA_BIFLD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23325854|gb|AAN24464.1| ribonuclease P protein component [Bifidobacterium longum NCC2705]
gi|189428735|gb|ACD98883.1| RNase P protein component [Bifidobacterium longum DJO10A]
gi|227212030|gb|EEI79926.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239514842|gb|EEQ54709.1| ribonuclease P protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296184577|gb|ADH01459.1| ribonuclease P protein component [Bifidobacterium longum subsp.
longum JDM301]
gi|311772892|gb|ADQ02380.1| RnpA [Bifidobacterium longum subsp. longum BBMN68]
gi|316916237|gb|EFV37639.1| ribonuclease P [Bifidobacterium sp. 12_1_47BFAA]
gi|320456972|dbj|BAJ67594.1| ribonuclease P [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461517|dbj|BAJ72137.1| ribonuclease P [Bifidobacterium longum subsp. infantis 157F]
Length = 119
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLE-------VLNNNNSNLLPRVGFTVTKKQGCAVE 56
+ L+ R F V K + G + ++++ + R+G V+K G AV
Sbjct: 1 MERLQSHRDFVTVLKRRRKAGGKDIVVHYLVPDDHHDDDDRTVHRRLGLAVSKSVGHAVT 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RN ++RR + R E +L D VL AK A F L +
Sbjct: 61 RNTVKRRFRVLARAH-EDLLPAHCDIVLRAKPSAATASFASLDQQIAKAFA 110
>gi|291005726|ref|ZP_06563699.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
Length = 134
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + P + +S+ RVGF V+K G AV R+R+ R+L+ +R L
Sbjct: 25 RPAHRAESPEADVHTAPTRDSSESTRVGFVVSKAVGSAVVRHRVARQLRHLMRDRIPA-L 83
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
G V+ A A P ++L +R+ + + + +R
Sbjct: 84 PAGTLVVVRALPPAAGAPSRDLGADLDAALRKLRLTGTRAEGAARPP 130
>gi|184156327|ref|YP_001844666.1| RNase P protein component [Acinetobacter baumannii ACICU]
gi|213155392|ref|YP_002317437.1| ribonuclease P protein component [Acinetobacter baumannii AB0057]
gi|215485159|ref|YP_002327400.1| ribonuclease P protein component [Acinetobacter baumannii
AB307-0294]
gi|239503911|ref|ZP_04663221.1| RNase P C5 component [Acinetobacter baumannii AB900]
gi|301345947|ref|ZP_07226688.1| ribonuclease P protein component [Acinetobacter baumannii AB056]
gi|301510084|ref|ZP_07235321.1| ribonuclease P protein component [Acinetobacter baumannii AB058]
gi|301594678|ref|ZP_07239686.1| ribonuclease P protein component [Acinetobacter baumannii AB059]
gi|332854711|ref|ZP_08435498.1| ribonuclease P protein component [Acinetobacter baumannii 6013150]
gi|332865591|ref|ZP_08436431.1| ribonuclease P protein component [Acinetobacter baumannii 6013113]
gi|183207921|gb|ACC55319.1| RNase P protein component [Acinetobacter baumannii ACICU]
gi|213054552|gb|ACJ39454.1| ribonuclease P protein component [Acinetobacter baumannii AB0057]
gi|213987026|gb|ACJ57325.1| ribonuclease P protein component [Acinetobacter baumannii
AB307-0294]
gi|332727868|gb|EGJ59270.1| ribonuclease P protein component [Acinetobacter baumannii 6013150]
gi|332735243|gb|EGJ66320.1| ribonuclease P protein component [Acinetobacter baumannii 6013113]
Length = 130
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 7 STDLRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 67 KRLARESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 116
>gi|32034083|ref|ZP_00134327.1| COG0594: RNase P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209397|ref|YP_001054622.1| ribonuclease P [Actinobacillus pleuropneumoniae L20]
gi|307246877|ref|ZP_07528942.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251212|ref|ZP_07533133.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253631|ref|ZP_07535498.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255859|ref|ZP_07537660.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260312|ref|ZP_07542019.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262441|ref|ZP_07544086.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126098189|gb|ABN75017.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|306852162|gb|EFM84402.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856728|gb|EFM88863.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858867|gb|EFM90913.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861127|gb|EFM93120.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865563|gb|EFM97444.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306867818|gb|EFM99649.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 100
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ L + R+ R
Sbjct: 71 GGIGKLDNATLFAMLEKLWARHIRLAKKP 99
>gi|153007345|ref|YP_001381670.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
gi|152030918|gb|ABS28686.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
Length = 170
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ VL ++ PR+G TV+ K AVERNR++R ++E R + + V+IA+
Sbjct: 86 VLVLALDSRGTRPRIGITVSSKIANAVERNRVKRWVREEFRAMQGDL--PAVNLVVIARA 143
Query: 89 DALFIPFKEL 98
L E+
Sbjct: 144 GVLAAGRAEV 153
>gi|308179189|ref|YP_003918595.1| ribonuclease P protein component [Arthrobacter arilaitensis Re117]
gi|307746652|emb|CBT77624.1| ribonuclease P protein component [Arthrobacter arilaitensis Re117]
Length = 117
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
V+ G L + R GF V+K G AV+RN +RR++E ++
Sbjct: 17 TVRSGVRSGRRNVVLYARHRETEEFQGDRFGFIVSKAVGIAVKRNLTKRRMREIAQVLRR 76
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D+V+ A A + ++EL + + R
Sbjct: 77 VDG--DVDFVVRALPGAAELSWEELNSQINSALAAVLRK 113
>gi|90413738|ref|ZP_01221726.1| ribonuclease P [Photobacterium profundum 3TCK]
gi|90325207|gb|EAS41704.1| ribonuclease P [Photobacterium profundum 3TCK]
Length = 118
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
++ P ++ L N PR+G V KK A RN +R ++E+ RL +
Sbjct: 23 QQAHRAGSPHLTI--LARPNDLNHPRLGLAVPKKQIKTAPGRNHFKRIVRESFRLKQHDL 80
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+D+V+IAK+ A + +EL + R R
Sbjct: 81 --PANDFVVIAKKSASELSNEELFKLLDKLWHRLSRPSR 117
>gi|127514793|ref|YP_001095990.1| ribonuclease P protein component [Shewanella loihica PV-4]
gi|126640088|gb|ABO25731.1| ribonuclease P protein component [Shewanella loihica PV-4]
Length = 120
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N PR+G TV K+ A +RNR++R ++++ R
Sbjct: 18 AQFKSVFSNPIKASSA-EITLLAIPNELQHPRIGLTVAKRYVKRANQRNRVKRIIRDSFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + L + L + R+ R Y
Sbjct: 77 LHQHEL--PPLDIVVLVRNGVLEMDNAALHKQVEKLWRKLSRRY 118
>gi|317494665|ref|ZP_07953077.1| ribonuclease P [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917267|gb|EFV38614.1| ribonuclease P [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 81
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 36 NSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N+ PR+G TV KK A ERNR++R +E+ RL + D+V+IAK+ +
Sbjct: 2 NTLGHPRIGLTVAKKYVKRAHERNRIKRLTRESFRLSQHSL--PAMDFVVIAKKGVQELD 59
Query: 95 FKELCNHFVERVRRNKRSYY 114
+ L + RR+ R
Sbjct: 60 NRALTEILEKLWRRHCRQAR 79
>gi|332873305|ref|ZP_08441260.1| ribonuclease P protein component [Acinetobacter baumannii 6014059]
gi|332738511|gb|EGJ69383.1| ribonuclease P protein component [Acinetobacter baumannii 6014059]
Length = 130
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
+ V G L K L R+G V KK A ERNR++R +E+ R
Sbjct: 16 ADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLARESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L D V++ K I EL ++ +R
Sbjct: 76 LHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 116
>gi|260890878|ref|ZP_05902141.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
gi|260859431|gb|EEX73931.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
Length = 81
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 3 NICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+I +KK + F+ + K + + + + N N+ R GF +KK G AV+RNR++
Sbjct: 2 SINKIKKSKDFSSIYNKSQKMHTKYAIIFIKENVNNEQ--RFGFVASKKTGNAVQRNRIK 59
Query: 62 RRLKEAVRLCAEGVLK 77
R KE V++ + K
Sbjct: 60 RIFKEFVKIHKDKFKK 75
>gi|283781965|ref|YP_003372720.1| ribonuclease P protein component [Pirellula staleyi DSM 6068]
gi|283440418|gb|ADB18860.1| ribonuclease P protein component [Pirellula staleyi DSM 6068]
Length = 152
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ +F V + L + ++ R+G ++++K G AV RNR +
Sbjct: 38 PKSLRLQTPAEFDAVFATRVFAADD-QLIMHAAKSTLPFARLGLSISRKVGNAVVRNRWK 96
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC-NHFVERVRRNKRSYYSGK 117
R ++EA R + L G D L+A+ P +L V+ +R + G
Sbjct: 97 RLIREAFR-QRQHQLPPGID--LVARPQKGASPNLQLLERSIVDLAKRCLKRAERGP 150
>gi|256545948|ref|ZP_05473303.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
gi|256398370|gb|EEU11992.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
Length = 116
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN PR GF+++KK G A +RN+
Sbjct: 1 MEKQFSLRKNVDFERVYKKSKHYYNRDFTVFI--KNNGVNRPRFGFSISKKIGKANQRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++RRL+ V + I K+ +++L + + + +
Sbjct: 59 LKRRLRAIVYENYRNINNVDIII--IPKKHTTDFTYQKLKSSLGHVLSKAFKDKK 111
>gi|120600876|ref|YP_965450.1| ribonuclease P [Shewanella sp. W3-18-1]
gi|146295082|ref|YP_001185506.1| ribonuclease P [Shewanella putrefaciens CN-32]
gi|166228248|sp|A4YCM4|RNPA_SHEPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228250|sp|A1RQF1|RNPA_SHESW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120560969|gb|ABM26896.1| ribonuclease P protein component [Shewanella sp. W3-18-1]
gi|145566772|gb|ABP77707.1| ribonuclease P protein component [Shewanella putrefaciens CN-32]
gi|319428595|gb|ADV56669.1| ribonuclease P protein component [Shewanella putrefaciens 200]
Length = 118
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R ++++ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRIIRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + E+ + R+ R Y
Sbjct: 75 LNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRRY 116
>gi|226362893|ref|YP_002780673.1| ribonuclease P [Rhodococcus opacus B4]
gi|254808084|sp|C1B7S5|RNPA_RHOOB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226241380|dbj|BAH51728.1| ribonuclease P protein component [Rhodococcus opacus B4]
Length = 125
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCA 54
+ L++ F V++G + + ++ L PR G V+K G A
Sbjct: 2 LPEPHRLRRHSDFSLTVRRGRRMGRRDLVVHAFDRAQADELVSSGGPRFGLVVSKAVGPA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V R+R+ RRL+ + + G D V+ A A ++L + R
Sbjct: 62 VIRHRVARRLRHIC-IDLVDSVPRGTDVVIRALPGAATASSRDLEKQLRAGLLR 114
>gi|226309518|ref|YP_002769480.1| ribonuclease P protein component [Rhodococcus erythropolis PR4]
gi|259494113|sp|C0ZVP7|RNPA_RHOE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226188637|dbj|BAH36741.1| ribonuclease P protein component [Rhodococcus erythropolis PR4]
Length = 126
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 8/116 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGC 53
+ L++ F V++G + + +N PR G V+K G
Sbjct: 2 LPEPSRLRRHADFSVAVRRGRRMGRRDLVVHAFDREQVEALVVTNHGPRFGLIVSKAVGP 61
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R+R+ RRL+ G + D V+ A A EL + +
Sbjct: 62 AVIRHRVARRLRHICA-DFVGQVSPETDVVIRALPGAATASSAELAKQLRGGLTKM 116
>gi|24371606|ref|NP_715648.1| ribonuclease P protein component [Shewanella oneidensis MR-1]
gi|29427754|sp|Q8EKT4|RNPA_SHEON RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24345356|gb|AAN53093.1|AE015452_6 ribonuclease P protein component [Shewanella oneidensis MR-1]
Length = 118
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R ++++ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRVIRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + EL + R+ R Y
Sbjct: 75 LNQHNI--PHLDIVVLVRNGVMEMENAELNKLIEKLWRKLSRRY 116
>gi|67921806|ref|ZP_00515323.1| ribonuclease P protein [Crocosphaera watsonii WH 8501]
gi|67856398|gb|EAM51640.1| ribonuclease P protein [Crocosphaera watsonii WH 8501]
Length = 96
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L + + + G +V++K AV RNR++R++K +R+ ++K G+ V++
Sbjct: 3 VLSKADQQPTTPPTQFGISVSRKVSKKAVTRNRLKRQIKGVIRVFLP-MIKPGYQVVIVV 61
Query: 87 KRDALFIPFKELCNHFVERVRRNK 110
KR+A ++ E + + +
Sbjct: 62 KRNATECKYEHFLRELEELLIKAE 85
>gi|256833765|ref|YP_003162492.1| ribonuclease P protein component [Jonesia denitrificans DSM 20603]
gi|256687296|gb|ACV10189.1| ribonuclease P protein component [Jonesia denitrificans DSM 20603]
Length = 91
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VGF V+K G AV RN+++RRL+ R +L G V+ A A ++ L +
Sbjct: 18 VGFVVSKAVGNAVTRNKVKRRLRAITREHL-NLLHPGEVLVVRALPTAATARYELLERDY 76
Query: 103 VERVRRNKRSYYSGKN 118
V V R +
Sbjct: 77 VRLVS-MCRHKRGARA 91
>gi|114565215|ref|YP_752729.1| ribonuclease P protein component [Shewanella frigidimarina NCIMB
400]
gi|122298222|sp|Q07VS4|RNPA_SHEFN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114336508|gb|ABI73890.1| ribonuclease P protein component [Shewanella frigidimarina NCIMB
400]
Length = 118
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R ++++ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNSEQHPRLGLTVAKRFVKRANQRNRIKRVIRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + EL + R+ R Y
Sbjct: 75 LHQHDI--PDIDIVVLVRNGVMEMENAELHKLIEKLWRKLSRRY 116
>gi|254000531|ref|YP_003052594.1| ribonuclease P [Methylovorus sp. SIP3-4]
gi|253987210|gb|ACT52067.1| ribonuclease P protein component [Methylovorus sp. SIP3-4]
Length = 125
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 4/120 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
+ + K F+ V R + L + NS PR+G V KK AV+RN M
Sbjct: 9 PSRVRIIKTDDFSSVFNFRKRISGHY-LAIHYQYNSLDTPRLGLIVGKKIAKRAVDRNYM 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R L+E RL + D V+ +R + L F E +++ + K+ S
Sbjct: 68 KRVLREQFRLHQHDIA--SLDLVVRVQRAYEPGDYPSLVGEFCELLQKLGKQIEKRKSMS 125
>gi|302531356|ref|ZP_07283698.1| ribonuclease P protein component [Streptomyces sp. AA4]
gi|302440251|gb|EFL12067.1| ribonuclease P protein component [Streptomyces sp. AA4]
Length = 110
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
R GF V+K G +V R+R+ RRL+ V G L G V+ A A EL
Sbjct: 12 AARAGFVVSKAVGNSVVRHRVTRRLRHLVSARL-GTLPAGSSLVVRALPPAATASSAELG 70
Query: 100 NHFVERVRR---NKRSYYSGKNFSRKS 123
+RR +G + R+
Sbjct: 71 ADLDAALRRLGLAPSGRPAGADAPRQP 97
>gi|313900922|ref|ZP_07834412.1| ribonuclease P protein component [Clostridium sp. HGF2]
gi|312954342|gb|EFR36020.1| ribonuclease P protein component [Clostridium sp. HGF2]
Length = 108
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++FA + + P F++ V RVG +V KK G AV RN+
Sbjct: 1 MKKEYRVKKSQEFAEIMNYKKFYTCPSFAIYVKPRKED--HARVGISVGKKMGKAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ V+ K D +++ + + V++ K
Sbjct: 59 IKRQVRMMVQDIYSFEEK--FDTIILVRVKYHEENYINNKKLLERLVKKVK 107
>gi|57237788|ref|YP_179036.1| ribonuclease P protein component [Campylobacter jejuni RM1221]
gi|148926119|ref|ZP_01809805.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8486]
gi|67461262|sp|Q5HUJ9|RNPA_CAMJR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|57166592|gb|AAW35371.1| ribonuclease P protein component [Campylobacter jejuni RM1221]
gi|145845598|gb|EDK22690.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8486]
gi|315058401|gb|ADT72730.1| Ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni S3]
Length = 108
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN + ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKIGKKWHCEGVIIFYLN----SYEKKIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L+ E L+ G Y+ +AK + + F L + +++
Sbjct: 57 SKRILRALFA-KFERYLRDGK-YIFVAKNEITELSFSRLEKNLKWGLKK 103
>gi|46397714|sp|Q7X5L0|RNPA_THEOS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908461|gb|AAO88973.1| RNase P protein subunit [Thermus oshimai]
Length = 151
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK F +++G +G + ++ L RVG V+KK G V RNR++
Sbjct: 53 LKGDSAFRRLRQGRTGRGRYVTVRWLP----APELRVGIVVSKKVGKTVVRNRVK----R 104
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +L+A +A F EL ++++
Sbjct: 105 RLREILRRLHLPRAHLLLVATPEAREAGFAELFQDLTRALKKS 147
>gi|42525233|ref|NP_970613.1| ribonuclease P protein component [Bdellovibrio bacteriovorus HD100]
gi|39577444|emb|CAE81267.1| ribonuclease P protein component [Bdellovibrio bacteriovorus HD100]
Length = 119
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ ++K+ +F +K+ R P L + N R G T ++K G AV RN+++
Sbjct: 4 NSAQVIKRSSEFLSLKQSGKRHWPTKWLLLNYQKNQVGQLRFGVTASRKTGSAVVRNKLK 63
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
R +E R D LI K FV+ + R +
Sbjct: 64 RWTREYFRSFLVAGQTLEADINLIFKPMEANFYKGLSHEEFVKAMDRGLETLRK 117
>gi|307258044|ref|ZP_07539796.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863407|gb|EFM95338.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 100
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L +N+ +PR+G TV KK A +RNR++R ++E+ RL + D+V +AK
Sbjct: 13 LTILARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PSADFVFVAK 70
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ L + R+ R
Sbjct: 71 GGIGKLDNATLFAMLEKLWTRHIRLAKKP 99
>gi|293364062|ref|ZP_06610798.1| ribonuclease P protein component [Mycoplasma alligatoris A21JP2]
gi|292552552|gb|EFF41326.1| ribonuclease P protein component [Mycoplasma alligatoris A21JP2]
Length = 112
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F L+++ + F ++ +VG TV KK AV RN
Sbjct: 1 MKKQYRLQKNWEFNDLIRRNKQFSNNFLVAYYQKADS----LKVGITVPKKFANAVWRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+L+ + + + + +V I +++ L F + + + K
Sbjct: 57 YKRQLRAII--HQANIYELNYHFVFIVRKEFLNADFALKKESIQKMLEKFK 105
>gi|120407006|ref|YP_956835.1| ribonuclease P [Mycobacterium vanbaalenii PYR-1]
gi|166226727|sp|A1TI29|RNPA_MYCVP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119959824|gb|ABM16829.1| ribonuclease P protein component [Mycobacterium vanbaalenii PYR-1]
Length = 119
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Query: 6 ILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ + +F A V KG P + L ++ ++ PRVG V+K G AV+R+R+ RR
Sbjct: 7 RMTRSTEFGATVSKGTRAAQPDVVVYRLRSDQTADPGPRVGLIVSKAVGNAVQRHRVSRR 66
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+ A E + V+ A + L + R ++ +
Sbjct: 67 LRHAALAVLEDLDPSDR-VVIRALPRSRDAVTPRLEQELRTALERIRQRTGAP 118
>gi|113972269|ref|YP_736062.1| ribonuclease P [Shewanella sp. MR-4]
gi|114049518|ref|YP_740068.1| ribonuclease P [Shewanella sp. MR-7]
gi|117918467|ref|YP_867659.1| ribonuclease P [Shewanella sp. ANA-3]
gi|123324469|sp|Q0HD62|RNPA_SHESM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123325560|sp|Q0HPE4|RNPA_SHESR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228249|sp|A0KR34|RNPA_SHESA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|113886953|gb|ABI41005.1| ribonuclease P protein component [Shewanella sp. MR-4]
gi|113890960|gb|ABI45011.1| ribonuclease P protein component [Shewanella sp. MR-7]
gi|117610799|gb|ABK46253.1| ribonuclease P protein component [Shewanella sp. ANA-3]
Length = 118
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L NS PR+G TV K+ A +RNR++R ++++ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRVIRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + E+ + R+ R Y
Sbjct: 75 LNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRRY 116
>gi|269958612|ref|YP_003328399.1| hypothetical protein ACIS_00460 [Anaplasma centrale str. Israel]
gi|269848441|gb|ACZ49085.1| hypothetical protein ACIS_00460 [Anaplasma centrale str. Israel]
Length = 124
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP----RVGFTVTKKQGCAV 55
+ + LKKRR+F+ + G L+ + + RVGFTV+KK G +V
Sbjct: 3 LRGVVTLKKRREFSHARFSGRSASSGGLLLQAVEDPAGPSGSAGLVRVGFTVSKKSGNSV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RNR+RRRL+ + G YV ++ + +L + V ++R K +
Sbjct: 63 VRNRIRRRLRVVAQDVISASAARGFCYVFVSSSRLSYAKVSDLRSSLVSCLKRLKLYTPA 122
Query: 116 GK 117
Sbjct: 123 SD 124
>gi|260424966|ref|ZP_05779067.1| ribonuclease P protein component [Dialister invisus DSM 15470]
gi|260403761|gb|EEW97308.1| ribonuclease P protein component [Dialister invisus DSM 15470]
Length = 84
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+GF TK+ G AV RNR RR +KE RL L ++ +L+A + E
Sbjct: 12 RIGFVTTKRIGNAVARNRARRLMKEVYRLH-RHELSSHYEAILLAAAFLTTATYSEAEKA 70
Query: 102 FVERVRRN 109
+ R+
Sbjct: 71 LLALWRKA 78
>gi|226229340|ref|YP_002763446.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
gi|226092531|dbj|BAH40976.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
Length = 106
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
S+E + RVGF V + + AV RNR++RRL+E VRL D VL
Sbjct: 5 SMEARTTASLLAFARVGFVVPRYKHSAVARNRLKRRLRELVRLYVLPTA-PACDVVLRVV 63
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGK 117
A PF+ L + R R +
Sbjct: 64 PSAYDRPFEALREEVQQLAARLARLHVVPP 93
>gi|212697390|ref|ZP_03305518.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325846384|ref|ZP_08169353.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|212675582|gb|EEB35189.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325481568|gb|EGC84608.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 116
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN PR GF+++KK G A +RN+
Sbjct: 1 MEKQFSLRKNVDFERVYKKSKHYYNRDFTVFI--KNNGVNRPRFGFSISKKIGKANQRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++RRL+ V + I K+ +++L + + + +
Sbjct: 59 LKRRLRAIVYDNYRNINNVDIII--IPKKHTTDFTYQKLKSSLGHVLSKAFKDKK 111
>gi|40062652|gb|AAR37573.1| ribonuclease P protein component [uncultured marine bacterium 313]
Length = 121
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAV 55
M L + +QF + K + +FS+ N N + + F + K G AV
Sbjct: 1 MIKFKSLNRSKQFIRILKKKRLNAKYFSIYFEKNLSNVKKNDKKILNISFVIKKNVGNAV 60
Query: 56 ERNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RN+++R+LK AV+ L + + + YV+ + F+ + + + +R K+
Sbjct: 61 IRNKIKRKLKSAVQKVLKEKQPIDLNYTYVIFGRNSVYKDKFQLIFDEVNDMFKRIKQ 118
>gi|38234913|ref|NP_940680.1| ribonuclease P [Corynebacterium diphtheriae NCTC 13129]
gi|60390471|sp|Q6NE96|RNPA_CORDI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|38201178|emb|CAE50903.1| Putative ribonuclease P [Corynebacterium diphtheriae]
Length = 119
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCA 54
+ + L QF ++KG+ L + L PR G V+K G A
Sbjct: 2 LPSQHKLSNSEQFRATIRKGKRAGRSTVVLHFYAEATAGNLATAGGPRFGLVVSKAVGNA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
V R+R+ R+L+ V + + V+ A A +EL + + R
Sbjct: 62 VTRHRVSRQLRHVV-IAMKDQFPASSHVVVRALPPAATASSEELRADVQAALDKLNRKR 119
>gi|284034941|ref|YP_003384872.1| ribonuclease P protein component [Kribbella flavida DSM 17836]
gi|283814234|gb|ADB36073.1| ribonuclease P protein component [Kribbella flavida DSM 17836]
Length = 119
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL------LPRVGFTVTKKQGCAVERNR 59
L++ F + R G + + + + RVGF V+K G AV RNR
Sbjct: 7 RLRRSDDFRRAVRSGRRAGRRAVVVHFFSGSGDQAGTADEPARVGFVVSKAVGNAVLRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ RRL+ + L G V+ A + + EL + +RR
Sbjct: 67 VHRRLRAVLASRLTE-LPAGSLTVVRALPASASASYAELVDDVDAALRRVLVPR 119
>gi|315446825|ref|YP_004079704.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
gi|315265128|gb|ADU01870.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
Length = 124
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVTKKQGCAVERN 58
+ + + +F A V +G P L L ++ PRVG V+K G AV R+
Sbjct: 2 LPAQYRMTRSTEFGATVSRGTRAAQPDLVLYTLRSDETGAPGPRVGLIVSKAVGNAVVRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R+ RRL+ A R E + V+ A + + + R + +N
Sbjct: 62 RVSRRLRHAARGILERLDSRDR-VVIRALPRSRDAGTQRFEQELHTALDRIHARTITARN 120
Query: 119 FS 120
+
Sbjct: 121 GA 122
>gi|291278769|ref|YP_003495604.1| ribonuclease P protein component [Deferribacter desulfuricans SSM1]
gi|290753471|dbj|BAI79848.1| ribonuclease P protein component [Deferribacter desulfuricans SSM1]
Length = 115
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++K+++F V + S GF V+KK AV RN++
Sbjct: 6 KKYERIRKKKEFEHVFSSGRWLNSKYVDICYAFGQSRKA---GFIVSKKISKKAVIRNKV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R+L+E RL + L +++AK+ + + +L N
Sbjct: 63 KRKLREIYRLN-KHSLPDNLQLIIVAKKGVDKLKYSDLENEIKTLF 107
>gi|260881792|ref|ZP_05405232.2| ribonuclease P protein component [Mitsuokella multacida DSM 20544]
gi|260847898|gb|EEX67905.1| ribonuclease P protein component [Mitsuokella multacida DSM 20544]
Length = 104
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGF KK GCAV RNR++R L+EA RL + ++ +L+ ++ + + +
Sbjct: 4 RVGFAAGKKLGCAVTRNRVKRLLREAYRLNQDR-VREDAALLLVGRKPIVDAKCQAVEQA 62
Query: 102 FVE 104
F++
Sbjct: 63 FLQ 65
>gi|71894023|ref|YP_279469.1| ribonuclease P protein component [Mycoplasma hyopneumoniae J]
gi|72081004|ref|YP_288062.1| ribonuclease P protein component [Mycoplasma hyopneumoniae 7448]
gi|123644592|sp|Q4A750|RNPA_MYCH7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123645364|sp|Q4A913|RNPA_MYCHJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71852150|gb|AAZ44758.1| ribonuclease P protein component [Mycoplasma hyopneumoniae J]
gi|71914128|gb|AAZ54039.1| ribonuclease P protein component [Mycoplasma hyopneumoniae 7448]
Length = 112
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M I +KK +F + + + + + ++ +G +V KK AV+RN
Sbjct: 1 MQKIRSIKKNWEFQAIINKKNQIVTNYLIFYYVKSD---FFEIGISVPKKFANAVKRNYY 57
Query: 61 RRRLKEAVRLCA-EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R++K A+ + +G + VLIA+++ L + F+ + + KR+
Sbjct: 58 KRQIKNALYILWKKGEIFLNFRVVLIARKNFLPLSFETKYQKLAKIFKELKRNEK 112
>gi|62185409|ref|YP_220194.1| ribonuclease P [Chlamydophila abortus S26/3]
gi|81312441|sp|Q5L548|RNPA_CHLAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|62148476|emb|CAH64246.1| putative ribonuclease P protein component [Chlamydophila abortus
S26/3]
Length = 139
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KRRQF + + R + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRRQFLYISRAGSRCQGSQVIFHVAPSKYPGCCKLGITVSKKFGKANKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA RL + V++ K F+EL F +++
Sbjct: 66 KRIVREAFRL--KRHSLPSCQIVVMPKNK-HRPKFEELLQDFTQQI 108
>gi|15839370|ref|NP_300058.1| ribonuclease P [Xylella fastidiosa 9a5c]
gi|9108027|gb|AAF85566.1|AE004083_5 ribonuclease P [Xylella fastidiosa 9a5c]
Length = 142
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 27 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 83
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 84 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRR 118
>gi|309778006|ref|ZP_07672948.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
3_1_53]
gi|308914295|gb|EFP60093.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
3_1_53]
Length = 113
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++FA + + P F++ V RVG +V KK G AV RN+
Sbjct: 1 MKKEYRVKKSQEFAEIMNYKKFYTCPSFAIYVKPRKED--HARVGISVGKKMGKAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ V+ D +++ + + N + + +++ K
Sbjct: 59 IKRQVRMMVQDIYTFN--ENFDTIILVRVKYHEENYINNKNSWKDWLKKLK 107
>gi|56416975|ref|YP_154049.1| hypothetical protein AM881 [Anaplasma marginale str. St. Maries]
gi|56388207|gb|AAV86794.1| hypothetical protein AM881 [Anaplasma marginale str. St. Maries]
Length = 119
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAVERN 58
+ LKKR +FA + G L+ + + S+ L RVGFTV+KK G +V RN
Sbjct: 1 MVTLKKREEFARARFSGRSASSKGLLLQAVEDSAHPPGSDGLVRVGFTVSKKSGNSVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+RRRL+ + G YV ++ L + V ++R +
Sbjct: 61 RIRRRLRVIAQDVISTSAARGFCYVFVSSSRLSETKLPVLRSSLVSCLKRLR 112
>gi|111020653|ref|YP_703625.1| ribonuclease P [Rhodococcus jostii RHA1]
gi|123340330|sp|Q0SAG9|RNPA_RHOSR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110820183|gb|ABG95467.1| ribonuclease P [Rhodococcus jostii RHA1]
Length = 125
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCA 54
+ L++ F V++G + + ++ L PR G V+K G A
Sbjct: 2 LPEPHRLRRHSDFSMTVRRGRRMGRRDLVVHAFDRAQADELVSSGGPRFGLVVSKAVGPA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V R+R+ RRL+ + V+ G D V+ A A ++L + R
Sbjct: 62 VIRHRVARRLRHIC-IDLVDVVPRGTDVVIRALPGAATASSRDLEKQLRAGLLR 114
>gi|88798541|ref|ZP_01114125.1| ribonuclease P [Reinekea sp. MED297]
gi|88778641|gb|EAR09832.1| ribonuclease P [Reinekea sp. MED297]
Length = 120
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V K P +L +NS PR+GF ++KK AV+RNR++R +E +R
Sbjct: 17 AQFRTVFDQVDVKAPAEHCLLLARHNSENRPRLGFILSKKNVRLAVQRNRIKRYAREYLR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L + + D + + ++ + EL ++ + R S
Sbjct: 77 LHQQEL--PPLDIIFMGRKGLGSLSDAELHRLVRKQFEKLSRRARS 120
>gi|213693344|ref|YP_002323930.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|254808048|sp|B7GPF7|RNPA_BIFLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|213524805|gb|ACJ53552.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459525|dbj|BAJ70146.1| ribonuclease P [Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 119
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 8/111 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLE-------VLNNNNSNLLPRVGFTVTKKQGCAVE 56
+ L+ R F V K + G + ++++ + R+G V+K G AV
Sbjct: 1 MERLQSHRDFVTVLKRRRKAGGKDIVVHYLVPDDHHDDDDRTVHRRLGLAVSKSVGHAVT 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RN ++RR + R E +L D VL AK A F L +
Sbjct: 61 RNTVKRRFRVLARAH-EDLLPAHCDIVLRAKPSAATASFVSLDQQIAKAFA 110
>gi|21672308|ref|NP_660375.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|266949|sp|P29433|RNPA_BUCAP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|144147|gb|AAA73147.1| rnpA [Buchnera aphidicola]
gi|2827012|gb|AAC38104.1| RNase P protein component [Buchnera aphidicola]
gi|21622907|gb|AAM67586.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 114
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
F V K F + +L +N PR+G ++++K A RN+++R ++E RL
Sbjct: 18 FQYVFSNPCNKNT-FHINILGRSNLLGHPRLGLSISRKNIKHAYRRNKIKRLIRETFRLL 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++ D+V+IAK++ +++ K++ N +R
Sbjct: 77 QHRLI--SMDFVVIAKKNIVYLNNKKIVNILEYIWSNYQR 114
>gi|257785166|ref|YP_003180383.1| ribonuclease P protein component [Atopobium parvulum DSM 20469]
gi|257473673|gb|ACV51792.1| ribonuclease P protein component [Atopobium parvulum DSM 20469]
Length = 107
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +K R +F V R + + V F K+ G AV RNR +R
Sbjct: 1 MKTIKSRAEFERVFSTGKRAQSSVLRIRVAPSTEAHPSEVAFVAPKRLGNAVFRNRCKRV 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+EA R G+ G+ +L A +D ++ +R+
Sbjct: 61 LREAAR--KSGLPVEGYGIILFATKDTHSTNPADISISLDALLRKT 104
>gi|331007967|ref|ZP_08331020.1| Ribonuclease P protein component [gamma proteobacterium IMCC1989]
gi|330418222|gb|EGG92835.1| Ribonuclease P protein component [gamma proteobacterium IMCC1989]
Length = 120
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L F V + +L N+ R+G + KK AV RNR++R +
Sbjct: 9 RLLNAADFQNVFSEPPLRASHQHCLILAKPNNLGYNRLGLVIAKKNIRLAVHRNRIKRLI 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ R + G D +++A++ + + ++ R ++
Sbjct: 69 RESFRHLPSNNV--GIDAIVLARKGLGEVDNPGVTQIMDKQWLRIQKK 114
>gi|293400060|ref|ZP_06644206.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306460|gb|EFE47703.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 108
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K R+FA + + P F + V RVG +V KK G AV RN+
Sbjct: 1 MKKEFRVKDTREFAEIMNYKKFYTCPSFVIYVKPRKED--HARVGISVGKKMGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ V+ D +++ + + +++ K
Sbjct: 59 IKRQVRSMVQDIYTFD--ENFDTIILVRVKYHEENYINNKKLLERLIKKVK 107
>gi|227487664|ref|ZP_03917980.1| ribonuclease P [Corynebacterium glucuronolyticum ATCC 51867]
gi|227092358|gb|EEI27670.1| ribonuclease P [Corynebacterium glucuronolyticum ATCC 51867]
Length = 102
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNS---NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR-LCA 72
K G + ++ + PR G V+K G AV R+ RRL+ A
Sbjct: 2 KNGVRAGTRVLVVHAVDCSTDVERQGGPRFGLVVSKAVGNAVVRHHTSRRLRHLAMDAIA 61
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ DYVL A +EL +HF +R+
Sbjct: 62 RETARPQCDYVLRALPGIDEATAEELSHHFSAALRKA 98
>gi|226952828|ref|ZP_03823292.1| ribonuclease P [Acinetobacter sp. ATCC 27244]
gi|226836449|gb|EEH68832.1| ribonuclease P [Acinetobacter sp. ATCC 27244]
Length = 132
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 12 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRVKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL D V++ K I +EL ++ +R
Sbjct: 72 RESFRLHQAQF-NADIDIVVMPKVGIDTISNQELHQQLDFAWQKLQR 117
>gi|71901966|ref|ZP_00684017.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|71728271|gb|EAO30451.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
Length = 121
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AYKLVPG--DYVVVVRQTAKDLSNAELSVALLSLLRR 97
>gi|182682732|ref|YP_001830892.1| ribonuclease P [Xylella fastidiosa M23]
gi|182632842|gb|ACB93618.1| ribonuclease P protein component [Xylella fastidiosa M23]
Length = 121
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRR 97
>gi|332976006|gb|EGK12877.1| ribonuclease P protein component [Psychrobacter sp. 1501(2011)]
Length = 132
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 7/125 (5%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
L K +F V P F + + + R+G +TKK AV RN
Sbjct: 7 PKAKRLLKPAEFKPVFNQPLFKIHQPHFMAFAYD--SESEQARLGMAITKKRIPTAVARN 64
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++E R + D V I K+ + ++ E + +
Sbjct: 65 TIKRIIREQFRHKHPEL--PALDLVFILKQSTKDLSNDQMRQQVNEILAKVIAKQRRNLA 122
Query: 119 FSRKS 123
K+
Sbjct: 123 AKAKT 127
>gi|229491115|ref|ZP_04384943.1| ribonuclease P protein component [Rhodococcus erythropolis SK121]
gi|229321853|gb|EEN87646.1| ribonuclease P protein component [Rhodococcus erythropolis SK121]
Length = 126
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 8/116 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGC 53
+ L++ F V++G + + +N PR G V+K G
Sbjct: 2 LPEPFRLRRHADFSVAVRRGRRMGRRDLVVHAFDREQVEALVVTNHGPRFGLIVSKAVGP 61
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R+R+ RRL+ G + D V+ A A EL + +
Sbjct: 62 AVIRHRVARRLRHICA-DFVGQVSPETDVVIRALPGAATASSAELAKQLRGGLTKM 116
>gi|227834360|ref|YP_002836067.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
gi|262183093|ref|ZP_06042514.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
gi|254808062|sp|C3PL13|RNPA_CORA7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|227455376|gb|ACP34129.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
Length = 122
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 10/110 (9%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMR 61
L RQF KG R G + L N+ PR G V+K G AV R+R
Sbjct: 8 LTSPRQFRRTIKGGRRAGTRTVVVHLRFNDGEDAIAATGPRFGLIVSKAVGNAVVRHRTS 67
Query: 62 RRLKEAVRLCAEG-----VLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRL+ +L D V+ A + + L + +
Sbjct: 68 RRLRHVCMSLMRDGVKGTMLPANVDIVIRALPASGEATSERLERDIRKAL 117
>gi|229816994|ref|ZP_04447276.1| hypothetical protein BIFANG_02249 [Bifidobacterium angulatum DSM
20098]
gi|229785739|gb|EEP21853.1| hypothetical protein BIFANG_02249 [Bifidobacterium angulatum DSM
20098]
Length = 73
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+G V+K G AV RN ++RR + + E L G D VL AK A F+ L
Sbjct: 1 MGLAVSKSVGNAVTRNSVKRRFR-VLASRYEHTLPEGVDVVLRAKPSAASASFQSLDEQM 59
Query: 103 V 103
Sbjct: 60 A 60
>gi|126661518|ref|ZP_01732567.1| ribonuclease P [Cyanothece sp. CCY0110]
gi|126617203|gb|EAZ88023.1| ribonuclease P [Cyanothece sp. CCY0110]
Length = 127
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQ-GCAV 55
+ L+ + F V +G+ + + V N+ L + G ++++K AV
Sbjct: 3 LPKQNRLRHPQAFKTVYNRGKRYQSSHLVMRVFCKNDQQEAKLPTQFGISISQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K +RL +K V++ KR+ ++ E + + +
Sbjct: 63 VRNRLKRQIKAVIRLFLPR-IKQRCQVVIVVKRNTTECKYEHFLRELEELLIKAE 116
>gi|29840592|ref|NP_829698.1| ribonuclease P [Chlamydophila caviae GPIC]
gi|33301608|sp|Q821V0|RNPA_CHLCV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29834942|gb|AAP05576.1| ribonuclease P protein component [Chlamydophila caviae GPIC]
Length = 139
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KR+QF + + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKYARVLKRKQFLYISRAGSHCQGSQVIFHVAPSRYSGCCKLGITVSKKFGKAHKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + V++ K F++L F +++
Sbjct: 66 KRIVREAFR--KKRHSLPACQIVVMPKNK-QQPKFEDLLQDFAQQI 108
>gi|301168600|emb|CBW28190.1| Ribonuclease P protein component [Bacteriovorax marinus SJ]
Length = 121
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLN---NNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L + F+ ++K R + + R+GF+VTKK G AV RNR +R
Sbjct: 11 RLLSAQDFSYLRKNSKRFKSKWLMAYYKPTRIRLPESHSRIGFSVTKKVGNAVLRNRYKR 70
Query: 63 RLKEAVRLCAEGVLKHGHDYVLI 85
+++ R + + G D ++I
Sbjct: 71 IMRDMFR--NSTLKEKGLDILVI 91
>gi|41410447|ref|NP_963283.1| ribonuclease P [Mycobacterium avium subsp. paratuberculosis K-10]
gi|22001935|sp|Q9L7L9|RNPA_MYCPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|6969274|gb|AAF33695.1| rnpA [Mycobacterium avium subsp. paratuberculosis]
gi|41399281|gb|AAS06899.1| RnpA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 119
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNN---NNSNLLPRVGFTVTKKQGCAVE 56
+ + + +F VK G P + + ++ + PRVG V K G AV+
Sbjct: 2 LPARNRMTRSTEFDATVKHGTRMAQPDIVVHLRRGSEPDDESAGPRVGLVVGKAVGTAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 RHRVARRLRHVARPLLGELQPSDR-LVIRALPGSRTVSSARLAQELQRCLRRM 113
>gi|294648706|ref|ZP_06726166.1| ribonuclease P [Acinetobacter haemolyticus ATCC 19194]
gi|292825381|gb|EFF84124.1| ribonuclease P [Acinetobacter haemolyticus ATCC 19194]
Length = 131
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRVKRLA 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL D V++ K I +EL ++ +R
Sbjct: 71 RESFRLHQAQF-NADIDIVVMPKVGIDTISNQELHQQLDFAWQKLQR 116
>gi|304412703|ref|ZP_07394306.1| ribonuclease P protein component [Shewanella baltica OS183]
gi|307305832|ref|ZP_07585578.1| ribonuclease P protein component [Shewanella baltica BA175]
gi|304348913|gb|EFM13328.1| ribonuclease P protein component [Shewanella baltica OS183]
gi|306911325|gb|EFN41751.1| ribonuclease P protein component [Shewanella baltica BA175]
Length = 107
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N+ PR+G TV K+ A +RNR++R ++++ R
Sbjct: 5 AQFKSVFSNPIKASSA-EITLLAIPNTEQHPRMGLTVAKRFVKRANQRNRIKRVIRDSFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + E+ + R+ R Y
Sbjct: 64 LNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRRY 105
>gi|288574741|ref|ZP_06393098.1| ribonuclease P protein component [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570482|gb|EFC92039.1| ribonuclease P protein component [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 137
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LK+ +F +V + G KG L + + R G V KKQG A R+R RR L
Sbjct: 24 RLKRGWEFDVVFRTGSRHKGALVRLLFIEAPDGKT--RFGVVVGKKQGNACVRSRGRRVL 81
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+EA R A ++ G+ +VL L +++ + R
Sbjct: 82 REAARRLAP-WVRPGYWFVLSLSYRGLGGNARDVYVDVSRLMERK 125
>gi|297158789|gb|ADI08501.1| RNase P component [Streptomyces bingchenggensis BCW-1]
Length = 127
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 13/120 (10%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNN-----------NNSNLLPRVGFTVT 48
+ L++R FA + R G P + + S R GF V+
Sbjct: 2 LPTEKRLRRREDFAAAVRRGRRAGRPLLVVHYRSGLASGETDPHAPGESAPPARAGFVVS 61
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G AV RN ++RRL+ +R + G V+ A A +L VRR
Sbjct: 62 KAVGGAVVRNLVKRRLRHLMRDRLD-HFPAGSLVVVRALPGAGEAGHDQLARDLDTAVRR 120
>gi|256398145|ref|YP_003119709.1| ribonuclease P protein [Catenulispora acidiphila DSM 44928]
gi|256364371|gb|ACU77868.1| ribonuclease P protein [Catenulispora acidiphila DSM 44928]
Length = 109
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-----VGFTVTKKQGCAVERNRMR 61
+++ F +G R G + L + GF V+K G AV R ++
Sbjct: 1 MRRSADFGAAVRGGRRAGRTTLVAHLAVPSDPPPAADAAVLAGFVVSKAVGPAVVRTAVK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRL+ VR + L G V+ A A L +R+ R
Sbjct: 61 RRLRHLVRSRLDQ-LPPGSRLVIRALPAAAEADSATLGADLDSALRKLLR 109
>gi|237756919|ref|ZP_04585391.1| ribonuclease P protein component [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690920|gb|EEP60056.1| ribonuclease P protein component [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 109
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRR 62
+ LKK + V + L V N+ R F +KK +V+RNR +R
Sbjct: 1 MFTLKK-KDIQNVFSNKQIIDNEDFLVVYLKNDQE-KSRYAFVASKKNFKKSVDRNRAKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
L+EAVRL + +D + IAK+ L ++ + + + K
Sbjct: 59 LLREAVRLRLNLLDDLKYDMIFIAKKSILNKKVYDILSQLDTVIGKLK 106
>gi|194367816|ref|YP_002030426.1| ribonuclease P protein component [Stenotrophomonas maltophilia
R551-3]
gi|238693460|sp|B4SPG1|RNPA_STRM5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|194350620|gb|ACF53743.1| ribonuclease P protein component [Stenotrophomonas maltophilia
R551-3]
Length = 152
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
++ R +++ V G R P +L L ++ R+G V++K AV RNR
Sbjct: 11 PRSARVRTRAEYSTVFNGARRVSDPLMTLHWLP---ADRPARLGLAVSRKVDPHAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
++R L++A+R ++ G D+V++A+ A ++ F
Sbjct: 68 IKRVLRDALRQTRTD-MQPG-DFVVVARSAARNASNDDIRQAF 108
>gi|46579488|ref|YP_010296.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448902|gb|AAS95555.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
Length = 96
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L V+ + R+G VT+K G AV+RNR++R L+E RL + VL D + + K
Sbjct: 1 MLFVMERSADPEGWRLGLAVTRKTGTAVQRNRVKRVLREFFRLH-QHVLPDDADIIAVPK 59
Query: 88 R 88
R
Sbjct: 60 R 60
>gi|288942816|ref|YP_003445056.1| ribonuclease P protein component [Allochromatium vinosum DSM 180]
gi|288898188|gb|ADC64024.1| ribonuclease P protein component [Allochromatium vinosum DSM 180]
Length = 128
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L + QF V R G + VL N PR+G + KK AV+RNR++R
Sbjct: 19 RLTQSSQFKRVFADASRAGRQGFV-VLYRPNGLDQPRLGLAIAKKCARRAVDRNRLKRIA 77
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ R + + G D V++ + A P + L + +S
Sbjct: 78 RESFRRSCQQL--PGVDIVVLCAQGAPREPNQRLFDVLERAWAHIGKS 123
