BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780482|ref|YP_003064895.1| ribonuclease P [Candidatus
Liberibacter asiaticus str. psy62]
(123 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|302381829|ref|YP_003817652.1| ribonuclease P protein component [Brevundimonas subvibrioides ATCC
15264]
gi|302192457|gb|ADL00029.1| ribonuclease P protein component [Brevundimonas subvibrioides ATCC
15264]
Length = 138
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I L KR QF KG ++ L N+ + VGFT T+K G AV+RNR +
Sbjct: 5 PKIQRLTKRPQFLAAAKGVSLARGAVVVQRLERNDGDPAIGVGFTATRKVGGAVDRNRCK 64
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+EA R G DYVLIA++ + L + + R + G S
Sbjct: 65 RRLREAARAMVPLHGLPGSDYVLIARQGTADRSWDRLLDDVKSALTRL--ATTPGPGRSG 122
Query: 122 KS 123
K+
Sbjct: 123 KA 124
>gi|89053132|ref|YP_508583.1| ribonuclease P protein component [Jannaschia sp. CCS1]
gi|88862681|gb|ABD53558.1| ribonuclease P protein component [Jannaschia sp. CCS1]
Length = 132
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ L KR F L + P F L+ N ++ R+GFT +KK G AV RNR +
Sbjct: 22 PSLVTLTKRADFLLAARAARVPTPAFLLQARNRDDGTSDIRIGFTCSKKVGNAVARNRAK 81
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKR 111
RRL+E R G DYVLI ++DA FK + +R+ R
Sbjct: 82 RRLREIARAVLPTEGTPGWDYVLIGRKDATATHDFKAMQADLARALRKAHR 132
>gi|260577131|ref|ZP_05845108.1| ribonuclease P protein component [Rhodobacter sp. SW2]
gi|259020605|gb|EEW23924.1| ribonuclease P protein component [Rhodobacter sp. SW2]
Length = 144
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + I+ KR F + P F L+ N +S RVGFT +KK G AV RNR
Sbjct: 26 LPKLAIIGKRADFLRAASARRQGTPGFLLQARNRGDSQPGVRVGFTCSKKIGNAVARNRA 85
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKRSYYSGKN 118
+RRL+E R + + G DYVL+ + A FK L + + + +
Sbjct: 86 KRRLREVARAVLPKLAQPGWDYVLVGRPSATIARDFKALLADLATAMGQIHNAKPQARP 144
>gi|89068156|ref|ZP_01155573.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
gi|89046395|gb|EAR52452.1| Ribonuclease P protein component [Oceanicola granulosus HTCC2516]
Length = 130
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I L++R F +G + F L+ RVGFT +KK G AV RNR +RR
Sbjct: 22 IERLRERADFLAAARGRSKGTAGFHLQARRRPGGEGPARVGFTCSKKVGNAVARNRAKRR 81
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKR 111
L+E RL + G DYVLI +R A + PF ++ + R
Sbjct: 82 LREIARLELPAHGRPGWDYVLIGRRTATDVTPFAQMRADLAAALAEVHR 130
>gi|315122062|ref|YP_004062551.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495464|gb|ADR52063.1| ribonuclease P [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 142
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 93/123 (75%), Positives = 105/123 (85%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNI ILKK RQFALVKKGE RKGP+FSLEVLNNNN L R+GFTVTK+QGCAV RNR+
Sbjct: 20 MSNISILKKCRQFALVKKGESRKGPYFSLEVLNNNNPKGLSRIGFTVTKRQGCAVVRNRI 79
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKE VRLC++ +LK GHDYV++AKRD L +PFKELC HFVERVR NKR Y SGK FS
Sbjct: 80 RRRLKEVVRLCSKDILKPGHDYVIVAKRDTLLVPFKELCTHFVERVRYNKRLYRSGKIFS 139
Query: 121 RKS 123
R++
Sbjct: 140 RET 142
>gi|103485504|ref|YP_615065.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
gi|98975581|gb|ABF51732.1| ribonuclease P protein component [Sphingopyxis alaskensis RB2256]
Length = 240
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 50/110 (45%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F +G P F L V + + +G+TV+KK G AV RNRM+RR +
Sbjct: 131 TLNKRSEFLAANRGLRFPMPGFVLLVRPRGDDSDALGIGYTVSKKVGNAVTRNRMKRRFR 190
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
E R G D+VLI + A I F EL ++R +
Sbjct: 191 ELARALLPESGIAGADHVLIGRPGANDIAFAELGEQLDSALKRAAKKLAR 240
>gi|56695451|ref|YP_165799.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
gi|56677188|gb|AAV93854.1| ribonuclease P protein component [Ruegeria pomeroyi DSS-3]
Length = 141
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRM 60
S I +L+KR F + + ++ + RVGFT +KK G AV RNR
Sbjct: 27 SGISVLRKRSDFLKAARARRQGAGSMMVQARKRDAGEAEGIRVGFTCSKKVGNAVARNRA 86
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSY 113
+RRL+EA RL + + G DYVLI + PF L + +R+
Sbjct: 87 KRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDLRRALRKLHAPK 140
>gi|260427199|ref|ZP_05781178.1| ribonuclease P protein component [Citreicella sp. SE45]
gi|260421691|gb|EEX14942.1| ribonuclease P protein component [Citreicella sp. SE45]
Length = 144
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ L+KR F + + F L+ ++ + RVGFT +KK G AV RNR +
Sbjct: 31 PRLETLRKRPDFLSAARARRQPVGSFLLQARLRDDGDTTIRVGFTCSKKVGNAVARNRAK 90
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNK 110
RRL+E RL G+ + G DYVLI +R PF+ L +R+
Sbjct: 91 RRLREIARLTLPGLGQPGWDYVLIGRRVATSERPFELLRKDLKYALRKIH 140
>gi|146276127|ref|YP_001166286.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
gi|145554368|gb|ABP68981.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17025]
Length = 137
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 30 LRKRADFLRAAQARRQGTPGFLLQARRR-EAEGGIRVGFTCSKKVGNAVMRNRAKRRLRA 88
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRRNK 110
R G DYVL+ + A P+ L +R+
Sbjct: 89 LARELLTTRGHPGWDYVLVGRPGATIERPYAALLADLERALRQIH 133
>gi|197103857|ref|YP_002129234.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
gi|196477277|gb|ACG76805.1| ribonuclease P protein component [Phenylobacterium zucineum HLK1]
Length = 120
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I LKKR F K ++ + L R GFT TK+ G AV+RNR +RR
Sbjct: 6 IERLKKRADFLACAKAPSCAKGAVVVQARPRGDGAPLVRAGFTATKRIGGAVQRNRAKRR 65
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++EA RL + G DYV IA+ P+ L + + R + +
Sbjct: 66 MREAARLLLPEHARPGVDYVFIARGGVTTRPWARLLDDVKSALIRLAADREAPEG 120
>gi|56422032|ref|YP_149350.1| ribonuclease P [Geobacillus kaustophilus HTA426]
gi|261420906|ref|YP_003254588.1| ribonuclease P [Geobacillus sp. Y412MC61]
gi|297531690|ref|YP_003672965.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|319768576|ref|YP_004134077.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
gi|67461269|sp|Q5KU54|RNPA_GEOKA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56381874|dbj|BAD77782.1| ribonuclease P (protein component) [Geobacillus kaustophilus
HTA426]
gi|261377363|gb|ACX80106.1| ribonuclease P protein component [Geobacillus sp. Y412MC61]
gi|297254942|gb|ADI28388.1| ribonuclease P protein component [Geobacillus sp. C56-T3]
gi|317113442|gb|ADU95934.1| ribonuclease P protein component [Geobacillus sp. Y412MC52]
Length = 121
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNEEFQEVFQRGASTANRQFVIYTLDRPE-QPYFRIGLSVSKKLGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R +++ L + + G DYV+IA++ + + E+ + +R++ G+
Sbjct: 60 IKRYIRQCF-LELKEEIAPGKDYVVIARQPVAEMNYAEVKKSLIHVLRKSGGLKKGGQP 117
>gi|163745587|ref|ZP_02152947.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
gi|161382405|gb|EDQ06814.1| ribonuclease P protein component, putative [Oceanibulbus indolifex
HEL-45]
Length = 140
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKKQGCAVERNR 59
+ L KR F + + P F L++ RVGFT +KK G AV RNR
Sbjct: 25 RLETLTKRPDFQRASRAKRVATPGFILQMRPRREDEPSAAPIRVGFTCSKKVGNAVARNR 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYY 114
+RRL+E RL G DYV + +R+A + F +L + +
Sbjct: 85 AKRRLREIARLTLPQAGLAGMDYVFVGRREATAALSFDQLLADLTRALDILHGARK 140
>gi|254780482|ref|YP_003064895.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
gi|254040159|gb|ACT56955.1| ribonuclease P [Candidatus Liberibacter asiaticus str. psy62]
Length = 123
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM
Sbjct: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS
Sbjct: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
Query: 121 RKS 123
RKS
Sbjct: 121 RKS 123
>gi|99080153|ref|YP_612307.1| ribonuclease P protein component [Ruegeria sp. TM1040]
gi|99036433|gb|ABF63045.1| ribonuclease P protein component [Ruegeria sp. TM1040]
Length = 145
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR +F + + ++ + RVGFT +KK G AV RNR +RRL+E
Sbjct: 40 LTKRGEFLAAARARKQGTRSMMVQGRKRGD-EGSLRVGFTCSKKVGNAVTRNRAKRRLRE 98
Query: 67 AVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
RL + K G DYVLI + PF+++ F+ +R+
Sbjct: 99 IARLLLKEHGKPGWDYVLIGRAGETTTCPFEQMQKDFLYALRKLH 143
>gi|190890109|ref|YP_001976651.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|190695388|gb|ACE89473.1| ribonuclease P protein [Rhizobium etli CIAT 652]
gi|327192534|gb|EGE59486.1| ribonuclease P protein [Rhizobium etli CNPAF512]
Length = 133
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/118 (50%), Positives = 73/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|209547693|ref|YP_002279610.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209533449|gb|ACI53384.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 133
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 73/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHDYV++A+RD L FKEL RV + SG R
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVARRDVLEASFKELAAELKFRVETRPKPRRSGDGRPR 131
>gi|325291818|ref|YP_004277682.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
gi|325059671|gb|ADY63362.1| ribonuclease P protein component [Agrobacterium sp. H13-3]
Length = 139
Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 73/118 (61%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LK R F V+ GE R+G F LEVL+ PRVGFTVTK+QG AVERNRMRRRL
Sbjct: 21 GRLKNRSDFLAVQTGEKRRGGTFLLEVLDRKTPETEPRVGFTVTKRQGNAVERNRMRRRL 80
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
KEAVRL A +K GHDYV++A+RD L F +L + ER+ + S SRK
Sbjct: 81 KEAVRLSAGFAMKPGHDYVIVARRDVLETAFPKLQSLLTERIEGTAKPKRSQDTRSRK 138
>gi|116250223|ref|YP_766061.1| ribonuclease P [Rhizobium leguminosarum bv. viciae 3841]
gi|166226735|sp|Q1MM57|RNPA_RHIL3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115254871|emb|CAK05945.1| putative ribonuclease protein component [Rhizobium leguminosarum
bv. viciae 3841]
Length = 129
Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/118 (51%), Positives = 74/118 (62%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G FF LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 10 VGRLKSRPQFLAVREGEKRRGGFFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 70 LKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 127
>gi|86356095|ref|YP_467987.1| ribonuclease P [Rhizobium etli CFN 42]
gi|86280197|gb|ABC89260.1| ribonuclease P protein [Rhizobium etli CFN 42]
Length = 133
Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 58/118 (49%), Positives = 73/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L+ R QF V++GE R+G F LE+L+ + + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLRSRPQFLAVREGEKRRGGLFLLEILDRKDPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A +K GHDYV++A+RD L F+EL RV + G R
Sbjct: 74 LKEAVRLHAGFAMKPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRPGDGRPR 131
>gi|241202850|ref|YP_002973946.1| ribonuclease P [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240856740|gb|ACS54407.1| ribonuclease P protein component [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 133
Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/118 (50%), Positives = 72/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF ++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAAREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHDYV++A+RD L F+EL RV + SG R
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVARRDVLDASFQELAAELKSRVETRPKHRRSGDGRPR 131
>gi|237817391|ref|ZP_04596383.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
gi|237788204|gb|EEP62420.1| ribonuclease P protein component [Brucella abortus str. 2308 A]
Length = 184
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 48 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 107
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 108 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 167
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 168 GGKRRTER 175
>gi|217977384|ref|YP_002361531.1| ribonuclease P protein component [Methylocella silvestris BL2]
gi|217502760|gb|ACK50169.1| ribonuclease P protein component [Methylocella silvestris BL2]
Length = 150
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQGCAVERNRMR 61
LK+R F KG+ F+L+ + S+ PR GFTVTKK G AV RNR+R
Sbjct: 11 ARLKRRADFVRAAKGKRFHAKGFTLQAVERPESDRATAAPRFGFTVTKKVGGAVVRNRIR 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RR KEA+R + DYV++A+ +AL + F + + + + + S SR
Sbjct: 71 RRFKEALRTAEALPARPCRDYVVVARIEALRLAFATMQVELIRAIDKIESSQSKPDGRSR 130
Query: 122 K 122
K
Sbjct: 131 K 131
>gi|56552521|ref|YP_163360.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241762239|ref|ZP_04760321.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753819|ref|YP_003226712.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56544095|gb|AAV90249.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373286|gb|EER62905.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258553182|gb|ACV76128.1| ribonuclease P protein component [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 154
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +LK+R F +G+ P F L V + ++ N RVG+TVTKK G AV RNR++R
Sbjct: 46 RVAVLKRRADFLAANRGKRVAMPAFVLLVYHRHDDNPDMRVGYTVTKKTGNAVVRNRIKR 105
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R + V+ G D++LI +R A F +L + + R +R
Sbjct: 106 RFRALVQSLLPVGGVEGADHILIGRRAAFHGNFDDLYRQLSKALARMRR 154
>gi|222084729|ref|YP_002543258.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
gi|221722177|gb|ACM25333.1| ribonuclease P protein component [Agrobacterium radiobacter K84]
Length = 137
Score = 97.1 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 78/121 (64%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R QF V++GE RKG F +E L+ ++ PRVGFTVTKK G AVERNRMR
Sbjct: 16 KTVGRLKSRPQFLAVRQGEKRKGSLFLIEALDRKLTDAEPRVGFTVTKKHGNAVERNRMR 75
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A ++ GHDYV++A+R+ L F++L N V+R+ + + SR
Sbjct: 76 RRLKEAVRLHAGFAMQPGHDYVVVARREVLTASFEKLANELVQRIETRPKHRRPETDRSR 135
Query: 122 K 122
K
Sbjct: 136 K 136
>gi|126724916|ref|ZP_01740759.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
gi|126706080|gb|EBA05170.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2150]
Length = 136
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQGCAVERNRMRRR 63
LKKR F K F ++ + R+G+T +KK G AV RNR +RR
Sbjct: 25 LKKRADFLKAAKARRLVTNGFLIQARPRSEEEPPAPLIRIGYTCSKKVGNAVARNRAKRR 84
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSYY 114
L+E RL G DYVLI + PF ++ + + + + +
Sbjct: 85 LREIARLVIPHHGNPGWDYVLIGRAGKTADHPFDQMQQNLRDALLKLHGAKK 136
>gi|299820844|ref|ZP_07052733.1| ribonuclease P [Listeria grayi DSM 20601]
gi|299817865|gb|EFI85100.1| ribonuclease P [Listeria grayi DSM 20601]
Length = 133
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V K G+ F + +L +++ R+G +V+KK G AV RNR
Sbjct: 17 MKKAYRIKKNQEFQTVFKRGKSVANRQFVVYLLKQESADTHFRIGLSVSKKIGNAVCRNR 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++++ V GHDY++IA+ A + F E+ ++ + +
Sbjct: 77 VKRYIRQSFHELEGEVA-SGHDYIIIARNPAANMSFHEVKKSLTHVLKLARVLRKT 131
>gi|225629471|ref|ZP_03787504.1| ribonuclease P protein component [Brucella ceti str. Cudo]
gi|225615967|gb|EEH13016.1| ribonuclease P protein component [Brucella ceti str. Cudo]
Length = 184
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 48 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 107
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 108 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 167
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 168 GGKRRTER 175
>gi|149914929|ref|ZP_01903458.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
gi|149811117|gb|EDM70954.1| DNA gyrase subunit A [Roseobacter sp. AzwK-3b]
Length = 133
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L +R F + + + P ++ + + RVGFT +KK G AV RNR +RR
Sbjct: 22 LQTLVERADFLRAARAQWKAMPSMVVQARDRKDGEATVRVGFTCSKKVGNAVARNRAKRR 81
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNKRSYY 114
L+E R + G DYVLI + + PF+ L + +
Sbjct: 82 LREVARAVLPDAARPGWDYVLIGRANVTGALPFETLKSDLRTALTHLHNKTK 133
>gi|163733762|ref|ZP_02141204.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
gi|161392873|gb|EDQ17200.1| ribonuclease P protein component, putative [Roseobacter litoralis
Och 149]
Length = 137
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S RVGFT +KK G AV RNR
Sbjct: 23 SGLTRITKRSDFLRAARAPRVVTPGFILQMRKRTPSEAEGIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+E RL + G DYV I + ++ F +L + + + ++
Sbjct: 83 KRRLREIARLTLTDHGQQGVDYVFIGRAKETAQRSFSQLMDDLGVALDKLHKAPR 137
>gi|126733908|ref|ZP_01749655.1| ribonuclease P protein component [Roseobacter sp. CCS2]
gi|126716774|gb|EBA13638.1| ribonuclease P protein component [Roseobacter sp. CCS2]
Length = 186
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-LPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR F + P L+ RVGFT +KK G AV RNR +RRL+
Sbjct: 80 LTKRADFVRASNARRQGTPGIHLQGRKRAEGEAAGIRVGFTCSKKVGNAVARNRAKRRLR 139
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
E R+ + G DYVL+ ++D +PF +L +++
Sbjct: 140 EVARIVLPEMGLDGWDYVLVGRKDITATLPFDQLIADMRRAMKKVH 185
>gi|150395308|ref|YP_001325775.1| ribonuclease P [Sinorhizobium medicae WSM419]
gi|150026823|gb|ABR58940.1| ribonuclease P protein component [Sinorhizobium medicae WSM419]
Length = 132
Score = 94.8 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ K SRKS
Sbjct: 74 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIE-IKPKQKRPPAGSRKS 132
>gi|296534913|ref|ZP_06897227.1| ribonuclease P protein component [Roseomonas cervicalis ATCC 49957]
gi|296264761|gb|EFH11072.1| ribonuclease P protein component [Roseomonas cervicalis ATCC 49957]
Length = 125
Score = 94.4 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M++ LK+RR+F V KG P L+ L + RVGFT TKK G AV RNR
Sbjct: 1 MASPPRLKRRREFLRVAGKGSRAARPSLVLQAL--PETAGPLRVGFTATKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RRL+EA RL G D VLI + F +L +R
Sbjct: 59 AKRRLREAARLLLGQDAPPGWDLVLIGREGTGGRRFDQLLADLRGALR 106
>gi|294675906|ref|YP_003576521.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
gi|294474726|gb|ADE84114.1| ribonuclease P [Rhodobacter capsulatus SB 1003]
Length = 162
Score = 94.4 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN----LLPRVGFTVTKKQGCAVER 57
I IL+KR F + P F L+ ++ L RVGFT +KK G AV R
Sbjct: 28 RTILILRKRADFLRAASAQRMSAPGFLLQARKRGEADTAAADLIRVGFTCSKKLGNAVAR 87
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYY 114
NR +RRL+E RL + G DYVL+ + +A F L V +
Sbjct: 88 NRAKRRLREVARLGLPALGLPGWDYVLVGRPEATASRDFAALQADLVRAITEIHAGRS 145
>gi|163814990|ref|ZP_02206377.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
gi|158449673|gb|EDP26668.1| hypothetical protein COPEUT_01143 [Coprococcus eutactus ATCC 27759]
Length = 155
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS + LK R+F V + + +N R+G +V+KK G +V R+R
Sbjct: 43 MSKVISLKNSREFGSVYNTRNSVANKYLVMY--LRSNGLDYNRLGISVSKKVGNSVVRHR 100
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER--VRRN 109
+ R ++EA RL + G+D V++A+ + +++ + + +++
Sbjct: 101 VTRLIREAYRLNRANID-VGYDIVIVARPASKDKKCQDIESALMHLCGLKKI 151
>gi|326793320|ref|YP_004311141.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
gi|326544084|gb|ADZ85943.1| ribonuclease P protein component [Clostridium lentocellum DSM 5427]
Length = 112
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +F V KG+ + + NN R+G +V+KK G +V R+R
Sbjct: 1 MKYAQSLKKNYEFRTVYRKGKSLANKYLVVYRYKNNLPEN--RLGISVSKKVGNSVVRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL E + K G D+V+IA+ A ++++ N + ++++K
Sbjct: 59 VTRLIRESYRLNEEFIDKEGWDFVVIARSAANGASYQDISNALINLLKQHK 109
>gi|197302266|ref|ZP_03167325.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
gi|197298697|gb|EDY33238.1| hypothetical protein RUMLAC_00993 [Ruminococcus lactaris ATCC
29176]
Length = 111
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G+ + ++ N + RVG +V+KK G +V R+
Sbjct: 1 MKFSESLKKNRDFQYVYKNGKSYANKCLVMYIIPNEQNKN--RVGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL +E + G+D V+IA+ A + E+ N +
Sbjct: 59 LTRLIRESYRL-SEEHFQCGYDIVVIARTSAKEKSYHEIENALIHL 103
>gi|229542317|ref|ZP_04431377.1| ribonuclease P protein component [Bacillus coagulans 36D1]
gi|229326737|gb|EEN92412.1| ribonuclease P protein component [Bacillus coagulans 36D1]
Length = 114
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K G+ F + VL N R+G +V+KK G AV+RN+
Sbjct: 1 MRKSYRIKKNTEFQEVFKHGKSFANRQFVVYVLEKEN-RKHFRIGLSVSKKLGNAVKRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++ L + + G+DY++IA++ A + + E+ + ++ S
Sbjct: 60 IKRYIRQVF-LELKEDIPPGYDYIIIARKPAAEMNYHEVKKSLIHVLKIAHVLKKS 114
>gi|110678775|ref|YP_681782.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
gi|109454891|gb|ABG31096.1| ribonuclease P protein component, putative [Roseobacter
denitrificans OCh 114]
Length = 137
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERNRM 60
S + + KR F + P F L++ S+ RVGFT +KK G AV RNR
Sbjct: 23 SRLTQITKRADFLRAARAPRAVTPGFILQMRRRPASDAAVIRVGFTCSKKVGNAVARNRA 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSYY 114
+RRL+E RL G DYV I + + PF L + + +
Sbjct: 83 KRRLREIARLILPEKGLPGVDYVFIGRANTTAQRPFPLLMQDLATALDKLHTAAR 137
>gi|52788050|ref|YP_093879.1| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52350552|gb|AAU43186.1| RnpA [Bacillus licheniformis ATCC 14580]
Length = 134
Score = 93.7 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 16 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 74
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 75 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 133
Query: 120 S 120
S
Sbjct: 134 S 134
>gi|67461278|sp|Q5LW06|RNPA_SILPO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 125
Score = 93.7 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRM 60
S I +L+KR F + + ++ + RVGFT +KK G AV RNR
Sbjct: 11 SGISVLRKRSDFLKAARARRQGAGSMMVQARKRDAGEAEGIRVGFTCSKKVGNAVARNRA 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSY 113
+RRL+EA RL + + G DYVLI + PF L + +R+
Sbjct: 71 KRRLREAARLVLPDMGRPGWDYVLIGRPSDTASRPFDGLLDDLRRALRKLHAPK 124
>gi|255262795|ref|ZP_05342137.1| ribonuclease P [Thalassiobium sp. R2A62]
gi|255105130|gb|EET47804.1| ribonuclease P [Thalassiobium sp. R2A62]
Length = 133
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK R +F K + P F+L+ RVGFT +KK G AV RNR +RRL+
Sbjct: 27 LKNRSEFIAASKAQRVSSPSFNLQARPRQAGEADGIRVGFTCSKKVGNAVARNRAKRRLR 86
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRNK 110
E RL + G+DYVL+ + F+ L + + +
Sbjct: 87 EIARLVLPSAGRDGYDYVLVGRPGTTAARNFEALLDDLRRALEKVH 132
>gi|288554604|ref|YP_003426539.1| ribonuclease P [Bacillus pseudofirmus OF4]
gi|288545764|gb|ADC49647.1| ribonuclease P [Bacillus pseudofirmus OF4]
Length = 120
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F+ V K G+ F L L R+G +V+KK G AV RNR
Sbjct: 1 MKKEQRIKKNEDFSSVFKKGQSVANRQFVLYSLKK-EGQASFRIGLSVSKKVGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++ + + + G+D+V+IA+ + F ++ + +++ +
Sbjct: 60 IKRYVRTVFQTYQDEL-PGGYDFVIIARHPVSEMDFHQVESSLKHVMKKARLLKKVDHTS 118
Query: 120 SR 121
+
Sbjct: 119 QK 120
>gi|307301343|ref|ZP_07581105.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
gi|307318013|ref|ZP_07597450.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306896415|gb|EFN27164.1| ribonuclease P protein component [Sinorhizobium meliloti AK83]
gi|306903799|gb|EFN34386.1| ribonuclease P protein component [Sinorhizobium meliloti BL225C]
Length = 132
Score = 93.3 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ K SRKS
Sbjct: 74 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIEN-KPKQKRPPAGSRKS 132
>gi|329117793|ref|ZP_08246510.1| ribonuclease P protein component [Streptococcus parauberis NCFD
2020]
gi|326908198|gb|EGE55112.1| ribonuclease P protein component [Streptococcus parauberis NCFD
2020]
Length = 121
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G F + LN R+G +V K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFDGGESTANRKFVIYFLNEKEDQNHFRLGISVGKRLGNAVTRNA 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + +E + D+V+IA++ + ++E+ + ++
Sbjct: 61 VKRKIRHVIMEFSESLKP--TDFVIIARKGVEELEYQEVRQNLKHVLKLAH 109
>gi|254476732|ref|ZP_05090118.1| ribonuclease P [Ruegeria sp. R11]
gi|214030975|gb|EEB71810.1| ribonuclease P [Ruegeria sp. R11]
Length = 151
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQGCAVERNRMRRRLK 65
KRR F + + ++ N + R+GFT +KK G AV RNR +RRL+
Sbjct: 44 KRRDFLAAARARRQGTKGMMVQGRNRRSDEPGGDGIRMGFTCSKKVGNAVARNRAKRRLR 103
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
E R+ + G DYVLI + PF+EL + +++
Sbjct: 104 EVARMILPLHGRAGWDYVLIGRAGQTADRPFEELKRDLIYALKKIH 149
>gi|126463481|ref|YP_001044595.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
gi|126105145|gb|ABN77823.1| ribonuclease P protein component [Rhodobacter sphaeroides ATCC
17029]
Length = 137
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 30 LRKRADFLRAAQARRQGTPGFLLQARRR-EAEGGIRVGFTCSKKVGNAVLRNRAKRRLRA 88
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
R G DYVL+ + A + P+ L +R+
Sbjct: 89 IARAVLTLQGHAGWDYVLVGRPGATVERPYAALLADLERALRQIH 133
>gi|84499793|ref|ZP_00998081.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
gi|84392937|gb|EAQ05148.1| ribonuclease P protein component [Oceanicola batsensis HTCC2597]
Length = 117
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +++R F + + ++ + + RVGFT +KK G AV RNR +RR
Sbjct: 10 LQTMRRRADFLACARARRQGTKGMLVQGRDRGE-DAGIRVGFTCSKKVGNAVARNRAKRR 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIA-KRDALFIPFKELCNHFVERVRRNKR 111
L+E RL + G DYVLI + PF++L F+ +R+ R
Sbjct: 69 LREVARLLLPDHGRPGWDYVLIGNRDATADRPFEDLKADFLHALRKLHR 117
>gi|294501990|ref|YP_003565690.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|295707341|ref|YP_003600416.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
gi|294351927|gb|ADE72256.1| ribonuclease P protein component [Bacillus megaterium QM B1551]
gi|294805000|gb|ADF42066.1| ribonuclease P protein component [Bacillus megaterium DSM 319]
Length = 117
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K G+ F L VL+ + RVGF+V KK G AV RNR
Sbjct: 1 MKKRYRIKKNDEFQTVFKKGKSVANRQFVLYVLDKPDQEHF-RVGFSVGKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R K+ + + K DY++IA++ A + ++E+ + +R K + +
Sbjct: 60 VKRLAKQIMFEFTPYL-KQDKDYIVIARQPAATMSYEEIKSSLQHVFKRGKLLTHRQND 117
>gi|83854928|ref|ZP_00948458.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
gi|83842771|gb|EAP81938.1| ribonuclease P protein component [Sulfitobacter sp. NAS-14.1]
Length = 136
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F + P F L++ RVGFT +KK G AV RNR +
Sbjct: 18 RVQTLKNRPDFQRASRAPRVAMPGFILQMRKRAAGEADGIRVGFTCSKKVGNAVARNRAK 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RRL+E RL + G DYVL+ + DA +PF +L + F + + SG
Sbjct: 78 RRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQSDFTKALGILHGKQRSGTKK 136
>gi|77464641|ref|YP_354145.1| ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332559534|ref|ZP_08413856.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
gi|77389059|gb|ABA80244.1| Ribonuclease P protein component [Rhodobacter sphaeroides 2.4.1]
gi|332277246|gb|EGJ22561.1| ribonuclease P protein component [Rhodobacter sphaeroides WS8N]
Length = 137
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 30 LRKRADFLRAAQARRQGTPGFLLQARRR-EAEGGIRVGFTCSKKVGNAVLRNRAKRRLRA 88
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
R G DYVL+ + A + P+ L +R+
Sbjct: 89 IARAVLTVQGHAGWDYVLVGRPGATVERPYAALLADLERALRQIH 133
>gi|83941452|ref|ZP_00953914.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
gi|83847272|gb|EAP85147.1| ribonuclease P protein component [Sulfitobacter sp. EE-36]
Length = 136
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F + P F L++ RVGFT +KK G AV RNR +
Sbjct: 18 RVQTLKNRPDFQRASRAPRVAMPGFILQMRKRAAGEADGIRVGFTCSKKVGNAVARNRAK 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RRL+E RL + G DYVL+ + DA +PF +L + F + + SG
Sbjct: 78 RRLREVARLTLPHEGRDGMDYVLVGRSDATASLPFDKLQSDFTKALGILHGKQRSGSKK 136
>gi|221640553|ref|YP_002526815.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
gi|221161334|gb|ACM02314.1| Ribonuclease P protein component [Rhodobacter sphaeroides KD131]
Length = 137
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + P F L+ + RVGFT +KK G AV RNR +RRL+
Sbjct: 30 LRKRADFLRAAQARRQGTPGFLLQARRR-EAEGGIRVGFTCSKKVGNAVLRNRAKRRLRA 88
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
R G DYVL+ + A + P+ L +R+
Sbjct: 89 IARAVLTLQGHAGWDYVLVGRPGATVERPYPALLADLERALRQIH 133
>gi|254467228|ref|ZP_05080639.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
gi|206688136|gb|EDZ48618.1| ribonuclease P protein component [Rhodobacterales bacterium Y4I]
Length = 141
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ KRR F + + ++ N + + R+GFT +KK G AV RNR
Sbjct: 29 PKLEVMAKRRDFLACARPPALKQGTKGMMVQGRNRQD-DGGIRMGFTCSKKVGNAVARNR 87
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNK 110
+RRL+EA R+ + G DYVLI + + PF+EL + +++
Sbjct: 88 AKRRLREAARMILPVHGRPGWDYVLIGRADETAQRPFEELKRDLIYALKKIH 139
>gi|84685366|ref|ZP_01013264.1| ribonuclease P protein component [Maritimibacter alkaliphilus
HTCC2654]
gi|84666523|gb|EAQ12995.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2654]
Length = 134
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F + P F L+ + + + + RVG+T +KK G AV RNR +RR
Sbjct: 25 LETLKKRPDFLACARARKAPAPAFLLQGRDRRDDDTVVRVGYTASKKVGNAVARNRAKRR 84
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
L+E R + G DYVL+A+ + F + + R
Sbjct: 85 LREIARAVIADEGRAGWDYVLVARPGSTVDRDFDAMTTDLRAALARVH 132
>gi|16125021|ref|NP_419585.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|221233744|ref|YP_002516180.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
gi|21542224|sp|Q9AA39|RNPA_CAUCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808056|sp|B8H1E9|RNPA_CAUCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13422005|gb|AAK22753.1| ribonuclease P protein component [Caulobacter crescentus CB15]
gi|220962916|gb|ACL94272.1| ribonuclease P protein component [Caulobacter crescentus NA1000]
Length = 149
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L+KR F L K +++ + + RVGFT TKK G AVERNR +R
Sbjct: 9 KFERLRKRPDFLLAAKAPALSRGAVFIQMRQRTDDDPTVRVGFTATKKIGGAVERNRAKR 68
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF-SR 121
RL+EA RL + HDYV IA+ + L + + G SR
Sbjct: 69 RLREAARLVLPLHARPSHDYVFIARGGTGTREWARLLDDVKTALISLAADLDRGGTKVSR 128
Query: 122 KS 123
+S
Sbjct: 129 RS 130
>gi|144899248|emb|CAM76112.1| Bacterial ribonuclease P protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 140
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGCA 54
+ LKKR F V + + P L+V + R+GFT +KK G +
Sbjct: 5 LARLKKRPDFLRVAGQRKKWAAPGLILQVAPRPDGPPDMPAQEADAIRIGFTCSKKVGNS 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
V RNR RRRLK AV + + G DYV+I +R+ + + L ++R
Sbjct: 65 VARNRARRRLKAAVDELFPALARPGLDYVVIGRRETVDRAYSLLLQDLRTALKRV 119
>gi|86135815|ref|ZP_01054394.1| ribonuclease P protein component [Roseobacter sp. MED193]
gi|85826689|gb|EAQ46885.1| ribonuclease P protein component [Roseobacter sp. MED193]
Length = 146
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRR 62
+ +L KR +F + + ++ RVGFT +KK G AV RNR +R
Sbjct: 37 LVVLSKRSEFLAAARARRQGTKSMMVQGRQRKEGEAEGFRVGFTCSKKVGNAVARNRAKR 96
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
RL+EA RL G+ + G DYVLI + +A F++L +++
Sbjct: 97 RLREAARLVLPGIGRDGWDYVLIGRAEATASRGFEDLKRDLAYAIKKIH 145
>gi|89101260|ref|ZP_01174081.1| ribonuclease P [Bacillus sp. NRRL B-14911]
gi|89084025|gb|EAR63205.1| ribonuclease P [Bacillus sp. NRRL B-14911]
Length = 124
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F K G+ F + L R+G +V+KK G AV RN+
Sbjct: 1 MKKEFRVKKNKEFQEAFKKGKSFANRQFVIYALKK-TGQEHFRIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++A + +DYV+IA++ + F E+ N ++ K G +
Sbjct: 60 IKRYVRQAFHELDASIHNE-YDYVIIARKPVADMGFHEIKNSLSHVLKVGKVLRGPGHHR 118
Query: 120 SRK 122
R+
Sbjct: 119 DRQ 121
>gi|311032254|ref|ZP_07710344.1| ribonuclease P [Bacillus sp. m3-13]
Length = 117
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V KG+ F + + ++ L R+G +V+KK G AV RNR
Sbjct: 1 MRKEQRIKKNKEFQHVFQKGKSMANRQFVIYAVQKSD-QPLFRIGLSVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++AV E + G D V+IA++ A + F+E+ +++
Sbjct: 60 IKRLVRQAVHEIKEQL-PGGVDIVVIARKPAADMSFEEVKKSLQHVIKKL 108
>gi|159184284|ref|NP_353416.2| ribonuclease P [Agrobacterium tumefaciens str. C58]
gi|22001934|sp|Q8UIB2|RNPA_AGRT5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159139610|gb|AAK86201.2| ribonuclease P protein component [Agrobacterium tumefaciens str.