>gi|304390478|ref|ZP_07372431.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315657687|ref|ZP_07910569.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|304326234|gb|EFL93479.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315492159|gb|EFU81768.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 127
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGRHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR G V AK + + +L N +R+ + ++F
Sbjct: 62 VKRRLRHLVRDRITEF-PAGSLNVFYAKAGIAEVDYPQLENQIQILLRKMAHKQHGDRDF 120
>gi|312601632|gb|ADQ90887.1| Ribonuclease P protein component [Mycoplasma hyopneumoniae 168]
Length = 112
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M I +KK +F + + + + + ++ +G +V KK AV+RN
Sbjct: 1 MQKIRSIKKNWEFQAIINKKNQIVTNYLIFYYVKSD---FFEIGISVPKKFANAVKRNYY 57
Query: 61 RRRLKEAVRLCA-EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R++K + + +G + VLIA+++ L + F+ + + KR+
Sbjct: 58 KRQIKNVLYILWKKGEIFLNFRVVLIARKNFLPLSFETKYQKLAKIFKELKRNEK 112
>gi|15618843|ref|NP_225129.1| ribonuclease P [Chlamydophila pneumoniae CWL029]
gi|15836467|ref|NP_300991.1| ribonuclease P [Chlamydophila pneumoniae J138]
gi|16752097|ref|NP_445464.1| ribonuclease P [Chlamydophila pneumoniae AR39]
gi|33242299|ref|NP_877240.1| ribonuclease P [Chlamydophila pneumoniae TW-183]
gi|9789806|sp|Q9Z6X2|RNPA_CHLPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4377257|gb|AAD19072.1| Ribonuclease P Protein Component [Chlamydophila pneumoniae CWL029]
gi|8163525|gb|AAF73717.1| ribonuclease P protein component [Chlamydophila pneumoniae AR39]
gi|8979308|dbj|BAA99142.1| ribonuclease P protein component [Chlamydophila pneumoniae J138]
gi|33236810|gb|AAP98897.1| ribonuclease P protein component [Chlamydophila pneumoniae TW-183]
Length = 139
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + KR+QF + + G +G + V+ + + R+G TV+KK G A ERN
Sbjct: 6 LPKQSRVLKRKQFLYITRSGFCCRGSQATFYVVPSRHPGTC-RMGITVSKKFGKAHERNS 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++E R + V+ K F +L F+ ++
Sbjct: 65 FKRVVREVFRHVRHQL--PNCQIVVFPKGHKQRPVFSKLLQDFINQI 109
>gi|298345818|ref|YP_003718505.1| ribonuclease P [Mobiluncus curtisii ATCC 43063]
gi|298235879|gb|ADI67011.1| ribonuclease P [Mobiluncus curtisii ATCC 43063]
Length = 127
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGCHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR G V AK + + +L N +R+ + ++F
Sbjct: 62 VKRRLRHLVRDRITEF-PAGSLNVFYAKAGIAEVDYPQLENQIQILLRKMAHKQHGDRDF 120
>gi|126176563|ref|YP_001052712.1| ribonuclease P [Shewanella baltica OS155]
gi|153002877|ref|YP_001368558.1| ribonuclease P [Shewanella baltica OS185]
gi|160877624|ref|YP_001556940.1| ribonuclease P [Shewanella baltica OS195]
gi|217975465|ref|YP_002360216.1| ribonuclease P [Shewanella baltica OS223]
gi|166226739|sp|A3DAT0|RNPA_SHEB5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226740|sp|A6WUK6|RNPA_SHEB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043746|sp|A9KX22|RNPA_SHEB9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808085|sp|B8EDW7|RNPA_SHEB2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|125999768|gb|ABN63843.1| ribonuclease P protein component [Shewanella baltica OS155]
gi|151367495|gb|ABS10495.1| ribonuclease P protein component [Shewanella baltica OS185]
gi|160863146|gb|ABX51680.1| ribonuclease P protein component [Shewanella baltica OS195]
gi|217500600|gb|ACK48793.1| ribonuclease P protein component [Shewanella baltica OS223]
gi|315269823|gb|ADT96676.1| ribonuclease P protein component [Shewanella baltica OS678]
Length = 118
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
QF V ++ + +L N+ PR+G TV K+ A +RNR++R ++++ R
Sbjct: 16 AQFKSVFSNPIKASSA-EITLLAIPNTEQHPRMGLTVAKRFVKRANQRNRIKRVIRDSFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
L + D V++ + + + E+ + R+ R Y
Sbjct: 75 LNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRRY 116
>gi|28199978|ref|NP_780292.1| ribonuclease P [Xylella fastidiosa Temecula1]
gi|32129972|sp|Q879S2|RNPA_XYLFT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28058109|gb|AAO29941.1| ribonuclease P [Xylella fastidiosa Temecula1]
Length = 135
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 20 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 77 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRR 111
>gi|213865388|ref|ZP_03387507.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
Length = 87
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L NS PR+G TV +K A ERNR++R +E+ RL + D+V++AK+
Sbjct: 3 ILGRLNSLGHPRIGLTVARKIVRRAHERNRIKRLTRESFRLRQHEL--PAMDFVVVAKKG 60
Query: 90 ALFIPFKELCNHFVERVRRNKR 111
+ + L + RR+ R
Sbjct: 61 VADLDNRALSEALEKLWRRHCR 82
>gi|71275536|ref|ZP_00651822.1| ribonuclease P protein [Xylella fastidiosa Dixon]
gi|71900183|ref|ZP_00682323.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|170731354|ref|YP_001776787.1| ribonuclease P [Xylella fastidiosa M12]
gi|71163836|gb|EAO13552.1| ribonuclease P protein [Xylella fastidiosa Dixon]
gi|71730072|gb|EAO32163.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|167966147|gb|ACA13157.1| ribonuclease P [Xylella fastidiosa M12]
Length = 121
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AHKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRR 97
>gi|304313415|ref|YP_003813013.1| Ribonuclease P protein component [gamma proteobacterium HdN1]
gi|301799148|emb|CBL47391.1| Ribonuclease P protein component [gamma proteobacterium HdN1]
Length = 133
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
S L +++++ V + G L + + N L R+G +KK +V RNR
Sbjct: 7 SRELRLTQKKEYDQVFAHASFKFGCAQFLVLASFRNDALPARLGLVASKKHLKNSVNRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R+ +E+ R +L G D V++++ AL E+ + + + +
Sbjct: 67 FKRQARESFR--KGQMLLTGCDIVVLSRTQALDA--NEIPSQLDQIWLKLAKKR 116
>gi|257466627|ref|ZP_05630938.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
gi|315917782|ref|ZP_07914022.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
gi|313691657|gb|EFS28492.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
Length = 76
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPF 95
+ GF +KK G AV RNR++R +E ++ E +L ++L+AK+ + I +
Sbjct: 3 HNQYGFVASKKIGNAVCRNRIKRLFREFIKQN-EILLPKSTTFILVAKKKSGEEIKTIKY 61
Query: 96 KELCNHFVERVRRNK 110
+++ + + K
Sbjct: 62 EQIEKDLYKIFKIKK 76
>gi|325123491|gb|ADY83014.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter calcoaceticus PHEA-2]
Length = 121
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 39/107 (36%), Gaps = 2/107 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 2 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPKSRLGIVVAKKKVRRAHERNRIKRLA 61
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL D V++ K I EL ++ +R
Sbjct: 62 RESFRLHQPNFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 107
>gi|54307241|ref|YP_128261.1| ribonuclease P [Photobacterium profundum SS9]
gi|60390459|sp|Q6LW54|RNPA_PHOPR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46911661|emb|CAG18459.1| Putative RNase P protein component [Photobacterium profundum SS9]
Length = 118
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L +L N PR+G V KK A RN +R ++E+ RL + +D+V+IAK
Sbjct: 33 LTILARPNDLNHPRLGLAVPKKQIKTAPGRNHFKRIVRESFRLKQHDL--PANDFVVIAK 90
Query: 88 RDALFIPFKELCNHFVERVRRNKR 111
+ A + +EL + R R
Sbjct: 91 KSASELSNEELFKLLDKLWHRLSR 114
>gi|68537198|ref|YP_251903.1| ribonuclease P protein component [Corynebacterium jeikeium K411]
gi|123649953|sp|Q4JSC2|RNPA_CORJK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68264797|emb|CAI38285.1| ribonuclease P protein component [Corynebacterium jeikeium K411]
Length = 129
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 15/114 (13%)
Query: 14 ALVKKGELRKGPFFSLEVLN------------NNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ G + + VL + PR+G V+K G AV R+
Sbjct: 16 QTIRNGRKKGSRTVVVHVLAGGSRAEELPLPLQEGATAGPRMGLVVSKAVGNAVTRHNTS 75
Query: 62 RRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R+L+ A R E G V+ A + F+EL +RR
Sbjct: 76 RKLRHAFRAVMEEDSLDFPVGTTVVIRALPKSATASFEELVGDVRSCIRRALPR 129
>gi|326797442|ref|YP_004315262.1| ribonuclease P protein component [Marinomonas mediterranea MMB-1]
gi|326548206|gb|ADZ93426.1| Ribonuclease P protein component [Marinomonas mediterranea MMB-1]
Length = 132
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRL 70
+ V K +L + S R+G V KK AV RNR++R ++E+ R
Sbjct: 17 DYQSVFNNTSFKVFAGEFLILAHKKSGTDARLGLIVAKKNEKRAVGRNRIKRVVRESFRH 76
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + D V +A++ + +EL + +
Sbjct: 77 H--KLKLNDLDIVFLARQGIKEVDNQELHKRLEKAWAQ 112
>gi|313848328|emb|CBY17331.1| putative ribonuclease P protein component [Chlamydophila psittaci
RD1]
gi|328915012|gb|AEB55845.1| Ribonuclease P protein component [Chlamydophila psittaci 6BC]
Length = 139
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KRRQF + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRRQFLYISRAGSHCQGSQVIFHVAPSKYPGCCKLGITVSKKFGKANKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA RL + V++ K F+EL F +++
Sbjct: 66 KRIVREAFRL--KRHSLPSCQIVVMPKNK-HRPKFEELLQDFAQQI 108
>gi|320109425|ref|YP_004185015.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
gi|319927946|gb|ADV85021.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
Length = 154
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL-------PRVGFTVTKKQGCAVER 57
L+ + G + G + S S PRVG TV + G AV R
Sbjct: 35 RLRSHGDYQRMYAVGRKQFGKYISYFYAVRQPSENPRHRVHVGPRVGLTVGRVMGDAVTR 94
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
NR++RRL+ AV+ + D L KR + + + L R ++ +
Sbjct: 95 NRIKRRLRSAVQQHLVLLGGLNLDVALHPKRGFVDLEWSALERDVAVIFRAIAKAAGKPQ 154
>gi|88608075|ref|YP_506724.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
gi|88600244|gb|ABD45712.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
Length = 113
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ S+ +L + + + P VGF VTKK G AV+RN++RR+L+ +
Sbjct: 15 RYYQCNSFGCRSGSILLLISRGTTVEPVVGFIVTKKVGSAVKRNKVRRKLRGLLPFLVSM 74
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
Y+ I ++F F + + + R RS+
Sbjct: 75 KKLLNRAYIFIPSPASVFSDFSAMREDVLSCLERAGRSH 113
>gi|308810481|ref|XP_003082549.1| RNPA_PSEAO Ribonuclease P protein component (ISS) [Ostreococcus
tauri]
gi|116061018|emb|CAL56406.1| RNPA_PSEAO Ribonuclease P protein component (ISS) [Ostreococcus
tauri]
Length = 239
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKK-QGCAVERNRMR 61
LK F VK+ G G ++ ++N + + R+G V KK AV+RN ++
Sbjct: 98 RLKTNADFDRVKRFGRTFNGSHLRIKAVDNASYDAATCTRLGIVVPKKRVRRAVDRNLIK 157
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
RR++ R + D ++ A AL F+ L +
Sbjct: 158 RRIRHVFRTNKDKW-PPRVDIIVFAGDTALEGGFEGLRDDM 197
>gi|294786221|ref|ZP_06751475.1| ribonuclease P [Parascardovia denticolens F0305]
gi|294485054|gb|EFG32688.1| ribonuclease P [Parascardovia denticolens F0305]
Length = 140
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-------YVLIA 86
N +S+ +G V+K G AVERN+++RR + R + + D V+ A
Sbjct: 47 NGSSDQPIYLGLAVSKAVGHAVERNKVKRRFRVLARKYEPLLAQALKDRPGTRLSLVMRA 106
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
K +PF +L + + R
Sbjct: 107 KPQTAHVPFADLDQQVEKAFVKLVRQMNGSDGRP 140
>gi|331700393|ref|YP_004336632.1| Ribonuclease P protein component [Pseudonocardia dioxanivorans
CB1190]
gi|326955082|gb|AEA28779.1| Ribonuclease P protein component [Pseudonocardia dioxanivorans
CB1190]
Length = 119
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L +R +F + R G + L+ + + PR GF V+K G AV R+R+
Sbjct: 2 LPAGARLTRRDEFTTTMRHGRRSGRSRLVVHLD-VSGSDAPRAGFVVSKAVGNAVVRHRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RRL+ V G L G V+ A + EL +R R
Sbjct: 61 SRRLRHVVAPRL-GALPAGARLVVRALPASATASSAELAADLDGALRTAVRRLAEPAAR 118
>gi|148274161|ref|YP_001223722.1| putative RNAse P, protein component [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|166226711|sp|A5CVC5|RNPA_CLAM3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147832091|emb|CAN03064.1| putative RNAse P, protein component [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 113
Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R GF ++KK G AV RN +RRRLK AV + G V+
Sbjct: 36 GPDDAPTRFGFIISKKVGNAVTRNLVRRRLK-AVSAGLLHSVPPGTSIVIRVLPGMERTA 94
Query: 95 FKELCNHFVERVRRNKRS 112
+ L V R R+
Sbjct: 95 WDTLQEEMASAVTRAVRT 112
>gi|302543967|ref|ZP_07296309.1| ribonuclease P protein component [Streptomyces hygroscopicus ATCC
53653]
gi|302461585|gb|EFL24678.1| ribonuclease P protein component [Streptomyces himastatinicus ATCC
53653]
Length = 127
Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 13/120 (10%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNN-----------NNSNLLPRVGFTVT 48
+ L++R+ FA + R G P + + S R GF V+
Sbjct: 2 LPTEHRLRRRQDFAAAVRRGRRAGRPLLVVHFRSGLTSKNTDPHAPGESAPPARAGFVVS 61
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G AV RN ++RRL+ +R + G V+ A A +L V+R
Sbjct: 62 KAVGGAVVRNLVKRRLRHLMRDRLD-HFPAGSLVVVRALPGAGEAGHDQLARDLDTAVQR 120
>gi|119510153|ref|ZP_01629292.1| ribonuclease P [Nodularia spumigena CCY9414]
gi|119465214|gb|EAW46112.1| ribonuclease P [Nodularia spumigena CCY9414]
Length = 134
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 20/128 (15%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--------------RVGF 45
+ LK R+ F V + G R F+L L + + P + G
Sbjct: 3 LPKANRLKSRKDFQAVFREGIRRHSSHFTLRAL-RPSGSKAPSLDTATSQKPLSSTQFGV 61
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KELCNHF 102
+++ K AV RNR++R++ A+ L G V++ K A ++
Sbjct: 62 SISTKVSKRAVIRNRIKRQITAALHDLLPN-LSPGWRVVIVVKPTAAESKCVSQQFLQEL 120
Query: 103 VERVRRNK 110
+ + + +
Sbjct: 121 EQLLVKAE 128
>gi|71280614|ref|YP_271690.1| ribonuclease P protein component [Colwellia psychrerythraea 34H]
gi|71146354|gb|AAZ26827.1| ribonuclease P protein component [Colwellia psychrerythraea 34H]
Length = 128
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKK-QGCAVERNRMR 61
F V K F+L V NS R+G + KK AV+RNR++
Sbjct: 17 HFQAVFSKPIRFGSRHFTLLVTPKPHTFVSDKHNSVAKNRLGLAIAKKRVKLAVQRNRVK 76
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R+++E+ RL + + D V++ K + K + + R+ + +
Sbjct: 77 RQVRESFRLNQDNL--PAIDIVVMVKSGIDQLDNKTINQELEKIWRKIIQRHK 127
>gi|324999880|ref|ZP_08120992.1| ribonuclease P protein component [Pseudonocardia sp. P1]
Length = 128
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-----RVGFTVTKKQGCAV 55
+ L +R +FA K R G + L+ +P R GF V+K G AV
Sbjct: 2 LPAHARLTRRPEFASTIKRGRRAGRSRLVVHLDLTRPGGVPEHASPRAGFVVSKAVGNAV 61
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R+R+ RRL+ V + L G V+ A A EL +
Sbjct: 62 VRHRVTRRLRHLVSDRMDQ-LPAGAALVVRALPPAGRATSAELGADLDSAL 111
>gi|307547062|ref|YP_003899541.1| ribonuclease P [Halomonas elongata DSM 2581]
gi|307219086|emb|CBV44356.1| ribonuclease P [Halomonas elongata DSM 2581]
Length = 132
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L + V K L L + N PR+G +KK AV+RNR+
Sbjct: 7 PRRLRLLTAEDYRRVFDTAAFKLHGKGLMALASPNELGHPRLGLIFSKKNVRRAVDRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R +E++RL + D VL+A+R + + + RR +R
Sbjct: 67 KRITRESIRLRQHRL--PAVDIVLLARRGVQELDNEVVHRQLHGMWRRLEREAQKTSGRP 124
Query: 121 R 121
Sbjct: 125 T 125
>gi|319777716|ref|YP_004137367.1| ribonuclease p protein component [Mycoplasma fermentans M64]
gi|318038791|gb|ADV34990.1| Ribonuclease P protein component [Mycoplasma fermentans M64]
Length = 110
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K +F V K + + + + + N++ ++G TV KK AV RN
Sbjct: 1 MKKIYRLQKSWEFDAVIKFQKQVLNKYMIIYYMPNDD----FKIGITVPKKFCNAVLRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE---LCNHFVERVRRNKRS 112
+R+LK + K +VLI ++D L + +++ + E+++ K+
Sbjct: 57 YKRQLKSIIHSLNLYGEKMH--FVLIPRKDFLNLIYEDKLTITKKLFEKIKNGKQK 110
>gi|238810222|dbj|BAH70012.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 114
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K +F V K + + + + + N++ ++G TV KK AV RN
Sbjct: 5 MKKIYRLQKSWEFDAVIKFQKQVLNKYMIIYYMPNDD----FKIGITVPKKFCNAVLRNY 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE---LCNHFVERVRRNKRS 112
+R+LK + K +VLI ++D L + +++ + E+++ K+
Sbjct: 61 YKRQLKSIIHSLNLYGEKMH--FVLIPRKDFLNLIYEDKLTITKKLFEKIKNGKQK 114
>gi|297565965|ref|YP_003684937.1| ribonuclease P protein component [Meiothermus silvanus DSM 9946]
gi|296850414|gb|ADH63429.1| ribonuclease P protein component [Meiothermus silvanus DSM 9946]
Length = 98
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG V+KK G AV RN++R +R + + V++A+ +A F EL
Sbjct: 31 RVGIVVSKKVGKAVVRNKVR----RRLREILRRMHLPSCELVVVAQPEAAGASFAELLRD 86
Query: 102 FVERVRRN 109
+ +++
Sbjct: 87 LTQALKKA 94
>gi|307699980|ref|ZP_07637031.1| ribonuclease P protein component [Mobiluncus mulieris FB024-16]
gi|307615018|gb|EFN94236.1| ribonuclease P protein component [Mobiluncus mulieris FB024-16]
Length = 117
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
++ + L K ++ LV ++G+ R F ++S R+GF V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYP-ARIGFVVPKKSVRLATRRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR G G V +A+ A + ++EL + + +R
Sbjct: 61 LVKRRLRGAVREHL-GEFPPGSLTVFLARPAADKVAYRELDSQLESLIAGWQRPQQK 116
>gi|225020860|ref|ZP_03710052.1| hypothetical protein CORMATOL_00868 [Corynebacterium matruchotii
ATCC 33806]
gi|224946342|gb|EEG27551.1| hypothetical protein CORMATOL_00868 [Corynebacterium matruchotii
ATCC 33806]
Length = 85
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+ + + PR G V+K G AV R+ + R+L+ +R + L G V+ A
Sbjct: 4 VLFSRDVLTPKPRCGLVVSKAVGNAVTRHAVSRKLRAIIRPLFDD-LPPGTLIVIRALPA 62
Query: 90 ALFIPFKELCNHFVERVRRNKRS 112
A +EL + + + +
Sbjct: 63 AAHANSEELSHDVQRALAKIRER 85
>gi|213966269|ref|ZP_03394453.1| ribonuclease P protein component [Corynebacterium amycolatum SK46]
gi|213951121|gb|EEB62519.1| ribonuclease P protein component [Corynebacterium amycolatum SK46]
Length = 126
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL------------LPRVGFTV 47
+ L+ R F V++G L + + S PRVG V
Sbjct: 2 LPQSNKLRSSRDFTVTVRRGRRIGRKTLVLHIRDTAASGGEDKTDTQIARFGGPRVGLVV 61
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+K G AV R+ + R+L+ V A L D V+ A + +EL + +
Sbjct: 62 SKAVGNAVTRHAVSRKLRH-VMAAAAQDLPSTMDIVVRALPASATATSQELSHDVQSALA 120
Query: 108 RNKRSY 113
+R
Sbjct: 121 TYERRR 126
>gi|237750450|ref|ZP_04580930.1| ribonuclease P protein component [Helicobacter bilis ATCC 43879]
gi|229373980|gb|EEO24371.1| ribonuclease P protein component [Helicobacter bilis ATCC 43879]
Length = 140
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFS-LEVLNNNNSNLLPR--------------VGFT 46
I LK +F +V K LR F + + + R +GF+
Sbjct: 10 KKIDTLKNSYEFDIVFKNGLRFNRDFMAIYAMPLRDFIFHLRKKKQYNRFIESKMLLGFS 69
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ KK A +RN +RRR+K ++ G+ +V I ++ F L H +
Sbjct: 70 INKKVAKACKRNLIRRRIKAVMQEYGTKY--RGYAFVFICRKGISDYDFIALKKHILYST 127
Query: 107 RRNKRSY 113
++ ++
Sbjct: 128 KKLTQAR 134
>gi|296395445|ref|YP_003660329.1| ribonuclease P protein component [Segniliparus rotundus DSM 44985]
gi|296182592|gb|ADG99498.1| ribonuclease P protein component [Segniliparus rotundus DSM 44985]
Length = 130
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNS---------NLLPRVGFTVTKK 50
+ + ++ RR FA V+ G + L+ + PR+G V K+
Sbjct: 2 LPSHNRMRNRRDFAETVRSGRRVGRGDVVVHFLSARSEKRAGCPVAEPCAPRIGLVVGKQ 61
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G +V R R+ RRL+ A+ ++ V+ A A EL + +R+
Sbjct: 62 VGGSVTRKRVSRRLRAALGELLA-LVPQSSRLVVRALPAAAGAEVAELESQLRSALRKLA 120
Query: 111 RSYYSGKNFS 120
+ K S
Sbjct: 121 PATAEEKGPS 130
>gi|160871891|ref|ZP_02062023.1| ribonuclease P protein component [Rickettsiella grylli]
gi|159120690|gb|EDP46028.1| ribonuclease P protein component [Rickettsiella grylli]
Length = 120
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 5 CILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRR 62
+++ F ++GE +K + V N+ RVG ++KK A+ RNR++R
Sbjct: 12 SRIQRAEDFRKTFQQGEKQKRGGLVVYVKPNDLG--FARVGLVISKKIVPNAINRNRLKR 69
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
++E+ RL + + D +++ R +L
Sbjct: 70 LIRESFRLNQQRL--PDVDIIVVVTRRSL 96
>gi|32130455|sp|Q9P9U0|RNPA_XYLFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 135
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L++ ++ R+G V+++ AV RNR++R L+E +R
Sbjct: 20 YVAFEQGRRYSS---VLLRLHHLPTSGPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
A ++ DYV++ ++ A + EL + +RR
Sbjct: 77 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRR 111
>gi|254483185|ref|ZP_05096418.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2148]
gi|214036556|gb|EEB77230.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2148]
Length = 127
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L ++ V G + L +L ++ R+G + KK A +RNR++R
Sbjct: 12 RLLNAEDYSRVFDGAEARASHKHLLLLARTSTRPGHRLGLVIAKKNIRLAAQRNRIKRVA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E R+ + D +L+A+R + + L ++ ++
Sbjct: 72 REVFRVLPDSE--PSLDVILLARRGLDQLDNEALSTILRQQWQK 113
>gi|227876538|ref|ZP_03994649.1| hypothetical protein HMPREF0577_1950 [Mobiluncus mulieris ATCC
35243]
gi|227842852|gb|EEJ53050.1| hypothetical protein HMPREF0577_1950 [Mobiluncus mulieris ATCC
35243]
Length = 117
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
++ + L K ++ LV ++G+ R F ++S R+G V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYP-ARIGLVVPKKSVRLATRRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR + G V +A+ A + + EL + + +R
Sbjct: 61 LVKRRLRGAVREHLDEF-PPGSLTVFLARPAADKVAYSELDSQLESLIAGWQRPQQK 116
>gi|289166755|ref|YP_003456893.1| ribonuclease P protein component (RNase P) [Legionella longbeachae
NSW150]
gi|288859928|emb|CBJ13914.1| putative ribonuclease P protein component (RNase P) [Legionella
longbeachae NSW150]
Length = 114
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L + ++ V + F + NN R+G ++KK A +RNR
Sbjct: 5 KKTQRLITKNDYSHVFEQASKIVTSEFIILYRKNNLG--YARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+E+ R D + +A++ + + ++
Sbjct: 63 IKRLLRESFRYEE----LPSVDIIFLARQGVAKQTNANINARLGKTWKK 107
>gi|254797189|ref|YP_003082029.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
gi|254590427|gb|ACT69789.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
Length = 72
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VGF VTKK G AV+RN++RR+L+ + Y+ I ++F F +
Sbjct: 2 VGFIVTKKVGSAVKRNKVRRKLRALLPFLISMKKLLNRAYIFIPSPASVFSDFSAIREDV 61
Query: 103 VERVRRNKRSY 113
+ + R RS+
Sbjct: 62 LSCLERAGRSH 72
>gi|239918806|ref|YP_002958364.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|281414967|ref|ZP_06246709.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|133181|sp|P21172|RNPA_MICLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494112|sp|C5C7X2|RNPA_MICLC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|455290|gb|AAA25313.1| ribonuclease P (rnpA) [Micrococcus luteus]
gi|239840013|gb|ACS31810.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
Length = 132
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSL--------EVLNNNNSNLLPRVGFTVTKKQG 52
+ ++ +F + + R G + + + + S PR GF V+K G
Sbjct: 2 LPRDRRVRTPAEFRHLGRTGTRAGRRTVVVSVATDPDQTRSTSPSAPRPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK--RDALFIPFKELCNHFVERVRRNK 110
AV RNR++RRL+ V ++ + A + L V + +
Sbjct: 62 NAVTRNRVKRRLRAVVAEQMRLPPLRDLPVLVQVRALPAAAEADYALLRRETVGALGKAL 121
Query: 111 RSYYSG 116
+ +
Sbjct: 122 KPHLPA 127
>gi|239980789|ref|ZP_04703313.1| RNase P component [Streptomyces albus J1074]
gi|291452648|ref|ZP_06592038.1| ribonuclease P protein component [Streptomyces albus J1074]
gi|291355597|gb|EFE82499.1| ribonuclease P protein component [Streptomyces albus J1074]
Length = 123
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQG 52
+ + L++R FA V++G P + + + + R GF V+K G
Sbjct: 2 LPSENRLRRREDFATAVRRGRRAGRPALVVHLRSGVTDPHASGEESPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R ++R+L+ +R L G V+ A A +L + R
Sbjct: 62 GAVVRTAVKRKLRHLMRERLSR-LPEGSLVVVRALPPAGDADHAQLARDLDAALER 116
>gi|120437641|ref|YP_863327.1| ribonuclease P protein component [Gramella forsetii KT0803]
gi|117579791|emb|CAL68260.1| ribonuclease P protein component [Gramella forsetii KT0803]
Length = 130
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKH---GH 80
P + + NN+ N R G +V KK AV+RNR++R ++E R V K +
Sbjct: 31 PLKLVYIPINNSENPELRTGVSVPKKLVKTAVKRNRIKRLMREVYRKNKYLVTKDLVSSY 90
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++ I + +++L ++ + R + ++
Sbjct: 91 AFMFI-HISREEMTYEKLEQSMIKILERFREKIHT 124
>gi|315654391|ref|ZP_07907299.1| ribonuclease P protein component [Mobiluncus curtisii ATCC 51333]
gi|315491426|gb|EFU81043.1| ribonuclease P protein component [Mobiluncus curtisii ATCC 51333]
Length = 127
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGRHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR G V AK + + L N +R+ + ++F
Sbjct: 62 IKRRLRHLVRDRIAEF-PAGSLNVFYAKAGIAEVDYPRLENQIQILLRKMAHKQHGDRDF 120
>gi|119503571|ref|ZP_01625654.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
gi|119460633|gb|EAW41725.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
Length = 123
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
L + N + R+G + KK AV+RNR++R +E R + LKH
Sbjct: 30 RAGSKHALLLTIPNPS---HSRLGLIIAKKNVRLAVQRNRIKRVAREFFRSTS---LKHP 83
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D VL+AKRD + ++L F ++ R+
Sbjct: 84 RDIVLLAKRDLAELDNQQLRVLFSTLWQKIDRAQK 118
>gi|157803528|ref|YP_001492077.1| ribonuclease P [Rickettsia canadensis str. McKiel]
gi|229470484|sp|A8EY59|RNPA_RICCK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157784791|gb|ABV73292.1| ribonuclease P [Rickettsia canadensis str. McKiel]
Length = 118
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQ-GCAV 55
+I LK +++F L+ K G+ +F L + N + +G V+KK AV
Sbjct: 2 SITSLKNQKEFELINKLGKKFHERYFILVIAKNLPKIFLETKYNIFLGIKVSKKLNKKAV 61
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHD--YVLIAKRDALFIPFKELCNHFVERVRRN 109
RN+++RR++ +R+ ++I ++ I F L + + +N
Sbjct: 62 VRNKIKRRIRHLIRMNVSDSKLKAIKLAMIIIPRKGFEEINFSHLNDELSNIILKN 117
>gi|269140893|ref|YP_003297594.1| RNase P protein component [Edwardsiella tarda EIB202]
gi|267986554|gb|ACY86383.1| RNase P protein component [Edwardsiella tarda EIB202]
gi|304560652|gb|ADM43316.1| Ribonuclease P protein component [Edwardsiella tarda FL6-60]
Length = 81
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 36 NSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
NS PR+G TV KK A ERNR++R +E+ RL D+V+I K+ +
Sbjct: 2 NSLGYPRIGLTVAKKHVKRAHERNRIKRLTRESFRL--RQHSLPAMDFVVIVKKGVQELD 59
Query: 95 FKELCNHFVERVRRNKRSYY 114
+ L + RR+ R
Sbjct: 60 NRALTEMLEKLWRRHCRQAR 79
>gi|89897985|ref|YP_515095.1| ribonuclease P [Chlamydophila felis Fe/C-56]
gi|123483805|sp|Q255T8|RNPA_CHLFF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|89331357|dbj|BAE80950.1| ribonuclease P protein component [Chlamydophila felis Fe/C-56]
Length = 139
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KR+QF + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRKQFLYISRTGSHCQGSQVIFQVAPSKYPGCCKLGITVSKKFGKAHKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + V++ K F++L F +++
Sbjct: 66 KRLVREAFR--QKRHSLPACQIVVMPKNKQQPR-FRDLLQDFSQQI 108
>gi|260553774|ref|ZP_05826044.1| ribonuclease P protein component [Acinetobacter sp. RUH2624]
gi|260405078|gb|EEW98578.1| ribonuclease P protein component [Acinetobacter sp. RUH2624]
Length = 131
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
+ V G L K L R+G V KK A ERNR++R +E+ R
Sbjct: 17 ADYKSVFDGALFKVHQPHFLFLAKFTEQPNSRLGIVVAKKKVRRAHERNRIKRLARESFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L D V++ K I EL ++ +R
Sbjct: 77 LNQPKFGLD-IDVVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|328956380|ref|YP_004373713.1| ribonuclease P protein component [Coriobacterium glomerans PW2]
gi|328456704|gb|AEB07898.1| ribonuclease P protein component [Coriobacterium glomerans PW2]
Length = 110
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ + F V +G P + + ++ RV F K+ GCA RNR +R
Sbjct: 1 MRTIASHSDFERVFSRGYRLNHPLMRMVICRLDDEGAPGRVAFAAAKRLGCAPRRNRAKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++ R G G D +L A R +L + R +
Sbjct: 61 VMRACARNL--GFPVQGFDVILFATRATGSASQADLTSALTSLCGRAGMHAH 110
>gi|114332117|ref|YP_748339.1| ribonuclease P protein component [Nitrosomonas eutropha C91]
gi|122313201|sp|Q0AE58|RNPA_NITEC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114309131|gb|ABI60374.1| ribonuclease P protein component [Nitrosomonas eutropha C91]
Length = 121
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
+ C L+K +F V + + L + ++ R+G V KK AV RN
Sbjct: 9 LPKSCRLRKADEFRAVLRHRTVFESLSLRLHIKLKPINDGYARIGLIVAKKIERKAVRRN 68
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R++R ++EA R + G D V+ +R + V + + R
Sbjct: 69 RIKRLIREAFRKH--RQVVQGMDCVMQLRRSVEPSDSARIYQEAVTLLHKAAR 119
>gi|169634941|ref|YP_001708677.1| RNase P C5 component [Acinetobacter baumannii SDF]
gi|238688229|sp|B0VQP7|RNPA_ACIBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169153733|emb|CAP02934.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter baumannii]
Length = 131
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S ++ + V L K L R+G V KK A ERNR+
Sbjct: 8 STDLRIRCAADYKSVFDDALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E+ RL D V++ K I EL ++ +R
Sbjct: 68 KRLARESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQR 117
>gi|152968451|ref|YP_001364235.1| ribonuclease P protein component [Kineococcus radiotolerans
SRS30216]
gi|189043737|sp|A6WGN2|RNPA_KINRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151362968|gb|ABS05971.1| ribonuclease P protein component [Kineococcus radiotolerans
SRS30216]
Length = 120
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 39/103 (37%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ + F + K R G + + RVGF V+K G +V R+R +RRL+
Sbjct: 7 RLRHKDDFTVALKNGARAGTRRLVLHWAVTDRAHPTRVGFVVSKAVGGSVVRHRTQRRLR 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ G V+ A A EL +RR
Sbjct: 67 HVAAGRLTTLPALGGLLVVRALPAAGTATSAELAVDVDRGLRR 109
>gi|291303916|ref|YP_003515194.1| ribonuclease P protein [Stackebrandtia nassauensis DSM 44728]
gi|290573136|gb|ADD46101.1| ribonuclease P protein [Stackebrandtia nassauensis DSM 44728]
Length = 89
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
++ + R GF V+K G AV RN+++RRL+ G +G D V+ A A
Sbjct: 6 ATRDDETARGARAGFIVSKAVGPAVTRNKVKRRLRHLAAPRLAGW-PNGTDVVVRALPAA 64
Query: 91 LFIPFKELCNHFVERVRRNKRSYY 114
I F+ L E + RS
Sbjct: 65 ATISFQRLSRDVDEALAILSRSRR 88
>gi|262374717|ref|ZP_06067989.1| ribonuclease P [Acinetobacter junii SH205]
gi|262310373|gb|EEY91465.1| ribonuclease P [Acinetobacter junii SH205]
Length = 131
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 10 SRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRL 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL D V++ K I KEL ++ +R
Sbjct: 70 ARESFRLHQAQF-DADIDIVVMPKVGIEAIANKELHQQLDFAWQKLQR 116
>gi|270158406|ref|ZP_06187063.1| ribonuclease P protein component [Legionella longbeachae D-4968]
gi|269990431|gb|EEZ96685.1| ribonuclease P protein component [Legionella longbeachae D-4968]
Length = 96
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
+ F + NN R+G ++KK A +RNR++R L+E+ R
Sbjct: 4 QASKIVTSEFIILYRKNNLG--YARLGLALSKKMIAKAHDRNRIKRLLRESFRYEE---- 57
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
D + +A++ + + ++
Sbjct: 58 LPSVDIIFLARQGVAKQTNANINARLGKTWKK 89
>gi|75909639|ref|YP_323935.1| ribonuclease P [Anabaena variabilis ATCC 29413]
gi|123608788|sp|Q3M7J6|RNPA_ANAVT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|75703364|gb|ABA23040.1| ribonuclease P protein component [Anabaena variabilis ATCC 29413]
Length = 140
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN-------------------NNNSNLL 40
+ LK R F V + G R F+L L +
Sbjct: 3 LPKANRLKSRHDFQAVFREGLRRNSSHFTLRALKPSSAKKSSLDTAAKTQPADDVQDIPS 62
Query: 41 PRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KE 97
+G +++ K AV RNR++R++ A++ L G V+I K A ++
Sbjct: 63 TLIGVSISTKVSKRAVVRNRIKRQITAAMQQLLPR-LAPGWKLVVIVKPTAAESKCGSQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAQTE 134
>gi|94676620|ref|YP_588603.1| ribonuclease P protein component [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166226701|sp|Q1LTW1|RNPA_BAUCH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|94219770|gb|ABF13929.1| ribonuclease P protein component [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 115
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S L K FA V + + +L N+ + PRVG + KK A ERN +
Sbjct: 7 SRNLRLLKPDHFAFVFQKPKLVRIQ-QMVILGRINTLVYPRVGMIIAKKYIKLAHERNHI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R ++E+ RL + D+++IAK + ++ + R R
Sbjct: 66 KRLIRESFRLNQHKLCI--MDFIIIAKSGLTKMNNFDIIKALEKLWHRYYR 114
>gi|330813523|ref|YP_004357762.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486618|gb|AEA81023.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
IMCC9063]
Length = 119
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 10 RRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-VGFTV--TKKQGCAVERNRMRRRLKE 66
+F + K + F++ R V + KK G AV+RN++RRRLK
Sbjct: 13 NTEFKQILKSKKIISKLFTIYYRKLEQELSNNRKVVLSCVSAKKLGNAVKRNKIRRRLKM 72
Query: 67 AVR---LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A R + + Y + AK F+ L + +
Sbjct: 73 ATRKAIVELSSSFNKKYKYAIFAKAKVYDENFQNLVEELKSKFKEA 118
>gi|289705894|ref|ZP_06502273.1| ribonuclease P protein component [Micrococcus luteus SK58]
gi|289557379|gb|EFD50691.1| ribonuclease P protein component [Micrococcus luteus SK58]
Length = 132
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSL--------EVLNNNNSNLLPRVGFTVTKKQG 52
+ ++ +F + + R G + + + + S PR GF V+K G
Sbjct: 2 LPRDRRVRTPAEFRHLGRTGTRAGRRTVVVSVATDPDQTRSTSPSAPRPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK--RDALFIPFKELCNHFVERVRRNK 110
AV RNR++RRL+ V ++ + A + L V + +
Sbjct: 62 NAVTRNRVKRRLRAVVADQMRLPPLRDLPVLVQVRALPAAAEADYALLRRETVGALGKAL 121
Query: 111 RSYYSG 116
+ +
Sbjct: 122 KPHLPA 127
>gi|256381075|ref|YP_003104735.1| ribonuclease P protein [Actinosynnema mirum DSM 43827]
gi|255925378|gb|ACU40889.1| ribonuclease P protein [Actinosynnema mirum DSM 43827]
Length = 81
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ +VGF V+K G +V R+R+ RRL+ +R L G V+ A A E
Sbjct: 9 DAESKVGFVVSKAVGNSVVRHRVSRRLRHVLRDRLAS-LPAGSSLVVRALPPAATASSAE 67
Query: 98 LCNHFVERVRRNKR 111
L +RR R
Sbjct: 68 LAEDVDAALRRLVR 81
>gi|88705402|ref|ZP_01103113.1| Bacterial ribonuclease P protein [Congregibacter litoralis KT71]
gi|88700492|gb|EAQ97600.1| Bacterial ribonuclease P protein [Congregibacter litoralis KT71]
Length = 119
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+ V K K L +L N R+G V KK AV+RN ++R +E R
Sbjct: 16 DYRQVFKAPDHKAGQKELLLLARQNDLTCHRLGLAVAKKHVPTAVKRNVIKRLTREHFRA 75
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ D V++ + A + + V++ R
Sbjct: 76 LSPST--PSFDIVVLTRPGARDATATRIKDALVKQFTR 111
>gi|254522055|ref|ZP_05134110.1| ribonuclease P, protein component [Stenotrophomonas sp. SKA14]
gi|219719646|gb|EED38171.1| ribonuclease P, protein component [Stenotrophomonas sp. SKA14]
Length = 121
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 37 SNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
++ R+G V++K AV RNR++R L++ +R + D+V++A+ A
Sbjct: 13 ADRPARLGLAVSRKVDPNAVGRNRIKRVLRDILRQTRTEIQPG--DFVVVARSAARSASN 70
Query: 96 KELCNHF 102
E+ F
Sbjct: 71 DEIRQAF 77
>gi|239906117|ref|YP_002952856.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
gi|239795981|dbj|BAH74970.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
Length = 85
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVE 104
++KK G AV RNR++R ++E RLCA + G D V++AK+ D + + +
Sbjct: 3 ISKKVGNAVARNRVKRVVRECFRLCAPQAV-AGLDVVVVAKKCLDPRRLDLHQAISDLRP 61
Query: 105 RVRRNKR 111
+ R +
Sbjct: 62 LLIRMAK 68
>gi|87310425|ref|ZP_01092555.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
gi|87286924|gb|EAQ78828.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
Length = 125
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L + QF V G+ + + N L PR+G V+KK G AV RNR +RRL+
Sbjct: 14 RLLRTAQFDQVFAGKCSSADGILVVYIA-PNDQLGPRIGLVVSKKVGNAVRRNRWKRRLR 72
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
EA R+ L D ++I + A+ P + LC VE RR ++
Sbjct: 73 EAFRIQQAR-LPENCDLIVIPR-AAIEPPLERLCRSLVETARRARKK 117
>gi|254515872|ref|ZP_05127932.1| ribonuclease P protein component [gamma proteobacterium NOR5-3]
gi|219675594|gb|EED31960.1| ribonuclease P protein component [gamma proteobacterium NOR5-3]
Length = 116
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
++ V K K L +L +N R+G V KK AV+RN ++R +E R
Sbjct: 12 ADYSQVFKDPDHKAGQKELLLLARHNDLAQHRLGLAVAKKHVPTAVKRNIIKRLAREQFR 71
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ A+ D V++ + A + ++ R
Sbjct: 72 VLAQET--PAMDIVVLTRPGARDASSTHIKEALKKQFAR 108
>gi|94501618|ref|ZP_01308135.1| ribonuclease P [Oceanobacter sp. RED65]
gi|94426301|gb|EAT11292.1| ribonuclease P [Oceanobacter sp. RED65]
Length = 127
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L + V G K + +L N R+G V KK AV+RN++
Sbjct: 7 PRQVRLLTAGDYRRVFDGADAKAQTKQILILARRNDLGFARLGLIVAKKHAKRAVDRNQI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + D V++++ A + +L H V+++ R+ + + S
Sbjct: 67 KRIVRESFRHHQTEL--ENFDCVVLSRAGAKDLDKDQL-RHMVDQLWTRLRTSHGHRPRS 123
Query: 121 RKS 123
+KS
Sbjct: 124 KKS 126
>gi|17230905|ref|NP_487453.1| ribonuclease P [Nostoc sp. PCC 7120]
gi|21542219|sp|Q8YRN1|RNPA_ANASP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|17132546|dbj|BAB75112.1| ribonuclease P [Nostoc sp. PCC 7120]
Length = 140
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSN-------------------LL 40
+ LK R F V + G R F+L L +++
Sbjct: 3 LPKANRLKSRHDFQAVFREGLRRNSSHFTLRALKPSSARKSSLDTAAQTQPVDEVQNIPS 62
Query: 41 PRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KE 97
+G +++ K AV RNR++R++ A++ L G V+I K A ++
Sbjct: 63 TLIGVSISTKVSKRAVVRNRIKRQITAAMQQLLPR-LAPGWKLVVIVKPTAAESKCGSQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAQTE 134
>gi|224437879|ref|ZP_03658826.1| ribonuclease P [Helicobacter cinaedi CCUG 18818]
gi|313144328|ref|ZP_07806521.1| ribonuclease P protein [Helicobacter cinaedi CCUG 18818]
gi|313129359|gb|EFR46976.1| ribonuclease P protein [Helicobacter cinaedi CCUG 18818]
Length = 147
Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 20/115 (17%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP-R----------------VGFTVT 48
LK + +F + K + F L L ++ R VG +++
Sbjct: 6 LKNKTEFDFIYKNAQRFFHKNFVLYALQISSIKPNNFRTQKFVDSLSSHNAEVYVGLSIS 65
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+K G A RN ++RRLK + + + +V++A+ + F L +
Sbjct: 66 RKVGKACVRNLLKRRLKAIMYENRTKL--QDYIFVIVARESIILADFATLQRDIL 118
>gi|145297092|ref|YP_001139913.1| ribonuclease P [Corynebacterium glutamicum R]
gi|166226716|sp|A4QIE5|RNPA_CORGB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|140847012|dbj|BAF56011.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 133
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 16/119 (13%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTVTKKQGCAVERN 58
QF V +KG + + ++ S PR G V+K G AV R+
Sbjct: 13 QFRTVMRKGRRAGSKTVVVHLWDSAESLDGTEKQGEVASFGGPRFGLVVSKAVGNAVVRH 72
Query: 59 RMRRRLKEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R RRL+ + +L H V+ A A P EL + + R
Sbjct: 73 RTSRRLRHICASIVEKSPELLSPTHHVVIRALAGAGNAPSAELERDIRYGLGKTSRVRT 131
>gi|34499861|ref|NP_904076.1| ribonuclease P [Chromobacterium violaceum ATCC 12472]
gi|48474348|sp|Q7NPT6|RNPA_CHRVO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|34105711|gb|AAQ62065.1| ribonuclease P [Chromobacterium violaceum ATCC 12472]
Length = 121
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K +F+ V ++ F +V N RVG V KK AV RN ++R +
Sbjct: 11 RLLKTDEFSSVFSLRQQRSNAFF-QVFARPNGLDHARVGLVVGKKVAKRAVRRNYIKRCV 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E RL +G+ G DYV+ AK E + R S
Sbjct: 70 REWFRLNQQGL--DGVDYVVRAKTAFTREQRAEAVTALQALFAKLARCRAS 118
>gi|315638578|ref|ZP_07893752.1| ribonuclease P protein component [Campylobacter upsaliensis JV21]
gi|315481202|gb|EFU71832.1| ribonuclease P protein component [Campylobacter upsaliensis JV21]
Length = 107
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V K G+ L L N +KK G AV RNR +R L+
Sbjct: 11 EFVAVYKSGKKWFCDGLILFYLPANERKRA----VVASKKVGKAVVRNRAKRVLRALFAK 66
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E LK+G YVL+AK D F +L ++R +
Sbjct: 67 V-ENDLKNGK-YVLVAKADLNEFSFLKLEKSLKWGLKRIQ 104
>gi|115372275|ref|ZP_01459585.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
gi|115370740|gb|EAU69665.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
Length = 217
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +R +F V+ G +K P L L N R+G T++ K G AV R R+R
Sbjct: 99 PKALRLLRRHEFLQVQ-GSGQKIPSDCLLALVKRNGRAHSRLGLTISSKVGNAVVRVRLR 157
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R L+E R G D VL+ + A F E+ F R+ +R + +
Sbjct: 158 RLLRECFRKRRAQW-PQGLDVVLVVRASANEAAFTEVSRAFDGVTRKLQRLFPAASG 213
>gi|71066700|ref|YP_265427.1| ribonuclease P protein component [Psychrobacter arcticus 273-4]
gi|71039685|gb|AAZ19993.1| ribonuclease P protein component [Psychrobacter arcticus 273-4]
Length = 123
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVRLC 71
F V RK L N++ PRVG +TK K AV RN ++R+++E R+
Sbjct: 25 FREVFDAPERKLHQSHLMAFVRTNTHEQPRVGMAITKRKVPTAVTRNLIKRQIREQFRV- 83
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ D V I K + KEL ++ ++
Sbjct: 84 -KAFSLENKDVVFIIKNSVKGLSNKELKTEINNIFKKIEKK 123
>gi|253997711|ref|YP_003049775.1| ribonuclease P [Methylotenera mobilis JLW8]
gi|253984390|gb|ACT49248.1| ribonuclease P protein component [Methylotenera mobilis JLW8]
Length = 136
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
L K +F+ V R F L V N+ PR+G V KK AV RN MRR L+
Sbjct: 12 LIKTDEFSSVFNFRKRIFAQF-LAVHYQPNALARPRLGLVVGKKTAKSAVHRNYMRRVLR 70
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
E RL + + D V+ ++ F + F +++ +
Sbjct: 71 EFFRLHQQSINP--LDLVVRVQKKFNKKDFLAVVQEFDSLLKKVNQRTS 117
>gi|254818677|ref|ZP_05223678.1| ribonuclease P [Mycobacterium intracellulare ATCC 13950]
Length = 112
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 3/100 (3%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLL--PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
VK G P + + P VG V K G AVER+R+ RRL+ R