C58]
Length = 127
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 76/121 (62%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LK R +F V+ GE R+G F +EVL+ PRVGFTVTK+QG AVERNRMR
Sbjct: 6 KQPGRLKNRSEFLAVQAGEKRRGSTFLVEVLDRRAPETEPRVGFTVTKRQGNAVERNRMR 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A +K GHDYV++A+RD L F +L + +ER+ + S + SR
Sbjct: 66 RRLKEAVRLSAGVAMKPGHDYVIVARRDVLDTAFPKLQSLLIERIEGTAKPKRSQETRSR 125
Query: 122 K 122
K
Sbjct: 126 K 126
>gi|218675210|ref|ZP_03524879.1| ribonuclease P [Rhizobium etli GR56]
Length = 133
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/118 (50%), Positives = 72/118 (61%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKNRPQFLAVREGEKRRGGLFLLEVLDRREPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
LKEAVRL A ++ GHD V++A+RD L F+EL RV + SG R
Sbjct: 74 LKEAVRLHAGFAMQPGHDDVVVARRDVLKASFQELAAELKLRVETRPKHRRSGDGRPR 131
>gi|15964198|ref|NP_384551.1| ribonuclease P [Sinorhizobium meliloti 1021]
gi|21263951|sp|Q92SF4|RNPA_RHIME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15073374|emb|CAC41882.1| Probable ribonuclease P protein component (protein C5)
[Sinorhizobium meliloti 1021]
Length = 128
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V+ GE R+GP F LEVL+ N+ RVGFTVTKK G AVERNRMRRR
Sbjct: 10 VGRLKSRPQFLAVRAGESRRGPLFLLEVLDRNDPEGEARVGFTVTKKHGNAVERNRMRRR 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
LKEAVRL A +K GHDYV++A+RD L PF L +R+ K SRKS
Sbjct: 70 LKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRALRDRIEN-KPKQKRPPAGSRKS 128
>gi|227820670|ref|YP_002824640.1| ribonuclease P [Sinorhizobium fredii NGR234]
gi|227339669|gb|ACP23887.1| ribonuclease P protein component [Sinorhizobium fredii NGR234]
Length = 128
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/120 (50%), Positives = 72/120 (60%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S + LK R QF V+ GE RKGP F LEVL+ + RVGFTVTKK G AVERNRMR
Sbjct: 8 STVGRLKSRPQFLAVRAGEARKGPHFLLEVLDRKDPEGEARVGFTVTKKHGNAVERNRMR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVRL A +K GHDYV++A+RD L PF L +R+ + +
Sbjct: 68 RRLKEAVRLSAGFAMKPGHDYVIVARRDLLNAPFDALTRGLQDRIENKPKPKRPPAGSRK 127
>gi|56965877|ref|YP_177611.1| ribonuclease P [Bacillus clausii KSM-K16]
gi|60390295|sp|Q5WAG0|RNPA_BACSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56912123|dbj|BAD66651.1| ribonuclease P protein component [Bacillus clausii KSM-K16]
Length = 122
Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F+ V KG F L VL R+G +V+K+ G AV RNR
Sbjct: 1 MKKEQRIKKNREFSAVFKKGSSMANRQFVLYVLPK-EGQDRLRLGLSVSKRVGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++ A + + DYV+IA+ A + FKE+ + +++ K N
Sbjct: 60 IKRLVRAAFHELEGQL-RPDCDYVVIARNPARDLSFKEVRSSLEHVMKKAKVLAPLYGNR 118
Query: 120 SRKS 123
+ S
Sbjct: 119 KKDS 122
>gi|114770130|ref|ZP_01447668.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
gi|114548967|gb|EAU51850.1| ribonuclease P protein component [alpha proteobacterium HTCC2255]
Length = 133
Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ + KR F + F L+ N N+ + RVGFT +KK G AV RNR +RR
Sbjct: 25 VKRITKRSDFIQASHAKRLGVKGFLLQARNRNDDDQTIRVGFTCSKKVGNAVARNRAKRR 84
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKR 111
L+E L K G DYVLI K++ F +L N +++ +
Sbjct: 85 LREITNLILISSAKKGWDYVLIGKKEVTASRDFIKLKNDLTYALQKIHK 133
>gi|229917457|ref|YP_002886103.1| ribonuclease P [Exiguobacterium sp. AT1b]
gi|259494107|sp|C4KZZ5|RNPA_EXISA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229468886|gb|ACQ70658.1| ribonuclease P protein component [Exiguobacterium sp. AT1b]
Length = 114
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F V + G F + L + ++ RVG +V+KK G AVERNR
Sbjct: 1 MKKEYRLQKNEEFQAVFREGRSVANRQFVVYTLKADQTH--FRVGLSVSKKLGNAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
M+R ++E++RL V + DYV+IA++ A + E+ +R K G+
Sbjct: 59 MKRLMRESLRLLEPNVAPN--DYVIIARKPATALTQSEVTESLKHVFKRAKVWQKQGR 114
>gi|90962706|ref|YP_536622.1| ribonuclease P [Lactobacillus salivarius UCC118]
gi|227891667|ref|ZP_04009472.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|301300477|ref|ZP_07206676.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122448382|sp|Q1WRF9|RNPA_LACS1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|90821900|gb|ABE00539.1| Ribonuclease P protein component [Lactobacillus salivarius UCC118]
gi|227866470|gb|EEJ73891.1| ribonuclease P [Lactobacillus salivarius ATCC 11741]
gi|300851924|gb|EFK79609.1| ribonuclease P protein component [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 113
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G+ F + +L + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKEAEFQTVFTQGQSCANRQFVVYMLEKPDQKHF-RVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + K D+++IA+ ++ E+ H ++ K
Sbjct: 60 VKRRIRQSLTELKPQL-KQDCDFLVIARPTVAYMSMAEVKEHLKHVLKLAK 109
>gi|114569010|ref|YP_755690.1| ribonuclease P protein component [Maricaulis maris MCS10]
gi|114339472|gb|ABI64752.1| ribonuclease P protein component [Maricaulis maris MCS10]
Length = 189
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN---------NSNLLPRVGFTVTKKQ 51
+ + LK RR+F KG ++ + + + GFT T+K
Sbjct: 56 LPTVKRLKTRREFLQAAKGRKAVRSGVVIQARSRDGSLLLGADEKAPAHIGAGFTATRKI 115
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV RNR +RRL+E RL + G DYV IA+ + L +
Sbjct: 116 GGAVIRNRAKRRLREIARLLLPLHGQPGIDYVFIARATTPERDWSRLVGDVESALVSLAN 175
Query: 112 SYYSGKNFSR 121
SG +
Sbjct: 176 GKTSGDREHK 185
>gi|254419734|ref|ZP_05033458.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
gi|196185911|gb|EDX80887.1| ribonuclease P protein component [Brevundimonas sp. BAL3]
Length = 134
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 49/119 (41%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L +R QF KG ++ L + + VGFT T+K G AV RNR +R
Sbjct: 6 QIKRLLRRPQFLAAAKGVSEARGGVVIQRLERGDGSPHIGVGFTATRKIGGAVVRNRAKR 65
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RL+EA R G DYV IA+ + L + + R + +R
Sbjct: 66 RLREAARAMLPVHGLPGSDYVFIARMGTTERAWDRLLDDVKSTLTRLATPKADRPSPAR 124
>gi|259416985|ref|ZP_05740905.1| ribonuclease P [Silicibacter sp. TrichCH4B]
gi|259348424|gb|EEW60201.1| ribonuclease P [Silicibacter sp. TrichCH4B]
Length = 106
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ KR F + + ++ + + RVGFT +KK G AV RNR +RRL+E
Sbjct: 1 MTKRGDFLAAARARKQGTRSMMVQGRKRGD-DGPLRVGFTCSKKVGNAVMRNRAKRRLRE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
RL + K G DYVLI + PF+++ F +R+
Sbjct: 60 IARLLLKEHGKPGWDYVLIGRAGETTTCPFEQMQKDFAYALRKIH 104
>gi|300024926|ref|YP_003757537.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
gi|299526747|gb|ADJ25216.1| ribonuclease P protein component [Hyphomicrobium denitrificans ATCC
51888]
Length = 154
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKKQGCAVERNR 59
+ LK R +F V+ G P F +EV + R GFT+TKK G AV RNR
Sbjct: 19 PTLQTLKSRPEFLAVRGGRRSSTPAFLIEVRERPATENGGTARFGFTITKKIGNAVTRNR 78
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK---RSYYSG 116
+RRRLK A AEG + DYV++A+ AL PF L + SG
Sbjct: 79 IRRRLKAAFAATAEGRARPSCDYVIVARHAALDRPFAALLEDVARAFAALHDNAKRSRSG 138
Query: 117 KNFSR 121
+ R
Sbjct: 139 EARPR 143
>gi|315498838|ref|YP_004087642.1| ribonuclease p protein component [Asticcacaulis excentricus CB 48]
gi|315416850|gb|ADU13491.1| ribonuclease P protein component [Asticcacaulis excentricus CB 48]
Length = 112
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LK R F K + P ++ N+ + R+GFT TKK G +VERNR +RR++E
Sbjct: 6 LKNRSDFLAANKAAYQARPTVVIQARFRNDGDETIRIGFTATKKTGGSVERNRAKRRMRE 65
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
A R + GHDYV IA+ ++ L + + R
Sbjct: 66 AARTLLPDHGRPGHDYVFIARDATKSCTWQGLLDDVKRALIRLSPK 111
>gi|138897070|ref|YP_001127523.1| ribonuclease P [Geobacillus thermodenitrificans NG80-2]
gi|166226719|sp|A4ITX4|RNPA_GEOTN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134268583|gb|ABO68778.1| Ribonuclease P protein component [Geobacillus thermodenitrificans
NG80-2]
Length = 121
Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G F + L+ R+G +V+KK G AV RN+
Sbjct: 1 MKKKYRIKKNEEFQEVFRRGVSTANRQFVVYTLDRPE-QPYFRIGLSVSKKLGKAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R +++ E V+ G DYV+IA++ + + E+ + +R+ G+
Sbjct: 60 IKRYVRQCFLELKEEVV-PGKDYVIIARQPVAEMGYAEVKKSLLHVLRKAGGLKKRGRT 117
>gi|229142236|ref|ZP_04270760.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
gi|228641254|gb|EEK97561.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST26]
Length = 119
Score = 91.0 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 118
>gi|312113263|ref|YP_004010859.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
gi|311218392|gb|ADP69760.1| ribonuclease P protein component [Rhodomicrobium vannielii ATCC
17100]
Length = 132
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-SNLLPRVGFTVT-----------KKQ 51
+ LK R +F V+KG P F ++ L + + PR GFTV+ +K+
Sbjct: 1 METLKTRAEFKRVQKGRKWVTPAFIMQGLARADIESQGPRFGFTVSGKSVAVEGEGGRKR 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV+RNR RRRLKEAVRL + DYV+I + AL F++L + +
Sbjct: 61 GKAVDRNRARRRLKEAVRLTFAEAARPNLDYVIIGRAVALTRKFEDLLADMRRAFHKVGQ 120
Query: 112 SYYSGKNFS 120
S K +
Sbjct: 121 PARSDKENN 129
>gi|126737061|ref|ZP_01752796.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
gi|126721646|gb|EBA18349.1| ribonuclease P protein component [Roseobacter sp. SK209-2-6]
Length = 141
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+L KRR F + + + ++ LN +S RVGFT +KK G AV RNR
Sbjct: 29 QKPEVLAKRRDFLACARPPAQKQGTKGMMVQGLNRRDS-GGIRVGFTCSKKVGNAVARNR 87
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRNKRS 112
+RRL+EA R+ + G DYVLI + + PF+EL V +R+
Sbjct: 88 AKRRLREAARMILPVHGRTGWDYVLIGRANETAQRPFEELKRDLVYALRKIHAK 141
>gi|225377583|ref|ZP_03754804.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans DSM
16841]
gi|225210559|gb|EEG92913.1| hypothetical protein ROSEINA2194_03233 [Roseburia inulinivorans DSM
16841]
Length = 111
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G+ + + VL N+ R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNRDFQNVYKKGKSYANRYLVMYVLENDTDRN--RLGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER--VRRNKR 111
+ R ++E+ RL E + D V+IA+ A I + E+ + + + + +
Sbjct: 59 VTRLIRESYRL-QEDMFNSSLDIVVIARNTAKDISYHEVESALLHLGGLHKILK 111
>gi|222147366|ref|YP_002548323.1| ribonuclease P [Agrobacterium vitis S4]
gi|221734356|gb|ACM35319.1| ribonuclease P protein component [Agrobacterium vitis S4]
Length = 129
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 73/121 (60%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R QF V+ GE RKG + LEVL+ + PRVGFTVTKK G AVERNRMR
Sbjct: 8 KTVGRLKSRPQFLAVRVGEKRKGRYILLEVLDRAEPDTPPRVGFTVTKKHGNAVERNRMR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRLKEAVR A ++ GHDYV++A+RD L PF EL + R++ SR
Sbjct: 68 RRLKEAVRTGAGFAMQPGHDYVIVARRDVLSAPFGELRDVLQRRIQEKSNVRRQDTARSR 127
Query: 122 K 122
K
Sbjct: 128 K 128
>gi|229087977|ref|ZP_04220082.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
gi|228695334|gb|EEL48214.1| Ribonuclease P protein component [Bacillus cereus Rock3-44]
Length = 119
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + L R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAE-QPYFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|331092110|ref|ZP_08340941.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402311|gb|EGG81882.1| ribonuclease P protein component [Lachnospiraceae bacterium
2_1_46FAA]
Length = 130
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F +V K G+ + + N R+G +V+KK G +V R+R
Sbjct: 1 MQFSESLKKNRDFQIVYKRGKSYANKYLVMY--KKPNGLNKNRIGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+ RL + + G+D V+I + A + E+ + + + +
Sbjct: 59 LTRLIRESYRLQESKM-QCGYDIVVIVRASANGKSYGEMDSALIHLAKLHH 108
>gi|148556517|ref|YP_001264099.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
gi|148501707|gb|ABQ69961.1| ribonuclease P protein component [Sphingomonas wittichii RW1]
Length = 106
Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L++R F G P F L V +++ + R+G TVTKK G AV RNR++RR +
Sbjct: 2 LQRRADFLAANGGRRAPMPGFVLLVRPRGDNDPVMRLGITVTKKIGNAVVRNRVKRRFRA 61
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R G D+VLI + + F +L ++ + + R
Sbjct: 62 LARELLPVAGIAGADHVLIGRAGGVERDFAQLRAELLKALGKIAR 106
>gi|261216464|ref|ZP_05930745.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
gi|260918071|gb|EEX84932.1| ribonuclease P protein component [Brucella abortus bv. 3 str.
Tulya]
Length = 145
Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 129 GGKRRTER 136
>gi|240145744|ref|ZP_04744345.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|257202160|gb|EEV00445.1| ribonuclease P protein component [Roseburia intestinalis L1-82]
gi|291536992|emb|CBL10104.1| ribonuclease P protein component [Roseburia intestinalis M50/1]
gi|291539804|emb|CBL12915.1| ribonuclease P protein component [Roseburia intestinalis XB6B4]
Length = 112
Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V + G+ + + VL N+ R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNSDFQKVYRQGKSYANRYLVMYVLENHTEGN--RLGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL + +G D V+IA+ A I + E + +
Sbjct: 59 LTRLIRESYRLHE-DMFNNGLDIVVIARSTARDISYHETESALLHL 103
>gi|167766866|ref|ZP_02438919.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|317499292|ref|ZP_07957565.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711414|gb|EDS21993.1| hypothetical protein CLOSS21_01383 [Clostridium sp. SS2/1]
gi|291558406|emb|CBL37206.1| ribonuclease P protein component [butyrate-producing bacterium
SSC/2]
gi|316893461|gb|EFV15670.1| ribonuclease P [Lachnospiraceae bacterium 5_1_63FAA]
Length = 112
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N L+ R+F +V G + + L N+ R+G +V+KK G +V R+R
Sbjct: 1 MKNYHSLRNNREFQMVYNEGNSKANRYLVLYYRKNDLEYN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
R ++E+ RL + + K G+D V+IA++ A + + + F+ + +
Sbjct: 59 TTRLIRESYRLNQDNL-KTGYDMVVIARQTAKGQNYHTIESAFLHLIDLHHLKKS 112
>gi|228988716|ref|ZP_04148801.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229159047|ref|ZP_04287103.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|229199689|ref|ZP_04326332.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228583784|gb|EEK41959.1| Ribonuclease P protein component [Bacillus cereus m1293]
gi|228624466|gb|EEK81237.1| Ribonuclease P protein component [Bacillus cereus ATCC 4342]
gi|228771028|gb|EEM19509.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 119
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|149182292|ref|ZP_01860771.1| ribonuclease P [Bacillus sp. SG-1]
gi|148849984|gb|EDL64155.1| ribonuclease P [Bacillus sp. SG-1]
Length = 123
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K G F + L+ + R+G +V+KK G AV RN+
Sbjct: 1 MRKEQRVKKNIEFQEVFKKGTSIANRQFVVYKLHKED-QQYFRIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ L + +K+ +DYV+IA++ A + F E+ + ++++K S +
Sbjct: 60 IKRYIRQVF-LELKDEVKNNYDYVIIARKPAADMDFHEIKKSMIHVLKKSKALRVSQQTQ 118
Query: 120 SRK 122
+ K
Sbjct: 119 TDK 121
>gi|312865637|ref|ZP_07725861.1| ribonuclease P protein component [Streptococcus downei F0415]
gi|311098758|gb|EFQ56978.1| ribonuclease P protein component [Streptococcus downei F0415]
Length = 150
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ + F ++ +G+ F + L S RVG +V+KK G AV RNR
Sbjct: 40 LKKTYRVKRNQDFQVIFGQGKSVANRKFVVYSLEK--SQKHFRVGLSVSKKLGNAVVRNR 97
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R+L+ + A + HD+V+IA++ + ++E+ + +
Sbjct: 98 IKRKLRHVLMELAPFLTT--HDFVVIARKGVEELNYQEVKQNLRHVL 142
>gi|65317468|ref|ZP_00390427.1| COG0594: RNase P protein component [Bacillus anthracis str. A2012]
gi|118480514|ref|YP_897665.1| ribonuclease P [Bacillus thuringiensis str. Al Hakam]
gi|228918099|ref|ZP_04081627.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930493|ref|ZP_04093493.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936767|ref|ZP_04099558.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949209|ref|ZP_04111477.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094598|ref|ZP_04225665.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|229124990|ref|ZP_04254164.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|229187716|ref|ZP_04314852.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|118419739|gb|ABK88158.1| ribonuclease P protein component [Bacillus thuringiensis str. Al
Hakam]
gi|228595784|gb|EEK53468.1| Ribonuclease P protein component [Bacillus cereus BGSC 6E1]
gi|228658491|gb|EEL14157.1| Ribonuclease P protein component [Bacillus cereus 95/8201]
gi|228688845|gb|EEL42676.1| Ribonuclease P protein component [Bacillus cereus Rock3-42]
gi|228810492|gb|EEM56845.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228822976|gb|EEM68817.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829212|gb|EEM74849.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841579|gb|EEM86695.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 123
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIKSSVR 122
>gi|323341097|ref|ZP_08081345.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
gi|323091518|gb|EFZ34142.1| ribonuclease P protein component [Lactobacillus ruminis ATCC 25644]
Length = 121
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V +G+ F + ++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKEAEFQKVFTQGKSCANKQFVVYMIEKPK-QPHFRVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + K D+++IA+ F+ E+ H + + K
Sbjct: 60 VKRRIRQSLTELKPQL-KQDCDFIVIARPGVAFMSTAEVKQHLIHVLHLAK 109
>gi|226315532|ref|YP_002775428.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
gi|254808054|sp|C0ZA70|RNPA_BREBN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226098482|dbj|BAH46924.1| ribonuclease P protein component [Brevibacillus brevis NBRC 100599]
Length = 126
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK QF V +G F L R G +V+KK G AV RNR
Sbjct: 1 MHRSHRLKKNEQFQAVFQRGSSAANKQFVLYSAK-QEGQAAFRAGISVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++EAV + G D V+IA+ + + + + ++R K + +
Sbjct: 60 VKRLIREAVARMESDI-PVGLDLVIIARPGVEAMTLEAIEQSLLHVMKRAKVIKQAPVHN 118
Query: 120 SRK 122
++
Sbjct: 119 GKR 121
>gi|229035145|ref|ZP_04189091.1| Ribonuclease P protein component [Bacillus cereus AH1271]
gi|228728211|gb|EEL79241.1| Ribonuclease P protein component [Bacillus cereus AH1271]
Length = 119
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M +KK +F V + + + R+G +V+KK G AV RNR+
Sbjct: 5 MKKTHRIKKNDEFQTVFQKGKSNANRQLVVYQLDKAEQPNFRIGLSVSKKIGNAVVRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 65 KRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 118
>gi|116874194|ref|YP_850975.1| ribonuclease P [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466740|sp|A0AMG4|RNPA_LISW6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116743072|emb|CAK22196.1| ribonuclease P protein component [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 119
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELEDQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|319648517|ref|ZP_08002733.1| RnpA protein [Bacillus sp. BT1B_CT2]
gi|317389596|gb|EFV70407.1| RnpA protein [Bacillus sp. BT1B_CT2]
Length = 123
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 5 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 64 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 122
Query: 120 S 120
S
Sbjct: 123 S 123
>gi|258512907|ref|YP_003186341.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479633|gb|ACV59952.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 120
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK R F V KG+ L +N RVGF++++K G AV RNR
Sbjct: 1 MQSQHRLKDSRDFRRVFRKGKSFASGRLVLYYCDNR--VARVRVGFSISRKVGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK-RSYYSGKN 118
++R L+ + + + D V++ + +A F +L +++ + +G
Sbjct: 59 LKRLLRAIFQRQLDELCHRPVDIVVVCRANAADADFHDLEREVERLLKKAQLLPQEAGDE 118
Query: 119 FS 120
Sbjct: 119 RP 120
>gi|163739497|ref|ZP_02146907.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
gi|161387250|gb|EDQ11609.1| putative inner membrane protein translocase component YidC
[Phaeobacter gallaeciensis BS107]
Length = 150
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNL---LPRVGFTVTKKQGCAVERNRMRRRLK 65
KRR F + + ++ + + R+GFT +KK G AV RNR +RRL+
Sbjct: 43 KRRDFLAAARARRQGTKGMMVQGRKRHADDPVGDGIRMGFTCSKKVGNAVARNRAKRRLR 102
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRS 112
R+ + G DYVLI + PF +L N + +++
Sbjct: 103 GVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKNDLIYALKKIHGK 150
>gi|228924232|ref|ZP_04087503.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835450|gb|EEM80820.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 119
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQAITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|297585592|ref|YP_003701372.1| ribonuclease P protein component [Bacillus selenitireducens MLS10]
gi|297144049|gb|ADI00807.1| ribonuclease P protein component [Bacillus selenitireducens MLS10]
Length = 120
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K G+ F + + N+ + R G +++KK G AV RNR
Sbjct: 1 MKKEHRLRKNEDFQTVFKHGKSVANRQFVVYTFDRNDQD-PSRFGLSISKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +KE +R L G D V+IA++ + F ++ R
Sbjct: 60 IKRLVKEVIR-HQLDHLPLGQDVVIIARKPVATMDFHDVNKSIHHVFR 106
>gi|172059051|ref|YP_001815511.1| ribonuclease P [Exiguobacterium sibiricum 255-15]
gi|229890167|sp|B1YGB0|RNPA_EXIS2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171991572|gb|ACB62494.1| ribonuclease P protein component [Exiguobacterium sibiricum 255-15]
Length = 116
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V +G F + L R+G +V+KK G AV RN+
Sbjct: 1 MKKEYRVKKDKEFQAVFTRGASVANRQFVVYALKK-EQQTHFRIGLSVSKKIGNAVVRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++EA +L + +D+V+IA+ A + +E+ + +R+
Sbjct: 60 VKRYVREACQLHEASLA-PNYDFVIIARNPAAKMTAQEVADSLRHVFKRSGVWKRQ 114
>gi|228994206|ref|ZP_04154106.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
gi|229003009|ref|ZP_04160868.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228758237|gb|EEM07423.1| Ribonuclease P protein component [Bacillus mycoides Rock1-4]
gi|228765658|gb|EEM14312.1| Ribonuclease P protein component [Bacillus pseudomycoides DSM
12442]
Length = 119
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + L R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAE-QSYFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRMIRQSIAELKDEID-SGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|320547571|ref|ZP_08041856.1| ribonuclease P protein component [Streptococcus equinus ATCC 9812]
gi|320447646|gb|EFW88404.1| ribonuclease P protein component [Streptococcus equinus ATCC 9812]
Length = 119
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F L L N S+ RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGSSVANRKFVLYHLEKNQSHY--RVGLSVSKKLGNAVTRNN 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + ++ D+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVIMELSPNLINQ--DFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|229148037|ref|ZP_04276376.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
gi|228635462|gb|EEK91953.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST24]
Length = 119
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M +KK +F V + + + R+G +V+KK G AV RNR+
Sbjct: 5 MKKKHRIKKNDEFQAVFQNGKSNANRQFVVYQLDKEEQPNFRIGLSVSKKIGNAVVRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 65 KRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|154503052|ref|ZP_02040112.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
gi|153796293|gb|EDN78713.1| hypothetical protein RUMGNA_00874 [Ruminococcus gnavus ATCC 29149]
Length = 111
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + L + N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQVVYKNGKSYANRYLVLYIRENGMDKN--RLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQCGFDLVVIARAGAKERSYHDIESALIHL 103
>gi|228995395|ref|ZP_04155067.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
gi|228764348|gb|EEM13223.1| Ribonuclease P protein component [Bacillus mycoides Rock3-17]
Length = 119
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + L R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQNGKSNANRQFVVYQLEKAE-QSYFRIGLSVSKKLGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + +++L + +R+
Sbjct: 64 IKRVIRQSIAELKDEID-SGKDFVIIARKPCADMTYEQLKKSLIHAFKRS 112
>gi|206975830|ref|ZP_03236741.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217962979|ref|YP_002341557.1| ribonuclease P [Bacillus cereus AH187]
gi|226736855|sp|B7HZH3|RNPA_BACC7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206745924|gb|EDZ57320.1| ribonuclease P protein component [Bacillus cereus H3081.97]
gi|217063398|gb|ACJ77648.1| ribonuclease P protein component [Bacillus cereus AH187]
gi|324329438|gb|ADY24698.1| ribonuclease P [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 115
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 114
>gi|62317851|ref|YP_223704.1| ribonuclease P [Brucella abortus bv. 1 str. 9-941]
gi|83269830|ref|YP_419121.1| ribonuclease P [Brucella melitensis biovar Abortus 2308]
gi|256015781|ref|YP_003105790.1| ribonuclease P [Brucella microti CCM 4915]
gi|260545086|ref|ZP_05820907.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260756234|ref|ZP_05868582.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260760397|ref|ZP_05872745.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260763637|ref|ZP_05875969.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260882058|ref|ZP_05893672.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261322755|ref|ZP_05961952.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261753968|ref|ZP_05997677.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|265985156|ref|ZP_06097891.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|265992580|ref|ZP_06105137.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|265998999|ref|ZP_05464621.2| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|297249213|ref|ZP_06932914.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
gi|62198044|gb|AAX76343.1| RnpA, ribonuclease P, protein component [Brucella abortus bv. 1
str. 9-941]
gi|82940104|emb|CAJ13151.1| Bacterial ribonuclease P protein [Brucella melitensis biovar
Abortus 2308]
gi|255998441|gb|ACU50128.1| ribonuclease P [Brucella microti CCM 4915]
gi|260098357|gb|EEW82231.1| ribonuclease P protein component [Brucella abortus NCTC 8038]
gi|260670715|gb|EEX57655.1| ribonuclease P protein component [Brucella abortus bv. 4 str. 292]
gi|260674058|gb|EEX60879.1| ribonuclease P protein component [Brucella abortus bv. 2 str.
86/8/59]
gi|260676342|gb|EEX63163.1| ribonuclease P protein component [Brucella abortus bv. 6 str. 870]
gi|260871586|gb|EEX78655.1| ribonuclease P protein component [Brucella abortus bv. 9 str. C68]
gi|261298735|gb|EEY02232.1| ribonuclease P protein component [Brucella neotomae 5K33]
gi|261743721|gb|EEY31647.1| ribonuclease P protein component [Brucella suis bv. 3 str. 686]
gi|262763450|gb|EEZ09482.1| ribonuclease P protein component [Brucella melitensis bv. 3 str.
Ether]
gi|263091778|gb|EEZ16109.1| ribonuclease P protein component [Brucella melitensis bv. 2 str.
63/9]
gi|264663748|gb|EEZ34009.1| ribonuclease P protein component [Brucella sp. 83/13]
gi|297173082|gb|EFH32446.1| ribonuclease P protein component [Brucella abortus bv. 5 str.