Sbjct: 10 TVKHGIRMAQPDIVVHFRRETDGGDATAPHVGLVVGKPVGSAVERHRVARRLRHVARTIL 69
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ V+ A + L +RR +
Sbjct: 70 GDLQDSDR-LVIRALPSSRTASSARLEQELRRCLRRMPAT 108
>gi|118472073|ref|YP_891137.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
gi|118173360|gb|ABK74256.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
Length = 123
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 14/124 (11%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLN------------NNNSNLLPRVGFTVTKKQGC 53
+++ +F V +G P + L ++ PR+G V+K G
Sbjct: 1 MRRSAEFSVTVSRGVRAAQPDVVVHALRLESNAGNAGDDGDDGDANGPRIGLIVSKAVGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AVER+R+ RRL+ + G+ V+ A+ + L + + R
Sbjct: 61 AVERHRVSRRLRHVAKTFVSGLDPADL-IVIRARPSSRDATSSRLERQLGQALERVSSKR 119
Query: 114 YSGK 117
+
Sbjct: 120 RASP 123
>gi|91777108|ref|YP_546864.1| ribonuclease P [Methylobacillus flagellatus KT]
gi|91711095|gb|ABE51023.1| ribonuclease P protein component [Methylobacillus flagellatus KT]
Length = 127
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
L K +F+ V R + L + +N R+G V +K AV+RN ++R ++
Sbjct: 14 LLKTDEFSSVFNFRKRVSGQY-LVLHYRHNELAYARLGLVVGRKTARRAVDRNYIKRVMR 72
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
E R+ + G D V R F E+ F E V + +R S +
Sbjct: 73 ELFRVNQHQL--PGLDLVARPHRMFGRQQFAEIEQEFTELVAKLQRKLASRQEQP 125
>gi|310825629|ref|YP_003957987.1| ribonuclease p protein component [Stigmatella aurantiaca DW4/3-1]
gi|309398701|gb|ADO76160.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
Length = 134
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +R +F V+ G +K P L L N R+G T++ K G AV R R+R
Sbjct: 16 PKALRLLRRHEFLQVQ-GSGQKIPSDCLLALVKRNGRAHSRLGLTISSKVGNAVVRVRLR 74
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R L+E R G D VL+ + A F E+ F R+ +R + +
Sbjct: 75 RLLRECFRKRRAQW-PQGLDVVLVVRASANEAAFTEVSRAFDGVTRKLQRLFPAASG 130
>gi|315225753|ref|ZP_07867541.1| ribonuclease P protein component [Parascardovia denticolens DSM
10105]
gi|315119885|gb|EFT83017.1| ribonuclease P protein component [Parascardovia denticolens DSM
10105]
Length = 150
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 33/150 (22%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLN-------------------------NNNS 37
+ LK R F V K L N +S
Sbjct: 1 MERLKSHRDFVAVLKHRRKVSTRDLVLHYRLQDLSSGLSSPADSQREVADPSPKGFNGSS 60
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-------YVLIAKRDA 90
+ +G V+K G AVERN+++RR + R + + D V+ AK
Sbjct: 61 DQPIYLGLAVSKAVGHAVERNKVKRRFRVLARKYEPLLAQALKDRPGTRLSLVMRAKPQT 120
Query: 91 LFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+PF +L + + R
Sbjct: 121 AHVPFADLDQQVEKAFVKLVRQMNGSDGRP 150
>gi|294101693|ref|YP_003553551.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
gi|293616673|gb|ADE56827.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
Length = 123
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKK ++ V + G KG L + + R+G V K+QG A RNR RR L
Sbjct: 2 RLKKGWEYDYVFRTGSRFKGELVRLLFVEAPDDRT--RIGLAVGKRQGSACVRNRGRRIL 59
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KE++R +K V + L ++ + V + R
Sbjct: 60 KESIRRILP-WVKGTWWCVFSLRTAGLEANAYDVYDDMVALLGR 102
>gi|119475235|ref|ZP_01615588.1| ribonuclease P [marine gamma proteobacterium HTCC2143]
gi|119451438|gb|EAW32671.1| ribonuclease P [marine gamma proteobacterium HTCC2143]
Length = 128
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S L + + V K + L N + PR+G + KK A +RNR+
Sbjct: 7 SKSQRLLEASAYKSVFDDARLKASRQQVLFLARPNDLINPRLGLVIAKKNVRKANQRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + D V++A+R + +L F + + ++ N
Sbjct: 67 KRIIRESFRLKQHRL--SNIDTVVLARRGLDQLSNADLHTLFGQLWHQLQQKADKLANQP 124
Query: 121 R 121
+
Sbjct: 125 K 125
>gi|258544270|ref|ZP_05704504.1| ribonuclease P protein component [Cardiobacterium hominis ATCC
15826]
gi|258520508|gb|EEV89367.1| ribonuclease P protein component [Cardiobacterium hominis ATCC
15826]
Length = 118
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN-NNSNLLPRVGFTVTKK-QGCAVERNR 59
L +R F V + RK VL + R+G + K+ A ERNR
Sbjct: 6 PRTARLTQRADFDRVFQAPERKSSDRCFTVLGRCRLQDGAARLGLVIAKRQIRRAHERNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R ++E+ R + D ++IA+ A + +R
Sbjct: 66 IKRLVRESFR-QLPARERAALDIIVIARHAAEEHDNAAIARALARHWQR 113
>gi|329894827|ref|ZP_08270627.1| Ribonuclease P protein component [gamma proteobacterium IMCC3088]
gi|328922721|gb|EGG30055.1| Ribonuclease P protein component [gamma proteobacterium IMCC3088]
Length = 137
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L + + V K S +L + R+G + KK AV RNR++R+
Sbjct: 15 RLLTKSDYQHVFDNAPFKASSQSFLLLAKPSLGDTSRLGLVIAKKHIKTAVGRNRVKRQA 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+E R EG L D +L+A+ A + K + + + + + + RK+
Sbjct: 75 RELFRCQKEGALP--LDMILLARSGAGSLDTKFIRIAITKMIEKVQTQASRNVSEHRKA 131
>gi|15828624|ref|NP_325984.1| ribonuclease P protein component (protein C5) (RNase P) [Mycoplasma
pulmonis UAB CTIP]
gi|21542223|sp|Q98R57|RNPA_MYCPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14089566|emb|CAC13326.1| RIBONUCLEASE P PROTEIN COMPONENT (PROTEIN C5) (RNASE P) [Mycoplasma
pulmonis]
Length = 111
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M I ++K +F + + + + NN ++G ++ KK AV+RN
Sbjct: 1 MKKIYHIRKNWEFQAIINSKRQVISKNLIFYYQRNN---TFKIGVSIPKKFAGAVKRNFY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R++ +R + + V+I +++ + + F E + + R K
Sbjct: 58 KRQIMAILRDIQDLTNLE-YKIVMIVRKNFMALDFLEKKKEIQKMLERFKNEKRK 111
>gi|269977739|ref|ZP_06184699.1| ribonuclease P protein component [Mobiluncus mulieris 28-1]
gi|306817499|ref|ZP_07451243.1| ribonuclease P protein component [Mobiluncus mulieris ATCC 35239]
gi|269934043|gb|EEZ90617.1| ribonuclease P protein component [Mobiluncus mulieris 28-1]
gi|304649723|gb|EFM47004.1| ribonuclease P protein component [Mobiluncus mulieris ATCC 35239]
Length = 117
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
++ + L K ++ LV ++G+ R F ++S R+G V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYP-ARIGLVVPKKSVRLATRRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR G G V +A+ A + ++EL + + +R
Sbjct: 61 LVKRRLRGAVREHL-GEFPPGSLTVFLARPAADKVAYRELDSQLESLIAGWQRPQQK 116
>gi|19554288|ref|NP_602290.1| ribonuclease P [Corynebacterium glutamicum ATCC 13032]
gi|62391946|ref|YP_227348.1| ribonuclease P [Corynebacterium glutamicum ATCC 13032]
gi|24638169|sp|Q8NL51|RNPA_CORGL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21325871|dbj|BAC00492.1| RNase P protein component [Corynebacterium glutamicum ATCC 13032]
gi|41223093|emb|CAF19038.1| RNase P protein component [Corynebacterium glutamicum ATCC 13032]
Length = 133
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 16/119 (13%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTVTKKQGCAVERN 58
QF V +KG + + ++ S PR G V+K G AV R+
Sbjct: 13 QFRTVMRKGRRAGSKTVVVHLWDSAESLDGTEKQGEVASFGGPRFGLVVSKAVGNAVVRH 72
Query: 59 RMRRRLK---EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R RRL+ ++ + +L H V+ A A EL + + R
Sbjct: 73 RTSRRLRHICASIAEKSPELLSPTHHVVIRALAGAGNATSAELERDIRYGLGKASRVRT 131
>gi|71894610|ref|YP_278718.1| ribonuclease P protein component [Mycoplasma synoviae 53]
gi|123643936|sp|Q4A5G4|RNPA_MYCS5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71851398|gb|AAZ44007.1| ribonuclease P protein component [Mycoplasma synoviae 53]
Length = 112
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F LV K + + + ++ +VG TV KK +V RN
Sbjct: 1 MKKQYRLRKNWEFDLVLKNKKFIANKYVIVYYKKASA---FKVGITVPKKFANSVGRNYH 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+R++K V ++ V+I +++ + F
Sbjct: 58 KRQMKAIVHKMNLYNYP--YEMVIIIRKNFINCNF 90
>gi|325983267|ref|YP_004295669.1| ribonuclease P protein component [Nitrosomonas sp. AL212]
gi|325532786|gb|ADZ27507.1| Ribonuclease P protein component [Nitrosomonas sp. AL212]
Length = 128
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
+ C L K +F+ + + + L++ N R+G V+KK A RNR
Sbjct: 13 LPKNCRLHKASEFSAIINSKCQISGD-LLQIYTKPNGLGYARLGLIVSKKFERHATRRNR 71
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
++R L+E R D+++ +R + K L
Sbjct: 72 IKRILRETFRRKRGRDKIKEMDWLIRLRRPMIKSESKGLVTEMQ 115
>gi|188996898|ref|YP_001931149.1| ribonuclease P protein component [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931965|gb|ACD66595.1| ribonuclease P protein component [Sulfurihydrogenibium sp. YO3AOP1]
Length = 84
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 35 NNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
N R F +KK +V+RNR +R L+EAVRL + +D + IAK+ L
Sbjct: 5 KNDQEKSRYAFVASKKNFKKSVDRNRAKRLLREAVRLRLNLLDNLKYDMIFIAKKSILNK 64
Query: 94 PFKELCNHFVERVRRNK 110
++ + + + K
Sbjct: 65 KIYDILSQLNTVIGKLK 81
>gi|46447237|ref|YP_008602.1| hypothetical protein pc1603 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400878|emb|CAF24327.1| hypothetical protein pc1603 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 109
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
++ R+Q+ + G R + + L N ++G TVT++ G A +RNR +R ++E
Sbjct: 1 MRTRKQYQRMANGSSRYIGRWIILDL-RFNDRSHSQLGITVTRRFGKAHQRNRFKRIVRE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
A RL + + + A +++ +E + + R Y
Sbjct: 60 AFRL-SHHTFPQALLLNVKPRTLAHQAKMQDIQAELMELINQAYRHYQK 107
>gi|291455690|ref|ZP_06595080.1| ribonuclease P protein component [Bifidobacterium breve DSM 20213]
gi|291382618|gb|EFE90136.1| ribonuclease P protein component [Bifidobacterium breve DSM 20213]
Length = 97
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++ R+G V+K G AV RN ++RR + + E L D V+ AK A
Sbjct: 19 DDRTTYRRLGLAVSKSVGNAVTRNTVKRRFRVLAKAHEES-LPPHCDIVVRAKPSAASAS 77
Query: 95 FKELCNHFVERVRRNKRS 112
F L F + R
Sbjct: 78 FSSLDEQFATGFAKVARK 95
>gi|54027646|ref|YP_121888.1| ribonuclease P [Nocardia farcinica IFM 10152]
gi|60390311|sp|Q5YMR7|RNPA_NOCFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54019154|dbj|BAD60524.1| putative RNase P component [Nocardia farcinica IFM 10152]
Length = 156
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 22/129 (17%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL------------------- 40
+ L R F+ V++G+ + + L
Sbjct: 2 LPEPYRLHHRADFSRTVRRGQRIGRRDLVVHAFVHTYDELAHATERHGDPVAAGSFVRVG 61
Query: 41 -PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
PR G V+K G AV R+R+ RRL+ + + D V+ A A EL
Sbjct: 62 GPRFGLIVSKAVGSAVVRHRVARRLRHMCATLVDE-VPADADVVIRALPGAATADSAELA 120
Query: 100 NHFVERVRR 108
+R+
Sbjct: 121 RQVRSGLRK 129
>gi|15616644|ref|NP_239856.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11134494|sp|P57130|RNPA_BUCAI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|25289268|pir||F84931 ribonuclease P (EC 3.1.26.5) protein component [imported] -
Buchnera sp. (strain APS)
gi|10038707|dbj|BAB12742.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 115
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
F V G ++K + +L N PR+G ++ +K A RN ++R ++E RL
Sbjct: 18 FQDVFNGSVKKKNTLEISILGRFNLLGHPRLGLSIPRKNIKHAHNRNLIKRLVRETFRLL 77
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+L D+V+IAK++ LF+ + +
Sbjct: 78 QYKLL--SMDFVVIAKKNILFLNNTRIIDMLNSLW 110
>gi|154174307|ref|YP_001408437.1| ribonuclease P protein component [Campylobacter curvus 525.92]
gi|112802936|gb|EAU00280.1| ribonuclease P protein component [Campylobacter curvus 525.92]
Length = 80
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+ ++ +KK G AV RNR +R L+ A L L+ G Y+++AK + I F
Sbjct: 5 KPSSENKLAVVASKKVGKAVVRNRAKRLLRAAF-LEVCDELEDGI-YIMVAKCGLIEISF 62
Query: 96 KELCNHFVERVRR 108
++ + +++
Sbjct: 63 DKIHKNLRWSLKK 75
>gi|120602962|ref|YP_967362.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
gi|120563191|gb|ABM28935.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
Length = 92
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ + R+G VT+K G AV+RNR++R L+E RL + VL D + + KR
Sbjct: 1 MERSADPEGWRLGLAVTRKTGTAVQRNRVKRVLREFFRLH-QHVLPDDADIIAVPKR 56
>gi|156741408|ref|YP_001431537.1| ribonuclease P protein component [Roseiflexus castenholzii DSM
13941]
gi|189043742|sp|A7NJ53|RNPA_ROSCS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156232736|gb|ABU57519.1| ribonuclease P protein component [Roseiflexus castenholzii DSM
13941]
Length = 122
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ Q+ V++ G L N + R GF V K+ G AV RNR
Sbjct: 1 MKRAYRLRTPEQYQRVRRDGRTWDAGMLMLNAAPNRR--RISRCGFIVAKRLGGAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRRN 109
+RRR++EAVRL + G D V IA+ AL I F +L ++R
Sbjct: 59 IRRRVREAVRLLYPQIA-PGWDMVFIARSPALAEIAFPQLQALVQRLLQRA 108
>gi|93004832|ref|YP_579269.1| ribonuclease P protein component [Psychrobacter cryohalolentis K5]
gi|92392510|gb|ABE73785.1| ribonuclease P protein component [Psychrobacter cryohalolentis K5]
Length = 123
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVRLC 71
F V RK L N++ PRVG +TK K AV RN ++R+++E R+
Sbjct: 25 FREVFDAPERKLHQSHLMAFVRTNTHEQPRVGMAITKRKVPTAVARNLIKRQVREQFRVK 84
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
A + D V I K + KE+ + ++ ++
Sbjct: 85 ASNL--ENKDIVFIVKSSVKGLSNKEIKMEVINIFKKIEKK 123
>gi|317051004|ref|YP_004112120.1| ribonuclease P protein component [Desulfurispirillum indicum S5]
gi|316946088|gb|ADU65564.1| ribonuclease P protein component [Desulfurispirillum indicum S5]
Length = 117
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+K RQF V + + V + V V+KK G AV RNR++
Sbjct: 7 PASLRLQKNRQFRAVYDAGKVVRSQYFVLVFLRAEQLKVGVV---VSKKVGNAVVRNRLK 63
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R ++EA R ++ + ++ A+ A + E + ++R K
Sbjct: 64 RLMREAFRRN-RKYIQGQYHIIMAARPPAAELKGPEAMSALEHLLQRAK 111
>gi|254496742|ref|ZP_05109601.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354037|gb|EET12713.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 114
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
+ L ++ + V + + F + NN R+G ++KK A +RNR
Sbjct: 5 NKTQRLLTKKDYNHVFEQAKKIVTSEFIILFRENNLG--YARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R ++E+ R D + +A++ + + +
Sbjct: 63 IKRLIRESFR----QKELPAVDMIFLARQGVAKQANSNINTRLGKSWEK 107
>gi|294155970|ref|YP_003560354.1| ribonuclease P, protein component [Mycoplasma crocodyli MP145]
gi|291599899|gb|ADE19395.1| ribonuclease P, protein component [Mycoplasma crocodyli MP145]
Length = 112
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F L++K + + + + +VG T+ KK AV RN
Sbjct: 1 MKKQYRLQKNWEFNDLIQKNKQFSNNYLVSYFERSES----LKVGITIPKKFANAVWRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+L+ + K +V I ++D L + + + + K
Sbjct: 57 YKRQLRAILHELNIYEFKFH--FVFIIRKDFLKAEYAIKKQSIQKMLEKFK 105
>gi|254424787|ref|ZP_05038505.1| ribonuclease P protein component [Synechococcus sp. PCC 7335]
gi|196192276|gb|EDX87240.1| ribonuclease P protein component [Synechococcus sp. PCC 7335]
Length = 148
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ L P G ++++K AV RNR++R+L +R + ++ + A+
Sbjct: 70 PKAVLGPHFGISISRKVSKRAVVRNRIKRQLLAIIRQYLPE-IDPAWQVAIVVRPAAVEC 128
Query: 94 PFKELCNHFVERVRR 108
F + +++
Sbjct: 129 SFDDFLRELECLLKK 143
>gi|54299009|ref|YP_125378.1| hypothetical protein lpp3076 [Legionella pneumophila str. Paris]
gi|148361344|ref|YP_001252551.1| ribonuclease P protein component [Legionella pneumophila str.
Corby]
gi|296108686|ref|YP_003620387.1| ribonuclease P protein component [Legionella pneumophila 2300/99
Alcoy]
gi|67461338|sp|Q5X0M0|RNPA_LEGPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226722|sp|A5IIK5|RNPA_LEGPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53752794|emb|CAH14229.1| hypothetical protein lpp3076 [Legionella pneumophila str. Paris]
gi|148283117|gb|ABQ57205.1| ribonuclease P protein component [Legionella pneumophila str.
Corby]
gi|295650588|gb|ADG26435.1| ribonuclease P protein component [Legionella pneumophila 2300/99
Alcoy]
Length = 114
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 8/112 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L K+ F V + + F N R+G ++KK A +RNR
Sbjct: 5 KKAQRLLKKNDFDFVFESAKKITTDDFIFLFRENKLG--YARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R L+E+ R D +++A+ + + +
Sbjct: 63 IKRLLRESFRHTN----LPAVDIIILARPGLAKKTNLGINTKLNKTWEKLAS 110
>gi|292493918|ref|YP_003529357.1| ribonuclease P protein component [Nitrosococcus halophilus Nc4]
gi|291582513|gb|ADE16970.1| ribonuclease P protein component [Nitrosococcus halophilus Nc4]
Length = 119
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V G+ G F+ VL +NS PR+G + +K AV+RNR++R ++E+ R
Sbjct: 17 DFKQVFAAGKRASGKAFT--VLYRSNSLDHPRLGMAIPRKHFSRAVDRNRIKRLIRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ G D V++++ +L + R
Sbjct: 75 QWQRVLG--GRDLVVLSRPGINQRSNSDLLRCLEGQWMRLIERR 116
>gi|303233457|ref|ZP_07320125.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
gi|302480465|gb|EFL43557.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
Length = 98
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G +G + + V+ N + RV F K+ G A RNR +R L+ AVR
Sbjct: 3 GRQLRGKY--VRVVYTNGTLPYARVAFAAGKRIGTAPLRNRCKRLLRAAVRNMVPTTFSA 60
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
G++++ A + + + + +
Sbjct: 61 GYNFLFFATSATQYAHPASIAKELTRLIGTIRDTKPP 97
>gi|317061938|ref|ZP_07926423.1| ribonuclease P protein component [Fusobacterium sp. D12]
gi|313687614|gb|EFS24449.1| ribonuclease P protein component [Fusobacterium sp. D12]
Length = 77
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
N+N + GF +KK G AV RNR++R +E V E VL ++ +AK+
Sbjct: 5 QKNNNFYNKYGFVASKKIGNAVCRNRIKRLFREFVNKN-ETVLPKSTTFIFVAKK 58
>gi|320103591|ref|YP_004179182.1| ribonuclease P protein component [Isosphaera pallida ATCC 43644]
gi|319750873|gb|ADV62633.1| ribonuclease P protein component [Isosphaera pallida ATCC 43644]
Length = 165
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRL 64
L+ +FA V + + V + N R+G +V K K A ER R +R +
Sbjct: 28 RLRAAAEFAAVFQHRKTCSDSILI-VYGHPNHRSEARLGLSVGKRKYRRAHERARFKRLV 86
Query: 65 KEAVRLC-AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
+EA RL A G L G DYV++ + L F ++ R R + R
Sbjct: 87 REAFRLARASGELPEGIDYVVVPRGGPLPR-FDQVRASLTHLCRGVARRLSLSVSGPR 143
>gi|126643004|ref|YP_001085988.1| RNase P [Acinetobacter baumannii ATCC 17978]
Length = 102
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
P F L R+G V KK A ERNR++R +E+ RL D V
Sbjct: 4 PHFL--FLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLARESFRLHQPKFG-SDIDVV 60
Query: 84 LIAKRDALFIPFKELCNHFVERVRRNKR 111
++ K I EL ++ +R
Sbjct: 61 VMPKVGIETITNAELYQQLDFAWQKLQR 88
>gi|54295841|ref|YP_128256.1| hypothetical protein lpl2932 [Legionella pneumophila str. Lens]
gi|67461333|sp|Q5WSE7|RNPA_LEGPL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53755673|emb|CAH17176.1| hypothetical protein lpl2932 [Legionella pneumophila str. Lens]
Length = 114
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
L K+ F V + + F N R+G ++KK A +RNR
Sbjct: 5 KKAQRLLKKNDFDFVFESAKKITTEDFIFLFRENKLG--YARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+E+ R D +++A+ + + +
Sbjct: 63 IKRLLRESFRHTN----LPAVDIIILARPGLAKKTNLGINTKLNKTWEK 107
>gi|163754530|ref|ZP_02161652.1| RNase P protein, subunit A [Kordia algicida OT-1]
gi|161325471|gb|EDP96798.1| RNase P protein, subunit A [Kordia algicida OT-1]
Length = 131
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKE 66
KK + G + K P + + + ++ + G +VTK+ AV RNR++R ++E
Sbjct: 14 KKCLDLLFSEGGAVSKFPLRLVYIATDLPKDVQIQAGVSVTKRRFKKAVTRNRIKRLMRE 73
Query: 67 AVRLCAEGVLKH-----GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A RL V ++ I K+ F+E+ + +++ + +
Sbjct: 74 AYRLHKNDVFNTISTSYAFMFLYIGKK---EPTFEEIEKSMIRLLQKFLEKTNTIDAPEK 130
Query: 122 K 122
+
Sbjct: 131 E 131
>gi|57242372|ref|ZP_00370311.1| ribonuclease P protein component [Campylobacter upsaliensis RM3195]
gi|57017052|gb|EAL53834.1| ribonuclease P protein component [Campylobacter upsaliensis RM3195]
Length = 107
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V K G+ L L N +KK G AV RNR +R L+
Sbjct: 11 EFVAVYKSGKKWFCDGLILFYLPTNERKRA----VVASKKVGKAVVRNRAKRVLRALFAK 66
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E L++G YVL+AK D F +L ++R +
Sbjct: 67 V-ENDLRNGK-YVLVAKADLNKFSFLKLEKSLKWGLKRIQ 104
>gi|319440489|ref|ZP_07989645.1| ribonuclease P protein component [Corynebacterium variabile DSM
44702]
Length = 102
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE-----GVLKHGHDYVLIAKRDALFIPF 95
PRVG V+K G AV R+ + RRL+ V + G L+ VL A A
Sbjct: 27 PRVGLVVSKAVGNAVTRHAVSRRLRHTVGRVLDDAEMAGTLRPDLSIVLRALPAAATATS 86
Query: 96 KELCNHFVERVRR 108
EL +RR
Sbjct: 87 GELERDVRHALRR 99
>gi|262273128|ref|ZP_06050945.1| ribonuclease P protein component [Grimontia hollisae CIP 101886]
gi|262222884|gb|EEY74192.1| ribonuclease P protein component [Grimontia hollisae CIP 101886]
Length = 69
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K+ AV+RNR +R ++E+ RL + DYV+IAK+ A + +EL + +R
Sbjct: 4 KQIKLAVDRNRFKRLVRESFRLHQHDL--PAKDYVVIAKKSANELSNEELSKLLDKLWQR 61
Query: 109 NKRSYYS 115
R
Sbjct: 62 LSRPPRK 68
>gi|32265614|ref|NP_859646.1| ribonuclease P [Helicobacter hepaticus ATCC 51449]
gi|48474805|sp|Q7VJX7|RNPA_HELHP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|32261662|gb|AAP76712.1| ribonuclease P [Helicobacter hepaticus ATCC 51449]
Length = 146
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 21/138 (15%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN-------------NNNSNLLPR---- 42
M+ + LK + +F V + + F L +L ++ R
Sbjct: 1 MARLDTLKNKAEFDFVYRNAQRFFHKDFVLYMLKFSSIRESYPLRQQRIFQSIQSRNAKL 60
Query: 43 -VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G +V++K G A RN ++RR+K ++++ K + F L N+
Sbjct: 61 HLGLSVSRKIGKAYMRNLIKRRIKAIAYENCADF--KDVIFLIVVKEGIREMDFATLKNN 118
Query: 102 FVERVRRNKRSYYSGKNF 119
+ + + +
Sbjct: 119 LLASFIKMYNAKKTRNIR 136
>gi|25029502|ref|NP_739556.1| ribonuclease P [Corynebacterium efficiens YS-314]
gi|29427799|sp|Q8FSU8|RNPA_COREF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23494791|dbj|BAC19756.1| putative ribonuclease P protein component [Corynebacterium
efficiens YS-314]
Length = 133
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEA---VRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
PR G V+K G AV R+R RRL+ + + +L H V+ A + ++
Sbjct: 55 PRFGLIVSKAVGNAVIRHRTSRRLRHVCARIAADSPELLTPTHHVVIRALAGSGQASSQD 114
Query: 98 LCNHFVERVRRNKRSYYS 115
L +R+ R
Sbjct: 115 LERDIRHGLRKAGRVRTD 132
>gi|284049401|ref|YP_003399740.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
gi|283953622|gb|ADB48425.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
Length = 112
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 13 FALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLC 71
F V KG + VL ++N ++G V K+ G AV RN+++RR++E R
Sbjct: 15 FQEVYEKGRSFADRYGVFYVLP--SANGQNQLGTAVGKRLGHAVLRNQVKRRMREVFRKE 72
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
LK H V +A+ P+ F R+
Sbjct: 73 QAR-LKGKHAIVWVARHRLAHAPYAVYEEVFRRLARKA 109
>gi|308234062|ref|ZP_07664799.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|328943459|ref|ZP_08240924.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|327491428|gb|EGF23202.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
Length = 105
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K ++ FA+V K G+ P + + S RV + KK GCA RNR +R
Sbjct: 1 MQTIKSKQDFAMVFKNGKRLFHPAVRIVFIP---STQTTRVAYCAPKKIGCAPLRNRCKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
L+ AVR + D ++ A EL + +
Sbjct: 58 LLRAAVRDI--PYVPQNFDVIMFATHKTKAYSSCELSKIVNKLLH 100
>gi|325926221|ref|ZP_08187579.1| ribonuclease P protein component [Xanthomonas perforans 91-118]
gi|325543403|gb|EGD14828.1| ribonuclease P protein component [Xanthomonas perforans 91-118]
Length = 94
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 47 VTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
V++K AV RNR++R L++A+R + G DYV++A+ A ++ + FV
Sbjct: 3 VSRKVDTRAVGRNRIKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRL 60
Query: 106 VRRN 109
+RR
Sbjct: 61 LRRA 64
>gi|157826004|ref|YP_001493724.1| ribonuclease P [Rickettsia akari str. Hartford]
gi|229470483|sp|A8GP91|RNPA_RICAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157799962|gb|ABV75216.1| ribonuclease P [Rickettsia akari str. Hartford]
Length = 118
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQ-GCAV 55
+I LK +++F L+ K G+ +F L + N S +G V++K AV
Sbjct: 2 SITSLKNQKEFELINKLGKKFHERYFILVIARNLPTIFLKSQYNTFLGIKVSRKLNKKAV 61
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDY--VLIAKRDALFIPFKELCNHFVERVRRN 109
RN+++RR++ VR+ + ++I ++ I F L + V RN
Sbjct: 62 IRNKIKRRIRHLVRIIVSDAKLSAVKFAMIIIPRKGFEEINFSHLNYELSKIVLRN 117
>gi|71891806|ref|YP_277535.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123641224|sp|Q494B8|RNPA_BLOPB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71795912|gb|AAZ40663.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 115
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
+ L +F V +K E K +L +N PR+G ++KK A ERN
Sbjct: 6 LPKRARLLNLNEFIFVFQKPERVKTTGITLFSRSNRLG--YPRIGLAISKKYVKYAHERN 63
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERV 106
R++R ++E R C +L D+VL + ++ ++ K L +
Sbjct: 64 RIKRHIRETFRTCQHNLLAK--DFVLTIRSKEIIYYKNKTLIQELEKLW 110
>gi|27904527|ref|NP_777653.1| ribonuclease P protein component [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29427592|sp|P59413|RNPA_BUCBP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27903924|gb|AAO26758.1| ribonuclease P protein component [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 114
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 8 KKRR-----QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMR 61
KKRR F V K + +L N R+G +V++K A +RN+++
Sbjct: 8 KKRRLITPNDFNYVFKSPNVIRC-KEITILGRLNLLSFSRLGISVSRKNVKYAYQRNKIK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E R+ ++ D+V+I ++ I FK L
Sbjct: 67 RLIRENFRIIQHRLVSS--DFVVIVNSSSMQISFKLLAKKLENLW 109
>gi|146329543|ref|YP_001209840.1| ribonuclease P protein component [Dichelobacter nodosus VCS1703A]
gi|146233013|gb|ABQ13991.1| ribonuclease P protein component [Dichelobacter nodosus VCS1703A]
Length = 116
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S L +R +F V ++ VL R+G V K+ A ERNR+
Sbjct: 9 SKNARLTQRGEFDRVFATPDQRSSDRYFTVLGRFCGEERARLGIIVAKRHIARAHERNRV 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+R ++E+ R + K D V++A+ A EL +
Sbjct: 69 KRVVRESFR---QYRFKKLLDLVVLARASAQTATNDELQRSLARHWK 112
>gi|225077256|ref|ZP_03720455.1| hypothetical protein NEIFLAOT_02311 [Neisseria flavescens
NRL30031/H210]
gi|224951400|gb|EEG32609.1| hypothetical protein NEIFLAOT_02311 [Neisseria flavescens
NRL30031/H210]
Length = 113
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V + R+ + +N+ PR+G V+KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++ RL + HD+V+ ++ E N + +++ +
Sbjct: 70 RDWFRLNQHQL--PPHDFVVRVRQAFNRETAPEARNQLAQLMKKRR 113
>gi|269468579|gb|EEZ80228.1| RNase P protein component [uncultured SUP05 cluster bacterium]
Length = 113
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + K ++A + KG + +V+ PR+G ++KK AV+RNR
Sbjct: 5 LTREARILKAHEYAHIFKGGKLAKGSYW-QVIAKPIKKSNPRLGLAISKKVHRLAVDRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E R + D+V++A++ F L N ++ ++ +
Sbjct: 64 FKRIARETFRCEKNNL--KNWDFVVMARKSRPAKNFI-LSNELIDLFKKVTK 112
>gi|259508316|ref|ZP_05751216.1| ribonuclease P protein component [Corynebacterium efficiens YS-314]
gi|259164134|gb|EEW48688.1| ribonuclease P protein component [Corynebacterium efficiens YS-314]
Length = 116
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEA---VRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
PR G V+K G AV R+R RRL+ + + +L H V+ A + ++
Sbjct: 38 PRFGLIVSKAVGNAVIRHRTSRRLRHVCARIAADSPELLTPTHHVVIRALAGSGQASSQD 97
Query: 98 LCNHFVERVRRNKRSYYS 115
L +R+ R
Sbjct: 98 LERDIRHGLRKAGRVRTD 115
>gi|94312546|ref|YP_585756.1| ribonuclease P protein component [Cupriavidus metallidurans CH34]
gi|93356398|gb|ABF10487.1| Ribonuclease P protein component (modular protein) [Cupriavidus
metallidurans CH34]
Length = 385
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 38/131 (29%), Gaps = 13/131 (9%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N R+G V KK A ERN
Sbjct: 244 PKAARLTKTDEFSSVFALRPRRRTTHFVLYV--RANGQAQARLGIVVGKKFAPRAAERNL 301
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF-------KELCNHFVERVRRNKRS 112
++R ++E R G D +L + F K + +
Sbjct: 302 VKRMVRELFRSRQAQFA--GRDILLRLQAKFPRAEFSSRVAIRKACHAEISGLLDVAAKP 359
Query: 113 YYSGKNFSRKS 123
Sbjct: 360 LPVAPAVPTAP 370
>gi|313679790|ref|YP_004057529.1| ribonuclease p protein component [Oceanithermus profundus DSM
14977]
gi|313152505|gb|ADR36356.1| ribonuclease P protein component [Oceanithermus profundus DSM
14977]
Length = 117
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK F ++KG + S+ L + RVG V+KK G A +R R
Sbjct: 1 MTSLKTDAAFRRLRKGRTGRARTLSVRWLPTRRGEV--RVGIVVSKKVGNA----VVRNR 54
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++ +R + D +++A+ +A F EL + + ++ +
Sbjct: 55 VRRRLREILRRMHLPSADLMVVARPEAAEADFHELARDLMRALDKSGLLRHRP 107
>gi|71083174|ref|YP_265893.1| ribonuclease P protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062287|gb|AAZ21290.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 114
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKK-QGCAVERNR 59
S I L K F + K + + +L + N + F KK AV+RN+
Sbjct: 3 SKIVALSKNEDFKNLLKKKKISNKYITLFFGPLADKDNKKLNISFVAKKKLIRSAVKRNK 62
Query: 60 MRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ + + V + + Y++IAK L + + + + + + K
Sbjct: 63 IKRRLRNIMNEAIKKVSINFNYSYLVIAKITMLNNEYAIIKDTLFQDIEKIK 114
>gi|47459466|ref|YP_016328.1| ribonuclease p protein component [Mycoplasma mobile 163K]
gi|60390449|sp|Q6KH14|RNPA_MYCMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|47458796|gb|AAT28117.1| ribonuclease p protein component [Mycoplasma mobile 163K]
Length = 112
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ILKK +F + + P L +++ ++G ++ KK AV+RN
Sbjct: 1 MKRKYILKKNWEFQKIIDSKKQFIFPTIILYYKKSDS----FQIGISIPKKFAIAVKRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R++K + L ++ +LI +++ L + F + + + R
Sbjct: 57 LKRQIKSILDQIRPYNL--SYEMILIVRKNYLNLNFLQKQQEIKKIIER 103
>gi|282889814|ref|ZP_06298353.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500388|gb|EFB42668.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 86
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G TV+KK G A +RNR +R ++EA R C +L D + + + +++
Sbjct: 13 RLGITVSKKYGKAHDRNRFKRTVREAFRTC-HHLLPPHLDLNVKPRGFHKNLKTQDVQKE 71
Query: 102 FVERVR 107
+ ++
Sbjct: 72 MLLLLQ 77
>gi|30248406|ref|NP_840476.1| ribonuclease P protein [Nitrosomonas europaea ATCC 19718]
gi|48474384|sp|Q82X99|RNPA_NITEU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30138292|emb|CAD84300.1| Bacterial ribonuclease P protein [Nitrosomonas europaea ATCC 19718]
Length = 119
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
+ C L+K +F V + SL + R+G V K+ AV RNR
Sbjct: 9 LPRQCKLRKADEFRAVLRN-RIVFESLSLRLYVKPIDVDYARIGLIVAKRVERKAVRRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R ++EA R + ++ G D V+ + + + V + R
Sbjct: 68 IKRLIREAFRRHRQMLM--GLDCVMQLRHPVELLDSTRIYQEAVMLFNKAAR 117
>gi|88860618|ref|ZP_01135255.1| Ribonuclease P protein component [Pseudoalteromonas tunicata D2]
gi|88817213|gb|EAR27031.1| Ribonuclease P protein component [Pseudoalteromonas tunicata D2]
Length = 135
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L N PR+G TV KK A +RNR++R +E+ RL + D VL+ K
Sbjct: 35 LLAKPNDVNKPRLGLTVAKKRVKQANQRNRIKRLARESFRLSQHKL--DNIDIVLMVKDG 92
Query: 90 ALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
L + + G
Sbjct: 93 CALQDNTLLRKQLDKLWLKINERCKPGAPKP 123
>gi|284799978|ref|ZP_05985358.2| ribonuclease P protein component [Neisseria subflava NJ9703]
gi|319639362|ref|ZP_07994113.1| ribonuclease P protein component [Neisseria mucosa C102]
gi|284796250|gb|EFC51597.1| ribonuclease P protein component [Neisseria subflava NJ9703]
gi|317399546|gb|EFV80216.1| ribonuclease P protein component [Neisseria mucosa C102]
Length = 113
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V + R+ + +N+ PR+G V+KK A +RN M+R +
Sbjct: 10 RLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHDRNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++ RL + HD+V+ ++ E N + +++ +
Sbjct: 70 RDWFRLNQHQL--PPHDFVVRVRQAFNRETAPEARNQLAQLMKKRR 113
>gi|85717141|ref|ZP_01048100.1| ribonuclease P protein [Nitrobacter sp. Nb-311A]
gi|85696032|gb|EAQ33931.1| ribonuclease P protein [Nitrobacter sp. Nb-311A]
Length = 87
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R+GFTVTK+ G A ERNR+RRRL+E V+ ++ DYV+I +R AL
Sbjct: 7 RDDGGPIRIGFTVTKRNGTATERNRIRRRLRELVKRMDAVSMRPHSDYVIIGRRAALNRR 66
Query: 95 FKELCNHFVERVRRNKRSY 113
F + + R R +
Sbjct: 67 FAVMLDDLRSAFHRLDRRH 85
>gi|254788527|ref|YP_003075956.1| ribonuclease P [Teredinibacter turnerae T7901]
gi|237687237|gb|ACR14501.1| ribonuclease P protein component [Teredinibacter turnerae T7901]
Length = 136
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P F + L + N+ R+G + KK AV+RNR++R ++E R +
Sbjct: 31 KASHPHFLI--LASPNAATHARLGLVIAKKNVRHAVDRNRLKRLIRETFR--GKQHQMPA 86
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
D +++A+R + + +E + R + + R
Sbjct: 87 IDAIVLARRGSDQLNNRETAKILDKLWERVAKKANNPNPQQR 128
>gi|33519497|ref|NP_878329.1| ribonuclease P [Candidatus Blochmannia floridanus]
gi|48474806|sp|Q7VQV1|RNPA_BLOFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33517160|emb|CAD83542.1| RNase P, protein component [Candidatus Blochmannia floridanus]
Length = 120
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
+S L K +F V + R S+ + + +N PR+G ++KK + ERNR
Sbjct: 6 LSKRVRLLKINEFFFVFQKPQRI-KVHSMTLFSRSNKLNFPRIGLAISKKYIKHSHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL-IAKRDALFIPFKELCNHFVERV 106
++R ++E R +L D++L + + L + L +
Sbjct: 65 IKRHVRETFRTHKHNLL--SLDFILTVHSKQILSLTNNNLIEELKKLW 110
>gi|193217060|ref|YP_002000302.1| ribonuclease P protein component [Mycoplasma arthritidis 158L3-1]
gi|193002383|gb|ACF07598.1| ribonuclease P protein component [Mycoplasma arthritidis 158L3-1]
Length = 112
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N +LKK +F V + + + + +VG ++ K+ AV RN
Sbjct: 1 MTNKHVLKKNWEFKAVLAARKQVVSKNLIIYYVP----SEIFQVGISIPKQFANAVMRNH 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R +++ +R + + ++IA++ L + FK R +
Sbjct: 57 YRNQIRAIIRELDKTNILFRT--IIIARKTFLSLDFKTKQQEIKNLYERIVK 106
>gi|71909812|ref|YP_287399.1| ribonuclease P protein [Dechloromonas aromatica RCB]
gi|71849433|gb|AAZ48929.1| ribonuclease P protein component [Dechloromonas aromatica RCB]
Length = 123
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Query: 6 ILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
L K +F+ V +G L SN R+G V KK AV+RN ++R
Sbjct: 10 RLTKTDEFSSVFGFRKAIRGKLLMLHYQPRPESNTEARLGLVVGKKLLKRAVDRNLVKRI 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++E RL D V+ + K++ + FV + + +R
Sbjct: 70 VREQFRL--RRAALPPVDLVVRLACKPAPLDRKQVADDFVALLDKLQRPRNKRDGQ 123
>gi|222823563|ref|YP_002575137.1| ribonuclease P protein component [Campylobacter lari RM2100]
gi|222538785|gb|ACM63886.1| ribonuclease P protein component [Campylobacter lari RM2100]
Length = 81
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+KK G AV RNR +R L+ A + +++G Y+L+AK IPF +L +
Sbjct: 16 VASKKVGKAVVRNRAKRLLRSAF-FQVKNQVENGK-YILVAKTSIGEIPFLKLEKNLKWG 73
Query: 106 VRR 108
+++
Sbjct: 74 LKK 76
>gi|326383907|ref|ZP_08205591.1| ribonuclease P [Gordonia neofelifaecis NRRL B-59395]
gi|326197366|gb|EGD54556.1| ribonuclease P [Gordonia neofelifaecis NRRL B-59395]
Length = 140
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 14/116 (12%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEV-------------LNNNNSNLLPRVGFTVTKK 50
+ ++ F + KG ++ V + +N P +G ++KK
Sbjct: 6 ARISRKSDFTRTLSKGVRVSARDLTVHVAPLGADWPDESALRPDVATNGGPWLGLIISKK 65
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
G AV R+R RRL+ A A L VL A + +L +
Sbjct: 66 VGNAVIRHRTARRLRHAFAEAATTGLPPETFVVLRAHPGIVDRTSTDLADVLRTAF 121
>gi|255660032|ref|ZP_05405441.1| ribonuclease P protein component [Mycoplasma genitalium G37]
Length = 121
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLK 65
L++R+ F + + + R F + N++ RV ++ K K AV+RN ++R+++
Sbjct: 9 LRERKVFTTILQSKTRFFGTF-INAYFIKNNHSTWRVAISIAKTKYKLAVQRNLIKRQIR 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ + + D ++I + + + FKE F++ ++R K
Sbjct: 68 SIFQQISNNLEP--WDILVIVNKGFIELTFKEKQKLFLQLLKRIKE 111
>gi|91762397|ref|ZP_01264362.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718199|gb|EAS84849.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 114
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKK-QGCAVERNR 59
S I L K F + K + + +L + N + F KK AV+RN+
Sbjct: 3 SKIVALSKNEDFKNLLKKKKISNKYITLFFGPLVDKDNRKLNISFVAKKKLIRGAVKRNK 62
Query: 60 MRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ + + + + + Y++IAK L + + + + + + K
Sbjct: 63 VKRRLRNIINEAVKKLSINFNYSYLVIAKITMLNNEYAIIKDTLFQDIEKIK 114
>gi|311742161|ref|ZP_07715971.1| ribonuclease P protein component [Aeromicrobium marinum DSM 15272]
gi|311314654|gb|EFQ84561.1| ribonuclease P protein component [Aeromicrobium marinum DSM 15272]
Length = 121
Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 6/118 (5%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++ +F ++G P V + VGF V+K G AV RNR++RRL
Sbjct: 7 RMRDGEEFRRTMRRGTKAVTPTVVAHVAPGTDGVRS--VGFVVSKAVGPAVVRNRVKRRL 64
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KELCNHFVERVRRNKRSYYSGKNFS 120
+ + E L G V+ A A +L +RR+ + S
Sbjct: 65 RHLMAQRIER-LPAGTRVVVRALPPAATADSLADDLDASLDRGLRRSADRTATSVGRS 121
>gi|220936475|ref|YP_002515374.1| ribonuclease P protein component [Thioalkalivibrio sp. HL-EbGR7]
gi|254808096|sp|B8GRD3|RNPA_THISH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219997785|gb|ACL74387.1| ribonuclease P protein component [Thioalkalivibrio sp. HL-EbGR7]
Length = 120
Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L + Q+ V F+L V +N R+G ++KK AV+R R
Sbjct: 8 PRSVRLTRPEQYKQVFGDARKLSDAGFTLLV--RDNDGDSARLGLAISKKCARRAVDRQR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R ++E R + + D V++ + + R
Sbjct: 66 IKRLVRETFRQHRQHLAP--VDVVVMCRPAVTGWDNARIRASLERFWARLSTP 116
>gi|12045324|ref|NP_073135.1| ribonuclease P protein component [Mycoplasma genitalium G37]
gi|1350815|sp|P47703|RNPA_MYCGE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3845060|gb|AAC72485.1| ribonuclease P protein component [Mycoplasma genitalium G37]
gi|166079072|gb|ABY79690.1| ribonuclease P protein component [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 128
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLK 65
L++R+ F + + + R F + N++ RV ++ K K AV+RN ++R+++
Sbjct: 16 LRERKVFTTILQSKTRFFGTF-INAYFIKNNHSTWRVAISIAKTKYKLAVQRNLIKRQIR 74
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ + + D ++I + + + FKE F++ ++R K
Sbjct: 75 SIFQQISNNLEP--WDILVIVNKGFIELTFKEKQKLFLQLLKRIKE 118
>gi|282898268|ref|ZP_06306259.1| ribonuclease P protein [Raphidiopsis brookii D9]
gi|281196799|gb|EFA71704.1| ribonuclease P protein [Raphidiopsis brookii D9]
Length = 140
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSN-------------------LL 40
+ LK R F V + G F+L L +
Sbjct: 3 LPKAYRLKSRGDFQAVFREGVRCHSSHFTLRALKTLSPTQVALHPSSITTPANTCENLPN 62
Query: 41 PRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KE 97
++G +++ K AV RNR++R++ + + K G V+I K ++
Sbjct: 63 TKIGISISTKVSKRAVVRNRIKRQITGVLYQLLPKLSK-GWRLVVIVKPKTGEWECISQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLRELEQLLVKAE 134
>gi|311112574|ref|YP_003983796.1| ribonuclease P protein component [Rothia dentocariosa ATCC 17931]
gi|310944068|gb|ADP40362.1| ribonuclease P protein component [Rothia dentocariosa ATCC 17931]
Length = 88
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+K G AV RNR++RRL+E G + A + ++EL + +
Sbjct: 2 SKAVGNAVTRNRVKRRLRELAAATVSAY-PQGLYIAVRALPASAGANWEELRADYRGALE 60
Query: 108 RNKRSYYSGKNF 119
+ +
Sbjct: 61 SSLKKLDRQDQR 72
>gi|282901450|ref|ZP_06309375.1| ribonuclease P protein [Cylindrospermopsis raciborskii CS-505]
gi|281193729|gb|EFA68701.1| ribonuclease P protein [Cylindrospermopsis raciborskii CS-505]
Length = 138
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 22/131 (16%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSN-----------------LLPR 42
+ LK R F V + G F+L L + +
Sbjct: 3 LPKAYRLKSRGDFQAVFREGVRCHSSHFTLRALKPLSPTHLHSSSINIPANTCENLPNTK 62
Query: 43 VGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KELC 99
+G +++ K AV RNR++R++ + + K G V+I K ++
Sbjct: 63 IGISISTKVSKRAVVRNRIKRQITGVLYQLLPKLSK-GWRLVVIVKPKTGEWECISQQFL 121
Query: 100 NHFVERVRRNK 110
+ + + +
Sbjct: 122 RELEQLLVKAE 132
>gi|300115606|ref|YP_003762181.1| ribonuclease P protein component [Nitrosococcus watsonii C-113]
gi|299541543|gb|ADJ29860.1| ribonuclease P protein component [Nitrosococcus watsonii C-113]
Length = 119
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
+ + L F G F+ VL +NS PR+G + +K AV+RNR
Sbjct: 7 ARLMRLADPDDFKQAFTAGGRVSNKAFT--VLYRSNSLEYPRLGMAIPRKHFSRAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R ++E+ R + G D V+++K EL + + R +
Sbjct: 65 IKRLVRESFR--QRQRVLGGRDLVVLSKPGINRRSNSELLSCLERQWMRLVK 114
>gi|227549435|ref|ZP_03979484.1| ribonuclease P [Corynebacterium lipophiloflavum DSM 44291]
gi|227078512|gb|EEI16475.1| ribonuclease P [Corynebacterium lipophiloflavum DSM 44291]
Length = 121
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 4/121 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNL--LPRVGFTVTKKQGCAVER 57
+ L QF R G + V L PR G V+K G AV R
Sbjct: 2 LPKANKLASPEQFRRTMAARTRAGSRTVVVHVAARTELALSGGPRFGLIVSKAVGNAVTR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ + R+L+ V + L D V+ A A EL + + + + S +
Sbjct: 62 HSVSRKLRHVV-VSGVDTLARDTDVVVRALPPAATATSAELARDYEQALATALKKLRSKE 120
Query: 118 N 118
+
Sbjct: 121 S 121
>gi|121998019|ref|YP_001002806.1| ribonuclease P protein component [Halorhodospira halophila SL1]
gi|254808068|sp|A1WWE2|RNPA_HALHL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|121589424|gb|ABM62004.1| ribonuclease P protein component [Halorhodospira halophila SL1]
Length = 122
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L +RR+F V + + V N PR+G V K+ A++R+R+