B3196]
Length = 145
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 129 GGKRRTER 136
>gi|299541767|ref|ZP_07052090.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
gi|298725505|gb|EFI66146.1| ribonuclease P [Lysinibacillus fusiformis ZC1]
Length = 114
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KG+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFLVK-EGQTEFRVGLSVSKKLGNAVTRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R +++++ + + K DYV+IA+ A + F E+ +R K
Sbjct: 60 VKRYIRQSIHELKDDL-KPNMDYVIIARHPAATMDFHEVKQSLQHVLRIAKVMKK 113
>gi|205371914|ref|ZP_03224734.1| ribonuclease P [Bacillus coahuilensis m4-4]
Length = 118
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F + KGE F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKEQRVKKNREFQEIFNKGESFANRQFVIYKLQTQGEDPY-RLGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++++ L + +K G+DYV+IA++ A F E + ++R K
Sbjct: 60 IKRYIRQSF-LELKDEIKPGYDYVIIARKPAADFTFFETKSSLTHVMKRADVLKRKEK 116
>gi|254696032|ref|ZP_05157860.1| ribonuclease P [Brucella abortus bv. 3 str. Tulya]
Length = 141
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGHDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 GGKRRTER 132
>gi|84517255|ref|ZP_01004610.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
gi|84508930|gb|EAQ05392.1| ribonuclease P protein component [Loktanella vestfoldensis SKA53]
Length = 130
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNN-NNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +L KR F + P L+ RVGFT +KK G AV RNR +R
Sbjct: 21 LTVLTKRADFVRASHALRQGTPGIHLQARERARGEAAGIRVGFTCSKKVGNAVARNRAKR 80
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
RL+E R + G DYVL+ + D +PF L +R+
Sbjct: 81 RLREVARQVLPEQGRDGWDYVLVGRHDVTASLPFDALVADLRRALRKVH 129
>gi|171779010|ref|ZP_02920018.1| hypothetical protein STRINF_00893 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282368|gb|EDT47793.1| hypothetical protein STRINF_00893 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 119
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F L L N S+ RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGTSVANRKFVLYHLEKNQSHY--RVGLSVSKKLGNAVTRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + +L D+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVIMELSPNLLNQ--DFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|295690946|ref|YP_003594639.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
gi|295432849|gb|ADG12021.1| ribonuclease P protein component [Caulobacter segnis ATCC 21756]
Length = 149
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L+KR F L K +++ ++ + + RVGFT TKK G AVERNR +R
Sbjct: 11 RFERLRKRADFLLAAKAPALSRGAVFIQMRKRSDEDPVVRVGFTATKKIGGAVERNRAKR 70
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RL+EA RL + HDYV IA+ + L + +
Sbjct: 71 RLREAARLVLPLHARPSHDYVFIARGGTGSREWGRLLDDVKSAL 114
>gi|75765125|ref|ZP_00744402.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228905431|ref|ZP_04069386.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
gi|228911327|ref|ZP_04075131.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228942636|ref|ZP_04105168.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228955737|ref|ZP_04117732.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228968639|ref|ZP_04129622.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228975566|ref|ZP_04136118.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982202|ref|ZP_04142491.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|229072952|ref|ZP_04206148.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|74487388|gb|EAO51327.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228710198|gb|EEL62176.1| Ribonuclease P protein component [Bacillus cereus F65185]
gi|228777554|gb|EEM25832.1| Ribonuclease P protein component [Bacillus thuringiensis Bt407]
gi|228784176|gb|EEM32203.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791068|gb|EEM38686.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228803965|gb|EEM50589.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817062|gb|EEM63155.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228848345|gb|EEM93195.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 200]
gi|228854251|gb|EEM98954.1| Ribonuclease P protein component [Bacillus thuringiensis IBL 4222]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|157694478|ref|YP_001488940.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194016429|ref|ZP_03055043.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
gi|166991075|sp|A8FJG3|RNPA_BACP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157683236|gb|ABV64380.1| ribonuclease P [Bacillus pumilus SAFR-032]
gi|194011902|gb|EDW21470.1| ribonuclease P protein component [Bacillus pumilus ATCC 7061]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +F V KG+ F + L+ N + R+G +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEEFQKVFKKGQSMANRQFVIYQLDQPNQDE-LRLGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ + K DY++IA++ A + F+E R++ K
Sbjct: 60 IKRLIRQVFLEEGHKL-KQEKDYIVIARKPASELTFEETKKSLQHLFRKSAVYQQQPKKS 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|229181733|ref|ZP_04309056.1| Ribonuclease P protein component [Bacillus cereus 172560W]
gi|228601766|gb|EEK59264.1| Ribonuclease P protein component [Bacillus cereus 172560W]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIKR 119
>gi|254830710|ref|ZP_05235365.1| ribonuclease P [Listeria monocytogenes 10403S]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGLNHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|16804892|ref|NP_466377.1| ribonuclease P [Listeria monocytogenes EGD-e]
gi|46909043|ref|YP_015432.1| ribonuclease P [Listeria monocytogenes serotype 4b str. F2365]
gi|47093224|ref|ZP_00230997.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|47097240|ref|ZP_00234802.1| ribonuclease P protein component [Listeria monocytogenes str. 1/2a
F6854]
gi|224503079|ref|ZP_03671386.1| ribonuclease P [Listeria monocytogenes FSL R2-561]
gi|226225404|ref|YP_002759511.1| ribonuclease P protein component [Listeria monocytogenes Clip81459]
gi|254824782|ref|ZP_05229783.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|254827422|ref|ZP_05232109.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|254899688|ref|ZP_05259612.1| ribonuclease P [Listeria monocytogenes J0161]
gi|254913109|ref|ZP_05263121.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|254930871|ref|ZP_05264230.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|255520072|ref|ZP_05387309.1| ribonuclease P [Listeria monocytogenes FSL J1-175]
gi|284800258|ref|YP_003412123.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284993443|ref|YP_003415211.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|300763387|ref|ZP_07073385.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|21263942|sp|Q8Y3I1|RNPA_LISMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390484|sp|Q71VQ7|RNPA_LISMF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494111|sp|C1L0I8|RNPA_LISMC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16412355|emb|CAD01068.1| ribonuclease P protein component [Listeria monocytogenes EGD-e]
gi|46882316|gb|AAT05609.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. F2365]
gi|47014395|gb|EAL05366.1| ribonuclease P protein component [Listeria monocytogenes str. 1/2a
F6854]
gi|47018418|gb|EAL09178.1| ribonuclease P protein component [Listeria monocytogenes str. 4b
H7858]
gi|225877866|emb|CAS06581.1| ribonuclease P protein component [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258599800|gb|EEW13125.1| ribonuclease P protein component [Listeria monocytogenes FSL
N3-165]
gi|284055820|gb|ADB66761.1| ribonuclease P [Listeria monocytogenes 08-5578]
gi|284058910|gb|ADB69849.1| ribonuclease P [Listeria monocytogenes 08-5923]
gi|293582416|gb|EFF94448.1| ribonuclease P protein component [Listeria monocytogenes HPB2262]
gi|293591111|gb|EFF99445.1| ribonuclease P protein [Listeria monocytogenes J2818]
gi|293594021|gb|EFG01782.1| ribonuclease P protein component [Listeria monocytogenes FSL
J1-194]
gi|300515664|gb|EFK42713.1| ribonuclease P protein component [Listeria monocytogenes FSL
N1-017]
gi|332313284|gb|EGJ26379.1| Ribonuclease P protein component [Listeria monocytogenes str. Scott
A]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|229176163|ref|ZP_04303655.1| Ribonuclease P protein component [Bacillus cereus MM3]
gi|228607322|gb|EEK64652.1| Ribonuclease P protein component [Bacillus cereus MM3]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M +KK +F V + + + R+G +V+KK G AV RNR+
Sbjct: 5 MKKKYRIKKNDEFQTVFQKGKSNANRQLVVYQLDKGEQPNFRIGLSVSKKIGNAVVRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 65 KRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 118
>gi|226326144|ref|ZP_03801662.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
gi|225205686|gb|EEG88040.1| hypothetical protein COPCOM_03963 [Coprococcus comes ATCC 27758]
Length = 114
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V KG+ + + +L N+ RVG +V+KK G ++ R+
Sbjct: 1 MKFSESLKKNRDFQSVYRKGKPYGNKYLVMYLLANDLGRN--RVGISVSKKVGNSIIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A + E+ + +
Sbjct: 59 LTRLIRESYRLHEEQ-FQCGYDIVIIARTTAKDRSYHEIESALIHL 103
>gi|30023511|ref|NP_835142.1| ribonuclease P [Bacillus cereus ATCC 14579]
gi|228961751|ref|ZP_04123354.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229051156|ref|ZP_04194700.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|229112900|ref|ZP_04242431.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|229130733|ref|ZP_04259686.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|229153646|ref|ZP_04281822.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|229193738|ref|ZP_04320679.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|48474373|sp|Q814F3|RNPA_BACCR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29899072|gb|AAP12343.1| Ribonuclease P protein component [Bacillus cereus ATCC 14579]
gi|228589763|gb|EEK47641.1| Ribonuclease P protein component [Bacillus cereus ATCC 10876]
gi|228629832|gb|EEK86485.1| Ribonuclease P protein component [Bacillus cereus m1550]
gi|228652750|gb|EEL08635.1| Ribonuclease P protein component [Bacillus cereus BDRD-Cer4]
gi|228670579|gb|EEL25892.1| Ribonuclease P protein component [Bacillus cereus Rock1-15]
gi|228722219|gb|EEL73620.1| Ribonuclease P protein component [Bacillus cereus AH676]
gi|228797945|gb|EEM44955.1| Ribonuclease P protein component [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 119
Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|169830201|ref|YP_001700359.1| ribonuclease P [Lysinibacillus sphaericus C3-41]
gi|168994689|gb|ACA42229.1| Ribonuclease P protein component [Lysinibacillus sphaericus C3-41]
Length = 117
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KG+ F + L RVG +V+KK G AV+RN+
Sbjct: 4 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFLEK-EGQTEFRVGLSVSKKLGNAVKRNQ 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R ++ ++ L + LK DYV+IA++ A + F E+ ++ K
Sbjct: 63 IKRYIRHSI-LDLKDDLKPNMDYVIIARQPAATMDFHEVKQSLQHVLKIAKVLRK 116
>gi|325663381|ref|ZP_08151831.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470835|gb|EGC74065.1| ribonuclease P protein component [Lachnospiraceae bacterium
4_1_37FAA]
Length = 111
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNQDFQIVYKTGKSYANKYLVMYV--RENQSGGNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A ++E+ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQSGYDIVVIARVSANGRSYREMESALIHL 103
>gi|260565067|ref|ZP_05835552.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|265990313|ref|ZP_06102870.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
gi|260152710|gb|EEW87803.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
16M]
gi|263000982|gb|EEZ13672.1| ribonuclease P protein component [Brucella melitensis bv. 1 str.
Rev.1]
Length = 145
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F + V PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 129 GGKRRTER 136
>gi|163119738|ref|YP_081442.3| ribonuclease P [Bacillus licheniformis ATCC 14580]
gi|52005862|gb|AAU25804.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus licheniformis ATCC 14580]
Length = 119
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V KG+ + L VL+ + RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKKGKSMANRQYVLYVLHQPEAKEF-RVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ ++ +LK +DY++IA++ A + ++E R++
Sbjct: 60 VKRLIRQVIQE-ERNLLKQENDYIIIARKPAAELSYEETKKSLQHLFRKSFVYRKKPNQP 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|317131006|ref|YP_004097288.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
gi|315475954|gb|ADU32557.1| ribonuclease P protein component [Bacillus cellulosilyticus DSM
2522]
Length = 121
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F +V +G+ F + L + LPR+G +V+KK G AVERNR
Sbjct: 1 MKKENRLKKNEDFQIVFQRGKSAANRQFVMYSLIKQD-QTLPRIGLSVSKKIGNAVERNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++EA+R +K D V+IA++ + + ++ + ++ K S
Sbjct: 60 IKRLMREALREVLP-HIKENVDIVIIARKPVINMSVFQITDSIQHVLKVGKVIKRSQIEV 118
Query: 120 SRK 122
++K
Sbjct: 119 NKK 121
>gi|289436081|ref|YP_003465953.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172325|emb|CBH28871.1| ribonuclease P protein component [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|313635502|gb|EFS01737.1| ribonuclease P protein component [Listeria seeligeri FSL N1-067]
gi|313640129|gb|EFS04746.1| ribonuclease P protein component [Listeria seeligeri FSL S4-171]
Length = 119
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L + ++ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKHEGTDHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ + +Y++IA++ A + F E+ + + + R N
Sbjct: 60 IKRYIRQTFHELEGQINPEN-EYIIIARKPAANMDFHEVKKSLIHVL-KVGRVLKQKTNN 117
Query: 120 SR 121
S+
Sbjct: 118 SK 119
>gi|148558200|ref|YP_001257933.1| ribonuclease P [Brucella ovis ATCC 25840]
gi|148369485|gb|ABQ62357.1| ribonuclease P protein component [Brucella ovis ATCC 25840]
Length = 145
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFLQLTEELSRRITAKGERRS 128
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 129 GGKRRTER 136
>gi|217965937|ref|YP_002351615.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|254808069|sp|B8DCV5|RNPA_LISMH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|217335207|gb|ACK41001.1| ribonuclease P protein component [Listeria monocytogenes HCC23]
gi|307572446|emb|CAR85625.1| ribonuclease P protein component [Listeria monocytogenes L99]
gi|313611879|gb|EFR86334.1| ribonuclease P protein component [Listeria monocytogenes FSL
F2-208]
Length = 119
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSTHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|15616627|ref|NP_244933.1| ribonuclease P [Bacillus halodurans C-125]
gi|9789796|sp|Q9RCA4|RNPA_BACHD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|5672645|dbj|BAA82683.1| 56%-identity [Bacillus halodurans]
gi|10176690|dbj|BAB07784.1| ribonuclease P [Bacillus halodurans C-125]
Length = 119
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ +F+ V G F + VL RVG +V+KK G AV RNR
Sbjct: 1 MKKEHRIKRSDEFSRVFNEGFSVANRQFVIYVLPK-EGQDFFRVGLSVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ + + + DYV+IA++ A + ++++ ++ K
Sbjct: 60 VKRLIRTFFQEHEQAISGE-RDYVIIARKPAADMTYEQVKGSLWHVCKKAK 109
>gi|261217608|ref|ZP_05931889.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261220832|ref|ZP_05935113.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|261318320|ref|ZP_05957517.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261320485|ref|ZP_05959682.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261757210|ref|ZP_06000919.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|265986118|ref|ZP_06098675.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
gi|265995812|ref|ZP_06108369.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|260919416|gb|EEX86069.1| ribonuclease P protein component [Brucella ceti B1/94]
gi|260922697|gb|EEX89265.1| ribonuclease P protein component [Brucella ceti M13/05/1]
gi|261293175|gb|EEX96671.1| ribonuclease P protein component [Brucella ceti M644/93/1]
gi|261297543|gb|EEY01040.1| ribonuclease P protein component [Brucella pinnipedialis B2/94]
gi|261737194|gb|EEY25190.1| ribonuclease P protein component [Brucella sp. F5/99]
gi|262550109|gb|EEZ06270.1| ribonuclease P protein component [Brucella ceti M490/95/1]
gi|264658315|gb|EEZ28576.1| ribonuclease P protein component [Brucella pinnipedialis M292/94/1]
Length = 145
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 128
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 129 GGKRRTER 136
>gi|47568686|ref|ZP_00239383.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|222098964|ref|YP_002533022.1| ribonuclease p [Bacillus cereus Q1]
gi|254808045|sp|B9IT45|RNPA_BACCQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|47554674|gb|EAL13028.1| ribonuclease P protein component [Bacillus cereus G9241]
gi|221243023|gb|ACM15733.1| ribonuclease P protein component [Bacillus cereus Q1]
Length = 115
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSTANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 114
>gi|290892035|ref|ZP_06555032.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
gi|290558629|gb|EFD92146.1| ribonuclease P protein component [Listeria monocytogenes FSL
J2-071]
Length = 119
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L S R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEESTHF-RIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|253581089|ref|ZP_04858349.1| ribonuclease P [Ruminococcus sp. 5_1_39B_FAA]
gi|251847625|gb|EES75595.1| ribonuclease P [Ruminococcus sp. 5_1_39BFAA]
Length = 123
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V + G + + + VL N R+G +V+KK G +V R+R
Sbjct: 1 MQRSESLKKNQDFQKVYRNGTSKGNRYLVMYVLKNQYMKN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ R ++E+ RL D V++A+ A ++E+ + + +
Sbjct: 59 LTRLIRESYRLNEAEFEN-SLDIVVVARPQAKDRTYQEIESALMHLAGK 106
>gi|229015404|ref|ZP_04172410.1| Ribonuclease P protein component [Bacillus cereus AH1273]
gi|229026928|ref|ZP_04183251.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228734386|gb|EEL85057.1| Ribonuclease P protein component [Bacillus cereus AH1272]
gi|228745883|gb|EEL95879.1| Ribonuclease P protein component [Bacillus cereus AH1273]
Length = 119
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYQL-NKEKQPYFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQAIMELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 118