Sbjct: 8 PRGARLLRRREFEGVLRAPEWRTANRYFRVSARQNQCGRPRLGLAVPKRVLRLAIQRHRV 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R+ G+ HD+V+ + L + E +
Sbjct: 68 KRIIRESFRVRQGGL--PDHDFVVGVRGAVAEADNATLFSALEELWAHAR 115
>gi|77166534|ref|YP_345059.1| ribonuclease P protein [Nitrosococcus oceani ATCC 19707]
gi|254436115|ref|ZP_05049622.1| ribonuclease P protein component [Nitrosococcus oceani AFC27]
gi|123593185|sp|Q3J6L7|RNPA_NITOC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76884848|gb|ABA59529.1| ribonuclease P protein component [Nitrosococcus oceani ATCC 19707]
gi|207089226|gb|EDZ66498.1| ribonuclease P protein component [Nitrosococcus oceani AFC27]
Length = 119
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F + GE F+ VL ++NS PR+G + +K AV+RNR++R ++E+ R
Sbjct: 17 DFKQIFAAGERVSSKAFT--VLYHSNSLEYPRLGMAIPRKHFSRAVDRNRIKRLVRESFR 74
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ G D V+++K P +L +
Sbjct: 75 --QRQQVLGGRDLVVLSKPGINRHPNSDLLRCLERQW 109
>gi|145353523|ref|XP_001421060.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581296|gb|ABO99353.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 164
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKK-QGCAVERNRMR 61
LK F VK+ G G + ++N N R+G V KK AV+RN ++
Sbjct: 25 RLKTNADFDRVKREGRTYNGAHLRIRAVDNANHEPATCTRIGIVVPKKQVKRAVDRNLIK 84
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
RR++ A R + D+++ AL F+ + +
Sbjct: 85 RRIRHAFRTNKDAW-PARVDFIVFVNASALEGGFEGVRDDM 124
>gi|88813022|ref|ZP_01128264.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
gi|88789655|gb|EAR20780.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
Length = 81
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L + ++A V G +F++ V+ N++ R+G TV+KK AV RNR
Sbjct: 7 PRSVRLTRPAEYARVFAGARRVADCYFTVLVIRNDHDR--ARLGVTVSKKTAPLAVVRNR 64
Query: 60 MRRRLKEAVRLCAEG 74
++RR++EA RL G
Sbjct: 65 IKRRIREAFRLHQVG 79
>gi|297539960|ref|YP_003675729.1| ribonuclease P protein component [Methylotenera sp. 301]
gi|297259307|gb|ADI31152.1| ribonuclease P protein component [Methylotenera sp. 301]
Length = 132
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 9 KRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKE 66
K F+ V R + + N R+G V KK AV RN MRR L+E
Sbjct: 15 KTDDFSSVFNFRKRFSLKYLVMHYQPNTLQR--ARLGLVVGKKTAKLAVSRNYMRRVLRE 72
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RL + D ++ ++ + F ++ F + + +
Sbjct: 73 FFRLNQHDIC--HVDLIIRVQKKFDKVDFIQIKQEFDSLIYKLNQR 116
>gi|218296524|ref|ZP_03497252.1| ribonuclease P protein component [Thermus aquaticus Y51MC23]
gi|218243066|gb|EED09598.1| ribonuclease P protein component [Thermus aquaticus Y51MC23]
Length = 79
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG V+KK G AV RN+++ +R + +L+A +A F EL
Sbjct: 9 PEARVGIVVSKKVGKAVVRNKVK----RRLREILRRLHLPKAHILLVASPEAREAGFAEL 64
Query: 99 CNHFVERVRRN 109
V +R++
Sbjct: 65 FQDVVRALRKS 75
>gi|13358168|ref|NP_078442.1| ribonuclease p - protein component [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|167971173|ref|ZP_02553450.1| ribonuclease P protein component [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|168282007|ref|ZP_02689674.1| ribonuclease P protein component [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|168308154|ref|ZP_02690829.1| ribonuclease P protein component [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|170761951|ref|YP_001752688.1| ribonuclease P protein component [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|9789794|sp|Q9PPN6|RNPA_UREPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043751|sp|B1AJP4|RNPA_UREP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|11357022|pir||G82871 ribonuclease p protein component UU603 [imported] - Ureaplasma
urealyticum
gi|6899614|gb|AAF31017.1|AE002158_15 ribonuclease p - protein component [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827528|gb|ACA32790.1| ribonuclease P protein component [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171902587|gb|EDT48876.1| ribonuclease P protein component [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|182676103|gb|EDT88008.1| ribonuclease P protein component [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|186701163|gb|EDU19445.1| ribonuclease P protein component [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 113
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M+N LKK +KK + + N N+ R+ +++KK A +RN
Sbjct: 1 MANFISLKKNEDILDTIKKQQKIHSNQIVVYFRKTNLKNV--RLAISISKKKFKLATQRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKR 111
R+RR +K A + +D V++ K + F L + + KR
Sbjct: 59 RIRRLIK--AWFIAADIPIKSYDIVVLVKPSFIDGSFVLNCNNLKIILQRIINKEKR 113
>gi|330835989|ref|YP_004410630.1| Ribonuclease P protein component [Spirochaeta coccoides DSM
17374]
gi|329747892|gb|AEC01248.1| Ribonuclease P protein component [Spirochaeta coccoides DSM
17374]
Length = 116
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ I+KKR + + K G+ P L V N N R+ +K G +V+RNR
Sbjct: 5 LTKKEIVKKRPEIDRIFKAGKKFSCPGIRLLVCPNQLEN--NRIVVIPVRKYGNSVQRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+RR++KE R ++ G+D+ I
Sbjct: 63 IRRQVKEIWRQEKPQ-MQSGYDFAFIVYPGKTTA 95
>gi|326329127|ref|ZP_08195455.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
gi|325953014|gb|EGD45026.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
Length = 117
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPR-----VGFTVTKKQGCAVERNRMRRRLKEAVR 69
V++G+ + +L + + R VGF V+K G AV RNR++RRL+ R
Sbjct: 17 AVRRGKRAGSKSLVVHLLVPDTGSDATRESDPQVGFVVSKAVGPAVVRNRVKRRLRHQAR 76
Query: 70 LCAEGV 75
G+
Sbjct: 77 ESLSGL 82
>gi|241759423|ref|ZP_04757527.1| ribonuclease P protein component [Neisseria flavescens SK114]
gi|241320205|gb|EER56538.1| ribonuclease P protein component [Neisseria flavescens SK114]
Length = 113
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V + R+ + +N+ PR+G V+KK A +RN M+R +
Sbjct: 10 RLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHDRNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++ RL + HD+V+ ++ E + + +++ +
Sbjct: 70 RDWFRLNQHQLSP--HDFVVRVRQAFNRETAPEARDQLAQLMKKRR 113
>gi|298490099|ref|YP_003720276.1| ribonuclease P protein component ['Nostoc azollae' 0708]
gi|298232017|gb|ADI63153.1| ribonuclease P protein component ['Nostoc azollae' 0708]
Length = 140
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN-----NNNSNLL-------------- 40
+ LK R F V + G F+L L + +
Sbjct: 3 LPKAYRLKSLRDFQAVFREGIRCHSSHFTLRALKPLGVKRPSMDAADVTTKPTSCENLAT 62
Query: 41 PRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KE 97
++G +++ K AV RNR++R++ + + ++ G V+I K A ++
Sbjct: 63 TKIGISISTKVSKRAVVRNRIKRQIAKDLYQLIPNLV-PGWRLVIIVKPKAAESECVSQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAKAE 134
>gi|307611887|emb|CBX01603.1| hypothetical protein LPW_32901 [Legionella pneumophila 130b]
Length = 96
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 31 VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
L N R+G ++KK A +RNR++R L+E+ R D +++A+
Sbjct: 15 FLFRENKLGYARLGLALSKKMIAKAHDRNRIKRLLRESFRHTN----LPAVDIIILARPG 70
Query: 90 ALFIPFKELCNHFVERVRR 108
+ + +
Sbjct: 71 LAKKTNLGINTKLNKTWEK 89
>gi|325267551|ref|ZP_08134203.1| ribonuclease P protein component [Kingella denitrificans ATCC
33394]
gi|324980901|gb|EGC16561.1| ribonuclease P protein component [Kingella denitrificans ATCC
33394]
Length = 119
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
C L K +F+ V ++ F + NN R+G V+KK A RN M+
Sbjct: 7 KACRLLKTEEFSSVFALRKQRSREFLQVLRLENNVQGFARLGLVVSKKAAKRANRRNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
R ++E R + HD+V+ ++
Sbjct: 67 RVIREWFRRH--QCVLPPHDFVVRVRKA 92
>gi|300869649|ref|YP_003784520.1| ribonuclease P protein component [Brachyspira pilosicoli 95/1000]
gi|300687348|gb|ADK30019.1| ribonuclease P protein component [Brachyspira pilosicoli 95/1000]
Length = 138
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
FF++ L NN S R T+ K + AV+RNR +R ++E R + + G+
Sbjct: 54 KYSNYFFTILALQNNRS--YSRFVVTIKKNKTNAVKRNRAKRIVREIYR-TEKNNIPVGY 110
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRR 108
DY +I R + F + ++ R
Sbjct: 111 DYFIIINRY-ISRSFLDYKKELMKLFYR 137
>gi|318058972|ref|ZP_07977695.1| putative RNase P component [Streptomyces sp. SA3_actG]
gi|318077326|ref|ZP_07984658.1| putative RNase P component [Streptomyces sp. SA3_actF]
Length = 74
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R GF V+K G AV R ++R+L+ +R +L G V+ A A +L
Sbjct: 2 RAGFVVSKAVGKAVVRTSVKRKLRHLIRDRL-SLLPPGSLVVVRALPGAGDADHAQLARD 60
Query: 102 FVERVRR 108
++R
Sbjct: 61 LDAALKR 67
>gi|295131894|ref|YP_003582570.1| ribonuclease P protein component [Zunongwangia profunda SM-A87]
gi|294979909|gb|ADF50374.1| ribonuclease P protein component [Zunongwangia profunda SM-A87]
Length = 135
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 38 NLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL---KHGHDYVLI--AKRDAL 91
N + GF+V KK AV+RNR++R ++E+ R V+ K + + I ++ D
Sbjct: 51 NPYFKTGFSVPKKFIKTAVQRNRIKRLMRESFRKNKYIVMTGAKQQYALMFIYLSREDIS 110
Query: 92 FIPFKELCNHFVERVRRNKR 111
I ++L + +ER+++ ++
Sbjct: 111 QIKMEQLMVNLLERLKQKEK 130
>gi|296131546|ref|YP_003638796.1| ribonuclease P protein component [Cellulomonas flavigena DSM 20109]
gi|296023361|gb|ADG76597.1| ribonuclease P protein component [Cellulomonas flavigena DSM 20109]
Length = 112
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+++ F + R G + L P VG V++ G AV RNR++RRL+
Sbjct: 1 MRRSADFQQTVRRGARGGRDTLVVHLTTTTDPGPPAVGLVVSRGVGNAVTRNRVKRRLRA 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
V +G L G V+ A+ A EL R
Sbjct: 61 LVAARLDG-LPEGALVVVRAQPAAASASSVELGRDLDGAFATAGRR 105
>gi|300859526|ref|YP_003784509.1| ribonuclease P protein component [Corynebacterium
pseudotuberculosis FRC41]
gi|300686980|gb|ADK29902.1| ribonuclease P protein component [Corynebacterium
pseudotuberculosis FRC41]
gi|302207209|gb|ADL11551.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis C231]
gi|302331770|gb|ADL21964.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis 1002]
gi|308277462|gb|ADO27361.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis I19]
Length = 118
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 12 QFAL-VKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMRRRLK 65
+F ++KG+ + + + + + PR G V+K G AV R+ + R+L+
Sbjct: 13 EFRRTIRKGKRAGRSTVVIHLRTHATAGEIAAVGGPRFGLVVSKAVGNAVTRHAVSRKLR 72
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + + + H V+ A A KEL + V +
Sbjct: 73 HVLMGIKDQIPQDAH-IVVRALPPAATATSKELESDVRSGVEK 114
>gi|312142026|ref|YP_004009362.1| ribonuclease p protein component [Rhodococcus equi 103S]
gi|325677523|ref|ZP_08157187.1| ribonuclease P protein component [Rhodococcus equi ATCC 33707]
gi|311891365|emb|CBH50686.1| ribonuclease P protein component [Rhodococcus equi 103S]
gi|325551770|gb|EGD21468.1| ribonuclease P protein component [Rhodococcus equi ATCC 33707]
Length = 102
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 22 RKGPFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
+ ++ PR G V+K G AV R+R+ RR + L
Sbjct: 1 MGRRDLVVHARERGATDTLVSIDGPRFGLVVSKAVGPAVIRHRVARRFRHICA-GLVDTL 59
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
D V+ A + +EL +RR
Sbjct: 60 PVDTDVVIRALPGSATATSRELDKQLRSVLRRM 92
>gi|227496607|ref|ZP_03926885.1| ribonuclease P [Actinomyces urogenitalis DSM 15434]
gi|226833887|gb|EEH66270.1| ribonuclease P [Actinomyces urogenitalis DSM 15434]
Length = 117
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPR-VGFTVTKK-QGCAVERNRMRRRLKEAVRLCA 72
V+ G + + P VG V KK A RNR++RR++ +R
Sbjct: 10 AVRSGARAGSRRLVIHYSAGEAGDTTPALVGVVVPKKQVAKATHRNRIKRRVRALMRDRV 69
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
G L+ G VL A +EL + R + +
Sbjct: 70 AG-LEPGAKIVLRGLAGADGATSQELAADLDRLLERGRSGKPRRQGR 115
>gi|317509425|ref|ZP_07967043.1| ribonuclease P [Segniliparus rugosus ATCC BAA-974]
gi|316252254|gb|EFV11706.1| ribonuclease P [Segniliparus rugosus ATCC BAA-974]
Length = 142
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 11/122 (9%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRV---------GFTVTKK 50
+ ++ R F+ V+ G + +L + + RV G V K+
Sbjct: 2 LPPQNRMRSRLDFSETVRCGRRTGRRDMVVHLLTRDFGDAQGRVVAAPCASKAGLIVGKQ 61
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G +V R ++ R+L+ A+R + V+ A + E +R+
Sbjct: 62 VGGSVTRKKVSRKLRSALRSVLPELPPSSL-LVVRALPGSAQTQVAEFEGQLRSALRKLA 120
Query: 111 RS 112
+
Sbjct: 121 PT 122
>gi|26554488|ref|NP_758422.1| ribonuclease P protein component [Mycoplasma penetrans HF-2]
gi|29427766|sp|Q8EU90|RNPA_MYCPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|26454498|dbj|BAC44826.1| ribonuclease P protein component [Mycoplasma penetrans HF-2]
Length = 111
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 6 ILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
+L+ ++ F+ + K + FF + NN L R KK AVERN+++R+
Sbjct: 5 VLRNKKDFSNLFKNKSTYYSSFFIIYAYKNNLGWL--RYAIAANKKNFKTAVERNKIKRQ 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++ VR + D ++I K + F N + + +
Sbjct: 63 IRSIVRGLENKNIP--VDILIIPKNNFFKTDFLNKKNDLFNLIVKIR 107
>gi|294789685|ref|ZP_06754918.1| ribonuclease P protein component [Simonsiella muelleri ATCC
29453]
gi|294482397|gb|EFG30091.1| ribonuclease P protein component [Simonsiella muelleri ATCC
29453]
Length = 119
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K +F+ V ++ F + + N+ PR+G V+KK A +RN M+R +
Sbjct: 13 RLLKTEEFSSVFALRKQRSRVFIQVMQSAGNTLAYPRLGLVVSKKVAKRANKRNYMKRVI 72
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK 87
+E R + D+V+ +
Sbjct: 73 REWFRCHKHDL--PARDFVVRVR 93
>gi|319952960|ref|YP_004164227.1| ribonuclease p protein component [Cellulophaga algicola DSM
14237]
gi|319421620|gb|ADV48729.1| ribonuclease P protein component [Cellulophaga algicola DSM
14237]
Length = 139
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 19 GELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
G+ P + V + N+ + G TV+K+ AV+RNR++R L+EA RL V+
Sbjct: 28 GKSVANFPLRVIYVKTDFKDNVPIKAGVTVSKRNFKSAVKRNRIKRILREAYRLNKSIVI 87
Query: 77 KHGHD 81
+ D
Sbjct: 88 NNSTD 92
>gi|302336555|ref|YP_003801761.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
gi|301633740|gb|ADK79167.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
Length = 115
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
++ N+ R T+ +K G AV+RNR +R +EA RL ++ G+D VL+ R
Sbjct: 24 LMYRTNNTERNRFTVTLVRKYGNAVQRNRAKRVAREAYRLIKPE-IRQGYDMVLLLYRSE 82
Query: 91 LFIPFKELCNHFVERVRRNK 110
+ + + + + +
Sbjct: 83 DTLSNRS--RQLSDLLHKAQ 100
>gi|257461377|ref|ZP_05626473.1| ribonuclease P protein component [Campylobacter gracilis RM3268]
gi|257441100|gb|EEV16247.1| ribonuclease P protein component [Campylobacter gracilis RM3268]
Length = 79
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+KK G +V RN +RRL+ A + + G ++LIAK+ + + F+++ +
Sbjct: 14 VASKKIGNSVTRNYAKRRLRAAF-YNQKDAIVSGI-FILIAKKRIIDMSFEDIERNLKWA 71
Query: 106 VRR 108
++
Sbjct: 72 FKK 74
>gi|296112229|ref|YP_003626167.1| ribonuclease P protein component [Moraxella catarrhalis RH4]
gi|295921809|gb|ADG62160.1| ribonuclease P protein component [Moraxella catarrhalis RH4]
gi|326561741|gb|EGE12076.1| ribonuclease P protein component [Moraxella catarrhalis 7169]
gi|326569038|gb|EGE19107.1| ribonuclease P protein component [Moraxella catarrhalis BC1]
gi|326571727|gb|EGE21740.1| ribonuclease P protein component [Moraxella catarrhalis BC8]
gi|326571818|gb|EGE21824.1| ribonuclease P protein component [Moraxella catarrhalis BC7]
gi|326574359|gb|EGE24302.1| ribonuclease P protein component [Moraxella catarrhalis CO72]
Length = 137
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V ++K L L R+G +TKK AV+RN+++R +E R
Sbjct: 32 ADFKAVFDSPVKKVHTLHLLAFIGQGQGLSARLGLAITKKKLKKAVDRNQLKRLCRENFR 91
Query: 70 LCAEGVLKHGHDYVLIAKRD 89
+ D V+I K
Sbjct: 92 HRQASWVA--IDVVVIVKAG 109
>gi|119718916|ref|YP_925881.1| ribonuclease P protein component [Nocardioides sp. JS614]
gi|166226730|sp|A1SQV9|RNPA_NOCSJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119539577|gb|ABL84194.1| ribonuclease P protein component [Nocardioides sp. JS614]
Length = 117
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
++ RVGF V++ G AV RN+++RRL+ R L V+ A A
Sbjct: 40 ASQPARVGFVVSRAVGNAVIRNQVKRRLRHLAREHVSS-LPGSAVLVVRALPPAANASAA 98
Query: 97 ELCNHFVERVRR 108
EL + R
Sbjct: 99 ELARDLERCLLR 110
>gi|241659449|emb|CAZ65701.1| Ribonuclease P protein component [Mycoplasma conjunctivae]
Length = 114
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + I+ K QF + + L N +G ++ KK +V+RN
Sbjct: 1 MYKLQIVSKNWQFQEIIDSKQQIVTKNLILYYKKFTNFE----IGISIPKKFANSVKRNF 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKRS 112
+R++K +R + +LI ++ L + F +++ F E ++ K++
Sbjct: 57 YKRQIKNVLRKLIKNYDLPNFRIILITRKSFLDLKFVQKEEKIQKIFEELLKNVKQA 113
>gi|196229391|ref|ZP_03128256.1| ribonuclease P protein component [Chthoniobacter flavus Ellin428]
gi|196226623|gb|EDY21128.1| ribonuclease P protein component [Chthoniobacter flavus Ellin428]
Length = 120
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L + +F +++ G+ G FF L VL N + RVGF +++ G AV RNR+
Sbjct: 7 PKSARLSRASEFQRMRREGQSFHGKFFVLSVLKN-LPSPEVRVGFITSRRVGGAVARNRV 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRRL+E VR ++ G L+A++ A F+ L + +R+
Sbjct: 66 RRRLREIVRATRPEIM-AGTWLTLVARQAAAGATFQNLAAEWRMLAQRS 113
>gi|289209761|ref|YP_003461827.1| ribonuclease P protein component [Thioalkalivibrio sp. K90mix]
gi|288945392|gb|ADC73091.1| ribonuclease P protein component [Thioalkalivibrio sp. K90mix]
Length = 116
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
+ V + + PR+G + K+ A +RNR++R ++EA R
Sbjct: 18 ADYRHVFADARPIRGRYLTLLYRAREGGGEPRLGLAIAKRHVRNATDRNRVKRIVREAFR 77
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
D +++A+ A + L + + R +
Sbjct: 78 --QRRAALPPVDLIVLARAGAGTCDRRALRSEMETLLDRLQ 116
>gi|311748431|ref|ZP_07722216.1| ribonuclease P [Algoriphagus sp. PR1]
gi|126576945|gb|EAZ81193.1| ribonuclease P [Algoriphagus sp. PR1]
Length = 130
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC-------AEGVL 76
PF + + + P+V F+V+KK AV+RN ++RR+KE+ RL L
Sbjct: 31 PFKVQFFVKKHGEHGTPKVLFSVSKKKIKKAVDRNFVKRRMKESYRLNKSLLSGLENKEL 90
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
G YV + F+++ + + + ++
Sbjct: 91 LLGLIYV-----GTKKMEFQQIQEKVILTLHKLVKT 121
>gi|254237757|ref|ZP_04931080.1| ribonuclease P protein component [Pseudomonas aeruginosa C3719]
gi|126169688|gb|EAZ55199.1| ribonuclease P protein component [Pseudomonas aeruginosa C3719]
Length = 73
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEA 67
RQF+ V K P + +L N PR+G + KK AV+RNR++R ++E+
Sbjct: 16 RQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLIRES 73
>gi|284928890|ref|YP_003421412.1| ribonuclease P protein component [cyanobacterium UCYN-A]
gi|284809349|gb|ADB95054.1| ribonuclease P protein component [cyanobacterium UCYN-A]
Length = 121
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQ-GCAV 55
+ L+ + F V K GE + F + L N N+ L + G ++++K A+
Sbjct: 3 LPKNNRLRHYKAFKSVYKRGECYQSSQFIMHSLFDTNKNHQILPTQFGISISQKVSKKAI 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN ++R++K +R ++ G+ V++ K+ + E +
Sbjct: 63 VRNYLKRQVKSVIRTFLPKIV-SGYQVVIVVKKQPQVCQYNIFLREIKELL 112
>gi|326562318|gb|EGE12644.1| ribonuclease P protein component [Moraxella catarrhalis 103P14B1]
gi|326575522|gb|EGE25447.1| ribonuclease P protein component [Moraxella catarrhalis 101P30B1]
Length = 137
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F V ++K L L R+G +TKK AV+RNR++R +E R
Sbjct: 32 ADFKAVFDSPVKKVHTLHLLAFIGQGQGLSARLGLAITKKKLKKAVDRNRLKRLCRENFR 91
>gi|255066613|ref|ZP_05318468.1| ribonuclease P protein component [Neisseria sicca ATCC 29256]
gi|255049197|gb|EET44661.1| ribonuclease P protein component [Neisseria sicca ATCC 29256]
Length = 112
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V + R+ + +N PR+G V+KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFKNRRSRDLLQVSQSADNGLNHPRLGLVVSKKTAKRAHERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++ RL + HD+V+ + E N + +R+
Sbjct: 70 RDWFRLNKNSL--PPHDFVVRVRLAFNRQNAAEARNQLAQLMRK 111
>gi|312200979|ref|YP_004021040.1| ribonuclease P protein component [Frankia sp. EuI1c]
gi|311232315|gb|ADP85170.1| ribonuclease P protein component [Frankia sp. EuI1c]
Length = 131
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + R + A V +G R + + + R GF V++K G AV RN++
Sbjct: 2 LPARSRVASRAEHAQVGRGGRRFSCHPLVVHALRTDDSGPARAGFVVSRKVGAAVTRNQV 61
Query: 61 RRRLKEAVR 69
RRRL+E R
Sbjct: 62 RRRLREQTR 70
>gi|319760163|ref|YP_004124101.1| ribonuclease P protein component [Candidatus Blochmannia vafer str.
BVAF]
gi|318038877|gb|ADV33427.1| ribonuclease P protein component [Candidatus Blochmannia vafer str.
BVAF]
Length = 115
Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
+S L ++F V K + L + + N PR+G ++KK A +RN
Sbjct: 6 LSKQTKLLNSKEFFSVFKAKKIIKSNGIL-LFSRPNQLGFPRIGLAISKKYINRAHDRNT 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL-IAKRDALFIPFKELCNHFVERVRRNK 110
++R +E R+ +L D+VL I + L++ L F + ++++
Sbjct: 65 IKRHARETFRILQHNLL--NLDFVLTIYSKKILYLKHNNLNEEFKKLWKQHE 114
>gi|300775420|ref|ZP_07085282.1| possible ribonuclease P [Chryseobacterium gleum ATCC 35910]
gi|300506160|gb|EFK37296.1| possible ribonuclease P [Chryseobacterium gleum ATCC 35910]
Length = 123
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 7 LKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKK-QGCAVERNRMRR 62
LKK + L +KG+ R + +L + S +P + G +V+K+ AV RNR++R
Sbjct: 12 LKKNTEISLLFEKGKWRTSGNLRIIILKDKPSIPIPTGKFGVSVSKRYFKRAVHRNRIKR 71
Query: 63 RLKEAVRLCAE 73
L+E RL E
Sbjct: 72 LLRECYRLNKE 82
>gi|260579559|ref|ZP_05847430.1| ribonuclease P protein component [Corynebacterium jeikeium ATCC
43734]
gi|258602330|gb|EEW15636.1| ribonuclease P protein component [Corynebacterium jeikeium ATCC
43734]
Length = 73
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFIPFKELC 99
+G V+K G AV R+ R+L+ A R E G V+ A + F+EL
Sbjct: 1 MGLVVSKAVGNAVTRHNTSRKLRHAFRAVMEEDSLDFPVGTTVVIRALPKSATASFEELV 60
Query: 100 NHFVERVRRNKRS 112
+RR
Sbjct: 61 GDVRSCIRRALPR 73
>gi|171920802|ref|ZP_02931986.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185178876|ref|ZP_02964649.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024418|ref|ZP_02997077.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518433|ref|ZP_03003924.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|188524210|ref|ZP_03004270.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867473|ref|ZP_03079477.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273302|ref|ZP_03205838.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554287|ref|YP_002285058.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550666|ref|ZP_03771615.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
gi|225551240|ref|ZP_03772186.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|226741398|sp|B5ZCB8|RNPA_UREU1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171903564|gb|EDT49853.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209514|gb|EDU06557.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188018703|gb|EDU56743.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188998267|gb|EDU67364.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|195659778|gb|EDX53158.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660949|gb|EDX54202.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249822|gb|EDY74602.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541788|gb|ACI60017.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379055|gb|EEH01420.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|225379820|gb|EEH02182.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
Length = 118
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M+N LK+ ++KK + + N R+ +++KK A +RN
Sbjct: 1 MANFISLKRNEDILNIIKKQQKIHSNHIVVYFCETNLK--KVRLAISISKKKFKLATQRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKRSY 113
R+RR +K A VL +D V++ K + F + + ++K++
Sbjct: 59 RIRRLIK--AWFIAANVLVESYDIVVLVKPSFIDGSFVLNCDNIKKILQTIISKHKQNK 115
>gi|55980414|ref|YP_143711.1| ribonuclease P protein component [Thermus thermophilus HB8]
gi|55771827|dbj|BAD70268.1| ribonuclease P protein component [Thermus thermophilus HB8]
Length = 77
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG V+KK G AV RN+++ +R + +++A +A F EL
Sbjct: 10 RVGIVVSKKVGKAVVRNKVK----RRLREILRRLHLPQAHLLVVASPEAREADFAELFRD 65
Query: 102 FVERVRRN 109
V +R++
Sbjct: 66 VVRALRKS 73
>gi|15828469|ref|NP_302732.1| ribonuclease P [Mycobacterium leprae TN]
gi|221230946|ref|YP_002504362.1| ribonuclease P [Mycobacterium leprae Br4923]
gi|1173101|sp|P46610|RNPA_MYCLE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808073|sp|B8ZTN6|RNPA_MYCLB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|886323|gb|AAB53139.1| ribonuclease P protein subunit [Mycobacterium leprae]
gi|13093899|emb|CAC32244.1| ribonuclease P protein component [Mycobacterium leprae]
gi|219934053|emb|CAR72812.1| ribonuclease P protein component [Mycobacterium leprae Br4923]
Length = 120
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVER 57
+S +++ +F VK G + V N + P VG + K G AVER
Sbjct: 2 LSACNRMRRSSEFDATVKFGLRAVQSDVIIHVWRGCNRDETKAPHVGLIIAKTVGSAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLI-AKRDALFIPFKELCNHFVERVR 107
+R+ RRL+ R + G D V+I A + + L +R
Sbjct: 62 HRVARRLRHVARTMLGELG--GADQVVIRALPSSRNVSSAWLAQQLRNGLR 110
>gi|88854498|ref|ZP_01129165.1| hypothetical protein A20C1_09779 [marine actinobacterium PHSC20C1]
gi|88816306|gb|EAR26161.1| hypothetical protein A20C1_09779 [marine actinobacterium PHSC20C1]
Length = 80
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
NN + R GF V+K G AV RN++RRRL+ A + G D V+ A D+
Sbjct: 2 NNERSTPARFGFIVSKAVGNAVVRNKVRRRLRAAAAQLLPR-VPGGSDIVVRALADSAQA 60
Query: 94 PFKELCNHFVERVRR 108
+ L E + R
Sbjct: 61 EWTTLQAEIAEGIDR 75
>gi|163786936|ref|ZP_02181384.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|163789215|ref|ZP_02183657.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|159875430|gb|EDP69492.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|159878796|gb|EDP72852.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
Length = 125
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAE 73
P + + N + G +V+K+ AV RNR++R L+EA RL
Sbjct: 31 PLRLIYLKTEFEDNSTLKTGVSVSKRLHKTAVARNRIKRLLREAYRLNKP 80
>gi|332296675|ref|YP_004438597.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
gi|332179778|gb|AEE15466.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
Length = 120
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+K+ + K G+ + VL NN R+ FT+ + G AVERNR +R
Sbjct: 16 RIKRSADIQNLFKTGKRVGVSGAKMFVLPNNTD--KNRIAFTLPRGYGNAVERNRSKRVS 73
Query: 65 KEAVRLCAEGVLKHGHDYVL 84
+EA R + L G+D +
Sbjct: 74 REAYRY-FKAFLNTGYDMIF 92
>gi|301169724|emb|CBW29325.1| unnamed protein product [Haemophilus influenzae 10810]
Length = 71
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 46 TVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
TV KK A ERNR++R ++E+ RL +D+V +AK + +
Sbjct: 2 TVAKKHLKRAHERNRIKRLVRESFRL--SQHCLPAYDFVFVAKNGIGKLDNSTFAQILEK 59
Query: 105 RVRRNKR 111
+R+ R
Sbjct: 60 LWQRHIR 66
>gi|325204856|gb|ADZ00310.1| ribonuclease P protein component [Neisseria meningitidis
M01-240355]
Length = 121
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ +R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|157165694|ref|YP_001466645.1| hypothetical protein CCC13826_1621 [Campylobacter concisus 13826]
gi|112800070|gb|EAT97414.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Campylobacter concisus 13826]
Length = 61
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
G AV RNR +R L+ A LK G Y+++AK I F ++C + ++
Sbjct: 2 GKAVVRNRAKRLLRAAF-FSISNELKDGT-YIMVAKNGITEISFDKICKNLSWSTKKM 57
>gi|59802474|ref|YP_209186.1| ribonuclease P [Neisseria gonorrhoeae FA 1090]
gi|194100147|ref|YP_002003286.1| ribonuclease P [Neisseria gonorrhoeae NCCP11945]
gi|254492911|ref|ZP_05106082.1| ribonuclease P [Neisseria gonorrhoeae 1291]
gi|260441337|ref|ZP_05795153.1| ribonuclease P [Neisseria gonorrhoeae DGI2]
gi|268593983|ref|ZP_06128150.1| ribonuclease P protein component [Neisseria gonorrhoeae 35/02]
gi|268596037|ref|ZP_06130204.1| ribonuclease P protein component [Neisseria gonorrhoeae FA19]
gi|268598160|ref|ZP_06132327.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|268600504|ref|ZP_06134671.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|268602737|ref|ZP_06136904.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|268681286|ref|ZP_06148148.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|268683457|ref|ZP_06150319.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|268685763|ref|ZP_06152625.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
gi|291044696|ref|ZP_06570405.1| ribonuclease P protein component [Neisseria gonorrhoeae DGI2]
gi|293397797|ref|ZP_06642003.1| ribonuclease P [Neisseria gonorrhoeae F62]
gi|67461224|sp|Q5F4W3|RNPA_NEIG1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690174|sp|B4RJJ5|RNPA_NEIG2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59719369|gb|AAW90774.1| putative ribonuclease P protein component [Neisseria gonorrhoeae FA
1090]
gi|193935437|gb|ACF31261.1| ribonuclease P [Neisseria gonorrhoeae NCCP11945]
gi|226511951|gb|EEH61296.1| ribonuclease P [Neisseria gonorrhoeae 1291]
gi|268547372|gb|EEZ42790.1| ribonuclease P protein component [Neisseria gonorrhoeae 35/02]
gi|268549825|gb|EEZ44844.1| ribonuclease P protein component [Neisseria gonorrhoeae FA19]
gi|268582291|gb|EEZ46967.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|268584635|gb|EEZ49311.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|268586868|gb|EEZ51544.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|268621570|gb|EEZ53970.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|268623741|gb|EEZ56141.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|268626047|gb|EEZ58447.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
gi|291011590|gb|EFE03586.1| ribonuclease P protein component [Neisseria gonorrhoeae DGI2]
gi|291611743|gb|EFF40812.1| ribonuclease P [Neisseria gonorrhoeae F62]
gi|317165574|gb|ADV09115.1| ribonuclease P [Neisseria gonorrhoeae TCDC-NG08107]
Length = 121
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ +R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|261363927|ref|ZP_05976810.1| ribonuclease P protein component [Neisseria mucosa ATCC 25996]
gi|288567940|gb|EFC89500.1| ribonuclease P protein component [Neisseria mucosa ATCC 25996]
Length = 112
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V + R+ + +N PR+G V+KK A +RN M+R +
Sbjct: 10 RLLKTDDFSSVFAFKNRRSRDLLQVSQSADNGLNHPRLGLVVSKKTAKRAHDRNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++ RL + HD+V+ + E N + +R+
Sbjct: 70 RDWFRLNKNSL--PPHDFVVRVRLAFNRQNAAEARNQLAQLMRK 111
>gi|325281343|ref|YP_004253885.1| Ribonuclease P protein component [Odoribacter splanchnicus DSM
20712]
gi|324313152|gb|ADY33705.1| Ribonuclease P protein component [Odoribacter splanchnicus DSM
20712]
Length = 139
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 37 SNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLK---HGH--DYVLI 85
R+ +V+KK AV+RNR++R +EA RL + GH D + I
Sbjct: 54 GEYPARIAISVSKKKFKRAVKRNRVKRLTREAYRLNKPEFYQHIIPGHTVDILFI 108
>gi|255037599|ref|YP_003088220.1| ribonuclease P protein component [Dyadobacter fermentans DSM
18053]
gi|254950355|gb|ACT95055.1| ribonuclease P protein component [Dyadobacter fermentans DSM
18053]
Length = 152
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
PF L + + + LP+V F+++K+ AV+RN +RRR +EA RL
Sbjct: 49 PFRLLYIYDQQSPPPLPQVLFSISKRHFKKAVDRNLIRRRCREAYRLH 96
>gi|302024560|ref|ZP_07249771.1| ribonuclease P [Streptococcus suis 05HAS68]
Length = 65
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN+++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 2 RNKIKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 53
>gi|89889715|ref|ZP_01201226.1| hypothetical protein BBFL7_01533 [Flavobacteria bacterium BBFL7]
gi|89517988|gb|EAS20644.1| hypothetical protein BBFL7_01533 [Flavobacteria bacterium BBFL7]
Length = 125
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKE 66
KK + + +RKGP + L N + ++G +V+K+ A +RNR++R L+E
Sbjct: 14 KKSIELLFTEGSSIRKGPIRCVYNLINMDQPH--KIGVSVSKRFFKKAPDRNRIKRLLRE 71
Query: 67 AVRLCAEGVLKH 78
A RL ++
Sbjct: 72 AYRLNQHDLITP 83
>gi|172041703|ref|YP_001801417.1| ribonuclease P protein component [Corynebacterium urealyticum DSM
7109]
gi|238056790|sp|B1VJ37|RNPA_CORU7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171853007|emb|CAQ05983.1| ribonuclease P protein component [Corynebacterium urealyticum DSM
7109]
Length = 127
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 15/121 (12%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQGCAVER 57
L+ F+ V KKG + + + P R G V+K G AV R
Sbjct: 7 RLRSSALFSTVVKKGARKGSRTLVVHLWTPEPGPDAPLELTGGPRAGLIVSKAVGNAVVR 66
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHD-------YVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ + R+L+ + + V+ A + KEL + + R
Sbjct: 67 HAVSRKLRAVLATIIDEDATAASPQLQETSFVVVRALPGSAEASSKELESDVRRCLSRLS 126
Query: 111 R 111
R
Sbjct: 127 R 127
>gi|295698379|ref|YP_003603034.1| ribonuclease P protein component [Candidatus Riesia pediculicola
USDA]
gi|291157408|gb|ADD79853.1| ribonuclease P protein component [Candidatus Riesia pediculicola
USDA]
Length = 116
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L K++ F K + + + + N PR+G ++KK + ERNR++R +
Sbjct: 8 RLSKKKFFDRAFKNPKKVS-YNGIVIFAKENFLQYPRIGLIISKKNIKHSSERNRIKRLI 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+E RL + K D++++ KR+ + + + +
Sbjct: 67 RECFRLNLFFLKK--MDFIVLVKRNLKNLENRRINKTLNKLW 106
>gi|297622616|ref|YP_003704050.1| ribonuclease P protein component [Truepera radiovictrix DSM 17093]
gi|297163796|gb|ADI13507.1| ribonuclease P protein component [Truepera radiovictrix DSM 17093]
Length = 130
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR--------VGFTVTKKQG 52
M I LK R F +++G SL + P VG V+KK G
Sbjct: 1 MPVIQSLKGDRAFQRLRRGRAGHAKLLSLRWRPLRPPSGAPAGAPVSTAFVGIVVSKKVG 60
Query: 53 CAVERNRMRRRL----------KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
AV RNR+RRRL EA A+G+ + V+IA+ DA + +L +
Sbjct: 61 KAVLRNRVRRRLREALRAVLACAEARANPAQGLRHPAFELVIIARPDAAEADYGQLRSAL 120
Query: 103 VERVRRNK 110
+R+ +
Sbjct: 121 EHALRKGQ 128
>gi|313678195|ref|YP_004055935.1| ribonuclease P protein component [Mycoplasma bovis PG45]
gi|312950222|gb|ADR24817.1| ribonuclease P protein component [Mycoplasma bovis PG45]
Length = 107
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + +S ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQHANNFLVLYYKEASS---FKLGITVPKKFCNAVFRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R++K + LK VLI +++ L F N + + K S
Sbjct: 58 KRQVKAIIHKLNAYDLKFHC--VLILRKEFLKEKFVAKFNATQKLFNKLKTS 107
>gi|296167145|ref|ZP_06849552.1| ribonuclease P protein component [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897467|gb|EFG77066.1| ribonuclease P protein component [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 113
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+++ +F VK G + + + + + P +G V K G AV+R+R+ RR
Sbjct: 1 MRRSTEFDATVKHGARAAQRDIVVHLRRAGDRDGSTPPHLGLIVGKSVGSAVDRHRVSRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+ R G L V+ A + L +RR S
Sbjct: 61 LRHVARSVL-GDLHDSDQVVIRALPGSRTASSGRLAEQLRRGLRRALESEGRQ 112
>gi|319949433|ref|ZP_08023494.1| ribonuclease P [Dietzia cinnamea P4]
gi|319436895|gb|EFV91954.1| ribonuclease P [Dietzia cinnamea P4]
Length = 92
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
PR G V+K G +V R+R+ RRL+ + V+ A + P +L
Sbjct: 17 PRFGLVVSKAVGDSVTRHRVSRRLRHIAAEVLAD-VDPDLMVVVRANPASATAPHADLVR 75
Query: 101 HFVERV 106
+
Sbjct: 76 DMRTGL 81
>gi|269114776|ref|YP_003302539.1| ribonuclease P protein component [Mycoplasma hominis]
gi|62177286|gb|AAX70925.1| RNAse P [Mycoplasma hominis ATCC 23114]
gi|268322401|emb|CAX37136.1| Ribonuclease P protein component [Mycoplasma hominis ATCC 23114]
Length = 109
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++KK +F + + + N ++ +VG ++ K+ AV RN + +++
Sbjct: 7 VVKKNWEFQKILDSHNQVVSKNLIIYFNKSD---FFKVGISIPKQFANAVLRNHYKNQIR 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L ++ V+IA++ L + + + + R
Sbjct: 64 SILRNIDFSTL--NYETVIIARKGFLSLDWNQKVKEVKKLYERIA 106
>gi|114322030|ref|YP_743713.1| ribonuclease P protein component [Alkalilimnicola ehrlichii MLHE-1]
gi|114228424|gb|ABI58223.1| ribonuclease P protein component [Alkalilimnicola ehrlichii MLHE-1]
Length = 123
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRL 64
L + + + V G + + VL N + PR+G ++++ AV+RNR++R
Sbjct: 16 RLTRPQDYRRVFSGAQKAADRYFT-VLARGNDQVGPRLGLAISRRVAPRAVDRNRLKRIA 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+E R + + DYV++A+ A L R
Sbjct: 75 REVFRQRQAALGQR--DYVVLARPAARTASKARLHRSLGRLYDR 116
>gi|239998131|ref|ZP_04718055.1| ribonuclease P [Neisseria gonorrhoeae 35/02]
gi|240013312|ref|ZP_04720225.1| ribonuclease P [Neisseria gonorrhoeae DGI18]
gi|240015757|ref|ZP_04722297.1| ribonuclease P [Neisseria gonorrhoeae FA6140]
gi|240079894|ref|ZP_04724437.1| ribonuclease P [Neisseria gonorrhoeae FA19]
gi|240112102|ref|ZP_04726592.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|240114848|ref|ZP_04728910.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|240117050|ref|ZP_04731112.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|240120384|ref|ZP_04733346.1| ribonuclease P [Neisseria gonorrhoeae PID24-1]
gi|240122688|ref|ZP_04735644.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|240124876|ref|ZP_04737762.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|240127389|ref|ZP_04740050.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
Length = 111
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ +R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 99
>gi|238021630|ref|ZP_04602056.1| hypothetical protein GCWU000324_01532 [Kingella oralis ATCC 51147]
gi|237866244|gb|EEP67286.1| hypothetical protein GCWU000324_01532 [Kingella oralis ATCC 51147]
Length = 115
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L +F+ V ++ F + + NN+ R+G V KK A +RN M+R +
Sbjct: 10 RLLTTEEFSSVFALRKQRSRSFLAVLQSENNALGHARLGLVVGKKAAKRANKRNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+E RL + + D+V+ + + E+C E +
Sbjct: 70 REWFRLHRQEL--PAKDFVVRVRVMFGRGQYHEVCQQLAELM 109
>gi|304388451|ref|ZP_07370557.1| ribonuclease P protein component [Neisseria meningitidis ATCC
13091]
gi|304337568|gb|EFM03731.1| ribonuclease P protein component [Neisseria meningitidis ATCC
13091]
Length = 121
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ +R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|218767521|ref|YP_002342033.1| ribonuclease P [Neisseria meningitidis Z2491]
gi|254804278|ref|YP_003082499.1| rnpA ribonuclease P [Neisseria meningitidis alpha14]
gi|13878725|sp|Q9JW46|RNPA_NEIMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|121051529|emb|CAM07826.1| putative ribonuclease P protein component [Neisseria meningitidis
Z2491]
gi|254667820|emb|CBA03808.1| rnpA ribonuclease P [Neisseria meningitidis alpha14]
gi|261393236|emb|CAX50859.1| ribonuclease P protein component (RNaseP protein; RNase P protein;
Protein C5) [Neisseria meningitidis 8013]
gi|308389999|gb|ADO32319.1| putative ribonuclease P protein component [Neisseria meningitidis
alpha710]
gi|319409785|emb|CBY90093.1| ribonuclease P protein component (RNaseP protein; RNase P protein;
Protein C5) [Neisseria meningitidis WUE 2594]
gi|325135496|gb|EGC58114.1| ribonuclease P protein component [Neisseria meningitidis M0579]
gi|325201460|gb|ADY96914.1| ribonuclease P protein component [Neisseria meningitidis
M01-240149]
gi|325207441|gb|ADZ02893.1| ribonuclease P protein component [Neisseria meningitidis NZ-05/33]
Length = 121
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ +R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|332291794|ref|YP_004430403.1| ribonuclease P protein component [Krokinobacter diaphorus 4H-3-7-5]
gi|332169880|gb|AEE19135.1| ribonuclease P protein component [Krokinobacter diaphorus 4H-3-7-5]
Length = 127
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 44 GFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDY-VLIAKRDALFIPFKELCNH 101
G +V+K+ AV RNR++R ++E+ RL + + G + +LI +P L
Sbjct: 51 GVSVSKRNFKLAVSRNRIKRLMRESYRLHKDLIDTKGTTFAMLILYTGQEEVPQAVLHKA 110
Query: 102 FVERVRR 108
V+ ++R
Sbjct: 111 MVKLIKR 117
>gi|282858211|ref|ZP_06267401.1| ribonuclease P protein component [Pyramidobacter piscolens W5455]
gi|282583942|gb|EFB89320.1| ribonuclease P protein component [Pyramidobacter piscolens W5455]
Length = 94
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R V KK A RNR RR LKE++R +K G + + L
Sbjct: 7 KAPDGKTRFAMAVGKKIAKAHLRNRGRRVLKESLRRLHP-WMKEGWWFACMLNEQGLRAK 65
Query: 95 FKELCNHFVERVRRN 109
E+ ++R
Sbjct: 66 ADEVYADLGALLKRK 80
>gi|254468359|ref|ZP_05081765.1| ribonuclease P protein component [beta proteobacterium KB13]
gi|207087169|gb|EDZ64452.1| ribonuclease P protein component [beta proteobacterium KB13]
Length = 110
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+S++ L F+ V R F + + N R G V KK AV RN
Sbjct: 3 VSSLTRLTNADDFSSVFILRKRFSGEF-INIFRKPNQLEYNRFGLIVGKKINKKAVARNY 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
M+R +++ +R D ++ K++ + + ++ + +
Sbjct: 62 MKRVIRDVLRQFDNSSK---LDIIIQVKKNFHKKDYPLVKKDIHSFIKTHAK 110
>gi|148245068|ref|YP_001219762.1| ribonuclease P protein component [Candidatus Vesicomyosocius
okutanii HA]
gi|229470488|sp|A5CVI0|RNPA_VESOH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146326895|dbj|BAF62038.1| ribonuclease P protein component [Candidatus Vesicomyosocius
okutanii HA]
Length = 113
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGV 75
K G++ KG ++ +VL PR+G ++KK A++RN+ +R +E R +
Sbjct: 22 KHGKIIKGQYW--QVLARKIDTPEPRLGLAISKKVHRLAIDRNKTKRIARETFRTHQNDL 79
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ +++++A+ + N + ++
Sbjct: 80 --NHWEFIVMAEHSKP-AKNSIMTNDLLHLFKK 109