>gi|319744393|gb|EFV96752.1| ribonuclease P protein component [Streptococcus agalactiae ATCC
13813]
Length = 129
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 21 LKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEK--EQKHFRVGISVSKKLGNAVVRNA 78
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 79 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 124
>gi|161621070|ref|YP_001594956.1| ribonuclease P [Brucella canis ATCC 23365]
gi|163845136|ref|YP_001622791.1| ribonuclease P [Brucella suis ATCC 23445]
gi|225686777|ref|YP_002734749.1| ribonuclease P [Brucella melitensis ATCC 23457]
gi|254690663|ref|ZP_05153917.1| ribonuclease P [Brucella abortus bv. 6 str. 870]
gi|254699141|ref|ZP_05160969.1| ribonuclease P [Brucella abortus bv. 2 str. 86/8/59]
gi|254700217|ref|ZP_05162045.1| ribonuclease P [Brucella suis bv. 5 str. 513]
gi|254703338|ref|ZP_05165166.1| ribonuclease P [Brucella suis bv. 3 str. 686]
gi|254720150|ref|ZP_05181961.1| ribonuclease P [Brucella sp. 83/13]
gi|254732585|ref|ZP_05191163.1| ribonuclease P [Brucella abortus bv. 4 str. 292]
gi|256058818|ref|ZP_05449034.1| ribonuclease P [Brucella neotomae 5K33]
gi|256111045|ref|ZP_05452107.1| ribonuclease P [Brucella melitensis bv. 3 str. Ether]
gi|256255845|ref|ZP_05461381.1| ribonuclease P [Brucella abortus bv. 9 str. C68]
gi|260567732|ref|ZP_05838201.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306839544|ref|ZP_07472351.1| ribonuclease P protein component [Brucella sp. NF 2653]
gi|189043728|sp|A9MCU8|RNPA_BRUC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043729|sp|A9WW33|RNPA_BRUSI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808055|sp|C0RMG2|RNPA_BRUMB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161337881|gb|ABX64185.1| ribonuclease P protein component [Brucella canis ATCC 23365]
gi|163675859|gb|ABY39969.1| ribonuclease P protein component [Brucella suis ATCC 23445]
gi|225642882|gb|ACO02795.1| ribonuclease P protein component [Brucella melitensis ATCC 23457]
gi|260154397|gb|EEW89478.1| ribonuclease P protein component [Brucella suis bv. 4 str. 40]
gi|306405376|gb|EFM61648.1| ribonuclease P protein component [Brucella sp. NF 2653]
Length = 141
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 GGKRRTER 132
>gi|42784683|ref|NP_981930.1| ribonuclease P [Bacillus cereus ATCC 10987]
gi|67461466|sp|Q72WU0|RNPA_BACC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|42740615|gb|AAS44538.1| ribonuclease P protein component [Bacillus cereus ATCC 10987]
Length = 115
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 114
>gi|315286679|ref|ZP_07872172.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
gi|313630900|gb|EFR98591.1| ribonuclease P protein component [Listeria ivanovii FSL F6-596]
Length = 119
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGKDHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++ E + +Y++IA++ A + F E+ + + + R N
Sbjct: 60 IKRYIRQTFHELEEQINPEN-EYIIIARKPAANMDFHEVKKSLIHVL-KVGRVLKQNTNN 117
Query: 120 SR 121
S+
Sbjct: 118 SK 119
>gi|152977686|ref|YP_001377203.1| ribonuclease P [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189043727|sp|A7GVQ0|RNPA_BACCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|152026438|gb|ABS24208.1| ribonuclease P protein component [Bacillus cytotoxicus NVH 391-98]
Length = 115
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG F + L+ + R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIKKNDEFQAVFQKGRSSANRQFVIYQLDK-ETQPYFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++++ + + G D+V+IA++ + ++E + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEFKKSLIHAFKRS 108
>gi|322381371|ref|ZP_08055374.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321154947|gb|EFX47218.1| ribonuclease P-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 116
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR F V + G+ F L L R+G +++KK G AV RNR
Sbjct: 1 MEKKYRLAKREDFHKVYRYGKSVANHQFVLYYLPK-TGQGEFRLGLSISKKVGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR +KE VRL + + G+DY++I ++ + +KEL R+
Sbjct: 60 LRRVIKEIVRLNIDRI-TGGYDYIIIVRKPCAEMNYKELEKSLFHVFRKA 108
>gi|254438989|ref|ZP_05052483.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
gi|198254435|gb|EDY78749.1| ribonuclease P protein component [Octadecabacter antarcticus 307]
Length = 139
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I ++K R F K + ++++ + + + RVGFT +KK G AV RNR +RR
Sbjct: 32 IVVMKTRANFVAASKARYQTAASLTVQMRDRRDGDNAVRVGFTCSKKVGNAVARNRAKRR 91
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCNHFVERVRRN 109
L+E RL + K GHDYVLI K+D F+ L F + + +
Sbjct: 92 LREIARLDLPTLAKAGHDYVLIGKKDVTENRDFEALRADFAKALGKL 138
>gi|30265505|ref|NP_847882.1| ribonuclease P [Bacillus anthracis str. Ames]
gi|47531074|ref|YP_022423.1| ribonuclease P [Bacillus anthracis str. 'Ames Ancestor']
gi|49188324|ref|YP_031577.1| ribonuclease P [Bacillus anthracis str. Sterne]
gi|49481129|ref|YP_039477.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52145295|ref|YP_086752.1| ribonuclease P [Bacillus cereus E33L]
gi|165873026|ref|ZP_02217647.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167635105|ref|ZP_02393422.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|167641750|ref|ZP_02399993.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|170689468|ref|ZP_02880658.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|170707583|ref|ZP_02898036.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|177655269|ref|ZP_02936823.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190569286|ref|ZP_03022180.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|196036129|ref|ZP_03103529.1| ribonuclease P protein component [Bacillus cereus W]
gi|196041981|ref|ZP_03109268.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|196045476|ref|ZP_03112707.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|218906679|ref|YP_002454513.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227818256|ref|YP_002818265.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229603026|ref|YP_002869696.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|254687072|ref|ZP_05150930.1| ribonuclease P [Bacillus anthracis str. CNEVA-9066]
gi|254724145|ref|ZP_05185930.1| ribonuclease P [Bacillus anthracis str. A1055]
gi|254735162|ref|ZP_05192872.1| ribonuclease P [Bacillus anthracis str. Western North America
USA6153]
gi|254742129|ref|ZP_05199816.1| ribonuclease P [Bacillus anthracis str. Kruger B]
gi|254755961|ref|ZP_05207993.1| ribonuclease P [Bacillus anthracis str. Vollum]
gi|254761359|ref|ZP_05213381.1| ribonuclease P [Bacillus anthracis str. Australia 94]
gi|301056961|ref|YP_003795172.1| ribonuclease P [Bacillus anthracis CI]
gi|47606464|sp|Q81JH0|RNPA_BACAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390323|sp|Q630B5|RNPA_BACCZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390442|sp|Q6HAE9|RNPA_BACHK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736852|sp|B7JIL4|RNPA_BACC0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808042|sp|C3P3F8|RNPA_BACAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808043|sp|C3LGU4|RNPA_BACAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30260183|gb|AAP29368.1| ribonuclease P protein component [Bacillus anthracis str. Ames]
gi|47506222|gb|AAT34898.1| ribonuclease P protein component [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182251|gb|AAT57627.1| ribonuclease P protein component [Bacillus anthracis str. Sterne]
gi|49332685|gb|AAT63331.1| ribonuclease P [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51978764|gb|AAU20314.1| ribonuclease P [Bacillus cereus E33L]
gi|164711238|gb|EDR16794.1| ribonuclease P protein component [Bacillus anthracis str. A0488]
gi|167510304|gb|EDR85707.1| ribonuclease P protein component [Bacillus anthracis str. A0193]
gi|167529579|gb|EDR92329.1| ribonuclease P protein component [Bacillus anthracis str. A0442]
gi|170127579|gb|EDS96453.1| ribonuclease P protein component [Bacillus anthracis str. A0389]
gi|170666570|gb|EDT17343.1| ribonuclease P protein component [Bacillus anthracis str. A0465]
gi|172080196|gb|EDT65288.1| ribonuclease P protein component [Bacillus anthracis str. A0174]
gi|190559593|gb|EDV13584.1| ribonuclease P protein component [Bacillus anthracis
Tsiankovskii-I]
gi|195991296|gb|EDX55264.1| ribonuclease P protein component [Bacillus cereus W]
gi|196023683|gb|EDX62359.1| ribonuclease P protein component [Bacillus cereus 03BB108]
gi|196027236|gb|EDX65856.1| ribonuclease P protein component [Bacillus cereus NVH0597-99]
gi|218535691|gb|ACK88089.1| ribonuclease P protein component [Bacillus cereus AH820]
gi|227007422|gb|ACP17165.1| ribonuclease P protein component [Bacillus anthracis str. CDC 684]
gi|229267434|gb|ACQ49071.1| ribonuclease P protein component [Bacillus anthracis str. A0248]
gi|300379130|gb|ADK08034.1| ribonuclease P [Bacillus cereus biovar anthracis str. CI]
Length = 119
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIKSSVR 118
>gi|315273160|ref|ZP_07869207.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
gi|313616211|gb|EFR89289.1| ribonuclease P protein component [Listeria marthii FSL S4-120]
Length = 119
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L + R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELEHQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKANN 117
>gi|291548770|emb|CBL25032.1| ribonuclease P protein component [Ruminococcus torques L2-14]
Length = 111
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V + G+ + ++ N + R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQSVYRNGKSFANKCLVMYIIPNELNKN--RLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL +E + G+D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-SEEHFRCGYDIVVIARTSAKDKNYHDVESALIHL 103
>gi|188587523|ref|YP_001919068.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229470481|sp|B2A474|RNPA_NATTJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|179352210|gb|ACB86480.1| ribonuclease P protein component [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 115
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS I LKK QF V + G+ + L VL N S + RVGF+V KK G +V RNR
Sbjct: 1 MSQIVTLKKNYQFRRVFRYGQSYATKYIVLFVLEN--SLNINRVGFSVGKKVGNSVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+E RL ++ G+D +L+A+ A + + + F+ +++K
Sbjct: 59 VKRLLREVYRLNNPNMM-QGYDLILLARFRADELDYHKCQREFIRLTKKSK 108
>gi|323487689|ref|ZP_08092947.1| ribonuclease P [Planococcus donghaensis MPA1U2]
gi|323398423|gb|EGA91211.1| ribonuclease P [Planococcus donghaensis MPA1U2]
Length = 113
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ +KK ++F + K G+ F + VL N RVG +V+KK G AV RNR
Sbjct: 1 MNKDQRIKKNKEFQHIFKKGKSFANRQFIVYVLKN--EQPEFRVGLSVSKKVGNAVARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ + +L DY++IA+ A + F E ++
Sbjct: 59 IKRYIRQTFLELKDDLL-PNADYIIIARPQAATLDFHESKKSLEHVLK 105
>gi|329848430|ref|ZP_08263458.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
gi|328843493|gb|EGF93062.1| ribonuclease P protein component [Asticcacaulis biprosthecum C19]
Length = 116
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L+ R F K ++ ++ + RVGFT TKK G AV RNR++RR
Sbjct: 1 MIRLQHRADFLRAAKAAYAARTGVVVQARLRDDDSADVRVGFTATKKIGNAVVRNRVKRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+EA R + + GHDYV IA+ P++ L + + R + +
Sbjct: 61 LREAARSLLPDLGRPGHDYVFIARAGTFERPWQALLDDVKAALIRLGANKPARTE 115
>gi|16802045|ref|NP_472313.1| ribonuclease P [Listeria innocua Clip11262]
gi|21263948|sp|Q926Q4|RNPA_LISIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|16415527|emb|CAC98212.1| ribonuclease P protein component [Listeria innocua Clip11262]
gi|313621679|gb|EFR92462.1| ribonuclease P protein component [Listeria innocua FSL S4-378]
gi|313625810|gb|EFR95424.1| ribonuclease P protein component [Listeria innocua FSL J1-023]
Length = 119
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V +G+ F + L R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEEASHFRIGLSVSKKIGNAVCRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 60 IKRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 117
>gi|229164438|ref|ZP_04292366.1| Ribonuclease P protein component [Bacillus cereus R309803]
gi|228619043|gb|EEK75941.1| Ribonuclease P protein component [Bacillus cereus R309803]
Length = 119
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQTVFQKGKSNANRQFVVYQL-NKEEQPYFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQAIIELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|254705521|ref|ZP_05167349.1| ribonuclease P [Brucella pinnipedialis M163/99/10]
Length = 141
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMXKGERRS 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 GGKRRTER 132
>gi|238926052|ref|YP_002939570.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|238877729|gb|ACR77436.1| ribonuclease P [Eubacterium rectale ATCC 33656]
gi|291526548|emb|CBK92135.1| ribonuclease P protein component [Eubacterium rectale DSM 17629]
gi|291529191|emb|CBK94777.1| ribonuclease P protein component [Eubacterium rectale M104/1]
Length = 115
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V G + + VL NN N R+G +V+KK G +V R+
Sbjct: 1 MKFSDSLKKNKDFQNVYNNGVSFANRYLVMYVLKNNTENN--RIGISVSKKVGNSVIRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER--VRRNKRSYY 114
+ R ++E+ RL + G D V+IA+ A + +KE+ + + + R +
Sbjct: 59 ITRLVRESYRLHE-DMFDSGLDIVVIARVAARHVGYKEIESAVLHLGGLHRIIKKQN 114
>gi|295108625|emb|CBL22578.1| ribonuclease P protein component [Ruminococcus obeum A2-162]
Length = 120
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + + VL N + R+G +V+KK G +V R+R
Sbjct: 1 MKYSESLKKNRDFQQVYKRGTSKANRYLVMYVLPNQHMKN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ R ++E+ RL + K D V+IA+ A + E+ F++ R+
Sbjct: 59 ITRLVRESYRLNES-LFKKNLDIVVIARNSANGTNYHEIEKAFMDLARK 106
>gi|331702708|ref|YP_004399667.1| ribonuclease P protein component [Lactobacillus buchneri NRRL
B-30929]
gi|329130051|gb|AEB74604.1| Ribonuclease P protein component [Lactobacillus buchneri NRRL
B-30929]
Length = 121
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + L+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQEVFETHNSVANRQFVVYSLDKPNQLHF-RVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + + D+++IA+ A + ++ + ++ K
Sbjct: 60 VKRRIRQSLLELKPYL-RQDVDFIVIARPAADQMSMSDVKASLIHVLKLAK 109
>gi|218660817|ref|ZP_03516747.1| ribonuclease P [Rhizobium etli IE4771]
Length = 107
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/94 (56%), Positives = 66/94 (70%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F +EVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGALFLMEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
LKEAVRL A ++ GHDYV++A+RD L F+E
Sbjct: 74 LKEAVRLHAGFAMRPGHDYVVVARRDVLDASFQE 107
>gi|153811983|ref|ZP_01964651.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
gi|149831882|gb|EDM86968.1| hypothetical protein RUMOBE_02376 [Ruminococcus obeum ATCC 29174]
Length = 119
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + + VL N +++ R+G +V+KK G +V R+R
Sbjct: 1 MKYSESLKKNRDFQQVYKRGTSKANRYLVMYVL--PNQHMMNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ R ++E+ RL E + D V+IA+ A ++E+ + F+ ++
Sbjct: 59 LTRLIRESYRLNEEKFDR-NLDIVVIARNSAKDRSYQEIESAFMNLAQK 106
>gi|229099914|ref|ZP_04230837.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
gi|229118977|ref|ZP_04248322.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228664502|gb|EEL19998.1| Ribonuclease P protein component [Bacillus cereus Rock1-3]
gi|228683529|gb|EEL37484.1| Ribonuclease P protein component [Bacillus cereus Rock3-29]
Length = 119
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQEVFQKGKSNANRQFVVYQL-NKEEQPNFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKKIK 118
>gi|94495883|ref|ZP_01302462.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
gi|94424575|gb|EAT09597.1| ribonuclease P protein component [Sphingomonas sp. SKA58]
Length = 190
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 44/101 (43%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+R F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 62 RRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRVLA 121
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + G D+VLI + + F L + + +
Sbjct: 122 RELLPALGIAGADHVLIGREGGIERDFSLLRAELEKALGKI 162
>gi|17988620|ref|NP_541253.1| ribonuclease P [Brucella melitensis bv. 1 str. 16M]
gi|256043890|ref|ZP_05446810.1| ribonuclease P [Brucella melitensis bv. 1 str. Rev.1]
gi|21542218|sp|Q8YDA2|RNPA_BRUME RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|17984423|gb|AAL53517.1| ribonuclease p protein component [Brucella melitensis bv. 1 str.
16M]
Length = 141
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F + V PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMAVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRS 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 GGKRRTER 132
>gi|254710752|ref|ZP_05172563.1| ribonuclease P [Brucella pinnipedialis B2/94]
gi|254712778|ref|ZP_05174589.1| ribonuclease P [Brucella ceti M644/93/1]
gi|254715847|ref|ZP_05177658.1| ribonuclease P [Brucella ceti M13/05/1]
gi|256029135|ref|ZP_05442749.1| ribonuclease P [Brucella pinnipedialis M292/94/1]
gi|256157327|ref|ZP_05455245.1| ribonuclease P [Brucella ceti M490/95/1]
gi|256253695|ref|ZP_05459231.1| ribonuclease P [Brucella ceti B1/94]
gi|260167773|ref|ZP_05754584.1| ribonuclease P [Brucella sp. F5/99]
Length = 141
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRIMAKGERRS 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 GGKRRTER 132
>gi|149202701|ref|ZP_01879673.1| ribonuclease P protein component [Roseovarius sp. TM1035]
gi|149143983|gb|EDM32017.1| ribonuclease P protein component [Roseovarius sp. TM1035]
Length = 109
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + ++ + + + RVGFT +KK G AV RNR +RRL+
Sbjct: 2 LRKRADFLAAARARRQGTGSMLVQGRDRRDGDTAIRVGFTCSKKVGNAVARNRAKRRLRA 61
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFI-PFKELCNHFVERVRRN 109
R G DYVLI K + P++ L +R+
Sbjct: 62 LARELLPAQGLPGWDYVLIGKAEETGARPYEALKRDLAYALRKL 105
>gi|23500745|ref|NP_700185.1| ribonuclease P [Brucella suis 1330]
gi|23464399|gb|AAN34190.1| ribonuclease P, protein component [Brucella suis 1330]
Length = 145
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L RR
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELS---RRITAKGE 125
Query: 115 SGKNFSRKS 123
R++
Sbjct: 126 RRSGRKRRT 134