>gi|169632027|ref|YP_001705676.1| ribonuclease P protein component [Mycobacterium abscessus ATCC
19977]
gi|238688931|sp|B1MN96|RNPA_MYCA9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169243994|emb|CAM65022.1| Ribonuclease P protein component [Mycobacterium abscessus]
Length = 127
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 7/127 (5%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCA 54
+ + K +F VK+G + + + P+VG V K G A
Sbjct: 2 LPTRHRMTKSSEFRQTVKRGVRTTHADLVIHLRRGCPDSACEQVEGPKVGLIVGKSVGGA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V R+R+ RRL+ A + V+ A + L + + R+ R
Sbjct: 62 VVRHRVSRRLRHAAAELLPKLEPVDR-MVIRALPSSSTALSASLRQQLRDGIDRSARRQE 120
Query: 115 SGKNFSR 121
R
Sbjct: 121 PAAERQR 127
>gi|148377327|ref|YP_001256203.1| ribonuclease P protein component [Mycoplasma agalactiae PG2]
gi|148291373|emb|CAL58756.1| Ribonuclease P protein component [Mycoplasma agalactiae PG2]
Length = 107
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + NS ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQFANNFLVLYYKQANS---FKLGITVPKKFCNAVLRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R++K + K VLI +++ L F + + + +
Sbjct: 58 KRQVKAIIHKLNVYDFKFHC--VLILRKEFLNEKFDAKFSATQKLFNKLR 105
>gi|260061318|ref|YP_003194398.1| hypothetical protein RB2501_06955 [Robiginitalea biformata
HTCC2501]
gi|88785450|gb|EAR16619.1| hypothetical protein RB2501_06955 [Robiginitalea biformata
HTCC2501]
Length = 128
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEG 74
+KG K L L +P + GF V K+ AV+RNR++R ++EA RL G
Sbjct: 23 RKGRTVKAYPLLLYYLETPLPEPVPFQAGFAVPKRSFRKAVQRNRIKRLMREAFRLEKPG 82
>gi|296314153|ref|ZP_06864094.1| ribonuclease P protein component [Neisseria polysaccharea ATCC
43768]
gi|296839187|gb|EFH23125.1| ribonuclease P protein component [Neisseria polysaccharea ATCC
43768]
Length = 121
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRKRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 109
>gi|254429851|ref|ZP_05043558.1| ribonuclease P protein component [Alcanivorax sp. DG881]
gi|196196020|gb|EDX90979.1| ribonuclease P protein component [Alcanivorax sp. DG881]
Length = 121
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVR 69
Q+ V K S +L N+ PR+G + +K+ AV+R R++RR++E R
Sbjct: 17 SQYQTVFDQPEWKVGLGSYLLLVTRNTQPQPRLGLVIGRKRAKRAVDRARIKRRVREQFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + G D +L+ + ++ +
Sbjct: 77 CRQQELA--GLDIILLVRGRIENPDPDQVTRDITRLFDK 113
>gi|269214505|ref|ZP_05986708.2| ribonuclease P protein component [Neisseria lactamica ATCC 23970]
gi|269209660|gb|EEZ76115.1| ribonuclease P protein component [Neisseria lactamica ATCC 23970]
gi|309379510|emb|CBX21876.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 123
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ F ++ N PR+G V KK A ERN M+R +
Sbjct: 12 RLLKTDDFSSVFAFRNRRSLDFLQVARSDGNGAGHPRLGLVVGKKTAKRANERNYMKRVI 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++ RL + D+V+ +R ++ + + + +
Sbjct: 72 RDWFRLNKNNLPPQ--DFVVRVRRKFDRDTARQARSELARLMSGDPAPERGKQA 123
>gi|15594786|ref|NP_212575.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi B31]
gi|224533593|ref|ZP_03674182.1| ribonuclease P protein component [Borrelia burgdorferi CA-11.2a]
gi|3915853|sp|P50069|RNPA_BORBU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|2688354|gb|AAB91511.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi B31]
gi|224513266|gb|EEF83628.1| ribonuclease P protein component [Borrelia burgdorferi CA-11.2a]
Length = 119
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRIRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
EA R E + D + + L + + + + V R +R
Sbjct: 68 EAFRKRLELLEGIALDIIFVVSYGKLTLTYFSIESLMKGLVLRCER 113
>gi|91215351|ref|ZP_01252322.1| ribonuclease P [Psychroflexus torquis ATCC 700755]
gi|91186303|gb|EAS72675.1| ribonuclease P [Psychroflexus torquis ATCC 700755]
Length = 118
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
L + + +VG +V+K+ AV+RNR++R+L+EA RL +L Y
Sbjct: 35 LLIRYVESELEYQQVGVSVSKRNFKKAVDRNRIKRQLREAYRLHKSQILDKNKSY 89
>gi|118594212|ref|ZP_01551559.1| ribonuclease P [Methylophilales bacterium HTCC2181]
gi|118439990|gb|EAV46617.1| ribonuclease P [Methylophilales bacterium HTCC2181]
Length = 110
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 35 NNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
N+ R+GF V KK AV RN +RR ++E ++ + L D V K+
Sbjct: 35 PNALGHFRIGFVVAKKMEKKAVRRNYIRRSIREVIKREIDKSL--SVDIVFRVKKTYYRP 92
Query: 94 PFKELCNHFVERVRRNK 110
FK + ++ + R K
Sbjct: 93 DFKLIKRELIDLLERIK 109
>gi|325127480|gb|EGC50409.1| ribonuclease P protein component [Neisseria meningitidis N1568]
Length = 121
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 109
>gi|86607502|ref|YP_476265.1| ribonuclease P [Synechococcus sp. JA-3-3Ab]
gi|123504619|sp|Q2JQX0|RNPA_SYNJA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|86556044|gb|ABD01002.1| ribonuclease P [Synechococcus sp. JA-3-3Ab]
Length = 126
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSL--EVLNNNNSNLLPRVGFTVTKKQGCAVER 57
+ L+ RR F + G+ R G L + + + +VG + KK + +
Sbjct: 2 LPAPYRLRDRRAFQALYQAGQRRSGAGLILLFQPMPAGCEGIPSQVGLVIGKKVSKSAVK 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR + LK G+ +LI+K + L + EL +++
Sbjct: 62 RNRLRRRLREILRPLCPNLKPGYRLLLISKPNLLTYKWPELQAEVHRLLQKADLLVSPSP 121
Query: 118 N 118
+
Sbjct: 122 D 122
>gi|195942020|ref|ZP_03087402.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi 80a]
gi|216264508|ref|ZP_03436500.1| ribonuclease P protein component [Borrelia burgdorferi 156a]
gi|218249336|ref|YP_002374952.1| ribonuclease P protein component [Borrelia burgdorferi ZS7]
gi|221218010|ref|ZP_03589476.1| ribonuclease P protein component [Borrelia burgdorferi 72a]
gi|223888677|ref|ZP_03623268.1| ribonuclease P protein component [Borrelia burgdorferi 64b]
gi|224532524|ref|ZP_03673149.1| ribonuclease P protein component [Borrelia burgdorferi WI91-23]
gi|225549524|ref|ZP_03770490.1| ribonuclease P protein component [Borrelia burgdorferi 118a]
gi|226321072|ref|ZP_03796614.1| ribonuclease P protein component [Borrelia burgdorferi 29805]
gi|226321750|ref|ZP_03797276.1| ribonuclease P protein component [Borrelia burgdorferi Bol26]
gi|226736856|sp|B7J207|RNPA_BORBZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|215980981|gb|EEC21788.1| ribonuclease P protein component [Borrelia burgdorferi 156a]
gi|218164524|gb|ACK74585.1| ribonuclease P protein component [Borrelia burgdorferi ZS7]
gi|221191958|gb|EEE18179.1| ribonuclease P protein component [Borrelia burgdorferi 72a]
gi|223885493|gb|EEF56592.1| ribonuclease P protein component [Borrelia burgdorferi 64b]
gi|224512596|gb|EEF82972.1| ribonuclease P protein component [Borrelia burgdorferi WI91-23]
gi|225369801|gb|EEG99248.1| ribonuclease P protein component [Borrelia burgdorferi 118a]
gi|226232939|gb|EEH31692.1| ribonuclease P protein component [Borrelia burgdorferi Bol26]
gi|226233482|gb|EEH32221.1| ribonuclease P protein component [Borrelia burgdorferi 29805]
gi|312148295|gb|ADQ30954.1| ribonuclease P protein component [Borrelia burgdorferi JD1]
gi|312149734|gb|ADQ29805.1| ribonuclease P protein component [Borrelia burgdorferi N40]
Length = 119
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRIRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
EA R E + D + + L + + + + V R +R
Sbjct: 68 EAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIESLMKGLVLRCER 113
>gi|319778794|ref|YP_004129707.1| Ribonuclease P protein component [Taylorella equigenitalis MCE9]
gi|317108818|gb|ADU91564.1| Ribonuclease P protein component [Taylorella equigenitalis MCE9]
Length = 123
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
S L +F V K + K F NN PR+G V KK AV+RN +
Sbjct: 10 SKDVRLLNPSEFDQVFKKRMIKRGVFLTLHYAQNNLG-YPRLGLVVAKKFFKKAVQRNAV 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVL 84
+R ++E RL + D ++
Sbjct: 69 KRVIREEFRLNKSNL--QHLDLIV 90
>gi|90023656|ref|YP_529483.1| ribonuclease P protein component [Saccharophagus degradans 2-40]
gi|123089894|sp|Q21DF8|RNPA_SACD2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|89953256|gb|ABD83271.1| ribonuclease P protein component [Saccharophagus degradans 2-40]
Length = 135
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRL 64
L F V + + +L ++ R+G V KK A +RN+ +R
Sbjct: 17 RLLNSSDFTPVFNDAPIRASNSEILILCKLSTTGKARLGLVVAKKNIKHANKRNQFKRIA 76
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRKS 123
+E+ RL + D +++A+R A + EL F +R K++ K+
Sbjct: 77 RESFRL--KQHKLPPIDAIVLARRGADSLSKVELRRMFDGLWKRVVKKAEKLTATQPEKT 134
>gi|207727480|ref|YP_002255874.1| ribonuclease p protein component [Ralstonia solanacearum MolK2]
gi|206590717|emb|CAQ56329.1| ribonuclease p protein component [Ralstonia solanacearum MolK2]
Length = 155
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP----FKELCNH 101
++R+ +E RL + L AK +P FK LC
Sbjct: 77 IKRQCRELFRLRQATLGGRDVLIRLHAKFPREDVPTVAAFKRLCRE 122
>gi|118620078|ref|YP_908410.1| ribonuclease P [Mycobacterium ulcerans Agy99]
gi|183985457|ref|YP_001853748.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
gi|166226726|sp|A0PX70|RNPA_MYCUA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690944|sp|B2HNT8|RNPA_MYCMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118572188|gb|ABL06939.1| ribonuclease P protein component RnpA [Mycobacterium ulcerans
Agy99]
gi|183178783|gb|ACC43893.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
Length = 120
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQGCAVER 57
+S +++ +F V++G P + V ++ PRVG + K G AVER
Sbjct: 2 LSARNRMRRSTEFDATVRQGVRTVQPDVIVHVRRAKECAADSSPRVGLIIAKSVGTAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 HRVARRLRHVARPMLMNLHPCDR-VVIRALPSSRHVSSAWLEQQLRSGLRRA 112
>gi|323436011|ref|ZP_08088226.1| ribonuclease P protein component [Dokdonia donghaensis MED134]
gi|321496326|gb|EAQ39654.2| ribonuclease P protein component [Dokdonia donghaensis MED134]
Length = 126
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYV-LIAKRDALF 92
+ +V +V+K+ AV RNR++R ++E+ RL + + G +V LI
Sbjct: 42 KEEGISHQVSVSVSKRNFKLAVSRNRIKRLMRESYRLHKDQICIKGTTFVMLIIYTGREE 101
Query: 93 IPFKELCNHFVERVRR 108
+ ++L V+ ++R
Sbjct: 102 VSQQQLHKAMVKLIKR 117
>gi|186477844|ref|YP_001859314.1| ribonuclease P protein component [Burkholderia phymatum STM815]
gi|184194303|gb|ACC72268.1| ribonuclease P protein component [Burkholderia phymatum STM815]
Length = 169
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ P F + + R+G + KK AV RN
Sbjct: 31 PKAARLLKTDEFSSVFRLRPWRRTPHFVVYARPTGSE---ARLGLVIGKKYAPRAVTRNL 87
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA RL G D +L
Sbjct: 88 VKRLAREAFRLRRAEFG--GWDVLL 110
>gi|225551972|ref|ZP_03772912.1| ribonuclease P protein component [Borrelia sp. SV1]
gi|225370970|gb|EEH00400.1| ribonuclease P protein component [Borrelia sp. SV1]
Length = 119
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+L + +L++ +N R+ T +K +V+RNR+RR KEA R E +
Sbjct: 19 KEGKLIRFSNLNLKMFYKSNHLAYSRILVTFSKGFRGSVKRNRIRRLFKEAFRKRLELLE 78
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
D + + L + + + + V R +R
Sbjct: 79 GIALDIIFVVSYSKLTLTYFSIESLMKGLVLRRER 113
>gi|227494187|ref|ZP_03924503.1| ribonuclease P [Actinomyces coleocanis DSM 15436]
gi|226831921|gb|EEH64304.1| ribonuclease P [Actinomyces coleocanis DSM 15436]
Length = 114
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 2/111 (1%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCA 72
+++G + + VGF V KK A +RN +RRL+ +R
Sbjct: 1 MAMRRGVHAGNHALVAHAVTGEDFPKESLVGFVVPKKVFKRANQRNLAKRRLRHLMRDRV 60
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
E L V+ A + EL + + + R +
Sbjct: 61 EQ-LPAHTLLVIRVLPGAQTADYSELQHSLDKALTRVIAKLNPESLEPIQP 110
>gi|149193810|ref|ZP_01870908.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
gi|149135763|gb|EDM24241.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
Length = 84
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
FF L +L++N + P V+KK AV RN+++RR++ VR+ GH +
Sbjct: 3 TKFFILYILSSNEFKVSP----VVSKKISKKAVIRNKIKRRVRNLVRIFFS----KGH-F 53
Query: 83 VLIAKRDALFIPFKELCNHF 102
++I K D I F EL N F
Sbjct: 54 LVIVKEDISTIDFIELENDF 73
>gi|269213743|ref|ZP_05982762.2| ribonuclease P protein component [Neisseria cinerea ATCC 14685]
gi|269145658|gb|EEZ72076.1| ribonuclease P protein component [Neisseria cinerea ATCC 14685]
Length = 121
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ ++ N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRKRRSRDLLQVSRSDGNGLGYPRLGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKR 88
++ RL + D+V+ A R
Sbjct: 70 RDWFRLNKNKLPPQ--DFVVRAHR 91
>gi|15677736|ref|NP_274899.1| ribonuclease P [Neisseria meningitidis MC58]
gi|13878726|sp|Q9JXS6|RNPA_NEIMB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|7227162|gb|AAF42235.1| ribonuclease P protein component [Neisseria meningitidis MC58]
gi|325133544|gb|EGC56207.1| ribonuclease P protein component [Neisseria meningitidis M13399]
gi|325143616|gb|EGC65935.1| ribonuclease P protein component [Neisseria meningitidis
M01-240013]
gi|325200957|gb|ADY96412.1| ribonuclease P protein component [Neisseria meningitidis H44/76]
gi|325206812|gb|ADZ02265.1| ribonuclease P protein component [Neisseria meningitidis
M04-240196]
Length = 121
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 109
>gi|225010319|ref|ZP_03700791.1| ribonuclease P protein component [Flavobacteria bacterium MS024-3C]
gi|225005798|gb|EEG43748.1| ribonuclease P protein component [Flavobacteria bacterium MS024-3C]
Length = 153
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLK 77
G+ L + N N + + F+V+K+ AV+RNR++R L+ + R + +
Sbjct: 54 GKAISAYPLRLVFIANPNGSGPMQCAFSVSKRHFKKAVDRNRIKRLLRASYRKIKPALYE 113
Query: 78 H 78
Sbjct: 114 K 114
>gi|108945892|gb|ABG23482.1| RnpA [Sulfurihydrogenibium azorense]
Length = 111
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 9 KRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKE 66
K++ V G +F L N PR F +KK + +RNR++R L+E
Sbjct: 7 KKKDIQEVFETGNKINSRYFYLVFKKNQIG--YPRFAFIASKKIFKKSTQRNRVKRLLRE 64
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
VRL + D +L+ K + L + +L +F+ + + +R
Sbjct: 65 VVRLLLPKLNVLSCDIILVGKSEILNLKSFQLKENFISILEKLER 109
>gi|241665035|ref|YP_002983395.1| ribonuclease P [Ralstonia pickettii 12D]
gi|240867062|gb|ACS64723.1| ribonuclease P protein component [Ralstonia pickettii 12D]
Length = 140
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N R+G + KK AVERN
Sbjct: 7 PKAARLTKTDEFSSVFALRPVRRSRHFVLYV--RANGAAQARLGVVIGKKFAKRAVERNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R+ +E RL + G D ++
Sbjct: 65 IKRQCRELFRLRQPLLG--GRDVLI 87
>gi|110835615|ref|YP_694474.1| ribonuclease P, protein component [Alcanivorax borkumensis SK2]
gi|123050193|sp|Q0VKU6|RNPA_ALCBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110648726|emb|CAL18202.1| ribonuclease P, protein component [Alcanivorax borkumensis SK2]
Length = 121
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
Q+ V K +L NS PR+G + +K AV+R R++RR++E R
Sbjct: 17 PQYQTVFDQPEWKVGLGGYLLLVTRNSQPHPRLGLVIGRKRVKRAVDRARIKRRVREQFR 76
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + G D +L+ + ++ +
Sbjct: 77 CRQQELA--GLDIILLVRGRIENPNPNQVTLDITRLFDK 113
>gi|330470831|ref|YP_004408574.1| ribonuclease P protein component [Verrucosispora maris AB-18-032]
gi|328813802|gb|AEB47974.1| ribonuclease P protein component [Verrucosispora maris AB-18-032]
Length = 137
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 21/133 (15%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLN--------------------NNNSNLL 40
++ L++ FA + R G + L NS +
Sbjct: 2 LTAAQRLRRSSDFAAAVRSGRRAGRGTVVVHLTLPDTTGGTPDVAPEPVRGGTEENSAPV 61
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R GF V+K G AV RN++RRR + L G V+ A A ++ L
Sbjct: 62 SRAGFVVSKAVGPAVVRNKVRRR-LRHLVRERLSELPAGSTLVVRALPAAAEATYQRLGA 120
Query: 101 HFVERVRRNKRSY 113
+ +R + S
Sbjct: 121 DLGDALRAARTSR 133
>gi|320095105|ref|ZP_08026814.1| ribonuclease P protein component [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977972|gb|EFW09606.1| ribonuclease P protein component [Actinomyces sp. oral taxon 178
str. F0338]
Length = 120
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F + R G + + VGF V K+ A RNR++R+L+ +R
Sbjct: 12 ADFRSTIRTGSRGGDPLVVVHARTDEGEENRLVGFVVPKREIKRANGRNRVKRQLRHIMR 71
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
G L G V+ A AL +EL + R R + G
Sbjct: 72 ERV-GSLPPGARVVVRASGRALGASSQELARRLDGALARAWRKWSGGGER 120
>gi|313669123|ref|YP_004049407.1| ribonuclease P protein component [Neisseria lactamica ST-640]
gi|313006585|emb|CBN88050.1| putative ribonuclease P protein component [Neisseria lactamica
020-06]
Length = 121
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ F ++ N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSLDFLQVARSDGNGAGHPRLGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++ RL + D+V+ +R ++ + + + S +
Sbjct: 70 RDWFRLNKNNLPPQ--DFVVRVRRKFDRDTARQARSELARLMSGDPASERGKQA 121
>gi|83747142|ref|ZP_00944185.1| Ribonuclease P protein component [Ralstonia solanacearum UW551]
gi|207741914|ref|YP_002258306.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609]
gi|83726117|gb|EAP73252.1| Ribonuclease P protein component [Ralstonia solanacearum UW551]
gi|206593300|emb|CAQ60227.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609]
Length = 155
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP----FKELCNH 101
++R+ +E RL + L AK +P FK LC
Sbjct: 77 IKRQCRELFRLRQATLGGRDVLVRLHAKFPREDVPTVAAFKRLCRE 122
>gi|291319995|ref|YP_003515253.1| ribonuclease P protein component [Mycoplasma agalactiae]
gi|290752324|emb|CBH40295.1| Ribonuclease P protein component [Mycoplasma agalactiae]
Length = 107
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + NS ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQFANNFLVLYYKPANS---FKLGITVPKKFCNAVLRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R++K + K VLI +++ L F + + + +
Sbjct: 58 KRQVKAIIHKLNVYDFKFHC--VLILRKEFLNEKFDAKFSATQKLFNKLR 105
>gi|121634187|ref|YP_974432.1| ribonuclease P [Neisseria meningitidis FAM18]
gi|166226728|sp|A1KS00|RNPA_NEIMF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120865893|emb|CAM09629.1| putative ribonuclease P protein component [Neisseria meningitidis
FAM18]
gi|325131543|gb|EGC54250.1| ribonuclease P protein component [Neisseria meningitidis M6190]
gi|325139202|gb|EGC61748.1| ribonuclease P protein component [Neisseria meningitidis ES14902]
Length = 121
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ +N N PR+G V KK A ERN M+R +
Sbjct: 10 RLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ RL + D+V+ R K+ + +
Sbjct: 70 RDWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 109
>gi|308190320|ref|YP_003923251.1| hypothetical protein MFE_08030 [Mycoplasma fermentans JER]
gi|307625062|gb|ADN69367.1| hypothetical protein MFE_08030 [Mycoplasma fermentans JER]
Length = 83
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ + N++ ++G TV KK AV RN +R+LK + K +VLI +
Sbjct: 2 IIYYMPNDD----FKIGITVPKKFCNAVLRNYYKRQLKSIIHSLNLYGEKMH--FVLIPR 55
Query: 88 RDALFIPFKE---LCNHFVERVRRNKRS 112
+D L + +++ + E+++ K+
Sbjct: 56 KDFLNLIYEDKLTITKKLFEKIKNGKQK 83
>gi|225548631|ref|ZP_03769678.1| ribonuclease P protein component [Borrelia burgdorferi 94a]
gi|225370661|gb|EEH00097.1| ribonuclease P protein component [Borrelia burgdorferi 94a]
Length = 119
Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRLRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
EA R E + D + + L + + + + V R +R
Sbjct: 68 EAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIESLMKGLVLRCER 113
>gi|187930820|ref|YP_001901307.1| ribonuclease P protein component [Ralstonia pickettii 12J]
gi|309780184|ref|ZP_07674935.1| ribonuclease P [Ralstonia sp. 5_7_47FAA]
gi|238691783|sp|B2U822|RNPA_RALPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|187727710|gb|ACD28875.1| ribonuclease P protein component [Ralstonia pickettii 12J]
gi|308920887|gb|EFP66533.1| ribonuclease P [Ralstonia sp. 5_7_47FAA]
Length = 140
Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 7 PKAARLTKTDEFSSVFALRPVRRSRHFVLYV--RANGDRPARLGVVIGKKFAKRAVERNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R+ +E RL + G D ++
Sbjct: 65 IKRQCRELFRLRQPLLG--GRDVLI 87
>gi|300705599|ref|YP_003747202.1| ribonuclease p protein component [Ralstonia solanacearum CFBP2957]
gi|299073263|emb|CBJ44622.1| Ribonuclease P protein component [Ralstonia solanacearum CFBP2957]
Length = 155
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGYPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP----FKELCNH 101
++R+ +E RL + L AK +P FK LC
Sbjct: 77 IKRQCRELFRLRQATLGGRDVLIRLHAKFPREDVPTVAAFKRLCRE 122
>gi|316985522|gb|EFV64469.1| ribonuclease P protein component [Neisseria meningitidis H44/76]
Length = 111
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 99
>gi|255076667|ref|XP_002502007.1| predicted protein [Micromonas sp. RCC299]
gi|226517272|gb|ACO63265.1| predicted protein [Micromonas sp. RCC299]
Length = 393
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 6 ILKKRRQFALV--KKGELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKK-QGCAVERNRM 60
+K +R F V ++G G ++ +N R+G V KK AV+RN +
Sbjct: 309 RIKSQRDFQRVMNQQGNNFNGKLMRIKYCSNEGLKDVDCTRIGIKVPKKFVKRAVDRNLV 368
Query: 61 RRRLKEAVRLCAE 73
+RR++E R +
Sbjct: 369 KRRIREIFRRNKD 381
>gi|121635909|ref|YP_976132.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|121639834|ref|YP_980058.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663790|ref|YP_001285313.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148825131|ref|YP_001289885.1| ribonuclease P [Mycobacterium tuberculosis F11]
gi|224992329|ref|YP_002647019.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800973|ref|YP_003033975.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|254366459|ref|ZP_04982503.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|254548927|ref|ZP_05139374.1| ribonuclease P [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260184852|ref|ZP_05762326.1| ribonuclease P [Mycobacterium tuberculosis CPHL_A]
gi|260198983|ref|ZP_05766474.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|260203136|ref|ZP_05770627.1| ribonuclease P [Mycobacterium tuberculosis K85]
gi|289441366|ref|ZP_06431110.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289445524|ref|ZP_06435268.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289567880|ref|ZP_06448107.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289572575|ref|ZP_06452802.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289747767|ref|ZP_06507145.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289748461|ref|ZP_06507839.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289756058|ref|ZP_06515436.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289760096|ref|ZP_06519474.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|289764114|ref|ZP_06523492.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|294995605|ref|ZP_06801296.1| ribonuclease P [Mycobacterium tuberculosis 210]
gi|297636610|ref|ZP_06954390.1| ribonuclease P [Mycobacterium tuberculosis KZN 4207]
gi|297733605|ref|ZP_06962723.1| ribonuclease P [Mycobacterium tuberculosis KZN R506]
gi|298527395|ref|ZP_07014804.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|313660936|ref|ZP_07817816.1| ribonuclease P [Mycobacterium tuberculosis KZN V2475]
gi|2808708|emb|CAA16236.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium tuberculosis H37Rv]
gi|31620694|emb|CAD96140.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium bovis AF2122/97]
gi|121491556|emb|CAL70013.1| Ribonuclease p protein component rnpA (RNaseP) [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|121495482|emb|CAL73971.1| Ribonuclease P protein component rnpA [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134151971|gb|EBA44016.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|148507942|gb|ABQ75751.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148723658|gb|ABR08283.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
F11]
gi|224775445|dbj|BAH28251.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322477|gb|ACT27080.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|289414285|gb|EFD11525.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289418482|gb|EFD15683.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289537006|gb|EFD41584.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289541633|gb|EFD45282.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289688295|gb|EFD55783.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289689048|gb|EFD56477.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289696645|gb|EFD64074.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289711620|gb|EFD75636.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|289715660|gb|EFD79672.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|298497189|gb|EFI32483.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|326905756|gb|EGE52689.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
W-148]
gi|328460701|gb|AEB06124.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 4207]
Length = 125
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+++ F VK G + S PRVG + K G AVER+R+ RRL
Sbjct: 16 RMRRSADFETTVKHGMRTVRSDMVVYWW--RGSGGGPRVGLIIAKSVGSAVERHRVARRL 73
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ + + H V+ A + + L +RR
Sbjct: 74 RHVAGSIVKELHPSDH-VVIRALPSSRHVSSARLEQQLRCGLRRA 117
>gi|313902788|ref|ZP_07836185.1| ribonuclease P protein component [Thermaerobacter subterraneus DSM
13965]
gi|313466908|gb|EFR62425.1| ribonuclease P protein component [Thermaerobacter subterraneus DSM
13965]
Length = 140
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVER 57
+ L++ F V++ G + L + R GFTV ++ G AV R
Sbjct: 3 LPRPWRLQRGDAFRQVRRQGRSWSNRWVVLFAWRPGGAGGDDPSRAGFTVGRRLGKAVRR 62
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
NR+RR L EA R A ++ G V +A+ A + F + +R+ +
Sbjct: 63 NRVRRLLAEAYRQLAPR-VEGGWWLVFVARDAAAGMDFGTARRAVEDVLRKARILRPP 119
>gi|118602998|ref|YP_904213.1| ribonuclease P protein component [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567937|gb|ABL02742.1| ribonuclease P protein component [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 106
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
++ PR+ ++KK AV+RNR++R +E R + + ++V++ K
Sbjct: 27 IIAKKIDRPTPRLRLVISKKVHKLAVDRNRVKRIARETFRTHQNDL--NHWEFVVMVKHS 84
Query: 90 ALFIPFKELCNHFVERVRR 108
+ + + ++
Sbjct: 85 KPTKN-SIITDDLLHLFKK 102
>gi|262204661|ref|YP_003275869.1| ribonuclease P protein component [Gordonia bronchialis DSM 43247]
gi|262088008|gb|ACY23976.1| ribonuclease P protein component [Gordonia bronchialis DSM 43247]
Length = 132
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 14/116 (12%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNN----NSNLLPR---------VGFTVTKKQ 51
+ + F+ + G F L + + + R +G V+K
Sbjct: 7 RISRGSDFSRTLRTGVRVSARDFVLHASPVPPVWPDDSRIRRDVALHGGPWLGLIVSKAV 66
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
G AV R+ + RRL+ A + V+ A R A EL R
Sbjct: 67 GPAVTRHAVARRLRAAFTATMDSCPSPETYVVVRAHRSAAQRSSVELAEQLEAAWR 122
>gi|154508236|ref|ZP_02043878.1| hypothetical protein ACTODO_00730 [Actinomyces odontolyticus ATCC
17982]
gi|293191010|ref|ZP_06609054.1| ribonuclease P protein component [Actinomyces odontolyticus F0309]
gi|153797870|gb|EDN80290.1| hypothetical protein ACTODO_00730 [Actinomyces odontolyticus ATCC
17982]
gi|292820697|gb|EFF79663.1| ribonuclease P protein component [Actinomyces odontolyticus F0309]
Length = 110
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F + R G + + + VGF V K+ A RNR++R+L+ +R
Sbjct: 5 ADFTAAIRQGTRAGDPLVVVHVRADEERNSRLVGFVVPKREIKRANGRNRVKRQLRHLMR 64
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
L G V+ A AL +P KEL H + R R
Sbjct: 65 ERIAD-LPKGARVVVRASSKALGVPSKELGEHLDRVMARAWRK 106
>gi|161869310|ref|YP_001598477.1| ribonuclease P [Neisseria meningitidis 053442]
gi|161594863|gb|ABX72523.1| ribonuclease P protein component [Neisseria meningitidis 053442]
gi|325197599|gb|ADY93055.1| ribonuclease P protein component [Neisseria meningitidis G2136]
Length = 111
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 99
>gi|240168407|ref|ZP_04747066.1| ribonuclease P [Mycobacterium kansasii ATCC 12478]
Length = 120
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVER 57
+S +++ +F VK G P + V + PRVG + K G AVER
Sbjct: 2 LSARNRMRRSTEFDATVKYGVRTVQPDVVVHVRRGTQSQDCSGPRVGLIIAKSVGTAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 HRVARRLRHVARPLLGNLHPCDQ-VVIRALPSSRQVSSVRLEQQVRRGLRRA 112
>gi|303276464|ref|XP_003057526.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461878|gb|EEH59171.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 344
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQ-GCAVERNRMR 61
LK + F V+ G G ++ + + R+G KK AV+RN ++
Sbjct: 166 RLKTQADFTRVQNTGRSFNGKLVRIKWCDTTDVPDVDNTRLGIKAPKKLLRRAVDRNSVK 225
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
RR+++ R E D ++ DAL P+ ++ +
Sbjct: 226 RRVRDIFRKNKEAW-PSTCDMLVFCGEDALRAPYADVKAEML 266
>gi|74318844|ref|YP_316584.1| ribonuclease P protein component [Thiobacillus denitrificans ATCC
25259]
gi|74058339|gb|AAZ98779.1| ribonuclease P protein component [Thiobacillus denitrificans ATCC
25259]
Length = 99
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV--LIA 86
V+ N+ PR+G V K+ AV+RNR++R ++E+ R + DYV LIA
Sbjct: 1 MVMARPNAVGYPRLGMVVGKRLLARAVDRNRVKRCVRESFRQVLAEL--PACDYVVRLIA 58
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+ ++L FV +R + +
Sbjct: 59 -KPLPGDEARDLPRTFVRAGKRAMAKWPGEAAAPQAP 94
>gi|330831725|ref|YP_004394677.1| ribonuclease P protein component [Aeromonas veronii B565]
gi|328806861|gb|AEB52060.1| Ribonuclease P protein component [Aeromonas veronii B565]
Length = 68
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K AV RNR++R ++E+ RL + D V+IAK + +EL + R
Sbjct: 4 KALKRAVWRNRVKRVVRESFRL--KQHQLPAIDIVVIAKAGVKEMDNEELFKLLEKLWRT 61
Query: 109 NKRS 112
R
Sbjct: 62 LSRR 65
>gi|292572235|gb|ADE30150.1| Ribonuclease P [Rickettsia prowazekii Rp22]
Length = 119
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQ-GCAVE 56
I LK +++F L+ K GE +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RN+++RR++ +R + ++I K+ I F L + + RN
Sbjct: 63 RNKIKRRIRHLMRIIVNDSNFKAIKFAIIIIPKKGFEEINFSHLQYELSKIILRN 117
>gi|94263633|ref|ZP_01287442.1| ribonuclease P protein [delta proteobacterium MLMS-1]
gi|93455938|gb|EAT06093.1| ribonuclease P protein [delta proteobacterium MLMS-1]
Length = 129
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGCAVE 56
+ +++K ++ L ++G +G F+L + + R+G +V+ AV
Sbjct: 9 LPKSALIRKPDEYRQLYRRGRRVRGDNFALVYRLVEPSAAAAAGARLGISVS-GVRSAVR 67
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
RNR++R ++E RL +L G + + +RD
Sbjct: 68 RNRIKRLIREFFRLRRP-LLHPGLELIFTVRRD 99
>gi|332664718|ref|YP_004447506.1| ribonuclease P protein component [Haliscomenobacter hydrossis DSM
1100]
gi|332333532|gb|AEE50633.1| Ribonuclease P protein component [Haliscomenobacter hydrossis DSM
1100]
Length = 136
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 45 FTVT---KKQGCAVERNRMRRRLKEAVRLCAEGVLK-----HGHDYVLIAKRDALFIPFK 96
FTV+ KK AV+RNR+RR+++EA RL + + + +++ + +
Sbjct: 48 FTVSVPKKKFKKAVDRNRLRRQIREAYRLNKQLLYRNLDPSQKVYALMVIYVAKETVEYT 107
Query: 97 ELCNHFVERVRRNKRSYYSGKNFSRK 122
E+ + +RR + +N +
Sbjct: 108 EIETNMHRGLRRLGKILRDQQNQPTQ 133
>gi|111115268|ref|YP_709886.1| ribonuclease P protein component [Borrelia afzelii PKo]
gi|122956368|sp|Q0SN68|RNPA_BORAP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110890542|gb|ABH01710.1| ribonuclease P protein component [Borrelia afzelii PKo]
Length = 111
Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G L + +L++ +N + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGNLIRFSNLNLKMFCKSNHLIYSRLLVTFSKSFRGSVKRNRVRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
EA R E + D + + D L + + + + V
Sbjct: 68 EAFRKRLELLEGRAIDIIFVVYYDRLDLTYFSIESLMKSLV 108
>gi|15604461|ref|NP_220979.1| ribonuclease P [Rickettsia prowazekii str. Madrid E]
gi|6226020|sp|Q9ZCU8|RNPA_RICPR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3861155|emb|CAA15055.1| RIBONUCLEASE P (rnpA) [Rickettsia prowazekii]
Length = 121
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQ-GCAVE 56
I LK +++F L+ K GE +F L + S +G V++K AV
Sbjct: 5 ITSLKNQKEFELINKLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 64
Query: 57 RNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RN+++RR++ +R + ++I K+ I F L + + RN
Sbjct: 65 RNKIKRRIRHLMRIIVNDSNFKAIKFAIIIIPKKGFEEINFSHLQYELSKIILRN 119
>gi|82703891|ref|YP_413457.1| ribonuclease P protein component [Nitrosospira multiformis ATCC
25196]
gi|82411956|gb|ABB76065.1| ribonuclease P protein component [Nitrosospira multiformis ATCC
25196]
Length = 86
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L+V N L R+G V K AV RNR++R L+E R E + G D V+
Sbjct: 1 MLQVFAKPNGLLHSRLGLIVAGKIERLAVNRNRVKRVLREVFRARQEDMA--GLDLVMRL 58
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSY 113
+ A +L + + R ++
Sbjct: 59 RCRASDRSPVQLADEARRLMIRLQQCR 85
>gi|254447349|ref|ZP_05060815.1| ribonuclease P protein component [gamma proteobacterium HTCC5015]
gi|198262692|gb|EDY86971.1| ribonuclease P protein component [gamma proteobacterium HTCC5015]
Length = 116
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
++ L F+ V K + GP ++ V N R+G V+KK G AV RN
Sbjct: 3 LTRQATLTGPDDFSFVFAKAKKIYGPHLTVLVRPNGRG--AARLGLAVSKKHTGNAVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R+RR +KE+ R E + G D V+++KR + +EL ++ + +
Sbjct: 61 RVRRIVKESFRHHREQLG--GLDIVVLSKRGVAEVERRELRQAIDQQWQSTLKK 112
>gi|21672845|ref|NP_660910.1| ribonuclease P [Chlorobium tepidum TLS]
gi|26006870|sp|Q8KGG4|RNPA_CHLTE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21645893|gb|AAM71252.1| ribonuclease P protein component, putative [Chlorobium tepidum
TLS]
Length = 154
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVG----FTVTKK-QGCAVERNRMRRRLKEAVRL 70
+G KG F L + PR+ FTV KK AV+RNR++R ++EA RL
Sbjct: 32 QGGRLKGGFLLLIYSASRPVEQAPRIPVRVLFTVGKKLVPRAVDRNRIKRLMREAYRL 89
>gi|33591702|ref|NP_879346.1| ribonuclease P [Bordetella pertussis Tohama I]
gi|33598886|ref|NP_886529.1| ribonuclease P [Bordetella parapertussis 12822]
gi|33603965|ref|NP_891525.1| ribonuclease P [Bordetella bronchiseptica RB50]
gi|46397709|sp|Q7VSD8|RNPA_BORPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397710|sp|Q7W2K3|RNPA_BORPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397711|sp|Q7WDJ7|RNPA_BORBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33568941|emb|CAE35355.1| ribonuclease P protein component [Bordetella bronchiseptica RB50]
gi|33571345|emb|CAE44822.1| ribonuclease P protein component [Bordetella pertussis Tohama I]
gi|33575016|emb|CAE39682.1| ribonuclease P protein component [Bordetella parapertussis]
gi|332381121|gb|AEE65968.1| ribonuclease P [Bordetella pertussis CS]
Length = 123
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVL----NNNNSNLLPRVGFTVTKKQG-CAV 55
+ L + +FA KG F + ++ R+G + K+ AV
Sbjct: 6 LPAEARLHRPSEFAAALKGRRLARGAFFIVSASPCAPADDQPARARLGLVIAKRFAARAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RN ++R ++EA R A + DYV+ L
Sbjct: 66 TRNTLKRVIREAFR--ARRLALPAQDYVVRLHSKLTPASLTALKRS 109
>gi|15843557|ref|NP_338594.1| ribonuclease P [Mycobacterium tuberculosis CDC1551]
gi|161352458|ref|NP_218440.2| ribonuclease P [Mycobacterium tuberculosis H37Rv]
gi|161511523|ref|NP_857589.2| ribonuclease P [Mycobacterium bovis AF2122/97]
gi|254233405|ref|ZP_04926731.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289556191|ref|ZP_06445401.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308232613|ref|ZP_07664134.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308369279|ref|ZP_07666710.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308371504|ref|ZP_07667186.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308371554|ref|ZP_07667205.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308372784|ref|ZP_07667458.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308373865|ref|ZP_07433895.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308375036|ref|ZP_07667931.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308376283|ref|ZP_07668242.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308378518|ref|ZP_07668777.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308379668|ref|ZP_07669018.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308380867|ref|ZP_07669311.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|61234238|sp|P0A5X8|RNPA_MYCTU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|61234242|sp|P0A5X9|RNPA_MYCBO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1321902|emb|CAA63255.1| rnpA [Mycobacterium tuberculosis H37Rv]
gi|13883935|gb|AAK48408.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551]
gi|124603198|gb|EAY61473.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289440823|gb|EFD23316.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308213437|gb|EFO72836.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308328154|gb|EFP17005.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308328616|gb|EFP17467.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308336271|gb|EFP25122.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308339877|gb|EFP28728.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308343889|gb|EFP32740.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308347673|gb|EFP36524.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308351591|gb|EFP40442.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308352298|gb|EFP41149.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308356301|gb|EFP45152.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308360188|gb|EFP49039.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|323717339|gb|EGB26544.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551A]
Length = 116
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+++ F VK G + S PRVG + K G AVER+R+ RRL
Sbjct: 7 RMRRSADFETTVKHGMRTVRSDMVVYWW--RGSGGGPRVGLIIAKSVGSAVERHRVARRL 64
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ + + H V+ A + + L +RR
Sbjct: 65 RHVAGSIVKELHPSDH-VVIRALPSSRHVSSARLEQQLRCGLRRA 108
>gi|325286213|ref|YP_004262003.1| Ribonuclease P protein component [Cellulophaga lytica DSM 7489]
gi|324321667|gb|ADY29132.1| Ribonuclease P protein component [Cellulophaga lytica DSM 7489]
Length = 136
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
G+ L L + N +VG +V K+ AV+RNR++R L+E RL
Sbjct: 31 ADGKSVSSYPVKLIYLPCSLQNTPLKVGVSVPKRNFKSAVDRNRIKRLLREGYRLN 86
>gi|312797631|ref|YP_004030553.1| ribonuclease P protein component [Burkholderia rhizoxinica HKI 454]
gi|312169406|emb|CBW76409.1| Ribonuclease P protein component (EC 3.1.26.5) [Burkholderia
rhizoxinica HKI 454]
Length = 219
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + + F L + R+G V KKQ AV RN
Sbjct: 52 PKAARLLKTDEFSSVFRLRPWARSAHFVLYGRP---TGQAARLGVVVGKKQAPRAVTRNL 108
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++EA R+ + G D ++
Sbjct: 109 VKRLVREAFRV--RRLELTGWDVLI 131
>gi|319788689|ref|YP_004148164.1| ribonuclease P protein component [Pseudoxanthomonas suwonensis
11-1]
gi|317467201|gb|ADV28933.1| ribonuclease P protein component [Pseudoxanthomonas suwonensis
11-1]
Length = 138
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRM 60
++ R ++ V +G R G SL L+ + PR+G V++K AV RNR+
Sbjct: 10 PRSARVRLRVEYTRVFEGGRRLGD--SLIGLHWLPGDGEPRLGLAVSRKVDPRAVGRNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L++ +R G+ G DYV++A+ A +++ F+ +R+
Sbjct: 68 KRALRDCMRHHRAGMA--GGDYVVVARPAAARATGEQIRQSFLRLLRK 113
>gi|302870729|ref|YP_003839366.1| ribonuclease P protein component [Micromonospora aurantiaca ATCC
27029]
gi|315506967|ref|YP_004085854.1| ribonuclease p protein component [Micromonospora sp. L5]
gi|302573588|gb|ADL49790.1| ribonuclease P protein component [Micromonospora aurantiaca ATCC
27029]
gi|315413586|gb|ADU11703.1| ribonuclease P protein component [Micromonospora sp. L5]
Length = 108
Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
+ R GF V+K G AV RN++R R + G L G V+ A A +
Sbjct: 29 SAPSRAGFVVSKAVGGAVVRNKVR-RRLRHLVRERLGELPAGTTLVVRALPAAADATYAR 87
Query: 98 LCNHF 102
L
Sbjct: 88 LGADL 92
>gi|119900280|ref|YP_935493.1| ribonuclease P [Azoarcus sp. BH72]
gi|166226699|sp|A1KCQ1|RNPA_AZOSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119672693|emb|CAL96607.1| ribonuclease P [Azoarcus sp. BH72]
Length = 120
Score = 42.9 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L K +F+ V +G +F L N+ R+G V KK A RN ++R
Sbjct: 16 RLHKTDEFSSVFAFRRALRGRYFMLHY--RPNALTTARLGVVVAKKLAKRANVRNLVKRI 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E R + + HD ++ L ++ R ++
Sbjct: 74 ARERFRR--QRTVLPAHDLIVRLHAPVTEASRAALNQDLLQLFGRLPQT 120
>gi|51473789|ref|YP_067546.1| ribonuclease P [Rickettsia typhi str. Wilmington]
gi|81610776|sp|Q68WC8|RNPA_RICTY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51460101|gb|AAU04064.1| ribonuclease P [Rickettsia typhi str. Wilmington]
Length = 118
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQ-GCAVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGQKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RN+++RR++ +R + V ++I ++ I F L + + RN
Sbjct: 63 RNKIKRRIRHLMRIIVNDSSVKAIKFAIIIIPRKGFEEINFSHLNYELSKIILRN 117
>gi|317401602|gb|EFV82228.1| ribonuclease P protein component [Achromobacter xylosoxidans C54]
Length = 123
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQG-CAV 55
+ L + +FA KG F + +N+ R+G + K+ A
Sbjct: 6 LPPEARLHRPSEFAAALKGRRLARGAFFVVSAASNDLPPDQAPCARLGLVIAKRFAAHAT 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RN ++R ++EA R + DYV+ L
Sbjct: 66 TRNALKRVIREAFRH--RRLGLPAKDYVVRLHSKVTPATLTALKQA 109
>gi|298369731|ref|ZP_06981048.1| ribonuclease P protein component [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282288|gb|EFI23776.1| ribonuclease P protein component [Neisseria sp. oral taxon 014 str.