>gi|218900628|ref|YP_002449039.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|226736853|sp|B7IST7|RNPA_BACC2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218542981|gb|ACK95375.1| ribonuclease P protein component [Bacillus cereus G9842]
gi|326943285|gb|AEA19181.1| ribonuclease P [Bacillus thuringiensis serovar chinensis CT-43]
Length = 115
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 114
>gi|167759575|ref|ZP_02431702.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC 35704]
gi|167662802|gb|EDS06932.1| hypothetical protein CLOSCI_01932 [Clostridium scindens ATCC 35704]
Length = 113
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F LV K G+ + + + NN R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKNKDFQLVYKCGKSYANKYLVMYIKENNTGKN--RLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A +K++ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGIDIVVIARIGAKGRTYKDIESALLHL 103
>gi|229106082|ref|ZP_04236694.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
gi|228677337|gb|EEL31602.1| Ribonuclease P protein component [Bacillus cereus Rock3-28]
Length = 119
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L N R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQEVFQKGKSNANRQFVVYQL-NKEEQPNFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 64 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 118
>gi|146309635|ref|YP_001190100.1| ribonuclease P [Pseudomonas mendocina ymp]
gi|254808082|sp|A4Y1A2|RNPA_PSEMY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145577836|gb|ABP87368.1| ribonuclease P protein component [Pseudomonas mendocina ymp]
Length = 134
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF V K P S+ +L +N PR+G + KK AVERNR++R++
Sbjct: 11 RLLTPRQFKAVFDSPSGKAPGKSVLLLARDNQLDHPRLGLVIGKKSVKLAVERNRIKRQI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ RL + ++ G D V++A++ + EL F + +R RS S
Sbjct: 71 RESFRLNQDNLV--GWDIVVVARKGLGDLENGELAQQFGKLWKRLARSRPSRDA 122
>gi|258517433|ref|YP_003193655.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
gi|257781138|gb|ACV65032.1| ribonuclease P protein component [Desulfotomaculum acetoxidans DSM
771]
Length = 109
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N L+K ++ V G FF + + NS R GF+V KK G AV RNR
Sbjct: 1 MANFITLRKNSEYKKVYVTGRSVANRFFVIFAI--TNSLNNSRFGFSVGKKIGKAVLRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+RR LKE RL + G+D+V++A++D + + F ++ NH + V + +
Sbjct: 59 IRRLLKEICRLN-NDIFPVGYDFVILARKDVVTLNFDQMKNHLAKLVLKLSK 109
>gi|166363145|ref|YP_001655418.1| ribonuclease P [Microcystis aeruginosa NIES-843]
gi|189043738|sp|B0JN62|RNPA_MICAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166085518|dbj|BAG00226.1| protein subunit of ribonuclease P [Microcystis aeruginosa NIES-843]
Length = 120
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN--NNSNLLPRVGFTVTKKQGC-AVE 56
+ I LK R+ F V G+ G +L L + ++ R G +++KK AV
Sbjct: 3 LPQIHRLKHRQDFQAVYGTGKRYHGSHLTLISLEDSCPDAPGPSRFGISISKKVSKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++R+++ +R + G ++I + A+ ++ + + +
Sbjct: 63 RNRLKRQIRAVIRELLPEIA-AGWRGIIIIRPGAIECNYEHFLRELKQLLVKA 114
>gi|206970039|ref|ZP_03230992.1| ribonuclease P protein component [Bacillus cereus AH1134]
gi|206734616|gb|EDZ51785.1| ribonuclease P protein component [Bacillus cereus AH1134]
Length = 115
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIKR 115
>gi|85709450|ref|ZP_01040515.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
gi|85688160|gb|EAQ28164.1| ribonuclease P protein component [Erythrobacter sp. NAP1]
Length = 125
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L KR F KG P F L L N R G TVTKK G AV RNRM+RR +E
Sbjct: 5 LTKRTDFLAANKGLRNARPGFVL--LTRPNDGEGVRYGITVTKKIGNAVVRNRMKRRFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R HD+VLI + + + + + R K
Sbjct: 63 LLRAALPEGGLANHDHVLIGRSGGVERDYSTMAEELHAALARAK 106
>gi|293364548|ref|ZP_06611271.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|306826339|ref|ZP_07459672.1| ribonuclease P protein component [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|307702546|ref|ZP_07639499.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|315611931|ref|ZP_07886849.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|322376168|ref|ZP_08050676.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|331265591|ref|YP_004325221.1| ribonuclease P [Streptococcus oralis Uo5]
gi|291316960|gb|EFE57390.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|304431452|gb|EFM34435.1| ribonuclease P protein component [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|307623892|gb|EFO02876.1| ribonuclease P protein component [Streptococcus oralis ATCC 35037]
gi|315315920|gb|EFU63954.1| ribonuclease P protein component [Streptococcus sanguinis ATCC
49296]
gi|321278850|gb|EFX55895.1| ribonuclease P protein component [Streptococcus sp. C300]
gi|326682263|emb|CBY99880.1| ribonuclease P [Streptococcus oralis Uo5]
Length = 123
Score = 87.1 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKSFRVKREKDFKAIFKDGTSFANRKFVVYQLEN--QQNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHILQSVKGSLV-EHVDFVVIARKGVETLEYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|85703243|ref|ZP_01034347.1| ribonuclease P protein component [Roseovarius sp. 217]
gi|85672171|gb|EAQ27028.1| ribonuclease P protein component [Roseovarius sp. 217]
Length = 111
Score = 87.1 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KR F + + + ++ + + + RVGFT +KK G AV RNR +RRL+
Sbjct: 4 LRKRSDFLAAARAQRQGTGSMMVQGRDRRDGDGAIRVGFTCSKKVGNAVARNRAKRRLRA 63
Query: 67 AVRLCAEGVLKHGHDYVLIAKR-DALFIPFKELCNHFVERVRRN 109
R K G DYVLI + + PF+ L +R+
Sbjct: 64 VARELLAAEGKSGWDYVLIGRADETATRPFEALKRDLCYALRKL 107
>gi|328468320|gb|EGF39326.1| ribonuclease P [Listeria monocytogenes 1816]
Length = 120
Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+KK F V +G+ F + L + R+G +V+KK G AV RNR++
Sbjct: 4 KKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNRIK 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 63 RYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 118
>gi|218232085|ref|YP_002370262.1| ribonuclease P [Bacillus cereus B4264]
gi|296505915|ref|YP_003667615.1| ribonuclease P [Bacillus thuringiensis BMB171]
gi|226736854|sp|B7H7A5|RNPA_BACC4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218160042|gb|ACK60034.1| ribonuclease P protein component [Bacillus cereus B4264]
gi|296326967|gb|ADH09895.1| ribonuclease P [Bacillus thuringiensis BMB171]
Length = 115
Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++A+ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMVRQAITELKDEIA-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 114
>gi|332800546|ref|YP_004462045.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
gi|332698281|gb|AEE92738.1| Ribonuclease P protein component [Tepidanaerobacter sp. Re1]
Length = 123
Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L K +F V K G PFF++ N R+G +V+KK G +V RN+
Sbjct: 1 MRKSLRLTKNLEFINVYKSGRRFTNPFFTMYAKKN--ELGYSRLGVSVSKKVGNSVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++RR+KE R+ +K G D V K A + + + + ++R
Sbjct: 59 IKRRIKEIFRINY-DFIKDGWDIVFSVKPPAAKLDYGSIEREIITLLKR 106
>gi|300118811|ref|ZP_07056531.1| ribonuclease P [Bacillus cereus SJ1]
gi|298723779|gb|EFI64501.1| ribonuclease P [Bacillus cereus SJ1]
Length = 115
Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQKVFQKGKSNANRQFVVYQLDKEEQPNF-RIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 114
>gi|126701307|ref|YP_001090204.1| ribonuclease P [Clostridium difficile 630]
gi|254977341|ref|ZP_05273813.1| ribonuclease P [Clostridium difficile QCD-66c26]
gi|255094671|ref|ZP_05324149.1| ribonuclease P [Clostridium difficile CIP 107932]
gi|255102898|ref|ZP_05331875.1| ribonuclease P [Clostridium difficile QCD-63q42]
gi|255308718|ref|ZP_05352889.1| ribonuclease P [Clostridium difficile ATCC 43255]
gi|255316425|ref|ZP_05358008.1| ribonuclease P [Clostridium difficile QCD-76w55]
gi|255519085|ref|ZP_05386761.1| ribonuclease P [Clostridium difficile QCD-97b34]
gi|255652268|ref|ZP_05399170.1| ribonuclease P [Clostridium difficile QCD-37x79]
gi|260685222|ref|YP_003216507.1| ribonuclease P [Clostridium difficile CD196]
gi|260688881|ref|YP_003220015.1| ribonuclease P [Clostridium difficile R20291]
gi|306521983|ref|ZP_07408330.1| ribonuclease P [Clostridium difficile QCD-32g58]
gi|123066515|sp|Q181T2|RNPA_CLOD6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115252744|emb|CAJ70589.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Clostridium difficile]
gi|260211385|emb|CBA67044.1| ribonuclease P protein component [Clostridium difficile CD196]
gi|260214898|emb|CBE07707.1| ribonuclease P protein component [Clostridium difficile R20291]
Length = 114
Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
EA RL + +K G+D V IA+ + FK++ V+R
Sbjct: 67 EAYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKR 109
>gi|153854257|ref|ZP_01995556.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
gi|149753032|gb|EDM62963.1| hypothetical protein DORLON_01550 [Dorea longicatena DSM 13814]
Length = 113
Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F + KG+ + + VL N S R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKNKDFQYIYRKGKSYANKYLVMYVLENGTSQN--RLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +K++ +
Sbjct: 59 LTRLIRESYRL-QEERFRCGLDIIVIARIGAKGKDYKDIVGAMLHL 103
>gi|325265445|ref|ZP_08132168.1| ribonuclease P protein component [Clostridium sp. D5]
gi|324029303|gb|EGB90595.1| ribonuclease P protein component [Clostridium sp. D5]
Length = 113
Score = 86.7 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G + + V+ N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNKDFQIVYKNGRSYANKYLVMYVMENGLDKN--RLGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D V+IA+ A + ++ + +
Sbjct: 59 LTRLIRESYRL-LEEHFQSGLDIVVIARVSAKEKKYHDIGSALIHL 103
>gi|254502535|ref|ZP_05114686.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
gi|222438606|gb|EEE45285.1| ribonuclease P protein component [Labrenzia alexandrii DFL-11]
Length = 137
Score = 86.7 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR F V KG F ++ L + + PR+G+TVTKK G + R+R++RR
Sbjct: 1 MNTLKKRSDFLAVAKGGRVGRRAFVVQGLQRS-AEAAPRIGYTVTKKTGNSAVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRK 122
L+ AV A + D+VL+A+ AL +PF L + + + G+ RK
Sbjct: 60 LRAAVAELASAEIPQNADFVLVARESALTLPFPNLVADLKSGLNQVLDPATPRGRGKPRK 119
>gi|254473832|ref|ZP_05087227.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
gi|211957218|gb|EEA92423.1| ribonuclease P protein component [Pseudovibrio sp. JE062]
Length = 152
Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
N+ LKKR +F V KG F L+ S+ PR+G+TVTKK G +VER+R++
Sbjct: 17 KNMKTLKKRSEFLTVAKGGRTARRAFVLQAAKTR-SDGAPRMGYTVTKKTGNSVERSRIK 75
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+ AV + + G DYVL+ +R AL PF++L V+ + S S+
Sbjct: 76 RRLRAAVASLDLDIAQTGADYVLVGRRAALSQPFEDLLKDLKGSVKNAFKPRKSRPIRSK 135
>gi|266620973|ref|ZP_06113908.1| ribonuclease P protein component [Clostridium hathewayi DSM 13479]
gi|288867394|gb|EFC99692.1| ribonuclease P protein component [Clostridium hathewayi DSM 13479]
Length = 115
Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK R F V + G+ + V R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKNRDFQEVYQTGKSYANKLLVMYVKK--TDRPETRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL + + G D V++A+ A + + + ++
Sbjct: 59 ITRLLRESFRLHE-DMTETGLDIVVVARAAAKEENYHSIESAYLHL 103
>gi|254937490|ref|ZP_05269187.1| ribonuclease P protein component [Listeria monocytogenes F6900]
gi|258610092|gb|EEW22700.1| ribonuclease P protein component [Listeria monocytogenes F6900]
Length = 120
Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK F V +G+ F + L + R+G +V+KK G AV RNR+
Sbjct: 3 KKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNRI 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 62 KRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 118
>gi|255657637|ref|ZP_05403046.1| ribonuclease P [Clostridium difficile QCD-23m63]
gi|296452682|ref|ZP_06894373.1| ribonuclease P [Clostridium difficile NAP08]
gi|296880065|ref|ZP_06904034.1| ribonuclease P [Clostridium difficile NAP07]
gi|296258464|gb|EFH05368.1| ribonuclease P [Clostridium difficile NAP08]
gi|296428932|gb|EFH14810.1| ribonuclease P [Clostridium difficile NAP07]
Length = 114
Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K G+ + + +L N + RVG +V+KK G A+ RNR+RR +K
Sbjct: 9 LKKDSDFRKVYKHGKSFANKYLVIYILKNKSD--YSRVGISVSKKVGKAITRNRVRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E RL + +K G+D V IA+ + FK++ V+R
Sbjct: 67 EVYRLNIDEKIKPGYDIVFIARVSSKDATFKDIDKSIKNLVKR 109
>gi|153815421|ref|ZP_01968089.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC 27756]
gi|317500883|ref|ZP_07959095.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089215|ref|ZP_08338117.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847280|gb|EDK24198.1| hypothetical protein RUMTOR_01656 [Ruminococcus torques ATCC 27756]
gi|316897763|gb|EFV19822.1| ribonuclease P protein component [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405767|gb|EGG85296.1| ribonuclease P protein component [Lachnospiraceae bacterium
3_1_46FAA]
Length = 111
Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V K G + + +L N R+G +V+KK G +V R+
Sbjct: 1 MKFSQSLKKNRDFQNVYKKGTSFANSYLVMYILENGLQEN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ R ++E+ RL +E + G D V+IA+ A + E+ + + + + +
Sbjct: 59 LTRLIRESYRL-SEEHFRCGIDIVVIARTSAKGRNYHEIESALIH-LGKLHK 108
>gi|225867468|ref|YP_002752846.1| ribonuclease P protein component [Bacillus cereus 03BB102]
gi|254808044|sp|C1ER80|RNPA_BACC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|225786123|gb|ACO26340.1| ribonuclease P protein component [Bacillus cereus 03BB102]
Length = 115
Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKHRIKKNDEFQTVFQKGKSNANRQFVVYQLDKAE-QPYFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++E+ + +R+
Sbjct: 60 IKRMIRQSITELKDEID-SGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIK 114
>gi|283797191|ref|ZP_06346344.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|291075150|gb|EFE12514.1| ribonuclease P protein component [Clostridium sp. M62/1]
gi|295090274|emb|CBK76381.1| ribonuclease P protein component [Clostridium cf. saccharolyticum
K10]
Length = 119
Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK F V + G+ + V+ R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKYADFQKVYRTGKSYANRLLIMYVMK-TEEGADTRIGISVSKKVGNSVVRHH 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL ++K G D V++A+ A F+++ + ++
Sbjct: 60 ITRLLRESYRLNKP-MVKAGLDIVVVARAAAKESNFRQIESAYLHL 104
>gi|114765432|ref|ZP_01444547.1| ribonuclease P protein component [Pelagibaca bermudensis HTCC2601]
gi|114542275|gb|EAU45305.1| ribonuclease P protein component [Roseovarius sp. HTCC2601]
Length = 120
Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L+KR +F + + ++ ++ + RVGFT +KK G AV RNR +R
Sbjct: 8 RIETLRKRPEFLAAARARRQPANAMLVQARERDDGSDTVRVGFTCSKKVGNAVARNRAKR 67
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNKRSYY 114
R++E RL G DYVLI +RDA PF+ L +R+
Sbjct: 68 RMREVARLTLPTKGVPGWDYVLIGRRDATAERPFELLIKDLEYALRKIHGPSK 120
>gi|325686635|gb|EGD28661.1| ribonuclease P protein component [Streptococcus sanguinis SK72]
Length = 119
Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKNAK 107
>gi|259047908|ref|ZP_05738309.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
gi|259035442|gb|EEW36697.1| ribonuclease P protein component [Granulicatella adiacens ATCC
49175]
Length = 114
Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V KG+ F + L N + RVG +V+KK G AV RNR
Sbjct: 1 MKKSYRVKKDREFQQVFHKGKSTANRQFVIYKL-NKEAQAHFRVGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++ + + + D+++IA+ + + ++E+ + + ++
Sbjct: 60 LKRRIRHILME-LDDQITQNADFIVIARSPIVQMSYQEMKSSMMHVLK 106
>gi|261312925|ref|ZP_05952122.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
gi|261301951|gb|EEY05448.1| LOW QUALITY PROTEIN: ribonuclease P protein component [Brucella
pinnipedialis M163/99/10]
Length = 121
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 9 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L R+
Sbjct: 69 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRI 120
>gi|323703943|ref|ZP_08115573.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
gi|323531101|gb|EGB21010.1| ribonuclease P protein component [Desulfotomaculum nigrificans DSM
574]
Length = 109
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LKK F + + G+ + L + + N + + R GF+++KK G AV RNR
Sbjct: 1 MSKFVPLKKNLDFKNIYQYGKSAANRYLVLYM--HPNGSSIRRFGFSISKKVGNAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR LKE RL + GHDYV I ++ + + +L H + R
Sbjct: 59 LRRLLKEICRLNLDR-FPDGHDYVFIVRQPSFDQGYHQLEKHVWHVLGRL 107
>gi|23100950|ref|NP_694417.1| ribonuclease P [Oceanobacillus iheyensis HTE831]
gi|29427757|sp|Q8EKU0|RNPA_OCEIH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|22779185|dbj|BAC15451.1| ribonuclease P protein component [Oceanobacillus iheyensis HTE831]
Length = 121
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ +F K G + + R+G +V KK G AV RNR
Sbjct: 1 MKKQYRIKQNEEFQYTFKKGHSFANRQLVIYYREKEDQCHF-RIGLSVGKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+++ + K +D V+IA+ + E+ + +
Sbjct: 60 IKRCLRQSFHELEPDI-KPAYDIVIIARNPTRNMNCGEIKKSLSHLLYK 107
>gi|29427802|sp|Q8FV30|RNPA_BRUSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 141
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/129 (39%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F V+ GE R+GP F +EV PRVGFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLTVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRLKEA+R A + DYV++A+ AL PF +L RR
Sbjct: 65 VIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELS---RRITAKGE 121
Query: 115 SGKNFSRKS 123
R++
Sbjct: 122 RRSGRKRRT 130
>gi|126651993|ref|ZP_01724185.1| ribonuclease P [Bacillus sp. B14905]
gi|126591262|gb|EAZ85371.1| ribonuclease P [Bacillus sp. B14905]
Length = 117
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V KG+ F + L + RVG +V+KK G AV+RN+
Sbjct: 4 MKKRQRVKKNDDFQKVFKKGKSFANRQFVVYFL-SKEEQTEFRVGLSVSKKLGNAVKRNQ 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R ++ ++ L + LK DYV+IA++ A + F E+ ++ K
Sbjct: 63 IKRYIRHSI-LDLKDDLKTNMDYVIIARQPAATMDFHEVKQSLQHVLKIAKVLKK 116
>gi|227508125|ref|ZP_03938174.1| ribonuclease P [Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227511150|ref|ZP_03941199.1| ribonuclease P [Lactobacillus buchneri ATCC 11577]
gi|227523337|ref|ZP_03953386.1| ribonuclease P [Lactobacillus hilgardii ATCC 8290]
gi|227085632|gb|EEI20944.1| ribonuclease P [Lactobacillus buchneri ATCC 11577]
gi|227089528|gb|EEI24840.1| ribonuclease P [Lactobacillus hilgardii ATCC 8290]