F0314]
Length = 112
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K F+ V R+ + +N PR+G V KK A RN M+R +
Sbjct: 10 RLLKTDDFSSVFALRNRRSRDLLQVSQSGDNGLNHPRLGLVVGKKAAKRANARNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++ R + HD+V+ R + + +++
Sbjct: 70 RDWFRRH--KEILPPHDFVVRVHRPFTRENAADAREQLAQLMKK 111
>gi|113869681|ref|YP_728170.1| ribonuclease P protein component [Ralstonia eutropha H16]
gi|113528457|emb|CAJ94802.1| Ribonuclease P protein component [Ralstonia eutropha H16]
Length = 184
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ P F L V N+ R+G V KK A ERN
Sbjct: 46 PKAARLTKTDEFSSVFALRPRRRSPHFVLYVRANDRPEG--RLGVVVGKKFAPRAAERNL 103
Query: 60 MRRRLKEAVR 69
++R +E R
Sbjct: 104 VKRMARELFR 113
>gi|255534241|ref|YP_003094612.1| Ribonuclease P protein component [Flavobacteriaceae bacterium
3519-10]
gi|255340437|gb|ACU06550.1| Ribonuclease P protein component [Flavobacteriaceae bacterium
3519-10]
Length = 72
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 43 VGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+G +V+KK AV+RNR++R L+E R
Sbjct: 1 MGVSVSKKYFKKAVDRNRIKRLLREMYRHN 30
>gi|219685113|ref|ZP_03539933.1| ribonuclease P protein component [Borrelia garinii Far04]
gi|219673209|gb|EED30228.1| ribonuclease P protein component [Borrelia garinii Far04]
Length = 111
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G L + +L++ +N+ + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRVRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
EA R + D + + ++L + + + + V
Sbjct: 68 EAFRKRLVLLEDRAVDIIFVVSYNSLNLTYFSIESLIKNLV 108
>gi|207109186|ref|ZP_03243348.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
HPKX_438_CA4C1]
Length = 77
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV+RN ++RRL+ A L G V + + D + F L HF+E +
Sbjct: 1 NAVKRNLIKRRLRSLTSKHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLEML 52
>gi|219684195|ref|ZP_03539139.1| ribonuclease P protein component [Borrelia garinii PBr]
gi|219672184|gb|EED29237.1| ribonuclease P protein component [Borrelia garinii PBr]
Length = 111
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G L + +L++ +N+ + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRVRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
EA R + D + + ++L + + + + V
Sbjct: 68 EAFRKRLVLLEGRAVDIIFVVSYNSLNLTYFSIESLIKNLV 108
>gi|299068434|emb|CBJ39658.1| Ribonuclease P protein component [Ralstonia solanacearum CMR15]
Length = 143
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 7 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 64
Query: 60 MRRRLKEAVRL 70
++R+ +E RL
Sbjct: 65 IKRQCRELFRL 75
>gi|313206817|ref|YP_004045994.1| ribonuclease p protein component [Riemerella anatipestifer DSM
15868]
gi|312446133|gb|ADQ82488.1| ribonuclease P protein component [Riemerella anatipestifer DSM
15868]
gi|315023890|gb|EFT36892.1| Ribonuclease P protein component [Riemerella anatipestifer RA-YM]
gi|325335743|gb|ADZ12017.1| ribonuclease P protein component [Riemerella anatipestifer RA-GD]
Length = 113
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 37 SNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAE 73
++G +V+K+ A +RNR++R L+E RL E
Sbjct: 38 DAEASKIGVSVSKRYFKKATDRNRVKRLLRECYRLNKE 75
>gi|281421502|ref|ZP_06252501.1| ribonuclease P protein component [Prevotella copri DSM 18205]
gi|281404574|gb|EFB35254.1| ribonuclease P protein component [Prevotella copri DSM 18205]
Length = 147
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
L V + +V +V+K+ AV+RNR++R+++EA R
Sbjct: 37 MRMVFLLVDKKDEQAPSVQVLISVSKRYFKHAVKRNRVKRQIREAFR 83
>gi|110636524|ref|YP_676731.1| RNase P protein subunit A [Cytophaga hutchinsonii ATCC 33406]
gi|110279205|gb|ABG57391.1| ribonuclease P protein component [Cytophaga hutchinsonii ATCC
33406]
Length = 138
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVL 76
K PF L + + + P+V +V+K+ AV+RNR++R ++EA RL +L
Sbjct: 37 SRFKYPFRILFLSADTYTEYFPQVLISVSKRNFKRAVDRNRIKRLIREAYRLQKNELL 94
>gi|215405981|ref|ZP_03418162.1| ribonuclease P [Mycobacterium tuberculosis 02_1987]
gi|215425185|ref|ZP_03423104.1| ribonuclease P [Mycobacterium tuberculosis T92]
gi|218755715|ref|ZP_03534511.1| ribonuclease P [Mycobacterium tuberculosis GM 1503]
gi|308406289|ref|ZP_07495838.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
gi|308363875|gb|EFP52726.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
Length = 99
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
S PRVG + K G AVER+R+ RRL+ + + H V+ A + +
Sbjct: 18 RGSGGGPRVGLIIAKSVGSAVERHRVARRLRHVAGSIVKELHPSDH-VVIRALPSSRHVS 76
Query: 95 FKELCNHFVERVRRN 109
L +RR
Sbjct: 77 SARLEQQLRCGLRRA 91
>gi|126662705|ref|ZP_01733704.1| RNase P protein, subunit A [Flavobacteria bacterium BAL38]
gi|126626084|gb|EAZ96773.1| RNase P protein, subunit A [Flavobacteria bacterium BAL38]
Length = 123
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
K P + V N + ++G +V+KK AV+RN +R L+E RL
Sbjct: 29 KFPLRLVYVENKEPNAEPIKMGVSVSKKYFKKAVDRNYFKRVLRETYRLN 78
>gi|311109682|ref|YP_003982535.1| ribonuclease P protein component [Achromobacter xylosoxidans A8]
gi|310764371|gb|ADP19820.1| ribonuclease P protein component [Achromobacter xylosoxidans A8]
Length = 123
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 7/106 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQG-CAV 55
+ L + +FA KG F + N+ + R+G + K+ A
Sbjct: 6 LPPEARLHRPSEFAAALKGRRLARGAFFIVSAAPNDLPPGQDACARLGLVIAKRFAAHAS 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RN ++R ++EA R + DYV+ L
Sbjct: 66 TRNAIKRVIREAFRH--RRLGLPAKDYVVRLHSKVAPATLTALKRA 109
>gi|193213719|ref|YP_001999672.1| ribonuclease P [Chlorobaculum parvum NCIB 8327]
gi|193087196|gb|ACF12472.1| ribonuclease P protein component [Chlorobaculum parvum NCIB 8327]
Length = 143
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 20 ELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
L+ GP + RV FTV KK AV+RNR++R ++EA RL
Sbjct: 31 RLKGGPLLMFYTCSRQGDRTGCTPVRVLFTVGKKLVPRAVDRNRIKRLMREAYRL 85
>gi|224531678|ref|ZP_03672310.1| ribonuclease P protein component [Borrelia valaisiana VS116]
gi|224511143|gb|EEF81549.1| ribonuclease P protein component [Borrelia valaisiana VS116]
Length = 111
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G L + +L++ +N + R+ T +K +V+RNR+RR K
Sbjct: 8 LKSKIEIQKIFKEGNLIRFSNLNLKMFCKSNDLIYSRLLVTFSKGFRGSVKRNRVRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLI 85
EA R E D + +
Sbjct: 68 EAFRKRLELSEGKAVDIIFV 87
>gi|320449655|ref|YP_004201751.1| ribonuclease P protein component [Thermus scotoductus SA-01]
gi|320149824|gb|ADW21202.1| ribonuclease P protein component [Thermus scotoductus SA-01]
Length = 64
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV RNR++ +R + ++IA +A + EL + +
Sbjct: 2 VSKKVGKAVVRNRIK----RRLREILRRLHLPRAHLLVIASPEAREATYAELFQDLIRAL 57
Query: 107 RRN 109
+++
Sbjct: 58 KKS 60
>gi|313204649|ref|YP_004043306.1| ribonuclease p protein component [Paludibacter propionicigenes WB4]
gi|312443965|gb|ADQ80321.1| ribonuclease P protein component [Paludibacter propionicigenes WB4]
Length = 144
Score = 41.7 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEA 67
KR + P + ++ + N + +V KK AV+RNR++R ++E+
Sbjct: 17 KRITKLFTRGDAFIAYPLRVVYLIESRNDVAAASIMVSVPKKRFKRAVKRNRLKRLMRES 76
Query: 68 VRLCAEGVLKHGHD---YVLIAKRDALF--IPFKELCNHFVERVRRNKRSYYSGKNFS 120
RL + +++ D + +A + F+ + + R K + S
Sbjct: 77 YRLNKQELIEALDDKQLQIHVAFNYVSDDVLDFEAVEKKMKIALERLKEKVINKDAVS 134
>gi|221214577|ref|ZP_03587547.1| ribonuclease P protein component [Burkholderia multivorans CGD1]
gi|221165467|gb|EED97943.1| ribonuclease P protein component [Burkholderia multivorans CGD1]
Length = 153
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGRP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLL 105
>gi|42527900|ref|NP_972998.1| ribonuclease P protein component [Treponema denticola ATCC 35405]
gi|41818945|gb|AAS12917.1| ribonuclease P protein component [Treponema denticola ATCC 35405]
Length = 118
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
S L+ R V +KG SL +L N R T + G AV RNR
Sbjct: 7 SGEERLRDRSCIKAVFQKGLKLSLNGVSLLILPNGLE--YNRFLCTFRRGFGSAVMRNRS 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIA--KRDALFIPFKELCNHFVER 105
RR KEA R + LK G+D +L+ ++D+ + ++L F++
Sbjct: 65 RRISKEAYR-HIKHRLKTGNDIILLVFSEKDSYSLRLEQLTALFLKA 110
>gi|293602693|ref|ZP_06685134.1| ribonuclease P protein component [Achromobacter piechaudii ATCC
43553]
gi|292818884|gb|EFF77924.1| ribonuclease P protein component [Achromobacter piechaudii ATCC
43553]
Length = 123
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQG-CAV 55
+ L + +FA KG + N+ + R+G + K+ A
Sbjct: 6 LPPEARLHRPSEFAAALKGRRLARGALFIVTSAPNDLPPGQDPCARLGLIIAKRFAAHAS 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
RN ++R ++EA R + DYV+ L
Sbjct: 66 TRNAIKRVIREAFRH--RRLALPAKDYVVRLHSKVAPASLTSLKR 108
>gi|167969461|ref|ZP_02551738.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|215413851|ref|ZP_03422516.1| ribonuclease P [Mycobacterium tuberculosis 94_M4241A]
gi|215432904|ref|ZP_03430823.1| ribonuclease P [Mycobacterium tuberculosis EAS054]
gi|215448270|ref|ZP_03435022.1| ribonuclease P [Mycobacterium tuberculosis T85]
gi|219555770|ref|ZP_03534846.1| ribonuclease P [Mycobacterium tuberculosis T17]
Length = 95
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
S PRVG + K G AVER+R+ RRL+ + + H V+ A + +
Sbjct: 14 RGSGGGPRVGLIIAKSVGSAVERHRVARRLRHVAGSIVKELHPSDH-VVIRALPSSRHVS 72
Query: 95 FKELCNHFVERVRRN 109
L +RR
Sbjct: 73 SARLEQQLRCGLRRA 87
>gi|116514956|ref|YP_802585.1| hypothetical protein BCc_006 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116256810|gb|ABJ90492.1| protein component of ribonuclease P [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 114
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ K F L L N N PR+ +++KK + +RNR++R ++E+ RL
Sbjct: 19 YFTCNKKNKIYTKNFVL--LANFNFLNFPRLSISISKKNIKKSHDRNRIKRIIRESFRLF 76
Query: 72 AEGV 75
+
Sbjct: 77 QNNL 80
>gi|291294535|ref|YP_003505933.1| ribonuclease P protein component [Meiothermus ruber DSM 1279]
gi|290469494|gb|ADD26913.1| ribonuclease P protein component [Meiothermus ruber DSM 1279]
Length = 110
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
LK + F ++ G + +G + ++ + RVG V+ K A RN++R
Sbjct: 6 LKGEKAFQRLRGGRVGRGKYLTVRWFPLRPTAFNPVRVGIVVSNKVSKKATVRNKIR--- 62
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + + V++A+ +A+ + +L ++++
Sbjct: 63 -RRLREILRKMHLPPCEMVVVAQPEAVEASYWDLLKDLTHALKKS 106
>gi|186682019|ref|YP_001865215.1| ribonuclease P [Nostoc punctiforme PCC 73102]
gi|238691258|sp|B2J0Q5|RNPA_NOSP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|186464471|gb|ACC80272.1| ribonuclease P protein component [Nostoc punctiforme PCC 73102]
Length = 140
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN----NNNSNLLP-------------- 41
+ LK R+ F V + G R G + +L L S
Sbjct: 3 LPKANRLKSRKDFQAVFREGIRRNGSYLTLRALKPLYSRKPSLDTATQTTQPIESVHISS 62
Query: 42 --RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KE 97
TK AV RNR++R++ A+ L G V I K A +
Sbjct: 63 IRIGISISTKVSKRAVVRNRIKRQITSALYSLLPR-LAPGWRLVFIVKPTAAESKCVSPQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAQAE 134
>gi|223937848|ref|ZP_03629748.1| ribonuclease P protein component [bacterium Ellin514]
gi|223893454|gb|EEF59915.1| ribonuclease P protein component [bacterium Ellin514]
Length = 124
Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ R F+ V++ R + R+G KK G AV R R RR L+
Sbjct: 16 RLKQSRDFSRVRQQGRRMPYGCLIANWMVLPPGSPMRLGVITAKKLGNAVVRARARRLLR 75
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
EA RL + + D VL+A+R + F + F+ +R+ +
Sbjct: 76 EAFRLHQHDLSQP-VDLVLVAQRTIVGKGFAAVEADFLAMLRKAR 119
>gi|255010301|ref|ZP_05282427.1| ribonuclease P [Bacteroides fragilis 3_1_12]
gi|313148100|ref|ZP_07810293.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136867|gb|EFR54227.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 126
Score = 41.7 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ + N + V +V+KK AV+RNR++R+L+EA RL +L+ D K
Sbjct: 35 VVYMPVENQDAQASVLLSVSKKRFKRAVKRNRVKRQLREAYRLHKHLLLQTLTD-----K 89
Query: 88 RDALFIPFKELCNHFV 103
+ L I F L +
Sbjct: 90 QQQLAIAFIYLSDELT 105
>gi|294660186|ref|NP_852790.2| ribonuclease P subunit [Mycoplasma gallisepticum str. R(low)]
gi|284811836|gb|AAP56358.2| ribonuclease P protein component [Mycoplasma gallisepticum str.
R(low)]
gi|284930250|gb|ADC30189.1| ribonuclease P protein component [Mycoplasma gallisepticum str.
R(high)]
Length = 116
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M LKK F LVK + + N ++G +V+KK AV RN
Sbjct: 1 MKRENSLKKITNFLELVKSKNKYYSNNYVIYAEKNR--ENKIKIGISVSKKLFAKAVIRN 58
Query: 59 RMRRRLK 65
+++R ++
Sbjct: 59 KIKREVR 65
>gi|317123174|ref|YP_004103177.1| ribonuclease P protein component [Thermaerobacter marianensis DSM
12885]
gi|315593154|gb|ADU52450.1| ribonuclease P protein component [Thermaerobacter marianensis DSM
12885]
Length = 191
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ RVGFTV ++ G AV RNR+RR L EA R A ++ G V++A+ A + +K
Sbjct: 89 PVTRVGFTVGRRLGKAVRRNRVRRLLAEAYRQLAPR-VEPGWWLVVVARDAAAGMDWKTA 147
Query: 99 CNHFVERVRRNKRSYYSGKNFSRKS 123
+ + + + R +
Sbjct: 148 RRALEDVLGKARLLRPPATGGLRDA 172
>gi|163845719|ref|YP_001633763.1| ribonuclease P protein component [Chloroflexus aurantiacus J-10-fl]
gi|222523424|ref|YP_002567894.1| ribonuclease P protein component [Chloroflexus sp. Y-400-fl]
gi|189043730|sp|A9WBG7|RNPA_CHLAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808059|sp|B9LGI0|RNPA_CHLSY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163667008|gb|ABY33374.1| ribonuclease P protein component [Chloroflexus aurantiacus J-10-fl]
gi|222447303|gb|ACM51569.1| ribonuclease P protein component [Chloroflexus sp. Y-400-fl]
Length = 135
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF V++ G P+ L V L R GF V+++ G AV+RNR
Sbjct: 1 MRRAYRLRRPEQFRRVRQEGRTFTSPWLILTVAPARRRTL--RCGFVVSRRVGGAVQRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRNK 110
RRR++EAVRL L G+D V + + + PF +L + +R+
Sbjct: 59 ARRRVREAVRLLLPR-LTAGYDMVFTIRTPEVIDAPFTQLQDDITALLRQAC 109
>gi|154148741|ref|YP_001406232.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(protein C5) [Campylobacter hominis ATCC BAA-381]
gi|153804750|gb|ABS51757.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Campylobacter hominis ATCC BAA-381]
Length = 69
Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
KK G AV RN RR +K + G +Y+ I K F ++ ++
Sbjct: 6 GKKIGNAVVRNHSRRVIKSIF-YNLRNEISCG-EYIFIVKSKISQTNFSQIEKSLKWALK 63
Query: 108 R 108
R
Sbjct: 64 R 64
>gi|189501793|ref|YP_001957510.1| hypothetical protein Aasi_0357 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497234|gb|ACE05781.1| hypothetical protein Aasi_0357 [Candidatus Amoebophilus asiaticus
5a2]
Length = 71
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD------YVLIAKRDALFIPFKELCNHF 102
KK AV+RN ++R++KEA RL L D YV I+ + F +
Sbjct: 4 KKVKHAVDRNAIKRKIKEAYRLN--KHLLPNSDTHFLLAYVYISSQQ--HCDFSTIQEQV 59
Query: 103 VERVRRNKR 111
++ + + R
Sbjct: 60 IKSINQLTR 68
>gi|86144135|ref|ZP_01062472.1| putative ribonuclease P protein component [Leeuwenhoekiella
blandensis MED217]
gi|85829397|gb|EAQ47862.1| putative ribonuclease P protein component [Leeuwenhoekiella
blandensis MED217]
Length = 131
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNN-NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
KK +K ++ P V + + + G +V K+ AV RNR++R ++
Sbjct: 14 KKILDKLFAEKNKISAYPLLLFYVETSLPEEEVQIQAGVSVAKRNHKLAVIRNRIKRLMR 73
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIP-FKELCNHFVERVRR 108
E R + Y + +P EL V+ + +
Sbjct: 74 EVYRKNKTQFQTNDKTYAFMFIYTGREVPVIDELEKAMVKLITK 117
>gi|37521044|ref|NP_924421.1| ribonuclease P protein component [Gloeobacter violaceus PCC 7421]
gi|35212040|dbj|BAC89416.1| ribonuclease P protein component [Gloeobacter violaceus PCC 7421]
Length = 108
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++ + L VL + R+G T ++K G AV RNR RR ++E++R L
Sbjct: 3 RRAKRYTSSHLQLLVLK--AAPAPTRIGITTSRKVGNAVRRNRYRRLIRESLRRVL-LKL 59
Query: 77 KHGHDYVLIAKR---DALFIPFKELCNHFVERV 106
G+ V++ + A + E+C +
Sbjct: 60 ASGYKIVIVVRPQPEGAFVPSYGEICEQVNRLL 92
>gi|221201817|ref|ZP_03574854.1| ribonuclease P protein component [Burkholderia multivorans CGD2M]
gi|221207677|ref|ZP_03580685.1| ribonuclease P protein component [Burkholderia multivorans CGD2]
gi|221172523|gb|EEE04962.1| ribonuclease P protein component [Burkholderia multivorans CGD2]
gi|221178237|gb|EEE10647.1| ribonuclease P protein component [Burkholderia multivorans CGD2M]
Length = 153
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLL 105
>gi|332883433|gb|EGK03716.1| ribonuclease P protein component [Dysgonomonas mossii DSM 22836]
Length = 142
Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
L +N N V +V KK AV+RNR++R ++EA RL
Sbjct: 41 RVVYLFSDEDNKENQYASVMISVAKKKFKRAVKRNRVKRLIREAYRLN 88
>gi|161526325|ref|YP_001581337.1| ribonuclease P protein component [Burkholderia multivorans ATCC
17616]
gi|160343754|gb|ABX16840.1| ribonuclease P protein component [Burkholderia multivorans ATCC
17616]
Length = 153
Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLL 105
>gi|51598695|ref|YP_072883.1| ribonuclease P protein component [Borrelia garinii PBi]
gi|60390345|sp|Q661I0|RNPA_BORGA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51573266|gb|AAU07291.1| ribonuclease P protein component [Borrelia garinii PBi]
Length = 111
Score = 41.3 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G L + +L++ +N+ + R+ T +K +V+RNR+RR KEA R E +
Sbjct: 19 KEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRVRRLFKEAFRKRLELLE 78
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERV 106
D + + + L + + + + V
Sbjct: 79 GRAVDIIFVVSYNRLNLTYFRIESLIKNLV 108
>gi|148241738|ref|YP_001226895.1| ribonuclease P protein component [Synechococcus sp. RCC307]
gi|166228257|sp|A5GRN3|RNPA_SYNR3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147850048|emb|CAK27542.1| Ribonuclease P protein component [Synechococcus sp. RCC307]
Length = 127
Score = 41.3 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 13/121 (10%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNS---------NLLPRVGFTVTKK 50
+ L+ R F + ++G+ + L V + + R G ++ K
Sbjct: 3 LPQRHRLRGRGVFDYIYQRGQRFQQGLLQLRVADAATNLLREPPETLEGELRFGVVISSK 62
Query: 51 QGC-AVERNRMRRRLKEAV-RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV+RNR+RR L EA R L +L + A+ + L + ++R
Sbjct: 63 VSKRAVKRNRLRRLLHEAFLRQTFRSDLPPTW-LLLNLRPGAVELSDDNLLEEWSTLIQR 121
Query: 109 N 109
Sbjct: 122 A 122
>gi|303256372|ref|ZP_07342386.1| ribonuclease P protein component [Burkholderiales bacterium
1_1_47]
gi|331001502|ref|ZP_08325120.1| ribonuclease P protein component domain protein [Parasutterella
excrementihominis YIT 11859]
gi|302859863|gb|EFL82940.1| ribonuclease P protein component [Burkholderiales bacterium
1_1_47]
gi|329568231|gb|EGG50048.1| ribonuclease P protein component domain protein [Parasutterella
excrementihominis YIT 11859]
Length = 151
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 2 SNICILKKRRQFALVKKGE-----LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AV 55
+KK + F V K G +F L+ + + R G TV K +V
Sbjct: 11 PQKAKIKKSQDFLTVLKARGKGVVRLSGQWFELKAVL-TQGKVSSRFGLTVGKHFSKRSV 69
Query: 56 ERNRMRRRLKEAVR 69
+RN ++R L+EA+R
Sbjct: 70 DRNLVKRILREAIR 83
>gi|225025480|ref|ZP_03714672.1| hypothetical protein EIKCOROL_02380 [Eikenella corrodens ATCC
23834]
gi|224941764|gb|EEG22973.1| hypothetical protein EIKCOROL_02380 [Eikenella corrodens ATCC
23834]
Length = 113
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRL 64
L K F+ V K +++ + N PR+G V KK A RN M+R L
Sbjct: 10 RLLKTDDFSSVFALRRLKSRP-DIQLWHKPNGLGHPRLGLVVAKKTARRANRRNYMKRTL 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E RL + D V+ +R +++ + V +
Sbjct: 69 REWFRLNRHRL--DSSDLVVRVRRPFGKAGRQQVLAQLEQIVPKK 111
>gi|329118141|ref|ZP_08246853.1| ribonuclease P protein component [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465801|gb|EGF12074.1| ribonuclease P protein component [Neisseria bacilliformis ATCC
BAA-1200]
Length = 117
Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 3/109 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRL 64
L K +F+ V ++ + N R+G V KK A ERN M+R +
Sbjct: 9 RLLKTEEFSSVFALRKQRRGELLQISYSAANPCGHARLGLVVAKKTARRAHERNYMKRVI 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++ R + D+V+ + + ++
Sbjct: 69 RDWFRRHKNTL--PPFDFVVRVRCAFECADAPAARAELSRLLAAVAQTE 115
>gi|238028971|ref|YP_002913202.1| ribonuclease P protein component [Burkholderia glumae BGR1]
gi|237878165|gb|ACR30498.1| Ribonuclease P protein component [Burkholderia glumae BGR1]
Length = 157
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G V KKQ AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRSAHFVVYGKPTGGD---ARLGLVVGKKQAPRAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA RL G D +L
Sbjct: 84 VKRLAREAFRLRRAEFA--GWDILL 106
>gi|305665834|ref|YP_003862121.1| ribonuclease P [Maribacter sp. HTCC2170]
gi|88710605|gb|EAR02837.1| ribonuclease P [Maribacter sp. HTCC2170]
Length = 123
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
P + + N + G V KK AV+RNR++R L+E+ RL
Sbjct: 29 PIKLIYLKIEEPMNARFKAGMAVPKKNFKSAVKRNRIKRLLRESYRLN 76
>gi|227538311|ref|ZP_03968360.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33300]
gi|227241826|gb|EEI91841.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33300]
Length = 135
Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVR----LCAEGVLKHGHDYVLIAKRDA--LFIPFKE 97
+V+K+ AV RN ++RR++EA R L+ H +LIA + + F+E
Sbjct: 51 ISVSKRRYKKAVTRNLLKRRMREAYRTQKKEILYSFLEDHHLNLLIAIQYVGKTELSFEE 110
Query: 98 LCNHFVERVRRNK 110
+ + + K
Sbjct: 111 MKVKLALALNKLK 123
>gi|326573506|gb|EGE23472.1| ribonuclease P protein component [Moraxella catarrhalis O35E]
Length = 87
Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 37 SNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
L R+G +TKK AV+RNR++R +E R + D V+I K
Sbjct: 8 QGLSARLGLAITKKKLKKAVDRNRLKRLCRENFRHRQASWVA--IDVVVIVKAG 59
>gi|224534811|ref|ZP_03675383.1| ribonuclease P protein component [Borrelia spielmanii A14S]
gi|224514059|gb|EEF84381.1| ribonuclease P protein component [Borrelia spielmanii A14S]
Length = 111
Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK + + + K G L + +L++ +N + R+ T +K +V+RN +RR K
Sbjct: 8 LKSKIEIQKIFKEGNLIRFSSLNLKMFYKSNHLIYSRILVTFSKSFRGSVKRNLVRRLFK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
EA R E + D + + + L + + + + V
Sbjct: 68 EAFRKRLELLEGRAIDIIFVVYYNRLDLTYFNIESLMKSLV 108
>gi|332968626|gb|EGK07680.1| ribonuclease P protein component [Kingella kingae ATCC 23330]
Length = 113
Score = 40.6 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K +F+ V ++ + + +N R+G V KK A RN M+R +
Sbjct: 10 RLLKTAEFSAVFALRKQRSRSLIQVLQSADNRLGYARLGLVVGKKAAKRANRRNYMKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAK 87
+E RL + D+V+ +
Sbjct: 70 REWFRLHKSTLPPQ--DFVVRVR 90
>gi|261856986|ref|YP_003264269.1| ribonuclease P [Halothiobacillus neapolitanus c2]
gi|261837455|gb|ACX97222.1| ribonuclease P protein component [Halothiobacillus neapolitanus c2]
Length = 123
Score = 40.6 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
L++ ++ R + V+ N PR+G + K+ A ERNR++R
Sbjct: 14 VRLRRPDEYKRTLTSGKRVHCELLMAVVT-PNQGANPRLGLAIAKRQTRLAHERNRVKRI 72
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ R D V++AK + EL + +
Sbjct: 73 ARDHFRRHQAQW--PSFDCVIMAKAGIEKVSNPELQIMMKQLFEKVAAR 119
>gi|262278045|ref|ZP_06055832.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [alpha proteobacterium HIMB114]
gi|262223792|gb|EEY74257.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [alpha proteobacterium HIMB114]
Length = 108
Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV--TKKQGCAVERNRMRRRLKEAV 68
+F V G+ F++ + N+ + + + KK G AV RNRMRRRLK A
Sbjct: 5 SEFKEVLSGKKISSNLFTIFYKSKNSKDKKLAIQLSCVAAKKLGNAVRRNRMRRRLKMAT 64
Query: 69 R---LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R L + Y + A+ F+ + + ++ +
Sbjct: 65 RKAILEIGSKFEKKFKYAIFARPKIYDEEFQNIVDDLSSKLGK 107
>gi|261416140|ref|YP_003249823.1| hypothetical protein Fisuc_1748 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372596|gb|ACX75341.1| hypothetical protein Fisuc_1748 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327503|gb|ADL26704.1| putative ribonuclease p protein component [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 89
Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
+ R F KK G AV RN+ RR L+ + K +++
Sbjct: 7 PDGFCRFCFLAKKKNGNAVYRNKCRRILRPLFYGIVPNIKKPVWAMIIV 55
>gi|284038781|ref|YP_003388711.1| hypothetical protein Slin_3922 [Spirosoma linguale DSM 74]
gi|283818074|gb|ADB39912.1| hypothetical protein Slin_3922 [Spirosoma linguale DSM 74]
Length = 126
Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF- 92
++ LLP + TV K+ AV+RN+++RR++EA RL + G IA
Sbjct: 49 DSEPLLPAIVITVPKRIFKRAVDRNQIKRRVREAYRLNKALFSQTGTPPATIAFLYTAKQ 108
Query: 93 -IPFKELCNHFVERVRRN 109
I F+E+ +++
Sbjct: 109 IISFEEIEKGMKLALKKM 126
>gi|73543144|ref|YP_297664.1| ribonuclease P protein component [Ralstonia eutropha JMP134]
gi|72120557|gb|AAZ62820.1| ribonuclease P protein component [Ralstonia eutropha JMP134]
Length = 166
Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N + R+G V KK A ERN
Sbjct: 24 PKAARLTKTDEFSSVFALRPRRRSTHFVLYVRANGRAE--ARLGVVVGKKFAPRAAERNL 81
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +E R + + G D +L
Sbjct: 82 VKRMARELFRQRQDQLG--GRDVLL 104
>gi|315605510|ref|ZP_07880547.1| ribonuclease P protein component [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312777|gb|EFU60857.1| ribonuclease P protein component [Actinomyces sp. oral taxon 180
str. F0310]
Length = 117
Score = 40.6 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
F + R G + + + VGF V K+ A RNR++R+L+ +R
Sbjct: 12 ADFTAAIRHGARAGDPLVVVHVRADEERNSRLVGFVVPKREIKRANGRNRVKRQLRHLMR 71
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ L G V+ A +L + KEL H + + R
Sbjct: 72 ERIDN-LPEGSRVVVRASGRSLGVSSKELGAHLDRVMSKAWRK 113
>gi|53711356|ref|YP_097348.1| ribonuclease P [Bacteroides fragilis YCH46]
gi|60679672|ref|YP_209816.1| ribonuclease P [Bacteroides fragilis NCTC 9343]
gi|253564538|ref|ZP_04841995.1| ribonuclease P [Bacteroides sp. 3_2_5]
gi|265764801|ref|ZP_06093076.1| ribonuclease P [Bacteroides sp. 2_1_16]
gi|52214221|dbj|BAD46814.1| putative ribonuclease P protein component [Bacteroides fragilis
YCH46]
gi|60491106|emb|CAH05854.1| possible ribonuclease P component [Bacteroides fragilis NCTC 9343]
gi|251948314|gb|EES88596.1| ribonuclease P [Bacteroides sp. 3_2_5]
gi|263254185|gb|EEZ25619.1| ribonuclease P [Bacteroides sp. 2_1_16]
gi|301161137|emb|CBW20675.1| possible ribonuclease P component [Bacteroides fragilis 638R]
Length = 107
Score = 40.6 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ + N ++ + +V+KK AV+RNR++R+L+EA R+ +L+ +L K
Sbjct: 16 VVYMPVENQDVQASILLSVSKKRFKRAVKRNRVKRQLREAYRMHKHQLLQ-----ILTDK 70
Query: 88 RDALFIPFKELCNHFV 103
+ L I F L +
Sbjct: 71 QQQLAIAFIYLSDELT 86
>gi|213026873|ref|ZP_03341320.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 57
Score = 40.6 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
NR++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 1 NRIKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 52
>gi|203284350|ref|YP_002222090.1| ribonuclease P protein component [Borrelia duttonii Ly]
gi|203287884|ref|YP_002222899.1| ribonuclease P protein component [Borrelia recurrentis A1]
gi|254808049|sp|B5RLZ8|RNPA_BORDL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808052|sp|B5RRP4|RNPA_BORRA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|201083793|gb|ACH93384.1| ribonuclease P protein component [Borrelia duttonii Ly]
gi|201085104|gb|ACH94678.1| ribonuclease P protein component [Borrelia recurrentis A1]
Length = 114
Score = 40.6 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ + S + R+ T + AV+RNR+RR KE R + D++ +
Sbjct: 29 INIFYRFTSLAISRILITFPRVFKGAVKRNRVRRVFKECFREYFTLLKDGCADFIFVVYP 88
Query: 89 DALFIPFKELCNHFVERV 106
I + E+ +
Sbjct: 89 QKANINYHEVKTILKNMI 106
>gi|88802011|ref|ZP_01117539.1| ribonuclease P [Polaribacter irgensii 23-P]
gi|88782669|gb|EAR13846.1| ribonuclease P [Polaribacter irgensii 23-P]
Length = 132
Score = 40.6 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKE 66
KK + + ++ P + + + S ++G +V K+ AV+RNR++R ++E
Sbjct: 14 KKLIEKLYAEGSSVKSFPLRMMFIQTTHTSKFPCQIGVSVAKRNYKLAVDRNRLKRLMRE 73
Query: 67 AVRLCAE---GVLKHGHDYVL--IAKRDA----LFIPFKELCNHFVERVRRN 109
RL E L+ + +++ I + + L++ ++L N F+ +++
Sbjct: 74 TYRLQKEIVYNNLEEPYVFMISYIGREEIKYEELYLKMEKLLNIFIAAIKKT 125
>gi|300774239|ref|ZP_07084106.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33861]
gi|300758918|gb|EFK55747.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33861]
Length = 135
Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVR----LCAEGVLKHGHDYVLIAKRDA--LFIPFKE 97
+V+K+ AV RN ++RR++EA R L+ H +LIA + + F E
Sbjct: 51 ISVSKRRYKKAVTRNLLKRRMREAYRTQKKEILYSFLEDHHLNLLIAIQYVGKTELSFAE 110
Query: 98 LCNHFVERVRRNK 110
+ + + K
Sbjct: 111 MKVKLALALNKLK 123
>gi|119358506|ref|YP_913150.1| ribonuclease P [Chlorobium phaeobacteroides DSM 266]
gi|254808058|sp|A1BJZ9|RNPA_CHLPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119355855|gb|ABL66726.1| ribonuclease P protein component [Chlorobium phaeobacteroides DSM
266]
Length = 146
Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 19 GELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
G+ KG + L + + +V F V+KK AV RNR++R ++EA R
Sbjct: 33 GKSCKGEYLKLFYQKTVSDVKSRSPAVQVLFAVSKKNVPHAVSRNRLKRLMREAYR 88
>gi|194291289|ref|YP_002007196.1| ribonuclease p protein component (rnasep protein) (rnase p
protein) (protein c5) [Cupriavidus taiwanensis LMG
19424]
gi|193225124|emb|CAQ71135.1| Ribonuclease P protein component (RNaseP protein) (RNase P
protein) (Protein C5) [Cupriavidus taiwanensis LMG
19424]
Length = 157
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N+ R+G V KK A ERN
Sbjct: 10 PKAARLTKTDEFSSVFALRPRRRSTHFVLYVRPNDRPEG--RLGVVVGKKFAPRAAERNL 67
Query: 60 MRRRLKEAVR 69
++R +E R
Sbjct: 68 VKRMARELFR 77
>gi|307731538|ref|YP_003908762.1| ribonuclease P protein component [Burkholderia sp. CCGE1003]
gi|307586073|gb|ADN59471.1| ribonuclease P protein component [Burkholderia sp. CCGE1003]
Length = 188
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 47/136 (34%), Gaps = 19/136 (13%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 57 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 113
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKELCNHFVERV----R 107
+RR +EA R+ G D +L A A P K LC +E +
Sbjct: 114 VRRIAREAFRVRRAEFG--GWDVLLRLHTRFDRKALPSASSPPLKALCRSEIEALLDKAA 171
Query: 108 RNKRSYYSGKNFSRKS 123
R + + K+
Sbjct: 172 REIARRQAPPAQAPKT 187
>gi|226942150|ref|YP_002797224.1| ribonuclease P [Laribacter hongkongensis HLHK9]
gi|226717077|gb|ACO76215.1| RnpA [Laribacter hongkongensis HLHK9]
Length = 120
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 4/111 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
+ K +F+ V + + + +V N R+G V+KK A RN M+R +
Sbjct: 10 RILKTDEFSSVFRLRRVRSNAWF-QVYVAPNQLGHARLGLVVSKKTAKRANRRNYMKRVI 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++ R + V G D+V+ + E R S
Sbjct: 69 RDTFRQHPDRVA--GVDFVVRVRAPFDRAGRPEAVEALRALFARLSSCRVS 117
>gi|291615451|ref|YP_003525608.1| ribonuclease P protein component [Sideroxydans lithotrophicus
ES-1]
gi|291585563|gb|ADE13221.1| ribonuclease P protein component [Sideroxydans lithotrophicus
ES-1]
Length = 121
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ L +++ F + + + R +F++ N + R+G +V+K+ A +RN+
Sbjct: 11 LPRSFRLSRQQGFTRILQVKARTNSWFAVHTKANVSG--HARLGISVSKRVLPAATQRNK 68
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
++R ++E R A L + D V+ ++ +
Sbjct: 69 VKRLIRECFRRNARCGLTN--DVVIRLRKPLVD 99
>gi|225012545|ref|ZP_03702981.1| ribonuclease P protein component [Flavobacteria bacterium MS024-2A]
gi|225003522|gb|EEG41496.1| ribonuclease P protein component [Flavobacteria bacterium MS024-2A]
Length = 119
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 43 VGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG-HDYVLIAKRDALFIPFKELCN 100
VG +V+K+ AV+RNR++R+L+E +R +G + K+ + + KE +
Sbjct: 49 VGVSVSKRNFKKAVDRNRIKRQLREGLREADSQNFFYGNCMLIFTGKKASETMVLKEEIS 108
Query: 101 HFVERVR 107
+++
Sbjct: 109 ALFNKMK 115
>gi|124010240|ref|ZP_01694895.1| ribonuclease P protein component [Microscilla marina ATCC 23134]
gi|123983732|gb|EAY24164.1| ribonuclease P protein component [Microscilla marina ATCC 23134]
Length = 122
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDY- 82
P +L+ SN P+V FTV K+ AV+RN ++R LKEA RL + Y
Sbjct: 31 PIKVKYILHPTPSNTPPQVLFTVPKRTFKRAVDRNAIKRLLKEAYRLNKHLLHDEAGSYK 90
Query: 83 ------VLIAKRDALFIPFKELCNHFVERVRRNK 110
V IAK +PF + + R K
Sbjct: 91 IAYIAFVYIAKEK---LPFDTIERKTISVFERLK 121
>gi|187479883|ref|YP_787908.1| ribonuclease P [Bordetella avium 197N]
gi|123513534|sp|Q2KTI7|RNPA_BORA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115424470|emb|CAJ51024.1| ribonuclease P protein component [Bordetella avium 197N]
Length = 120
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
+ L + +F KG +G F + ++ R+G + K+ A RN
Sbjct: 6 LPAEARLHRPSEFTAALKGRRLARGALFIVSAAPATSAPACARLGLVIAKRYAALATTRN 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
++R L+EA R DYV+ + L
Sbjct: 66 AIKRVLREAFRH--RRQALPAQDYVIRLHSKVGPLSLTALKRA 106
>gi|163859334|ref|YP_001633632.1| ribonuclease P [Bordetella petrii DSM 12804]
gi|254808051|sp|A9IJC1|RNPA_BORPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163263062|emb|CAP45365.1| ribonuclease P protein component [Bordetella petrii]
Length = 123
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL----PRVGFTVTKKQG-CAV 55
+ L + +FA KG F + ++ R+G + K+ A
Sbjct: 6 LPPEARLHRPSEFAAALKGRRLARGAFFILSAAPSSPPPGQAAQARLGMVIAKRYAAHAS 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
RN ++R ++EA R C + DYVL
Sbjct: 66 TRNALKRVIREAFRHCRLELPPQ--DYVL 92
>gi|254431546|ref|ZP_05045249.1| ribonuclease P protein component [Cyanobium sp. PCC 7001]
gi|197625999|gb|EDY38558.1| ribonuclease P protein component [Cyanobium sp. PCC 7001]
Length = 127
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 12/121 (9%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLN----------NNNSNLLPRVGFTVTK 49
+ LK +R F +L +KG GPF L + + R G ++
Sbjct: 3 LPQRHRLKGQRVFDSLYRKGRPMNGPFLMLRWQPARAELLPPEQRRHGSSPWRCGVVIST 62
Query: 50 KQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K +V+RNR+RR L + +R G + +L + L E ++R
Sbjct: 63 KVHKRSVQRNRLRRLLHQHLRQQPIGREEGPVWLLLSLRPGCAERSSDALLEECQELLQR 122
Query: 109 N 109
Sbjct: 123 A 123
>gi|117929367|ref|YP_873918.1| ribonuclease P protein component [Acidothermus cellulolyticus
11B]
gi|166226695|sp|A0LWX2|RNPA_ACIC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|117649830|gb|ABK53932.1| ribonuclease P protein component [Acidothermus cellulolyticus
11B]
Length = 120
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE 56
+ + L++ F V ++G G + + + ++ P+ GF V + G AV
Sbjct: 2 LPSRYRLRRSSDFKAVLRRGRRVAGRYIVVYLSTSDTDRPGPQAGFVVGRNVGGAVV 58
>gi|257455163|ref|ZP_05620401.1| ribonuclease P protein component [Enhydrobacter aerosaccus SK60]
gi|257447496|gb|EEV22501.1| ribonuclease P protein component [Enhydrobacter aerosaccus SK60]
Length = 145
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ + ++ + R+G +TKK A ERN ++R +E RL + D +L K
Sbjct: 55 VVLADSQRQAAVNRLGLAITKKKVKRAHERNHIKRLTREYFRLHQHQLNAQ-VDILLTIK 113
Query: 88 RDALFIPFKELCNHFV 103
+ + + + +
Sbjct: 114 QFSDDMQNQAIVQQLA 129
>gi|189348960|ref|YP_001944588.1| ribonuclease P [Burkholderia multivorans ATCC 17616]
gi|56798244|dbj|BAD82887.1| ribonuclease P protein component [Burkholderia multivorans]
gi|189332982|dbj|BAG42052.1| ribonuclease P [Burkholderia multivorans ATCC 17616]
Length = 135
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G+D +L
Sbjct: 65 VKRLAREAFRVRRAEFA--GYDLLL 87
>gi|237749312|ref|ZP_04579792.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13]
gi|229380674|gb|EEO30765.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13]
Length = 125
Score = 39.8 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
S+ + K F+ V + + F + N + R+G V K+ AV RN
Sbjct: 6 SSDRRIVKTDDFSSVFRMRPRARTKHFVMYARPNQLES--ARLGIVVAKRFAHRAVTRNT 63
Query: 60 MRRRLKEAVRLCAEGVL 76
++R +E R +
Sbjct: 64 IKRLCRETFRCIQIPAM 80
>gi|78189985|ref|YP_380323.1| ribonuclease P [Chlorobium chlorochromatii CaD3]
gi|78172184|gb|ABB29280.1| ribonuclease P protein component, putative [Chlorobium
chlorochromatii CaD3]
Length = 85
Score = 39.8 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRL 70
F V+KK AV+RNR++R ++EA RL
Sbjct: 2 FVVSKKNVRHAVKRNRIKRLMREAYRL 28
>gi|146298731|ref|YP_001193322.1| ribonuclease P protein component [Flavobacterium johnsoniae
UW101]
gi|146153149|gb|ABQ04003.1| ribonuclease P protein component [Flavobacterium johnsoniae
UW101]
Length = 132
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
P + +VG +V+KK AV+RN +R L+E RL
Sbjct: 31 PLRLVYRQAEEAYQGNTKVGVSVSKKYFKKAVDRNYFKRVLRETYRLN 78
>gi|312131874|ref|YP_003999214.1| ribonuclease p protein component [Leadbetterella byssophila DSM
17132]
gi|311908420|gb|ADQ18861.1| ribonuclease P protein component [Leadbetterella byssophila DSM
17132]
Length = 119
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+ +++ P++ TV+K+ AV+RN ++R+++EA R+
Sbjct: 36 VIYRESSSEEPQYPQILITVSKRNFKKAVDRNHIKRQIREAYRM 79
>gi|323527921|ref|YP_004230074.1| ribonuclease P protein component [Burkholderia sp. CCGE1001]
gi|323384923|gb|ADX57014.1| ribonuclease P protein component [Burkholderia sp. CCGE1001]
Length = 183
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 52 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 108
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
+RR +EA RL G D +L
Sbjct: 109 VRRIAREAFRLRRAEFG--GWDVLL 131
>gi|158319057|ref|YP_001511565.1| ribonuclease P protein component [Frankia sp. EAN1pec]
gi|238686849|sp|A8L8W2|RNPA_FRASN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158114462|gb|ABW16659.1| ribonuclease P protein component [Frankia sp. EAN1pec]
Length = 121
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ R++ ALV + R + + + PR GF V ++ G AV RNR+
Sbjct: 2 LPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRL+E R L G ++ A DA +L R + S
Sbjct: 62 RRRLREQTRSRLSS-LPPGTAVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARS 120
>gi|145597101|ref|YP_001161398.1| ribonuclease P protein component [Salinispora tropica CNB-440]
gi|189043745|sp|A4XDK4|RNPA_SALTO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145306438|gb|ABP57020.1| ribonuclease P protein component [Salinispora tropica CNB-440]
Length = 136
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++ R GF V+K G AV RN RR + L G V+ A A
Sbjct: 54 EQTSAPARAGFVVSKAVGNAVVRN-AVRRRLRHLVRERLPGLPAGSTLVVRALPTAAHRS 112
Query: 95 FKELCNHF 102
++ L
Sbjct: 113 YQRLGVDL 120
>gi|332286193|ref|YP_004418104.1| ribonuclease P [Pusillimonas sp. T7-7]
gi|330430146|gb|AEC21480.1| ribonuclease P [Pusillimonas sp. T7-7]
Length = 152
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 11/119 (9%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQG-CAVE 56
L + ++AL KG + +++ R+G + K+ +V
Sbjct: 36 PAAARLHRPSEYALALKGRRLARGALFVVTTPREGASDSAAPDARLGLIIAKRFAPQSVT 95
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKR 111
RN ++R ++EA R + D V + K++ + + + R R
Sbjct: 96 RNAIKRVIREAFR--NKRHELPARDLVFRLHSRVDPVSLTLLKKQVRDEVDQLLDRAMR 152
>gi|282880555|ref|ZP_06289262.1| ribonuclease P protein component [Prevotella timonensis CRIS
5C-B1]
gi|281305658|gb|EFA97711.1| ribonuclease P protein component [Prevotella timonensis CRIS
5C-B1]
Length = 136
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 25 PFFSLEVLNNNNSNLLP-RVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKH 78
P + +L N + +P ++ +V+K+ AV+RNR++R+++EA RL + + +
Sbjct: 37 PLRVVYLLTENEAQDVPVKMMVSVSKRHFKQAVKRNRVKRQVREAYRLQKQLITEP 92
>gi|52843197|ref|YP_096996.1| ribonuclease P protein component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630308|gb|AAU29049.1| ribonuclease P protein component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 62
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
A +RNR++R L+E+ R D +++A+ + + +
Sbjct: 2 IAKAHDRNRIKRLLRESFRHTN----LPAVDIIILARPGLAKKTNLGINTKLNKTWEKLA 57
Query: 111 R 111
Sbjct: 58 S 58
>gi|333029510|ref|ZP_08457571.1| Ribonuclease P protein component [Bacteroides coprosuis DSM
18011]
gi|332740107|gb|EGJ70589.1| Ribonuclease P protein component [Bacteroides coprosuis DSM
18011]
Length = 129
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 46 TVTKK-QGCAVERNRMRRRLKEAVRLC 71
+V+KK AV+RNR++R L+E+ R
Sbjct: 54 SVSKKRHKHAVDRNRVKRLLRESFRTN 80
>gi|17544721|ref|NP_518123.1| ribonuclease P protein component [Ralstonia solanacearum GMI1000]
gi|17427010|emb|CAD13530.1| probable ribonuclease p protein component [Ralstonia solanacearum
GMI1000]
Length = 131
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRL 70
R+ F L V N + R+G + KK AVERN ++R+ +E RL
Sbjct: 16 RRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNLIKRQCRELFRL 63
>gi|298207210|ref|YP_003715389.1| possible ribonuclease P component [Croceibacter atlanticus
HTCC2559]
gi|83849846|gb|EAP87714.1| possible ribonuclease P component [Croceibacter atlanticus
HTCC2559]
Length = 123
Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
+ +N +VG +V K+ AV RNR++R L+E+ R
Sbjct: 36 YIPLKDNDVKGFKVGVSVPKRNFKLAVHRNRIKRLLRESFRKN 78
>gi|332519440|ref|ZP_08395907.1| ribonuclease P protein component [Lacinutrix algicola 5H-3-7-4]
gi|332045288|gb|EGI81481.1| ribonuclease P protein component [Lacinutrix algicola 5H-3-7-4]
Length = 123
Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
KG+ L L N +VG +V+K+ AV+R R++R L+EA RL
Sbjct: 23 KGKSVSAWPLRLVYLKN---EKTNKVGVSVSKRNFKLAVDRIRIKRLLREAYRLN 74
>gi|194337888|ref|YP_002019682.1| ribonuclease P [Pelodictyon phaeoclathratiforme BU-1]
gi|194310365|gb|ACF45065.1| ribonuclease P [Pelodictyon phaeoclathratiforme BU-1]
Length = 136
Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 14 ALVKKGELRKGPFFSLEV----LNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAV 68
L K G+ KG F + L+N P + F V+KK AV RN+++R ++EA
Sbjct: 21 LLFKNGKSVKGDFLRIVYASLQLDNACFQPFPSILFAVSKKTVHSAVGRNKIKRMMREAY 80
Query: 69 R 69
R
Sbjct: 81 R 81
>gi|303236118|ref|ZP_07322720.1| ribonuclease P protein component [Prevotella disiens FB035-09AN]
gi|302483700|gb|EFL46693.1| ribonuclease P protein component [Prevotella disiens FB035-09AN]
Length = 163
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
+ E N + N ++ +V KK AV+RNR +R+++EA R
Sbjct: 59 YLVQEKENKTDENPQIKILISVPKKHFKRAVKRNRAKRQIREAYRKN 105
>gi|325969855|ref|YP_004246046.1| ribonuclease P protein component [Spirochaeta sp. Buddy]
gi|324025093|gb|ADY11852.1| Ribonuclease P protein component [Spirochaeta sp. Buddy]
Length = 116
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S I+K++ + V K G+ L V N + R+ + G AV+RNR
Sbjct: 5 LSKKEIVKRKPEIDRVFKTGKTYACLGLKLIVSQNQLD--VDRIVVIPVRHYGSAVQRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
+RR++KE R + + G+D+ I
Sbjct: 63 IRRQIKEIWR-NEKPRMVPGYDFAFI 87
>gi|251772741|gb|EES53303.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
Length = 89
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G F L N+++ R+ V KK G AV RNR+RRRL+EA RL
Sbjct: 19 GIKVVSSSFVLLCQNSSD----YRLSVLVGKKIGKAVFRNRVRRRLREAYRLT--DGFPP 72
Query: 79 GHDYVLIAKRDALFIPFK 96
G+ YV++ + AL F
Sbjct: 73 GY-YVIMGRNPALTTSFD 89
>gi|150026406|ref|YP_001297232.1| ribonuclease P protein component [Flavobacterium psychrophilum
JIP02/86]
gi|149772947|emb|CAL44431.1| Ribonuclease P protein component [Flavobacterium psychrophilum
JIP02/86]
Length = 131
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 37 SNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKH 78
++G +V+KK AV+RN +R L+E RL +L++
Sbjct: 43 EEEQIKMGVSVSKKYFKKAVDRNYFKRVLRETYRLNKHLLLEN 85
>gi|237810281|ref|YP_002894732.1| ribonuclease P [Burkholderia pseudomallei MSHR346]
gi|237505083|gb|ACQ97401.1| ribonuclease P [Burkholderia pseudomallei MSHR346]
Length = 155
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRD---ARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G D +L
Sbjct: 84 VKRLAREAFRMRRAEFA--GWDILL 106
>gi|134297401|ref|YP_001121136.1| ribonuclease P protein component [Burkholderia vietnamiensis G4]
gi|134140558|gb|ABO56301.1| ribonuclease P protein component [Burkholderia vietnamiensis G4]
Length = 153
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLL 105
>gi|83721327|ref|YP_443731.1| ribonuclease P protein component [Burkholderia thailandensis E264]
gi|83655152|gb|ABC39215.1| ribonuclease P protein component [Burkholderia thailandensis E264]
Length = 155
Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRE---ARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R G D +L
Sbjct: 84 VKRLAREAFRTRRAEFA--GWDILL 106
>gi|170694071|ref|ZP_02885227.1| ribonuclease P protein component [Burkholderia graminis C4D1M]
gi|170141143|gb|EDT09315.1| ribonuclease P protein component [Burkholderia graminis C4D1M]
Length = 165
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 43/135 (31%), Gaps = 20/135 (14%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 34 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 90
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKELCNH-----FVERV 106
+RR +EA RL G D +L A A P K LC +
Sbjct: 91 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSAASPPLKALCRSEIEALLDKAA 148
Query: 107 RRNKRSYYSGKNFSR 121
R R R
Sbjct: 149 REITRRQAPPAEAPR 163
>gi|260654887|ref|ZP_05860375.1| ribonuclease P protein component [Jonquetella anthropi E3_33 E1]
gi|260630389|gb|EEX48583.1| ribonuclease P protein component [Jonquetella anthropi E3_33 E1]
Length = 131
Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+K +F V + + R +L + R G V K+ A R R
Sbjct: 12 PKEIRLRKSWEFDTVFRTKGRLRGQLV-RLLYVQAPDGKTRWGLAVGKRLAKANGRVHGR 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
R L+EA+R ++ G V L P
Sbjct: 71 RLLREAIRRLHP-WVRQGLWIVASLSETGLTAP 102
>gi|289810513|ref|ZP_06541142.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 57
Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+ +L NS PR+G TV KK A ERNR++R +E+ RL
Sbjct: 12 ITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRL 54
>gi|218131654|ref|ZP_03460458.1| hypothetical protein BACEGG_03275 [Bacteroides eggerthii DSM 20697]
gi|317474723|ref|ZP_07933997.1| component ribonuclease P protein [Bacteroides eggerthii 1_2_48FAA]
gi|217985957|gb|EEC52296.1| hypothetical protein BACEGG_03275 [Bacteroides eggerthii DSM 20697]
gi|316909404|gb|EFV31084.1| component ribonuclease P protein [Bacteroides eggerthii 1_2_48FAA]
Length = 139
Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F L V L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
NR++R+++EA R+ +L +L+ ++ L I F L + VE
Sbjct: 65 NRVKRQIREAYRVNKHELLN-----ILVERKCRLAIAFIYLSDQLVE 106
>gi|115353268|ref|YP_775107.1| ribonuclease P protein component [Burkholderia ambifaria AMMD]
gi|115283256|gb|ABI88773.1| ribonuclease P protein component [Burkholderia ambifaria AMMD]
Length = 153
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLL 105
>gi|15640027|ref|NP_219387.1| RNAse P, protein component [Treponema pallidum subsp. pallidum
str. Nichols]
Length = 135
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
+ R F ++ + F L N R T + G AV RNR RR KEA
Sbjct: 28 RVRAVFKQGRRFCYGRACLFVL-----PNGCAYSRFLATFRRGYGKAVARNRARRLSKEA 82
Query: 68 VRLCAEGVLKHGHDYVL 84
R ++ G D VL
Sbjct: 83 YRALKSSLV-PGFDLVL 98
>gi|296157623|ref|ZP_06840458.1| ribonuclease P protein component [Burkholderia sp. Ch1-1]
gi|295892395|gb|EFG72178.1| ribonuclease P protein component [Burkholderia sp. Ch1-1]
Length = 161
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 30 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 86
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
+RR +EA RL G D +L
Sbjct: 87 VRRIAREAFRLRRADFG--GWDVLL 109
>gi|268318301|ref|YP_003292020.1| ribonuclease P protein component [Rhodothermus marinus DSM 4252]
gi|262335835|gb|ACY49632.1| ribonuclease P protein component [Rhodothermus marinus DSM 4252]
Length = 103
Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK 77
+ + +++ +VGF+ ++ AV RNR+RR L+E RL +++
Sbjct: 7 VVPRSEVGADVPVQVGFSAGRQARRAVVRNRIRRLLRETYRLHQHPLVE 55
>gi|326335903|ref|ZP_08202080.1| RNase P protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691867|gb|EGD33829.1| RNase P protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 125
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVR 69
L ++G + K L L N N +V +V K K AV RNR++R ++E+ R
Sbjct: 24 LLFREGSIIKKYPLKLLYLPTINENFSTQVLISVPKRKFKRAVHRNRIKRLIRESYR 80
>gi|284931018|gb|ADC30956.1| ribonuclease P protein component [Mycoplasma gallisepticum str.
F]
Length = 115
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M LKK F LVK + + N ++G +V KK AV RN
Sbjct: 1 MKRENSLKKITNFLELVKSKNKYYSNNYVIYAEKNR--ENKIKIGISVPKKLFAKAVIRN 58
Query: 59 RMRRRLK 65
+++R ++
Sbjct: 59 KIKREVR 65
>gi|315187340|gb|EFU21096.1| ribonuclease P protein component [Spirochaeta thermophila DSM
6578]
Length = 119
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G + L + N R+ F V + VERNR++R +E VRL + +L
Sbjct: 24 GRKVRVKGAGLTFIENGRD--YCRILFVVPRSIKSKVERNRLKRVARECVRL-QKDLLPP 80
Query: 79 GHDYVLI 85
G+D LI
Sbjct: 81 GYDLALI 87
>gi|187925956|ref|YP_001897598.1| ribonuclease P [Burkholderia phytofirmans PsJN]
gi|187717150|gb|ACD18374.1| ribonuclease P protein component [Burkholderia phytofirmans PsJN]
Length = 161
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 30 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 86
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
+RR +EA RL G D +L
Sbjct: 87 VRRIAREAFRLRRAEFG--GWDVLL 109
>gi|209519688|ref|ZP_03268477.1| ribonuclease P protein component [Burkholderia sp. H160]
gi|209499905|gb|EDZ99971.1| ribonuclease P protein component [Burkholderia sp. H160]
Length = 159
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 43/135 (31%), Gaps = 20/135 (14%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 28 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKELCNH-----FVERV 106
+RR +EA RL G D +L A A P K LC +
Sbjct: 85 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSASSPPLKTLCRSEIEALLDKAA 142
Query: 107 RRNKRSYYSGKNFSR 121
R R R
Sbjct: 143 REITRRQAPPAEAPR 157
>gi|298373590|ref|ZP_06983579.1| ribonuclease P protein component [Bacteroidetes oral taxon 274
str. F0058]
gi|298274642|gb|EFI16194.1| ribonuclease P protein component [Bacteroidetes oral taxon 274
str. F0058]
Length = 131
Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCA 72
K + + P + V N + RV F+V K+ AV+RNR +R L+E+ RL
Sbjct: 26 LYAKGRKRLETPLMATYVKTANKGEV--RVLFSVPKRYFRKAVDRNRYKRLLRESYRLNK 83
Query: 73 EGVLKHGHD 81
E V D
Sbjct: 84 ETVTTAITD 92
>gi|145220574|ref|YP_001131283.1| ribonuclease P [Prosthecochloris vibrioformis DSM 265]
gi|145206738|gb|ABP37781.1| hypothetical protein Cvib_1773 [Chlorobium phaeovibrioides DSM 265]
Length = 159
Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 19 GELRKGPFFSLEVLN----NNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAE 73
G+ KG F L L+ P V F V+KK AV RNR++R ++EA RL
Sbjct: 41 GKSLKGNFLRLVYLSHDAVRGGFASPPSVMFAVSKKTLPAAVMRNRVKRLMREAYRLEKP 100
Query: 74 GVL 76
+L
Sbjct: 101 MLL 103
>gi|258593682|emb|CBE70023.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 122
Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ +F+L + ++ F + G A RNR +R +E RL
Sbjct: 9 TARTRRAFNNKYFTLYARFASTKKQQLQLAF--GARTGTATVRNRAKRLARETFRLNCHR 66
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
L G + ++ A++ + +++ V+ +
Sbjct: 67 -LPAGIEILITAQKGIGALSRRDMRGQIVDLFEYACK 102
>gi|159027292|emb|CAO89387.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 60
Score = 38.3 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
NR++R+++ +R + G ++I + A+ ++ + + +
Sbjct: 4 NRLKRQIRAVIRELLPEIA-TGWRGIIIIRPGAIECNYEHFLRELKQLLVKA 54
>gi|254298584|ref|ZP_04966035.1| ribonuclease P protein component [Burkholderia pseudomallei 406e]
gi|157808593|gb|EDO85763.1| ribonuclease P protein component [Burkholderia pseudomallei 406e]
Length = 136
Score = 38.3 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRD---ARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R+ G D +L
Sbjct: 65 VKRLAREAFRMRRAEFA--GWDILL 87
>gi|325299416|ref|YP_004259333.1| Ribonuclease P protein component [Bacteroides salanitronis DSM
18170]
gi|324318969|gb|ADY36860.1| Ribonuclease P protein component [Bacteroides salanitronis DSM
18170]
Length = 131
Score = 38.3 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
P ++ + N V +V+KK AV+RNR++R+++EA R
Sbjct: 36 PLRAVYMPVENAGLPAVSVLISVSKKRFKRAVKRNRVKRQIREAYRKN 83
>gi|76810255|ref|YP_331718.1| ribonuclease P protein component [Burkholderia pseudomallei 1710b]
gi|134281555|ref|ZP_01768263.1| ribonuclease P protein component [Burkholderia pseudomallei 305]
gi|254186621|ref|ZP_04893138.1| ribonuclease P protein component [Burkholderia pseudomallei Pasteur
52237]
gi|254194650|ref|ZP_04901081.1| ribonuclease P protein component [Burkholderia pseudomallei S13]
gi|76579708|gb|ABA49183.1| ribonuclease P protein component [Burkholderia pseudomallei 1710b]
gi|134247222|gb|EBA47308.1| ribonuclease P protein component [Burkholderia pseudomallei 305]
gi|157934306|gb|EDO89976.1| ribonuclease P protein component [Burkholderia pseudomallei Pasteur
52237]
gi|169651400|gb|EDS84093.1| ribonuclease P protein component [Burkholderia pseudomallei S13]
Length = 155
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRD---ARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R G D +L
Sbjct: 84 VKRLAREAFRTRRAEFA--GWDILL 106
>gi|189184289|ref|YP_001938074.1| ribonuclease P [Orientia tsutsugamushi str. Ikeda]
gi|189181060|dbj|BAG40840.1| ribonuclease P [Orientia tsutsugamushi str. Ikeda]
Length = 179
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 43 VGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVL 76
+G V+KK G AV RN ++RR+K +R L
Sbjct: 69 LGLKVSKKCGRTAVIRNTIKRRIKACMRQIISQYL 103
>gi|323343532|ref|ZP_08083759.1| ribonuclease P protein component [Prevotella oralis ATCC 33269]
gi|323095351|gb|EFZ37925.1| ribonuclease P protein component [Prevotella oralis ATCC 33269]
Length = 132
Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 25 PFFSLEVLNNNNSNLLPRVGF--TVTKK-QGCAVERNRMRRRLKEAVRLC 71
P + L ++ +V +V+KK AV+RNR++R+++EA R
Sbjct: 37 PLRVVYKLEEQHAEQRAKVQIMVSVSKKHFKHAVKRNRVKRQVREAYRKN 86
>gi|206895084|ref|YP_002247366.1| ribonuclease P protein component [Coprothermobacter proteolyticus
DSM 5265]
gi|254808061|sp|B5Y9B9|RNPA_COPPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206737701|gb|ACI16779.1| ribonuclease P protein component [Coprothermobacter proteolyticus
DSM 5265]
Length = 119
Score = 38.3 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ ++ F+ V K G + + + + L + RV V+K+ G AV RNR
Sbjct: 1 MRRSLRLQGKKNFSRVYKEGSVVRSDYVVVYFLPASEQ----RVAVVVSKRFGNAVRRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+RR L EA + L G+ Y+++ + L +
Sbjct: 57 IRRLLLEAWQEN-HDHLPSGY-YIILPRSSLLSVE 89
>gi|325954656|ref|YP_004238316.1| ribonuclease P protein component [Weeksella virosa DSM 16922]
gi|323437274|gb|ADX67738.1| Ribonuclease P protein component [Weeksella virosa DSM 16922]
Length = 121
Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
R + L ++ + + +V+KK AV+RN+M+RR++EA RL
Sbjct: 24 SRSYSVYPLRIVYRVSEQEKNQFAVSVSKKRFKLAVDRNKMKRRIREAYRLN 75
>gi|187918307|ref|YP_001883870.1| ribonuclease P protein component [Borrelia hermsii DAH]
gi|254808050|sp|B2S0E4|RNPA_BORHD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119861155|gb|AAX16950.1| ribonuclease P protein component [Borrelia hermsii DAH]
Length = 114
Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+ R+ T + AV+RNR+RR KE R + D++ + + + E+
Sbjct: 39 AISRILVTFPRIFKGAVKRNRVRRIFKECFRKQFALLKDRYVDFIFVVYPQKADVNYHEV 98
Query: 99 CNHFVERV 106
V
Sbjct: 99 ETILKNIV 106
>gi|13508420|ref|NP_110370.1| RNaseP C5 chain [Mycoplasma pneumoniae M129]
gi|2500594|sp|P75111|RNPA_MYCPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1673822|gb|AAB95809.1| RNaseP C5 chain [Mycoplasma pneumoniae M129]
Length = 118
Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLK 65
L+ R+ FA + + + R F L N R +++K K AVERN +RR++K
Sbjct: 9 LRDRKVFAALLRSKRRFFSTF-LMAYFMPNRVRTWRAAVSISKTKYKLAVERNLIRRQVK 67
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+R + + D ++I + L + FKE F+ ++ +
Sbjct: 68 AIMREQFCNL--NAVDVLVIINQGFLELTFKEKQTIFLNLCQKLQELDAPKP 117
>gi|212550542|ref|YP_002308859.1| ribonuclease P [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548780|dbj|BAG83448.1| ribonuclease P protein component [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 131
Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
P + + + + +V+KK + +RNR++R ++E+ RL + +Y+
Sbjct: 36 PLRIVYLEKQTKGKIPVSILISVSKKRLRHSFKRNRIKRLIRESYRLTKNRL----WEYL 91
Query: 84 LIAKRD 89
I +
Sbjct: 92 FIKNKG 97
>gi|62262530|gb|AAX78080.1| unknown protein [synthetic construct]
Length = 152
Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTV--TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F+ + N + G V TKK A +RN RR +KE+ RL + L
Sbjct: 59 HFTFLLAKRNIKDP----GLCVILTKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSL 112
Query: 83 VLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYSGK 117
++++K+ A +EL F +++ Y
Sbjct: 113 IVLSKKTAAQATKEELWQSITEFECFLKKLHYPYDVPD 150
>gi|171316347|ref|ZP_02905567.1| ribonuclease P protein component [Burkholderia ambifaria MEX-5]
gi|171098476|gb|EDT43278.1| ribonuclease P protein component [Burkholderia ambifaria MEX-5]
Length = 153
Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLL 105
>gi|119953230|ref|YP_945439.1| ribonuclease P protein component [Borrelia turicatae 91E135]
gi|254808053|sp|A1QZM7|RNPA_BORT9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119862001|gb|AAX17769.1| ribonuclease P protein component [Borrelia turicatae 91E135]
Length = 114
Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE-- 97
+ R+ T K AV+RNR+RR KE R + D++ + + + + E
Sbjct: 40 ISRMIVTFPKVFKGAVKRNRVRRIFKECFRKQLALLKNRYVDFIFVVYPQRVDVNYCEVD 99
Query: 98 --LCNHFVERVRRN 109
L N V ++R
Sbjct: 100 TMLKNIIVHVMKRK 113
>gi|168699596|ref|ZP_02731873.1| ribonuclease E [Gemmata obscuriglobus UQM 2246]
Length = 987
Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 18/87 (20%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
G + L L RVG V++K E + RRRL+E + A
Sbjct: 573 SIAGRYLVLM-------PSLNRVG--VSRKI----EDHDARRRLREIMSTLAPPKGVG-- 617
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVR 107
I + A+ KEL N +R
Sbjct: 618 ---FIVRTAAVDRDAKELQNDLAYLLR 641
>gi|317970541|ref|ZP_07971931.1| ribonuclease P protein component of ribozyme [Synechococcus sp.
CB0205]
Length = 113
Score = 37.9 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
Query: 14 ALVKKGELRKGPFFSLEVL----------NNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
+ +KG G + L + +++ L R+G V+ K +VERNR+RR
Sbjct: 4 RIYQKGRRIHGQWMVLRTMAAKPELLKTDPRDHTPLSCRLGVVVSSKVSKRSVERNRLRR 63
Query: 63 RL 64
L
Sbjct: 64 LL 65
>gi|194335115|ref|YP_002016975.1| ribonuclease P [Prosthecochloris aestuarii DSM 271]
gi|194312933|gb|ACF47328.1| ribonuclease P protein component [Prosthecochloris aestuarii DSM
271]
Length = 140
Score = 37.9 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVG-----FTVTKK-QGCAVERNRMRRRLKEAVR 69
G KG F + + + L R G F V KK AV+RNR++R ++EA R
Sbjct: 28 GSSIKGEFLRIVFASLSLDGLSCRRGNTLVLFVVGKKNVPSAVDRNRIKRLMREAYR 84
>gi|295678216|ref|YP_003606740.1| ribonuclease P protein component [Burkholderia sp. CCGE1002]
gi|295438059|gb|ADG17229.1| ribonuclease P protein component [Burkholderia sp. CCGE1002]
Length = 159
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 28 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
+RR +EA RL G D +L
Sbjct: 85 VRRIAREAFRLRRAEFG--GWDVLL 107
>gi|254495042|ref|ZP_01053733.2| ribonuclease P protein component [Polaribacter sp. MED152]
gi|213690624|gb|EAQ43161.2| ribonuclease P protein component [Polaribacter sp. MED152]
Length = 133
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 14 ALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
L K+G K P + + + S ++G +V K+ A +RNR++R ++E+ RL
Sbjct: 20 KLYKEGSSVKAFPLRMVFLQTEHTSEYPAQMGVSVAKRNFKKAPDRNRLKRLMRESYRL- 78
Query: 72 AEGVLKHGHD--YVL-IAKRDALFIPFKELCNHFVERVR 107
+ ++ + D YV I+ + E+ + +
Sbjct: 79 QKEIVYNNADKPYVFMISYLGKEEKEYHEIYTKMNKLLH 117
>gi|189460192|ref|ZP_03008977.1| hypothetical protein BACCOP_00829 [Bacteroides coprocola DSM
17136]
gi|189433053|gb|EDV02038.1| hypothetical protein BACCOP_00829 [Bacteroides coprocola DSM
17136]
Length = 131
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 19 GELRKGPFF---SLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEG 74
G + P F + + V +V KK AV+RNR++R+++EA R
Sbjct: 27 GGSKSLPAFPLRIVYMPVEGEELPAVSVLISVPKKRFKRAVKRNRVKRQIREAYRKHKYL 86
Query: 75 VLKH 78
++
Sbjct: 87 LIDP 90
>gi|313887223|ref|ZP_07820918.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923314|gb|EFR34128.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 252
Score = 37.5 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFI--PFKELCNHFV 103
++ AV+RNR++R + A RL V H V IA + + EL
Sbjct: 72 RRFKHAVDRNRIKRMTRSAYRLHKAPLWQVATQHHCTVRIALQSVAKTMPSYPELEQAVE 131
Query: 104 ERVRRNKRSYYSGKNFSRKS 123
+ R + S ++
Sbjct: 132 RAIARIVKEIEKANPTSPEA 151
>gi|332879703|ref|ZP_08447394.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682330|gb|EGJ55236.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 125
Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKH----GHDYVLIAKRDALFIPFKELC 99
+V K+ AV RNR++R ++E RL + + I K +P++ +
Sbjct: 49 ISVPKRQFKRAVHRNRLKRLIRECYRLQKHLLPPPKQPCALALIYIGKE---ELPYQAIY 105
Query: 100 NHFVERVRR 108
E +RR
Sbjct: 106 ERVGELMRR 114
>gi|53724900|ref|YP_104856.1| ribonuclease P protein component [Burkholderia mallei ATCC 23344]
gi|121600212|ref|YP_994140.1| ribonuclease P protein component [Burkholderia mallei SAVP1]
gi|124386190|ref|YP_001028203.1| ribonuclease P protein component [Burkholderia mallei NCTC 10229]
gi|126441805|ref|YP_001057146.1| ribonuclease P protein component [Burkholderia pseudomallei 668]
gi|126449622|ref|YP_001083058.1| ribonuclease P protein component [Burkholderia mallei NCTC 10247]
gi|167892203|ref|ZP_02479605.1| ribonuclease P protein component [Burkholderia pseudomallei 7894]
gi|167908932|ref|ZP_02496023.1| ribonuclease P protein component [Burkholderia pseudomallei 112]
gi|167916973|ref|ZP_02504064.1| ribonuclease P protein component [Burkholderia pseudomallei
BCC215]
gi|254175104|ref|ZP_04881765.1| ribonuclease P protein component [Burkholderia mallei ATCC 10399]
gi|254201966|ref|ZP_04908330.1| ribonuclease P protein component [Burkholderia mallei FMH]
gi|254207298|ref|ZP_04913649.1| ribonuclease P protein component [Burkholderia mallei JHU]
gi|254359606|ref|ZP_04975877.1| ribonuclease P protein component [Burkholderia mallei 2002721280]
gi|60390318|sp|Q62EM2|RNPA_BURMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226703|sp|A3MS22|RNPA_BURM7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226704|sp|A2S8D4|RNPA_BURM9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226705|sp|A1V7D7|RNPA_BURMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226707|sp|A3N475|RNPA_BURP6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52428323|gb|AAU48916.1| ribonuclease P protein component [Burkholderia mallei ATCC 23344]
gi|121229022|gb|ABM51540.1| ribonuclease P protein component [Burkholderia mallei SAVP1]
gi|124294210|gb|ABN03479.1| ribonuclease P protein component [Burkholderia mallei NCTC 10229]
gi|126221298|gb|ABN84804.1| ribonuclease P protein component [Burkholderia pseudomallei 668]
gi|126242492|gb|ABO05585.1| ribonuclease P protein component [Burkholderia mallei NCTC 10247]
gi|147747860|gb|EDK54936.1| ribonuclease P protein component [Burkholderia mallei FMH]
gi|147752840|gb|EDK59906.1| ribonuclease P protein component [Burkholderia mallei JHU]
gi|148028820|gb|EDK86752.1| ribonuclease P protein component [Burkholderia mallei 2002721280]
gi|160696149|gb|EDP86119.1| ribonuclease P protein component [Burkholderia mallei ATCC 10399]
Length = 136
Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRD---ARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILL 87
>gi|189347991|ref|YP_001944520.1| ribonuclease P [Chlorobium limicola DSM 245]
gi|189342138|gb|ACD91541.1| ribonuclease P [Chlorobium limicola DSM 245]
Length = 136
Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKH 78
F V+KK AV RNR++R +KEA RL +L+
Sbjct: 56 FAVSKKSVPKAVMRNRVKRLMKEAYRLEKTVLLQK 90
>gi|53717716|ref|YP_106702.1| ribonuclease P protein component [Burkholderia pseudomallei
K96243]
gi|126452960|ref|YP_001064390.1| ribonuclease P protein component [Burkholderia pseudomallei
1106a]
gi|226193256|ref|ZP_03788866.1| ribonuclease P [Burkholderia pseudomallei Pakistan 9]
gi|254184150|ref|ZP_04890741.1| ribonuclease P protein component [Burkholderia pseudomallei 1655]
gi|254258784|ref|ZP_04949838.1| ribonuclease P protein component [Burkholderia pseudomallei
1710a]
gi|60390333|sp|Q63YW3|RNPA_BURPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226706|sp|A3NPW9|RNPA_BURP0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52208130|emb|CAH34060.1| ribonuclease P protein component [Burkholderia pseudomallei
K96243]
gi|126226602|gb|ABN90142.1| ribonuclease P protein component [Burkholderia pseudomallei
1106a]
gi|184214682|gb|EDU11725.1| ribonuclease P protein component [Burkholderia pseudomallei 1655]
gi|225934856|gb|EEH30833.1| ribonuclease P [Burkholderia pseudomallei Pakistan 9]
gi|254217473|gb|EET06857.1| ribonuclease P protein component [Burkholderia pseudomallei
1710a]
Length = 136
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRD---ARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILL 87
>gi|167582768|ref|ZP_02375642.1| ribonuclease P protein component [Burkholderia thailandensis
TXDOH]
gi|167620896|ref|ZP_02389527.1| ribonuclease P protein component [Burkholderia thailandensis Bt4]
Length = 136
Score = 37.1 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKPTGRE---ARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILL 87
>gi|313824522|gb|EFS62236.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
Length = 62
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV RNR++RRL+ R L+ G V+ A A P + + R
Sbjct: 2 GNAVTRNRVKRRLRHLCR-PLVDELEDGTVVVVRALPAAATQP-DRVAKDLDGAWHQALR 59
Query: 112 SYY 114
Sbjct: 60 KLR 62
>gi|198274135|ref|ZP_03206667.1| hypothetical protein BACPLE_00272 [Bacteroides plebeius DSM
17135]
gi|198273213|gb|EDY97482.1| hypothetical protein BACPLE_00272 [Bacteroides plebeius DSM
17135]
Length = 131
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF---SLEVLNNNNSNLLPRVGFTVTKK-QGCAVE 56
+S + L R + G + P F + + + + +V KK AV+
Sbjct: 9 LSKVERLNSRILIERLFTGGSKSLPAFPLRIVYMPVEGENLPAATILISVPKKRFKRAVK 68
Query: 57 RNRMRRRLKEAVRLC 71
RNR++R+++EA R
Sbjct: 69 RNRVKRQVREAYRKN 83
>gi|258648282|ref|ZP_05735751.1| ribonuclease P protein component [Prevotella tannerae ATCC 51259]
gi|260852201|gb|EEX72070.1| ribonuclease P protein component [Prevotella tannerae ATCC 51259]
Length = 130
Score = 37.1 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVRLCAE 73
P ++ S +V +V K K AV+RNR +R L+EA R +
Sbjct: 33 PLRAVYRRIKPGSKPAIKVLLSVPKRKLRRAVDRNRAKRLLREAYRHHKD 82
>gi|189501468|ref|YP_001960938.1| ribonuclease P [Chlorobium phaeobacteroides BS1]
gi|189496909|gb|ACE05457.1| ribonuclease P protein component, putative [Chlorobium
phaeobacteroides BS1]
Length = 118
Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 32 LNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVR 69
L ++ LP+V F V K+ AV+RNR++R ++EA R
Sbjct: 23 LEQSSKRSLPKVLFIVGKRIVPDAVDRNRIKRLMREAYR 61
>gi|56477032|ref|YP_158621.1| ribonuclease P protein component [Aromatoleum aromaticum EbN1]
gi|67461305|sp|Q5P4P2|RNPA_AZOSE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56313075|emb|CAI07720.1| Ribonuclease P protein component [Aromatoleum aromaticum EbN1]
Length = 119
Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 4/107 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L+K +++ V F + N R+G + KK A RN ++R +
Sbjct: 16 RLRKTDEYSSVFAFRRAFKGRFFI-AHYRPNELGTARLGVVIAKKLAKRANVRNLLKRIV 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E R + HD V+ + + V + R +
Sbjct: 75 REQFRKARPALA--HHDLVVRLHVPVKMATRAMINDDVVNLLGRFRE 119
>gi|225620458|ref|YP_002721715.1| ribonuclease P protein component [Brachyspira hyodysenteriae WA1]
gi|225215277|gb|ACN84011.1| ribonuclease P protein component [Brachyspira hyodysenteriae WA1]
Length = 59
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDY-VLIAKRDALFIP-FKELCNHFVERVRR 108
RNR +R ++E R + + G+DY +++ + D+ +P F + ++ ++
Sbjct: 3 RNRAKRIVREIYR-TQKDKIPTGYDYFIIVNRFDSYKLPSFDDYKRDLLKLFQK 55
>gi|288800269|ref|ZP_06405727.1| ribonuclease P protein component [Prevotella sp. oral taxon 299
str. F0039]
gi|288332482|gb|EFC70962.1| ribonuclease P protein component [Prevotella sp. oral taxon 299
str. F0039]
Length = 145
Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 19 GELRKGPFFSLEVL----NNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
G+ R F + V+ + + +V +V K+ AV+RNR++R+L+EA RL
Sbjct: 28 GKSRALSAFPIRVVYRYVHRLPTEAPFQVLISVPKRNLKHAVDRNRVKRQLREAYRLN 85
>gi|212217711|ref|YP_002304498.1| ribonuclease P protein component [Coxiella burnetii CbuK_Q154]
gi|212011973|gb|ACJ19353.1| ribonuclease P protein component [Coxiella burnetii CbuK_Q154]
Length = 122
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KEA R+ + + D V++AK ++ KEL N ++ R + S
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|212211695|ref|YP_002302631.1| ribonuclease P protein component [Coxiella burnetii CbuG_Q212]
gi|212010105|gb|ACJ17486.1| ribonuclease P protein component [Coxiella burnetii CbuG_Q212]
Length = 122
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KEA R+ + + D V++AK ++ KEL N ++ R + S
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|332143493|ref|YP_004429231.1| ribonuclease P [Alteromonas macleodii str. 'Deep ecotype']
gi|327553515|gb|AEB00234.1| ribonuclease P [Alteromonas macleodii str. 'Deep ecotype']
Length = 55
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
M+R ++E+ R + D ++I K A + +E+ + ++ +
Sbjct: 1 MKRLVRESFRHKQHNL--PNVDIIVIGKSGADNLSNQEVFATLDKLWKKLNKR 51
>gi|332299745|ref|YP_004441666.1| Ribonuclease P protein component [Porphyromonas asaccharolytica DSM
20707]
gi|332176808|gb|AEE12498.1| Ribonuclease P protein component [Porphyromonas asaccharolytica DSM
20707]
Length = 252
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFI--PFKELCNHFV 103
++ AV+RNR++R + A RL V H V IA + + EL
Sbjct: 72 RRFKHAVDRNRIKRMTRSAYRLHKAPLWQVATQHHCTVRIALQSVAKTMPTYPELEQAVE 131
Query: 104 ERVRRNKRSYYSGKNFSRKS 123
+ R + S ++
Sbjct: 132 RAIARIVKEIEKANPTSPEA 151
>gi|237747153|ref|ZP_04577633.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS]
gi|229378504|gb|EEO28595.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS]
Length = 123
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
S+ + K F+ V + + F L +N R+G V K+ AV RN
Sbjct: 6 SSDRRIVKTDDFSSVFRMRPCARTEHFVLYA--RSNQLAHARLGIVVAKRFAPRAVTRNT 63
Query: 60 MRRRLKEAVR 69
++R +E R
Sbjct: 64 VKRICREVFR 73
>gi|153209753|ref|ZP_01947491.1| ribonuclease P protein component [Coxiella burnetii 'MSU Goat
Q177']
gi|165922506|ref|ZP_02219677.1| ribonuclease P protein component [Coxiella burnetii RSA 334]
gi|120575256|gb|EAX31880.1| ribonuclease P protein component [Coxiella burnetii 'MSU Goat
Q177']
gi|165916711|gb|EDR35315.1| ribonuclease P protein component [Coxiella burnetii RSA 334]
Length = 121
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KEA R+ + + D V++AK ++ KEL N ++ R + S
Sbjct: 68 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 120
>gi|300692997|ref|YP_003753992.1| ribonuclease P protein component [Ralstonia solanacearum PSI07]
gi|299080057|emb|CBJ52732.1| Ribonuclease P protein component [Ralstonia solanacearum PSI07]
Length = 111
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRL 70
N + R+G V KK AVERN ++R+ +E RL
Sbjct: 5 RANGHPQARLGIVVGKKFARRAVERNLIKRQCRELFRL 42
>gi|281424610|ref|ZP_06255523.1| ribonuclease P protein component [Prevotella oris F0302]
gi|281401281|gb|EFB32112.1| ribonuclease P protein component [Prevotella oris F0302]
Length = 134
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
+ +E + N ++ +V KK AV+RNR++R+++EA RL
Sbjct: 42 YMPMEAEDENQQLPRTQLLVSVPKKCFKRAVKRNRVKRQVREAYRL 87
>gi|149277972|ref|ZP_01884111.1| RNase P protein, subunit A [Pedobacter sp. BAL39]
gi|149231170|gb|EDM36550.1| RNase P protein, subunit A [Pedobacter sp. BAL39]
Length = 145
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHG---------HDYVLIAKRDALFIP 94
V+KK A +RN ++RR +EA RL G+L I K+
Sbjct: 64 INVSKKRFKKATDRNLIKRRSREAYRLLKGGLLYPHLSSLPGLMIFSLQFIGKKK---YE 120
Query: 95 FKELCNHFVERVRRNKRS 112
F + +++ + S
Sbjct: 121 FDFMEKKMALALKKLQES 138
>gi|215919289|ref|NP_820895.2| ribonuclease P protein component [Coxiella burnetii RSA 493]
gi|206584173|gb|AAO91409.2| ribonuclease P protein component [Coxiella burnetii RSA 493]
Length = 122
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KEA R+ + + D V++AK ++ KEL N ++ + + S
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLEKQSKRSSS 121
>gi|91785813|ref|YP_561019.1| ribonuclease P [Burkholderia xenovorans LB400]
gi|123167870|sp|Q13SH2|RNPA_BURXL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91689767|gb|ABE32967.1| ribonuclease P protein component [Burkholderia xenovorans LB400]
Length = 139
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
+RR +EA RL G D +L
Sbjct: 65 VRRIAREAFRLRRAEFG--GWDVLL 87
>gi|332828475|gb|EGK01180.1| ribonuclease P [Dysgonomonas gadei ATCC BAA-286]
Length = 139
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLC 71
KK AV+RNR++R +KEA RL
Sbjct: 65 KKFKRAVKRNRVKRLVKEAFRLN 87
>gi|78187973|ref|YP_376016.1| ribonuclease P [Chlorobium luteolum DSM 273]
gi|78167875|gb|ABB24973.1| ribonuclease P protein component, putative [Chlorobium luteolum
DSM 273]
Length = 122
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 18 KGELRKGPFFSLEVL--NNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEG 74
G+ KG F + ++ P V F V+KK AV RNR +R ++EA RL
Sbjct: 13 NGKSLKGDFLRIAYRSPAEGPESVFPSVMFAVSKKTLPSAVRRNRAKRMMREAYRLEKPF 72
Query: 75 VLK 77
+ +
Sbjct: 73 LAQ 75
>gi|161831534|ref|YP_001597734.1| ribonuclease P protein component [Coxiella burnetii RSA 331]
gi|1173098|sp|P45648|RNPA_COXBU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043735|sp|A9NBA3|RNPA_COXBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|511457|gb|AAA56917.1| RNase P protein component [Coxiella burnetii]
gi|161763401|gb|ABX79043.1| ribonuclease P protein component [Coxiella burnetii RSA 331]
Length = 121
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KEA R+ + + D V++AK ++ KEL N ++ + + S
Sbjct: 68 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLEKQSKRSSS 120
>gi|322371316|ref|ZP_08045868.1| isocitrate lyase [Haladaptatus paucihalophilus DX253]
gi|320549306|gb|EFW90968.1| isocitrate lyase [Haladaptatus paucihalophilus DX253]
Length = 354
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R G K+ V R + R R K AV K D V+IA+ DA
Sbjct: 124 EDQTSPKRCGHIAGKQI---VSREKARSRFKAAV------DAKQSDDTVIIARTDAYGSA 174
Query: 95 FKELCNHFVE 104
+ H
Sbjct: 175 NGDWEEHLER 184
>gi|20150011|gb|AAM12913.1| MmpIV [Pseudomonas fluorescens]
Length = 6521
Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 59 RMRRRL--KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R+RR L +EA A + GH V+ + +EL F R+ RS +
Sbjct: 6108 RLRRLLVQREAAEAQAPRFRRDGHYLVVGGLGPVGELLCQELAGTFQARLSIVSRSAPNA 6167
Query: 117 KNFSR 121
+ +R
Sbjct: 6168 EQQAR 6172
>gi|294674939|ref|YP_003575555.1| ribonuclease P protein component [Prevotella ruminicola 23]
gi|294471947|gb|ADE81336.1| ribonuclease P protein component [Prevotella ruminicola 23]
Length = 130
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+V KK AV+RNR++R+++EA R
Sbjct: 56 ISVPKKRFKHAVDRNRVKRQVREAYRKN 83
>gi|304373459|ref|YP_003856668.1| Ribonuclease P protein component [Mycoplasma hyorhinis HUB-1]
gi|304309650|gb|ADM22130.1| Ribonuclease P protein component [Mycoplasma hyorhinis HUB-1]
gi|330723620|gb|AEC45990.1| ribonuclease P protein component [Mycoplasma hyorhinis MCLD]
Length = 116
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++K QF ++ + L +G ++ KK AV+RN
Sbjct: 1 MLNFKKVRKNWQFQNIINFKQQIVNKELILYY----KEFFQFELGISIPKKFVNAVKRNY 56
Query: 60 MRRRLKEAVR--LCAEGVLKHGHDYVLIAKRDALFIPFKE-------LCNHFVERVRRNK 110
+R++K ++ L + +LI ++ L + FK + N + K
Sbjct: 57 YKRQIKIIIQNYLKNKKEFNVKFQIILITRKSFLNLDFKTKEIKIKNILNELENIWNKRK 116
>gi|219848107|ref|YP_002462540.1| ribonuclease P protein component [Chloroflexus aggregans DSM 9485]
gi|254808057|sp|B8G7S5|RNPA_CHLAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219542366|gb|ACL24104.1| ribonuclease P protein component [Chloroflexus aggregans DSM 9485]
Length = 135
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF V++ G + +L V + R GF ++ G AV+RNR
Sbjct: 1 MRRANRLRRPAQFRRVRQTGRTFSSAWLTLTVAPGRRDGV--RCGFITGRRLGKAVQRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRNK 110
RRR++EAVRL L G+D + + + + PF +L + +R+
Sbjct: 59 ARRRVREAVRLLLPS-LTTGYDLLFAIRSPEVIEAPFSQLQADIIRLLRQAC 109
>gi|107024096|ref|YP_622423.1| ribonuclease P protein component [Burkholderia cenocepacia AU 1054]
gi|116691182|ref|YP_836805.1| ribonuclease P protein component [Burkholderia cenocepacia HI2424]
gi|206558827|ref|YP_002229587.1| ribonuclease P protein component [Burkholderia cenocepacia J2315]
gi|105894285|gb|ABF77450.1| ribonuclease P protein component [Burkholderia cenocepacia AU 1054]
gi|116649271|gb|ABK09912.1| ribonuclease P protein component [Burkholderia cenocepacia HI2424]
gi|198034864|emb|CAR50736.1| ribonuclease P protein component [Burkholderia cenocepacia J2315]
Length = 153
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLL 105
>gi|78067991|ref|YP_370760.1| ribonuclease P protein [Burkholderia sp. 383]
gi|77968736|gb|ABB10116.1| ribonuclease P protein component [Burkholderia sp. 383]
Length = 153
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + S R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKPTGES---ARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLL 105
>gi|149369334|ref|ZP_01889186.1| ribonuclease P [unidentified eubacterium SCB49]
gi|149356761|gb|EDM45316.1| ribonuclease P [unidentified eubacterium SCB49]
Length = 119
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 45 FTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHG-----HDYVLIAKRDALFIPFKEL 98
F+V K+ AV+RNR++R+L+EA R+ + ++ A+ + +L
Sbjct: 49 FSVPKRLFKLAVDRNRIKRQLREAYRINRPSFEQENDKKFVLMFIYFAREEVTHA---QL 105
Query: 99 CNHFVERVRRNKR 111
+ +++ K+
Sbjct: 106 EKAMLTLLKQLKQ 118
>gi|170734515|ref|YP_001766462.1| ribonuclease P protein component [Burkholderia cenocepacia MC0-3]
gi|169817757|gb|ACA92340.1| ribonuclease P protein component [Burkholderia cenocepacia MC0-3]
Length = 153
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + L R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQLARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL 84
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLL 105
>gi|110598592|ref|ZP_01386860.1| ribonuclease P protein component, putative [Chlorobium
ferrooxidans DSM 13031]
gi|110339826|gb|EAT58333.1| ribonuclease P protein component, putative [Chlorobium
ferrooxidans DSM 13031]
Length = 108
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 33 NNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
N + +P + F V+KK V RNR++R ++EA R+ V++ G D
Sbjct: 16 ENRSFPGVPAILFPVSKKTVPSPVRRNRIKRMMREAYRIEKSSVIRSGRD 65
>gi|229495320|ref|ZP_04389055.1| ribonuclease P protein component [Porphyromonas endodontalis ATCC
35406]
gi|229317763|gb|EEN83661.1| ribonuclease P protein component [Porphyromonas endodontalis ATCC
35406]
Length = 129
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 19 GELRKGPFFSLE--VLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRL 70
G P + + V +V KK AV+RNR++R ++EA R+
Sbjct: 22 GSFIAYPLRVVYRIAPKSEGKEPALSVLISVAKKRFKHAVDRNRVKRLIREAYRV 76
>gi|209363713|ref|YP_001423628.2| ribonuclease P protein component [Coxiella burnetii Dugway
5J108-111]
gi|207081646|gb|ABS77389.2| ribonuclease P protein component [Coxiella burnetii Dugway
5J108-111]
Length = 122
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KE R+ + + D V++AK ++ KEL N ++ R + S
Sbjct: 69 VKETFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|255693350|ref|ZP_05417025.1| ribonuclease P protein component [Bacteroides finegoldii DSM
17565]
gi|260620927|gb|EEX43798.1| ribonuclease P protein component [Bacteroides finegoldii DSM
17565]
Length = 129
Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ + + +V+K+ AV+RNR++R+++EA R
Sbjct: 37 VVYMPVEQGEASASILISVSKRRFKRAVKRNRVKRQIREAYRKN 80
>gi|270295159|ref|ZP_06201360.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274406|gb|EFA20267.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 138
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVRLCAEGV 75
G R F L V+ L V V+ ++ AV+RNR++R+++EA R+ G+
Sbjct: 23 GGSRSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKRNRVKRQIREAYRMNKHGL 82
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFV 103
L VL K+ L + F L + V
Sbjct: 83 LA-----VLTEKKCRLAVAFIYLSDQLV 105
>gi|320536046|ref|ZP_08036104.1| ribonuclease P protein component [Treponema phagedenis F0421]
gi|320147096|gb|EFW38654.1| ribonuclease P protein component [Treponema phagedenis F0421]
Length = 116
Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G L VL N R T + G AV+RN RR KE R + L
Sbjct: 23 KQGNKYYCNGAKLFVLPNKLE--YNRFLCTFPRGYGNAVQRNAARRLSKEVYR-QMKKEL 79
Query: 77 KHGHDYVL 84
G D +L
Sbjct: 80 NQGFDLIL 87
>gi|134096618|ref|YP_001101693.1| putative RNase P, protein C5 component, processes tRNA, 4.5S RNA
(partial) [Herminiimonas arsenicoxydans]
gi|133740521|emb|CAL63572.1| putative ribonuclease P rnpA [Herminiimonas arsenicoxydans]
Length = 136
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K +F+ V + + + F L R+G K+ AV RN ++R
Sbjct: 14 RIVKTDEFSSVFRLRPVYRTAHFVLYA--RQTDLPHARLGVVAAKRLAPRAVTRNTIKRV 71
Query: 64 LKEAVRLCA 72
+E R A
Sbjct: 72 TRELFRQTA 80
>gi|189043734|sp|A9KBT3|RNPA_COXBN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 121
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL---CNHFVERVRRNKRSYYS 115
+KE R+ + + D V++AK ++ KEL N ++ R + S
Sbjct: 68 VKETFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 120
>gi|33863636|ref|NP_895196.1| ribonuclease P protein component [Prochlorococcus marinus str. MIT
9313]
gi|48474358|sp|Q7V612|RNPA_PROMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33635219|emb|CAE21544.1| bacterial ribonuclease P protein component of ribozyme
[Prochlorococcus marinus str. MIT 9313]
Length = 128
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L+ + ++++ R ++ K AV RNR+RR L + +R E +H + +VLI+
Sbjct: 41 LLKAPHRHHNSTACRCAVVISSKVSKRAVIRNRLRRLLHDHLRSRLEVAPEHCNHWVLIS 100
Query: 87 KRDALFI 93
+
Sbjct: 101 LKPVASA 107
>gi|86743222|ref|YP_483622.1| ribonuclease P protein component [Frankia sp. CcI3]
gi|86570084|gb|ABD13893.1| ribonuclease P protein component [Frankia sp. CcI3]
Length = 104
Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G + + L + + R GF V ++ G AV RNR+RRRL+E VR+ + L
Sbjct: 2 GRRTRSGPLVVHSLWTTSDDP-ARAGFVVGRRVGKAVVRNRVRRRLREQVRVRLD-TLAP 59
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS--YYSGKNFSR 121
G V+ A DA EL + R R R
Sbjct: 60 GTMLVVRALPDAATASSAELGRALDTALTRVARPAGARRPDGRGR 104
>gi|319900641|ref|YP_004160369.1| ribonuclease P protein component [Bacteroides helcogenes P
36-108]
gi|319415672|gb|ADV42783.1| ribonuclease P protein component [Bacteroides helcogenes P
36-108]
Length = 125
Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 19 GELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
G R F L V L + +V+K+ AV+RNR++R+++EA R+ +
Sbjct: 23 GGSRSFSVFPLRVVYLPVEEMEAPASILISVSKRRFKRAVKRNRVKRQIREAYRMNKHEL 82
Query: 76 L 76
L
Sbjct: 83 L 83
>gi|329956460|ref|ZP_08297057.1| putative ribonuclease P protein component [Bacteroides clarus YIT
12056]
gi|328524357|gb|EGF51427.1| putative ribonuclease P protein component [Bacteroides clarus YIT
12056]
Length = 139
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F L V L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRVNKHELL 83
>gi|167763946|ref|ZP_02436073.1| hypothetical protein BACSTE_02329 [Bacteroides stercoris ATCC
43183]
gi|167698062|gb|EDS14641.1| hypothetical protein BACSTE_02329 [Bacteroides stercoris ATCC
43183]
Length = 140
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F L V L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRVNKHELL 83
>gi|312862351|ref|ZP_07722594.1| ribonuclease P protein component [Streptococcus vestibularis F0396]
gi|311101994|gb|EFQ60194.1| ribonuclease P protein component [Streptococcus vestibularis F0396]
Length = 44
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 19/30 (63%)
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNK 110
D+V+IA++ + ++++ ++ V ++ K
Sbjct: 11 DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 40
>gi|228478132|ref|ZP_04062743.1| ribonuclease P protein component [Streptococcus salivarius SK126]
gi|228250312|gb|EEK09565.1| ribonuclease P protein component [Streptococcus salivarius SK126]
Length = 44
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 19/30 (63%)
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNK 110
D+V+IA++ + ++++ ++ V ++ K
Sbjct: 11 DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 40
>gi|224023481|ref|ZP_03641847.1| hypothetical protein BACCOPRO_00183 [Bacteroides coprophilus DSM
18228]
gi|224016703|gb|EEF74715.1| hypothetical protein BACCOPRO_00183 [Bacteroides coprophilus DSM
18228]
Length = 131
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
P + + + + +V KK AV+RNR++R+++EA R + +L
Sbjct: 34 AFPLRIVYMPIEEETRPTAAILISVPKKRFKRAVKRNRVKRQIREAYRKHKDILL 88
>gi|160891753|ref|ZP_02072756.1| hypothetical protein BACUNI_04209 [Bacteroides uniformis ATCC 8492]
gi|317478178|ref|ZP_07937347.1| ribonuclease P protein component [Bacteroides sp. 4_1_36]
gi|156859160|gb|EDO52591.1| hypothetical protein BACUNI_04209 [Bacteroides uniformis ATCC 8492]
gi|316905661|gb|EFV27446.1| ribonuclease P protein component [Bacteroides sp. 4_1_36]
Length = 138
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVRLCAEGV 75
G R F L V+ L V V+ ++ AV+RNR++R+++EA R+ G+
Sbjct: 23 GGSRSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKRNRVKRQIREAYRMNKHGL 82
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFV 103
L VL K+ L + F L + V
Sbjct: 83 LA-----VLTEKKCRLAVAFIYLSDQLV 105
>gi|325104484|ref|YP_004274138.1| ribonuclease P protein component [Pedobacter saltans DSM 12145]
gi|324973332|gb|ADY52316.1| ribonuclease P protein component [Pedobacter saltans DSM 12145]
Length = 132
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVL---KHGHD-YVLIAKRDALF--IPFKELCNHF 102
K+ +V+RN ++RR+KEA R + +L G+D Y+L+A + +K +
Sbjct: 60 KRFKHSVDRNLIKRRIKEAYRNNKQDLLYSFLTGNDKYILLAINYVGKEILDYKIMEEKM 119
Query: 103 VERVRRNKR 111
++ ++
Sbjct: 120 RGVLKMLQK 128
>gi|307564835|ref|ZP_07627363.1| ribonuclease P protein component [Prevotella amnii CRIS 21A-A]
gi|307346557|gb|EFN91866.1| ribonuclease P protein component [Prevotella amnii CRIS 21A-A]
Length = 165
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 45 FTVTKKQGC-AVERNRMRRRLKEAVRLC 71
+V KK AV+RNR++R+++EA R
Sbjct: 89 ISVPKKFFKRAVKRNRIKRQIREAFRKN 116
>gi|281357427|ref|ZP_06243915.1| hypothetical protein Vvad_PD1086 [Victivallis vadensis ATCC
BAA-548]
gi|281316030|gb|EFB00056.1| hypothetical protein Vvad_PD1086 [Victivallis vadensis ATCC
BAA-548]
Length = 94
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ ++ + L R G +K +V+RNR RR E+ RL E + VLI +
Sbjct: 1 MLLVYAPAPDDLLRCGVICGRKYSLLSVKRNRARRLCWESFRLLKEYL--PVVRLVLIPR 58
Query: 88 RDALFIPFKELCNHFVERVRRN 109
R +++ + +
Sbjct: 59 RRMEKYKRQDVTREMAGLLAKA 80
>gi|56707392|ref|YP_169288.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669863|ref|YP_666420.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis FSC198]
gi|208780037|ref|ZP_03247380.1| ribonuclease P protein component [Francisella novicida FTG]
gi|56603884|emb|CAG44868.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320196|emb|CAL08251.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis FSC198]
gi|208744041|gb|EDZ90342.1| ribonuclease P protein component [Francisella novicida FTG]
Length = 133
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTV--TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F+ + N + G V TKK A +RN RR +KE+ RL + L
Sbjct: 49 HFTFLLAKRNIKDP----GLCVILTKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSL 102
Query: 83 VLIAKRDALFIPFKELCNHFVE 104
++++K+ A +EL E
Sbjct: 103 IVLSKKTAAQATKEELWQSITE 124
>gi|257457351|ref|ZP_05622522.1| ribonuclease P protein component [Treponema vincentii ATCC 35580]
gi|257445273|gb|EEV20345.1| ribonuclease P protein component [Treponema vincentii ATCC 35580]
Length = 123
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
KKG L VL N R T + G AV+RN+ RR KE R + L
Sbjct: 18 KKGHRYSCDGAKLFVLPNKL--PYNRFVCTFKRHYGSAVQRNKARRLSKEVYR-QMKSQL 74
Query: 77 KHGHDYVL 84
G D +L
Sbjct: 75 AVGADILL 82
>gi|225025975|ref|ZP_03715167.1| hypothetical protein EUBHAL_00212 [Eubacterium hallii DSM 3353]
gi|224956761|gb|EEG37970.1| hypothetical protein EUBHAL_00212 [Eubacterium hallii DSM 3353]
Length = 403
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 19/100 (19%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
G +F + + ++KK VER R+ LK+ R Y
Sbjct: 119 GKYFVFTLTDKRTG---------ISKKIRNTVERERLETLLKKYTREE----------YG 159
Query: 84 LIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+I + +A + + L R + K + K+
Sbjct: 160 IIVRTNAAGVSEETLTKELELLQLRYEELMRKAKIATGKT 199
>gi|261878998|ref|ZP_06005425.1| ribonuclease P protein component [Prevotella bergensis DSM 17361]
gi|270334383|gb|EFA45169.1| ribonuclease P protein component [Prevotella bergensis DSM 17361]
Length = 143
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 46 TVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
+V+K+ AV+RNR++R+++EA R V +H I
Sbjct: 69 SVSKRCFKHAVDRNRVKRQVREAYRKHKAIVAEHEIAIAFI 109
>gi|224537284|ref|ZP_03677823.1| hypothetical protein BACCELL_02161 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521105|gb|EEF90210.1| hypothetical protein BACCELL_02161 [Bacteroides cellulosilyticus
DSM 14838]
Length = 150
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVRLCAEGV 75
G R F L V+ L V V+ ++ AV+RNR++R+++EA R G+
Sbjct: 23 GGARSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKRNRVKRQIREAYRKNKHGL 82
Query: 76 LKHGHD 81
L+ D
Sbjct: 83 LQTLQD 88
>gi|581220|emb|CAA25983.1| unnamed protein product [Escherichia coli]
Length = 72
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L QF V + R G + +L NS PR+G TV KK A ERNR+
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTP-QITILGRLNSLGHPRIGLTVAKKNVRRAHERNRI 65
Query: 61 RRRLKEA 67
+R + A
Sbjct: 66 KRLTRXA 72
>gi|325192109|emb|CCA26570.1| carboxyvinylcarboxyphosphonate phosphorylmutase puta [Albugo
laibachii Nc14]
gi|325192440|emb|CCA26876.1| carboxyvinylcarboxyphosphonate phosphorylmutase puta [Albugo
laibachii Nc14]
Length = 424
Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R G T K V R+ R++ AV EG G D V++A+ DA
Sbjct: 117 EDQVSPKRCGHTAGKAV---VTRDEAYARIRAAVDAREEG----GFDIVILARTDARHTH 169
Query: 95 FKELCNHFVERVRR 108
E N +R
Sbjct: 170 SPEEANARCREFKR 183
>gi|293368632|ref|ZP_06615239.1| ribonuclease P protein component [Bacteroides ovatus SD CMC 3f]
gi|292636274|gb|EFF54759.1| ribonuclease P protein component [Bacteroides ovatus SD CMC 3f]
Length = 129
Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ + + +V+K+ AV+RNR++R+++EA R
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKN 80
>gi|189346342|ref|YP_001942871.1| DNA polymerase III, alpha subunit [Chlorobium limicola DSM 245]
gi|189340489|gb|ACD89892.1| DNA polymerase III, alpha subunit [Chlorobium limicola DSM 245]
Length = 1189
Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+L + ++ RVG + K+ G A R + RL++ L D ++ +
Sbjct: 847 TLFAIEDDKGKPCIRVGLSAIKQVGGA-ARAVVTSRLRKKRDFLNLFDLTASVDLRVMNR 905
Query: 88 RDA----LFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
+ L F EL ++ + + ++ G+ +R
Sbjct: 906 KALECLILAGSFDELDSNRAKLLANVDKAIKFGQMQNR 943
>gi|332881508|ref|ZP_08449157.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332680506|gb|EGJ53454.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 146
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 15 LVKKGELRKGPFFSLEV--LNNNNSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVR 69
+ G + F L V + P V V+ ++ AV+RNR++R+++EA R
Sbjct: 23 ALFTGGSKSMSAFPLRVVFMPVPVEAPAPLVSILVSVSKRRFKRAVKRNRVKRQIREAYR 82
>gi|289642464|ref|ZP_06474609.1| ribonuclease P protein component [Frankia symbiont of Datisca
glomerata]
gi|289507723|gb|EFD28677.1| ribonuclease P protein component [Frankia symbiont of Datisca
glomerata]
Length = 155
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
L PRVGF V +K G AV RNR+RRRL+E VR + L G ++ A ++ EL
Sbjct: 51 LPPRVGFVVGRKVGNAVVRNRVRRRLREQVRARLDR-LPAGTLVIVRALPESATASSDEL 109
Query: 99 CNHFVERVRRNKRSYYSGKNFS 120
+R G +
Sbjct: 110 GRALERGLRGRLVPATPGTAGA 131
>gi|330752669|emb|CBL88134.1| ribonuclease P protein component [uncultured Cytophagia bacterium]
Length = 138
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 45 FTVTKK-QGCAVERNRMRRRLKEAVRLCAE--GVLKHGHDYVLIAKRDALFIPFKELCNH 101
+V KK AV RN+++R ++E R + G+ +I + F EL
Sbjct: 70 ISVPKKNHRTAVSRNKIKRIIREVYRKNKGIINISDQGYLMAII-YLGSSIPNFNELEVQ 128
Query: 102 FVERVRR 108
+ +R
Sbjct: 129 LINLFQR 135
>gi|299142116|ref|ZP_07035250.1| ribonuclease P protein component [Prevotella oris C735]
gi|298576578|gb|EFI48450.1| ribonuclease P protein component [Prevotella oris C735]
Length = 134
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
+ +E + + ++ +V KK AV+RNR++R+++EA RL + + D
Sbjct: 42 YMPMEAEDESQQLPRTQLLVSVPKKCFKRAVKRNRVKRQVREAYRLQRQILADKTAD 98
>gi|89255610|ref|YP_512971.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica LVS]
gi|115314115|ref|YP_762838.1| ribonuclease P [Francisella tularensis subsp. holarctica OSU18]
gi|167010125|ref|ZP_02275056.1| ribonuclease P [Francisella tularensis subsp. holarctica FSC200]
gi|224456467|ref|ZP_03664940.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254367005|ref|ZP_04983041.1| hypothetical protein FTHG_00179 [Francisella tularensis subsp.
holarctica 257]
gi|254368607|ref|ZP_04984623.1| hypothetical protein FTAG_01597 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370908|ref|ZP_04986913.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874230|ref|ZP_05246940.1| rnpA, ribonuclease P protein component [Francisella tularensis
subsp. tularensis MA00-2987]
gi|290953730|ref|ZP_06558351.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica URFT1]
gi|295312916|ref|ZP_06803637.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica URFT1]
gi|89143441|emb|CAJ78617.1| Ribonuclease P protein component [Francisella tularensis subsp.
holarctica LVS]
gi|115129014|gb|ABI82201.1| ribonuclease P [Francisella tularensis subsp. holarctica OSU18]
gi|134252831|gb|EBA51925.1| hypothetical protein FTHG_00179 [Francisella tularensis subsp.
holarctica 257]
gi|151569151|gb|EDN34805.1| hypothetical protein FTBG_00729 [Francisella tularensis subsp.
tularensis FSC033]
gi|157121510|gb|EDO65701.1| hypothetical protein FTAG_01597 [Francisella tularensis subsp.
holarctica FSC022]
gi|254840229|gb|EET18665.1| rnpA, ribonuclease P protein component [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158531|gb|ADA77922.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis NE061598]
Length = 117
Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTV--TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F+ + N + G V TKK A +RN RR +KE+ RL + L
Sbjct: 33 HFTFLLAKRNIKDP----GLCVILTKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSL 86
Query: 83 VLIAKRDALFIPFKELCNHFVE 104
++++K+ A +EL E
Sbjct: 87 IVLSKKTAAQATKEELWQSITE 108
>gi|88807551|ref|ZP_01123063.1| ribonuclease P protein component of ribozyme [Synechococcus sp. WH
7805]
gi|88788765|gb|EAR19920.1| ribonuclease P protein component of ribozyme [Synechococcus sp. WH
7805]
Length = 131
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 42 RVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R+ ++ K AV RNR+RR L + +R E +HG ++LI+ R L
Sbjct: 59 RIAVVISGKVHKRAVVRNRLRRLLHDHLRTRFEARPEHGQCWLLISLRPGADAGEANLLE 118
Query: 101 HFVERVRRN 109
+ +
Sbjct: 119 ECDRLLEQA 127
>gi|298387005|ref|ZP_06996559.1| ribonuclease P protein component [Bacteroides sp. 1_1_14]
gi|298260155|gb|EFI03025.1| ribonuclease P protein component [Bacteroides sp. 1_1_14]
Length = 129
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + + + +V+K+ AV+RNR++R+++E R + +L
Sbjct: 37 VVYMPIEQGEVPATILISVSKRRFKRAVKRNRVKRQIREVYRKNKQPLL 85
>gi|189464684|ref|ZP_03013469.1| hypothetical protein BACINT_01028 [Bacteroides intestinalis DSM
17393]
gi|189436958|gb|EDV05943.1| hypothetical protein BACINT_01028 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVRLCAEGV 75
G R F L V+ L V V+ ++ AV+RNR++R+++EA R G+
Sbjct: 23 GGARSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKRNRVKRQIREAYRKNKHGL 82
Query: 76 LKHGHD 81
L+ D
Sbjct: 83 LQALQD 88
>gi|187932216|ref|YP_001892201.1| ribonuclease P protein component [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187713125|gb|ACD31422.1| ribonuclease P protein component [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 117
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTV--TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F+ + N + G V TKK A +RN RR +KE+ RL + L
Sbjct: 33 HFTFLLAKRNIKDP----GLCVILTKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSL 86
Query: 83 VLIAKRDALFIPFKELCNHFVE 104
++++K+ A +EL E
Sbjct: 87 IVLSKKTAAQATKEELWQSITE 108
>gi|194323998|ref|ZP_03057773.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida FTE]
gi|194321895|gb|EDX19378.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida FTE]
Length = 133
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 48 TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
TKK A +RN RR +KE+ RL + L ++++K+ A +EL E
Sbjct: 69 TKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSLIVLSKKTAAQATKEELWQSITE 124
>gi|118496690|ref|YP_897740.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida U112]
gi|254372058|ref|ZP_04987551.1| hypothetical protein FTCG_01197 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254375204|ref|ZP_04990684.1| hypothetical protein FTDG_01395 [Francisella novicida GA99-3548]
gi|118422596|gb|ABK88986.1| ribonuclease P protein component [Francisella novicida U112]
gi|151569789|gb|EDN35443.1| hypothetical protein FTCG_01197 [Francisella novicida GA99-3549]
gi|151572922|gb|EDN38576.1| hypothetical protein FTDG_01395 [Francisella novicida GA99-3548]
Length = 117
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 48 TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
TKK A +RN RR +KE+ RL + L ++++K+ A +EL E
Sbjct: 53 TKKNIKKATKRNLCRRIIKESFRLHKD--LLDHKSLIVLSKKTAAQATKEELWQSITE 108
>gi|293605025|ref|ZP_06687419.1| flagellar assembly protein FliH [Achromobacter piechaudii ATCC
43553]
gi|292816574|gb|EFF75661.1| flagellar assembly protein FliH [Achromobacter piechaudii ATCC
43553]
Length = 247
Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 66 EAVRLCAEGVLKHGHDYVL----IAKRDA-LFIPFKELCNHFVERVRRNKRS 112
E +RL LK GH VL IA+ PF ++ R RR S
Sbjct: 185 ELIRLHLADELKEGHWRVLADESIARGGCRAETPFGDIDATLQTRWRRVAAS 236
>gi|126696723|ref|YP_001091609.1| ribonuclease P protein component [Prochlorococcus marinus str.
MIT 9301]
gi|254808075|sp|A3PE33|RNPA_PROM0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|126543766|gb|ABO18008.1| Bacterial ribonuclease P protein component [Prochlorococcus
marinus str. MIT 9301]
Length = 128
Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKE 66
R P L N++ RV ++KK AVERN++RR L+E
Sbjct: 36 RSNPGILL-THKLKNTSNKFRVAIAISKKVSKKAVERNKLRRILQE 80
>gi|167587878|ref|ZP_02380266.1| ribonuclease P protein component [Burkholderia ubonensis Bu]
Length = 111
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGH 80
R+ F + + R+G V KK AV RN ++R ++A RL G+
Sbjct: 5 RRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNLVKRLARDAFRLRRAEFA--GY 59
Query: 81 DYVL 84
D +L
Sbjct: 60 DLLL 63
>gi|29348636|ref|NP_812139.1| ribonuclease P [Bacteroides thetaiotaomicron VPI-5482]
gi|29340541|gb|AAO78333.1| putative ribonuclease P protein component [Bacteroides
thetaiotaomicron VPI-5482]
Length = 109
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + + + +V+K+ AV+RNR++R+++E R + +L
Sbjct: 17 VVYMPVEQGEVPATILISVSKRRFKRAVKRNRVKRQIREVYRKNKQPLL 65
>gi|317406227|gb|EFV86473.1| flagellar biosynthesis protein FliH [Achromobacter xylosoxidans
C54]
Length = 247
Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 66 EAVRLCAEGVLKHGHDYVL----IAKRDA-LFIPFKELCNHFVERVRRNKRS 112
E +RL LK GH VL IA+ PF ++ R RR S
Sbjct: 185 ELIRLHLADELKEGHWRVLADESIARGGCRAETPFGDIDATLQTRWRRVAAS 236
>gi|213964122|ref|ZP_03392362.1| ribonuclease P protein component [Capnocytophaga sputigena Capno]
gi|213953259|gb|EEB64601.1| ribonuclease P protein component [Capnocytophaga sputigena Capno]
Length = 125
Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 45 FTVTKKQGC-AVERNRMRRRLKEAVRL 70
+V K+ AV+RN ++RRL+EA RL
Sbjct: 54 ISVPKRTFKRAVDRNLLKRRLREAYRL 80
>gi|315225066|ref|ZP_07866883.1| ribonuclease P protein component [Capnocytophaga ochracea F0287]
gi|314944749|gb|EFS96781.1| ribonuclease P protein component [Capnocytophaga ochracea F0287]
Length = 126
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 45 FTVTKKQGC-AVERNRMRRRLKEAVRL 70
+V K+ AV RN ++RRL+E+ RL
Sbjct: 53 ISVPKRTFKRAVHRNLLKRRLRESYRL 79
>gi|298483300|ref|ZP_07001479.1| ribonuclease P protein component [Bacteroides sp. D22]
gi|298270617|gb|EFI12199.1| ribonuclease P protein component [Bacteroides sp. D22]
Length = 129
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ + + +V+K+ AV+RNR++R+++EA R
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKN 80
>gi|256819558|ref|YP_003140837.1| ribonuclease P protein component [Capnocytophaga ochracea DSM
7271]
gi|256581141|gb|ACU92276.1| ribonuclease P protein component [Capnocytophaga ochracea DSM
7271]
Length = 126
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 45 FTVTKKQGC-AVERNRMRRRLKEAVRL 70
+V K+ AV RN ++RRL+E+ RL
Sbjct: 53 ISVPKRTFKRAVHRNLLKRRLRESYRL 79
>gi|152980666|ref|YP_001355386.1| ribonuclease P protein component [Janthinobacterium sp.
Marseille]
gi|151280743|gb|ABR89153.1| ribonuclease P protein component [Janthinobacterium sp.
Marseille]
Length = 136
Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K +F+ V + +++ F L R+G K+ AV RN ++R
Sbjct: 14 RIVKTDEFSSVFRLRPVQRTAHFVLYT--RQTDLPHARLGVVAAKRFAPRAVTRNTIKRV 71
Query: 64 LKEAVRLCA 72
+E R A
Sbjct: 72 TRELFRQTA 80
>gi|167747236|ref|ZP_02419363.1| hypothetical protein ANACAC_01950 [Anaerostipes caccae DSM 14662]
gi|167653214|gb|EDR97343.1| hypothetical protein ANACAC_01950 [Anaerostipes caccae DSM 14662]
Length = 330
Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 19/110 (17%)
Query: 8 KKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPR-----VGFTVTKKQGCAVERNRMR 61
KR + K K + S V N++SN G+ RN +
Sbjct: 146 TKREEMERAAKALGYMKSTYGSFYVYGNHDSNQYREKPEYTSGY----------LRNTLE 195
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
K VR+ + V K G D +I ++DA K L + ++ R
Sbjct: 196 ---KAGVRVLEDEVFKTGKDICIIGRKDAGDRDRKSLKEIMKDAPEKSFR 242
>gi|253569021|ref|ZP_04846431.1| ribonuclease P [Bacteroides sp. 1_1_6]
gi|251841040|gb|EES69121.1| ribonuclease P [Bacteroides sp. 1_1_6]
Length = 129
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + + + +V+K+ AV+RNR++R+++E R + +L
Sbjct: 37 VVYMPVEQGEVPATILISVSKRRFKRAVKRNRVKRQIREVYRKNKQPLL 85
>gi|160884934|ref|ZP_02065937.1| hypothetical protein BACOVA_02924 [Bacteroides ovatus ATCC 8483]
gi|260172701|ref|ZP_05759113.1| ribonuclease P [Bacteroides sp. D2]
gi|262405663|ref|ZP_06082213.1| ribonuclease P protein component protein [Bacteroides sp. 2_1_22]
gi|294644397|ref|ZP_06722160.1| ribonuclease P protein component [Bacteroides ovatus SD CC 2a]
gi|294810390|ref|ZP_06769047.1| ribonuclease P protein component [Bacteroides xylanisolvens SD CC
1b]
gi|299145185|ref|ZP_07038253.1| ribonuclease P protein component [Bacteroides sp. 3_1_23]
gi|315920993|ref|ZP_07917233.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109969|gb|EDO11714.1| hypothetical protein BACOVA_02924 [Bacteroides ovatus ATCC 8483]
gi|262356538|gb|EEZ05628.1| ribonuclease P protein component protein [Bacteroides sp. 2_1_22]
gi|292640232|gb|EFF58487.1| ribonuclease P protein component [Bacteroides ovatus SD CC 2a]
gi|294442355|gb|EFG11165.1| ribonuclease P protein component [Bacteroides xylanisolvens SD CC
1b]
gi|298515676|gb|EFI39557.1| ribonuclease P protein component [Bacteroides sp. 3_1_23]
gi|313694868|gb|EFS31703.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 129
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ + + +V+K+ AV+RNR++R+++EA R
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKN 80
>gi|256838685|ref|ZP_05544195.1| ribonuclease P protein component [Parabacteroides sp. D13]
gi|256739604|gb|EEU52928.1| ribonuclease P protein component [Parabacteroides sp. D13]
Length = 128
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 36 NSNLLPRVGFTVT---KKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
+ R F V+ KK AV+RN ++R+++EA R+ +L+
Sbjct: 43 EEEMPARASFLVSVPKKKFKRAVKRNLIKRQVREAYRVRKYDLLEP 88
>gi|325268530|ref|ZP_08135160.1| ribonuclease P protein component [Prevotella multiformis DSM 16608]
gi|324989058|gb|EGC21011.1| ribonuclease P protein component [Prevotella multiformis DSM 16608]
Length = 141
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKH 78
AV+RNR++R+++EA R V++H
Sbjct: 76 AVKRNRVKRQIREAYRKHKHSVIRH 100
>gi|228473076|ref|ZP_04057833.1| ribonuclease P protein component [Capnocytophaga gingivalis ATCC
33624]
gi|228275658|gb|EEK14435.1| ribonuclease P protein component [Capnocytophaga gingivalis ATCC
33624]
Length = 125
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 45 FTVTKKQ-GCAVERNRMRRRLKEAVR 69
+V K+ AV+RNRM+R ++E+ R
Sbjct: 56 ISVPKRLMKKAVDRNRMKRLIRESYR 81
>gi|282879068|ref|ZP_06287828.1| ribonuclease P protein component [Prevotella buccalis ATCC 35310]
gi|281298802|gb|EFA91211.1| ribonuclease P protein component [Prevotella buccalis ATCC 35310]
Length = 103
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHD 81
+V+K+ AV+RNR++R+++EA R E V+ D
Sbjct: 29 SVSKRHFKRAVKRNRVKRQVREAYRQNKEIVVSSMAD 65
>gi|312886267|ref|ZP_07745881.1| ribonuclease P protein [Mucilaginibacter paludis DSM 18603]
gi|311301292|gb|EFQ78347.1| ribonuclease P protein [Mucilaginibacter paludis DSM 18603]
Length = 128
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 47 VTKK-QGCAVERNRMRRRLKEAVRL 70
V+K+ AV+RN ++RR++E RL
Sbjct: 52 VSKRRYKRAVDRNLIKRRMREVYRL 76
>gi|329944744|ref|ZP_08292823.1| ribonuclease P protein component-like protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328529880|gb|EGF56770.1| ribonuclease P protein component-like protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 96
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 35 NNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
VG V KK A RNR++RR++ A+ G L+ G V+ A
Sbjct: 8 RGDESPALVGVVVPKKQIPLATHRNRVKRRVR-ALMAQRVGGLEPGARVVVRGLAGADGA 66
Query: 94 PFKELCNHFVERVRRNKRS 112
+ L + R +
Sbjct: 67 DSRTLGRDLDRLLNRCRER 85
>gi|288803476|ref|ZP_06408908.1| ribonuclease P protein component [Prevotella melaninogenica D18]
gi|288334086|gb|EFC72529.1| ribonuclease P protein component [Prevotella melaninogenica D18]
Length = 141
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
V + +V +V KK AV+RNR++R+++EA R
Sbjct: 52 VSDKTAEEPNVQVLVSVPKKHFKRAVKRNRVKRQVREAYRKH 93
>gi|148240235|ref|YP_001225622.1| ribonuclease P protein component [Synechococcus sp. WH 7803]
gi|254808095|sp|A5GN10|RNPA_SYNPW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147848774|emb|CAK24325.1| Ribonuclease P protein component [Synechococcus sp. WH 7803]
Length = 131
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ L R+ ++ K AV RNR+RR L + +RL E H ++LI+
Sbjct: 46 IHGLLTQTQPHSCRIAVVISGKVHKRAVVRNRLRRLLHDHLRLRFEARSTHSDVWLLISL 105
Query: 88 RDALFIPFKELCNHFVERVRRN 109
R L +
Sbjct: 106 RPGADADEANLLEECDRLLEEA 127
>gi|330997186|ref|ZP_08321039.1| ribonuclease P protein component [Paraprevotella xylaniphila YIT
11841]
gi|329570981|gb|EGG52688.1| ribonuclease P protein component [Paraprevotella xylaniphila YIT
11841]
Length = 146
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Query: 46 TVTKK-QGCAVERNRMRRRLKEAVR 69
+V+K+ AV+RNR++R+++EA R
Sbjct: 58 SVSKRRFKRAVKRNRVKRQIREAYR 82
>gi|167834932|ref|ZP_02461815.1| ribonuclease P protein component [Burkholderia thailandensis
MSMB43]
Length = 112
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGH 80
R+ F + + R+G + KK AV RN ++R +EA R G
Sbjct: 5 RRSAHFVIYGKP---TGHEARLGLVIGKKYAARAVTRNLVKRLAREAFRTRRAEFA--GW 59
Query: 81 DYVL 84
D +L
Sbjct: 60 DILL 63
>gi|113954492|ref|YP_731299.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(protein C5) [Synechococcus sp. CC9311]
gi|113881843|gb|ABI46801.1| Ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Synechococcus sp. CC9311]
Length = 123
Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 42 RVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R ++ K AV RNR+RR L + +R E +H + ++LI+ + +
Sbjct: 53 RCAVVISSKVSKRAVIRNRLRRLLHDHLREHFERSFQHSNTWILISLKPGAEAKDAPVLE 112
Query: 101 HFVERVRRN 109
+++
Sbjct: 113 ECDRLLQQA 121
>gi|148241622|ref|YP_001226779.1| putative carboxyvinyl-carboxyphosphonate phosphorylmutase
[Synechococcus sp. RCC307]
gi|147849932|emb|CAK27426.1| Putative carboxyvinyl-carboxyphosphonate phosphorylmutase
[Synechococcus sp. RCC307]
Length = 294
Score = 33.6 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ + R G T K VER + R++ AV+ + G D V+IA+ DA
Sbjct: 115 EDQSSPKRCGHTGVKAV---VEREQALERIRAAVQAR-----EQGADLVIIARTDARSA 165
>gi|294505867|ref|YP_003569925.1| hypothetical protein SRM_00052 [Salinibacter ruber M8]
gi|294342195|emb|CBH22973.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 148
Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR-----LCAEGVLKHGHDYVLIAKRDALF 92
++ +VGF + VERNR+RR L+E R L V V+I R A
Sbjct: 63 DVPLQVGFAPGPRAESGVERNRIRRLLREVYRVHQYTLVDPFVCGPEALIVMILFRGAPE 122
Query: 93 IPFKELCNHFVERVRRNKRS 112
+ +RR S
Sbjct: 123 QADDGIGRDLPPALRRAAAS 142
>gi|255531447|ref|YP_003091819.1| ribonuclease P protein component [Pedobacter heparinus DSM 2366]
gi|255344431|gb|ACU03757.1| ribonuclease P protein component [Pedobacter heparinus DSM 2366]
Length = 139
Score = 33.6 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+ AV+RN ++RR++EA RL E L
Sbjct: 55 KRYKRAVDRNLIKRRIREAYRLQKEQEL 82
>gi|304382217|ref|ZP_07364724.1| ribonuclease P protein component [Prevotella marshii DSM 16973]
gi|304336574|gb|EFM02803.1| ribonuclease P protein component [Prevotella marshii DSM 16973]
Length = 127
Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLC 71
+ + ++ +V K+ AV+RNR++R+++EA R
Sbjct: 38 LVFLSIPRDEGEPRAKILVSVPKRYFKQAVKRNRVKRQIREAYRKH 83
>gi|317504616|ref|ZP_07962584.1| ribonuclease P protein component [Prevotella salivae DSM 15606]
gi|315664265|gb|EFV03964.1| ribonuclease P protein component [Prevotella salivae DSM 15606]
Length = 134
Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRL 70
+V KK AV+RNR++R+++EA RL
Sbjct: 62 SVPKKHFKRAVKRNRVKRQVREAYRL 87
>gi|310765877|gb|ADP10827.1| Ribonuclease P protein component [Erwinia sp. Ejp617]
Length = 52
Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++AK+ + L + RR+ R
Sbjct: 3 RESFRLRQHEL--PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCR 47
>gi|239948222|ref|ZP_04699975.1| ribonuclease P protein component [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922498|gb|EER22522.1| ribonuclease P protein component [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 118
Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNN-----SNLLPRVGFTVTKKQ-GCAV 55
+I LK +++F L+ K G+ +F L + + +G V+KK AV
Sbjct: 2 SITSLKNQKEFELINKFGKKFHKRYFILVIAKKLSKIFLEPKYNVFLGIKVSKKLNKKAV 61
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDY--VLIAKRDALFIPFKELCNHFVERV 106
RN+++RR++ +R+ + ++I ++ I F L + +
Sbjct: 62 VRNKIKRRIRHLIRIIVSDSSFKAIKFAMIIIPRKGFEEINFSHLNYELSKII 114
>gi|325860161|ref|ZP_08173286.1| ribonuclease P protein component [Prevotella denticola CRIS
18C-A]
gi|325482248|gb|EGC85256.1| ribonuclease P protein component [Prevotella denticola CRIS
18C-A]
Length = 140
Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 8 KKRRQFALVKKGELRKGPFFSLEVLNN------------NNSNLLPRVGFTVTKKQGC-A 54
KKR V G F L+ + ++ +V +V KK A
Sbjct: 17 KKRIDALFV-TGGSHAMTAFPLKAVYRLVDSEAAPSSPSADTEATVQVLVSVPKKHFKRA 75
Query: 55 VERNRMRRRLKEAVRLCAEGVLK 77
V+RNR++R+++EA R + +
Sbjct: 76 VKRNRVKRQVREAYRKHKSLITR 98
>gi|157867909|ref|XP_001682508.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68125962|emb|CAJ03910.1| hypothetical protein LMJF_18_1020 [Leishmania major strain
Friedlin]
Length = 1323
Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 52 GCAVERNRMRRRLKEA-VRLCAEGVLKHGHDYVLIAKRDALFI-------------PFKE 97
G VER R+R+R+++ RL L D VL A++ L +K
Sbjct: 311 GTLVERERLRQRIRDTRARLTHVDQLIARFDIVLAARQAELERLREKQAVIAQQAESYKS 370
Query: 98 LCNHFVERVRRNKRSYYSGKNF 119
VRR + +
Sbjct: 371 RAATTTREVRRLRERQHGQDEV 392
>gi|328675236|gb|AEB27911.1| Ribonuclease P protein component [Francisella cf. novicida 3523]
Length = 117
Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 26 FFSLEVLNNNNSNLLPRVGFTV--TKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F+ + N + G V TKK A +RN RR +KE+ RL + L
Sbjct: 33 HFTFLLAKRNIKDP----GLCVILTKKNIKKATKRNLCRRIVKESFRLHKD--LLDHKSL 86
Query: 83 VLIAKRDALFIPFKELCNHFVE 104
++++K+ A +EL E
Sbjct: 87 IVLSKKTAAQATKEELWQSITE 108
>gi|217970732|ref|YP_002355966.1| ribonuclease P protein component [Thauera sp. MZ1T]
gi|217508059|gb|ACK55070.1| ribonuclease P protein component [Thauera sp. MZ1T]
Length = 120
Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L K +++ V F + N R+G V KK A RN ++R
Sbjct: 16 RLHKTDEYSSVFAFRRALRGRFYMLHY-RPNGLDTARLGVVVAKKLAKRANVRNLVKRIA 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+E R + + D V+ E+
Sbjct: 75 REIFRR--QRIELPAMDLVVRLNAPVAKATRAEI 106
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.160 0.482
Lambda K H
0.267 0.0490 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,482,668,426
Number of Sequences: 14124377
Number of extensions: 103895950
Number of successful extensions: 373402
Number of sequences better than 10.0: 2010
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 952
Number of HSP's that attempted gapping in prelim test: 368755
Number of HSP's gapped (non-prelim): 3034
length of query: 123
length of database: 4,842,793,630
effective HSP length: 89
effective length of query: 34
effective length of database: 3,585,724,077
effective search space: 121914618618
effective search space used: 121914618618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 76 (33.6 bits)