gi|227192354|gb|EEI72421.1| ribonuclease P [Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 126
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + L+ + RVG +V KK G AV RN
Sbjct: 6 MRKSYRVKKEAEFQKVFETHNSVANRQFVVYTLDKPDQLHF-RVGISVGKKIGNAVHRNW 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++A+ + + D+++IA+ + +++ + + + +
Sbjct: 65 VKRRIRQAIFELKPDL-RQDVDFIVIARPSTDQMSMRDVKSSLIHVFKLAR 114
>gi|163740290|ref|ZP_02147684.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
gi|161386148|gb|EDQ10523.1| ribonuclease P protein component [Phaeobacter gallaeciensis 2.10]
Length = 122
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNN---NNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
KRR F + + ++ ++ R+GFT +KK G AV RNR +RRL+
Sbjct: 15 KRRDFLAAARARRQGTKGMMVQGRKRHAYDSVGDGIRMGFTCSKKVGNAVSRNRAKRRLR 74
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRS 112
E R+ + G DYVLI + PF +L N + +++
Sbjct: 75 EVARMILPIHGRTGWDYVLIGRAGETADRPFDDLKNDLIYALKKIHGK 122
>gi|289167101|ref|YP_003445368.1| ribonuclease P [Streptococcus mitis B6]
gi|288906666|emb|CBJ21500.1| ribonuclease P [Streptococcus mitis B6]
Length = 123
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ + +G L+ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHII-QNVKGSLEENVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|167644609|ref|YP_001682272.1| ribonuclease P protein component [Caulobacter sp. K31]
gi|167347039|gb|ABZ69774.1| ribonuclease P protein component [Caulobacter sp. K31]
Length = 148
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I LKKR F K +++ ++ + L RVGFT TKK G +V+RNR +R
Sbjct: 15 KIERLKKRPDFLKAAKAPALARGAVFMQMRPRHDDDPLIRVGFTATKKIGGSVQRNRAKR 74
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RL+EA RL + DYV IA+ + L + +
Sbjct: 75 RLREAARLLLPLHGRPSCDYVFIARGGTGQRAWGRLLDDVKIAL 118
>gi|291165951|gb|EFE27998.1| ribonuclease P protein component [Filifactor alocis ATCC 35896]
Length = 112
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKK F V +G+ + N S RVGF+++KK G AV RN+ RRRL
Sbjct: 9 SLKKNEDFRTVYNRGKSFANRQLVFYYMPNKLSEN--RVGFSISKKFGKAVYRNKARRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KE +R A K G+D + I + A + L ++
Sbjct: 67 KEILR--ASSCKKQGYDMIFIVRPGAKEADYATLEKSVTHLFQK 108
>gi|118589755|ref|ZP_01547160.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
gi|118437841|gb|EAV44477.1| ribonuclease P protein component [Stappia aggregata IAM 12614]
Length = 133
Score = 86.4 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR +F V KG F ++ L +S+ RVG+TVTKK G +V R+R++RRL+
Sbjct: 3 TLKKRSEFLAVAKGGRLGRRAFVVQGLKR-DSDDASRVGYTVTKKTGNSVVRSRIKRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRK 122
AV + D+VL+A+ AL +PF+++ + + G+ R+
Sbjct: 62 AAVAELVPEDIPQRADFVLVARDSALTLPFEKIVADLKSGLSQVLDPQTPRGRGKPRR 119
>gi|164686448|ref|ZP_02210476.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
gi|164604459|gb|EDQ97924.1| hypothetical protein CLOBAR_00013 [Clostridium bartlettii DSM
16795]
Length = 114
Score = 86.0 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L+K F V K G+ + + ++ NN RVG +V+KK G A+ RN+++RR
Sbjct: 7 ERLRKDSDFRRVYKHGKSFANRYLVMYIMRNNLEYN--RVGISVSKKVGKAIVRNKVKRR 64
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++E+ RL + +K G+D V IA+ + + E+ V + K
Sbjct: 65 IRESFRLDVDKKIKSGYDIVFIARVAISDMQYNEINKSMKHLVNKFK 111
>gi|220933192|ref|YP_002510100.1| ribonuclease P protein component [Halothermothrix orenii H 168]
gi|219994502|gb|ACL71105.1| ribonuclease P protein component [Halothermothrix orenii H 168]
Length = 121
Score = 86.0 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 9 KRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
K F V KG+ + L NN R+GF+++K+ G AV RN++RRRLKE
Sbjct: 15 KNSDFKRVYSKGKSLASRYLVLYYYPNNLDKN--RIGFSISKRVGKAVVRNKLRRRLKEI 72
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R +K G+D V I ++ ++ + + +L + ++R +
Sbjct: 73 IR--LTDNIKSGYDLVFIGRKPSVSLDYHDLKKDVHQLLKRAR 113
>gi|330961503|gb|EGH61763.1| ribonuclease P [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 133
Score = 86.0 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPTPEEKP 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|28872713|ref|NP_795332.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968443|ref|ZP_03396586.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|301384269|ref|ZP_07232687.1| ribonuclease P [Pseudomonas syringae pv. tomato Max13]
gi|302063881|ref|ZP_07255422.1| ribonuclease P [Pseudomonas syringae pv. tomato K40]
gi|302131964|ref|ZP_07257954.1| ribonuclease P [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|38258464|sp|Q87TR9|RNPA_PSESM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28855969|gb|AAO59027.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926731|gb|EEB60283.1| ribonuclease P protein component [Pseudomonas syringae pv. tomato
T1]
gi|331017729|gb|EGH97785.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 133
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + + S
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPTPEEKS 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|306830234|ref|ZP_07463417.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
gi|304427601|gb|EFM30698.1| ribonuclease P protein component [Streptococcus mitis ATCC 6249]
Length = 123
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QQNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-DHVDFVVIARKGVETLEYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|87198600|ref|YP_495857.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
gi|87134281|gb|ABD25023.1| ribonuclease P protein component [Novosphingobium aromaticivorans
DSM 12444]
Length = 162
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-------SNLLPRVGFTVTKKQGC 53
M+ I ++KR F +G P F L V ++ R G TVTKK G
Sbjct: 1 MTRIATIRKRADFVAANRGIRVARPGFVLLVNRVAKPGDDASVADAEMRFGVTVTKKIGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV RNRM+RR + +R G D+V+I + + F L + R
Sbjct: 61 AVVRNRMKRRFRALLREALPTGGIPGADHVMIGREGGVERDFALLREELAVALSRAAAGK 120
Query: 114 YSGKNF 119
Sbjct: 121 GDPPRK 126
>gi|307707728|ref|ZP_07644207.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|322378155|ref|ZP_08052640.1| ribonuclease P protein component [Streptococcus sp. M334]
gi|307616226|gb|EFN95420.1| ribonuclease P protein component [Streptococcus mitis NCTC 12261]
gi|321280885|gb|EFX57900.1| ribonuclease P protein component [Streptococcus sp. M334]
Length = 123
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLEYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|22298144|ref|NP_681391.1| putativ eribonuclease P [Thermosynechococcus elongatus BP-1]
gi|22294323|dbj|BAC08153.1| tll0601 [Thermosynechococcus elongatus BP-1]
Length = 245
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
+ L+ R F V + + ++ L +S PR+ V+KK AV+RNR
Sbjct: 2 LPRQHRLRDRHDFDRVYQHKTAHHGKLAVLWLAPQSSREAPRLAIVVSKKVSKRAVDRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R+ + +R + G D +++ ++ AL + ++ + + +
Sbjct: 62 LKRQWRRVIRPLLPQMA-AGWDMIVVVRQAALHVSDEDCRTELTQLMAKA 110
>gi|295697835|ref|YP_003591073.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
gi|295413437|gb|ADG07929.1| ribonuclease P protein component [Bacillus tusciae DSM 2912]
Length = 134
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R +F V +G + N + R GF+V+KK G AV RN+
Sbjct: 1 MRAENRLRSREEFRRVFQRGVSVANREIVVYAWNRGDG-GPWRAGFSVSKKVGGAVVRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RRL+EAV L G D V+IA+ F++L + V +
Sbjct: 60 VKRRLREAVWG-QGERLPTGWDLVVIARPGCDGASFEQLYRGVSDLVEKA 108
>gi|24378834|ref|NP_720789.1| ribonuclease P [Streptococcus mutans UA159]
gi|290581140|ref|YP_003485532.1| putative ribonuclease P protein component [Streptococcus mutans
NN2025]
gi|29427729|sp|Q8DVX4|RNPA_STRMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24376710|gb|AAN58095.1|AE014881_9 putative ribonuclease P protein component [Streptococcus mutans
UA159]
gi|254998039|dbj|BAH88640.1| putative ribonuclease P protein component [Streptococcus mutans
NN2025]
Length = 119
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + +G F + L + S+ RVG +V K+ G AV RN
Sbjct: 1 MKKAYRVKSDKDFQAIFTEGRSVANRKFVVYSLEKDQSHY--RVGLSVGKRLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+L+ + + D+V+IA++ + + + + V ++ K
Sbjct: 59 IKRKLRHVLMELGPYLGTQ--DFVVIARKGVEELDYSTMKKNLVHVLKLAK 107
>gi|331086953|ref|ZP_08336029.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409614|gb|EGG89053.1| ribonuclease P protein component [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 111
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V K G+ + + V N + R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNQDFQIVYKTGKSYANKYLVMYV--RENQSRGNRLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G+D V+IA+ A ++E+ + +
Sbjct: 59 LTRLIRESYRL-QEEHFQSGYDIVVIARVSANGRSYREMESALIHL 103
>gi|212640680|ref|YP_002317200.1| ribonuclease P [Anoxybacillus flavithermus WK1]
gi|226736851|sp|B7GMW3|RNPA_ANOFW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|212562160|gb|ACJ35215.1| RNase P protein component [Anoxybacillus flavithermus WK1]
Length = 112
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K G F L VL+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKYRIKKNEEFQEVFKRGTSVANRQFVLYVLDKPEQL-YFRIGLSVSKKIGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +++ ++ G DYV+IA+ + ++E + +RR
Sbjct: 60 VKRYIRQVFHE-ERDRIEIGKDYVIIARMPVATMEYEEAKKSLLHVLRRA 108
>gi|255283811|ref|ZP_05348366.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
gi|255265694|gb|EET58899.1| ribonuclease P protein component [Bryantella formatexigens DSM
14469]
Length = 118
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V + G+ + + L N + R+G +V+KK G +V R+R
Sbjct: 1 MIFSESLKKNRDFQNVYRQGKSYANKYLIMYALQNAGTRN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
M R ++E+ RL + G D+V+I + A ++E+ + + + + R K
Sbjct: 59 MTRLVRESYRLNESA-FQGGFDFVVIVRPAAKEKGYREIESALMH-LGKLHRVLIEEK 114
>gi|126728222|ref|ZP_01744038.1| ribonuclease P protein component [Sagittula stellata E-37]
gi|126711187|gb|EBA10237.1| ribonuclease P protein component [Sagittula stellata E-37]
Length = 130
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNN-NNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ ++K+R F + F L+ PRVGFT +KK G AV RNR +R
Sbjct: 18 LTVIKQRPDFLKAARARRVPCEGFLLQARKRQPGEAEGPRVGFTCSKKVGNAVARNRAKR 77
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSYY 114
RL+E RL G ++ HDYVLI + + PF L + + +
Sbjct: 78 RLREIARLVMPGRVRPDHDYVLIGRAEKTANRPFDLLQDDLGKALAVLHGGRE 130
>gi|210614345|ref|ZP_03290164.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
gi|210150689|gb|EEA81698.1| hypothetical protein CLONEX_02378 [Clostridium nexile DSM 1787]
Length = 116
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F +V KG+ + + + N + R+G +V+KK G +V R+R
Sbjct: 1 MHFSESLKKNKDFQIVYRKGQSYANKYLVMYIYQNQSERN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E ++G D V+IA+ A +KE+ + +
Sbjct: 59 LTRLIRESYRL-QEDKFQNGLDIVIIARAGAKGRTYKEIESALIHL 103
>gi|288906263|ref|YP_003431485.1| ribonuclease P protein component [Streptococcus gallolyticus UCN34]
gi|306832309|ref|ZP_07465463.1| ribonuclease P protein component [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306834433|ref|ZP_07467547.1| ribonuclease P protein component [Streptococcus bovis ATCC 700338]
gi|325979274|ref|YP_004288990.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288732989|emb|CBI14570.1| ribonuclease P protein component [Streptococcus gallolyticus UCN34]
gi|304423419|gb|EFM26571.1| ribonuclease P protein component [Streptococcus bovis ATCC 700338]
gi|304425748|gb|EFM28866.1| ribonuclease P protein component [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325179202|emb|CBZ49246.1| ribonuclease P [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 119
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + KG F + L N RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQAIFSKGTSVANRKFVVYQLEKN--QGHYRVGLSVSKKLGNAVTRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ V + + HD+V+IA++ + + E+ + + ++
Sbjct: 59 IKRKIRHVVMELSPNLR--HHDFVIIARKGVEELDYHEVKKNLLHVLK 104
>gi|225028840|ref|ZP_03718032.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
gi|224953836|gb|EEG35045.1| hypothetical protein EUBHAL_03127 [Eubacterium hallii DSM 3353]
Length = 116
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS L+K +F V + G+ + F + + N+ S+ RVG +V+KK G ++ R+R
Sbjct: 1 MSEFKSLRKNWEFQAVYRNGKSKANRCFVMIIKKNDTSSN--RVGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+ R ++E +RL + K G+D V++A+ A + + +
Sbjct: 59 VTRVIREVMRLHWGEI-KSGYDIVIVARPSAKDSDYGKFESAI 100
>gi|307705715|ref|ZP_07642561.1| ribonuclease P protein component [Streptococcus mitis SK597]
gi|307709884|ref|ZP_07646332.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307710909|ref|ZP_07647335.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307617265|gb|EFN96439.1| ribonuclease P protein component [Streptococcus mitis SK321]
gi|307619374|gb|EFN98502.1| ribonuclease P protein component [Streptococcus mitis SK564]
gi|307620729|gb|EFN99819.1| ribonuclease P protein component [Streptococcus mitis SK597]
Length = 123
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|331104701|ref|ZP_04590127.2| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024525|gb|EGI04581.1| ribonuclease P [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 133
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPAPETKP 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|322391228|ref|ZP_08064700.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
gi|321145981|gb|EFX41370.1| ribonuclease P protein component [Streptococcus peroris ATCC
700780]
Length = 123
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + K GE F + L N RVG +V+KK G AV RN+
Sbjct: 1 MRKSFRVKKEKDFDAIFKEGESVANRKFVIYRLEN--QQQHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + ++ D+V+IA++ + + E+ + + ++ K
Sbjct: 59 IKRRIRHVLIENSNQIVD-NVDFVVIARKGVETLEYAEIEQNLLHVLKLAK 108
>gi|325688909|gb|EGD30917.1| ribonuclease P protein component [Streptococcus sanguinis SK115]
gi|325695447|gb|EGD37347.1| ribonuclease P protein component [Streptococcus sanguinis SK150]
gi|332358081|gb|EGJ35913.1| ribonuclease P protein component [Streptococcus sanguinis SK49]
Length = 119
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|302390795|ref|YP_003826616.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
gi|302201423|gb|ADL08993.1| ribonuclease P protein component [Thermosediminibacter oceani DSM
16646]
Length = 116
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L K +F V K G P FS+ N R+G +V KK G +V RNR
Sbjct: 1 MKKCFRLTKNFEFMRVYKKGRRAGCPLFSMYA--KENQLGYSRLGISVRKKTGKSVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR++EA R E V K G+D V+ K DA F E+ + +++
Sbjct: 59 IKRRIREAFRTNMENV-KKGYDIVVSVKEDAREADFNEIKRSLIYLLKKL 107
>gi|322388372|ref|ZP_08061975.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
gi|321140685|gb|EFX36187.1| ribonuclease P protein component [Streptococcus infantis ATCC
700779]
Length = 144
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK + F + K G F + L NN ++ RVG +V+KK G AV RN+
Sbjct: 22 LRKSFRVKKEKDFDAIFKKGASVANRKFVIYRLENNETH--FRVGLSVSKKLGNAVTRNQ 79
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + ++ D+V+IA++ + + E+ + + +R K
Sbjct: 80 IKRRIRHVLIQNSNQLV-DNVDFVVIARKGVELLEYAEIEKNLLHVLRLAK 129
>gi|85374956|ref|YP_459018.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
gi|122543775|sp|Q2N7X0|RNPA_ERYLH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84788039|gb|ABC64221.1| ribonuclease P protein component [Erythrobacter litoralis HTCC2594]
Length = 121
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
++KR F +G P F L L + N R G TVTKK G AV RNRM+RR +E
Sbjct: 8 IRKRADFLAANRGLRVARPGFVL--LAHPNQGQGQRYGITVTKKIGNAVVRNRMKRRFRE 65
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ HD++LI + + F +L + +RR +
Sbjct: 66 LLWELLPQQGLADHDHILIGREGGIERDFGKLREELMLALRRAREGKGDP 115
>gi|295115470|emb|CBL36317.1| ribonuclease P protein component [butyrate-producing bacterium
SM4/1]
Length = 119
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK F V + G+ + V+ R+G +V+KK G +V R+
Sbjct: 1 MKHFNSIKKYADFQKVYRTGKSYANRLLIMYVMKTEEGAD-TRIGISVSKKVGNSVVRHH 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E+ RL ++K G D V++A+ A F+++ + ++
Sbjct: 60 ITRLLRESYRLNKP-MVKAGLDIVVVARAAAKESNFRQIESAYLHL 104
>gi|229014653|ref|ZP_04171767.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
gi|229065146|ref|ZP_04200439.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|229136312|ref|ZP_04265059.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|229170190|ref|ZP_04297876.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228613291|gb|EEK70430.1| Ribonuclease P protein component [Bacillus cereus AH621]
gi|228647184|gb|EEL03272.1| Ribonuclease P protein component [Bacillus cereus BDRD-ST196]
gi|228716175|gb|EEL67894.1| Ribonuclease P protein component [Bacillus cereus AH603]
gi|228746664|gb|EEL96553.1| Ribonuclease P protein component [Bacillus mycoides DSM 2048]
Length = 119
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 5 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYKLDKEK-QPHFRIGLSVSKKIGNAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 64 IKRMIRQSIIELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 118
>gi|309799089|ref|ZP_07693342.1| ribonuclease P protein component [Streptococcus infantis SK1302]
gi|308117324|gb|EFO54747.1| ribonuclease P protein component [Streptococcus infantis SK1302]
Length = 123
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F+ + K GE F + L NN + RVG +V+KK G AV RN+
Sbjct: 1 MKKRFRVKKEKDFSAIFKKGESFANRKFVIYRLENNEQH--FRVGLSVSKKLGNAVMRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + ++ D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHILIEHKNQLV-ENVDFVVIARKGVEILDYAEMEKNLLHVLKLSK 108
>gi|49475953|ref|YP_033994.1| ribonuclease P [Bartonella henselae str. Houston-1]
gi|60390412|sp|Q6G2G7|RNPA_BARHE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49238761|emb|CAF28022.1| Ribonuclease p protein component [Bartonella henselae str.
Houston-1]
Length = 133
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LEV + S+L+ RVGFTVT++ G
Sbjct: 4 MKKKHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAERESSLVARVGFTVTRRNGN 63
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV+RNR++RRL+EAVR+ ++ G DYV++A DAL PF L N R++ +
Sbjct: 64 AVKRNRIKRRLREAVRVGLTDDMEAGTDYVIVAHPDALHAPFTSLVNELSRRIKPKTKHQ 123
Query: 114 YSGKNFS 120
+ +
Sbjct: 124 KRQQGNT 130
>gi|210624038|ref|ZP_03294155.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
gi|210153245|gb|EEA84251.1| hypothetical protein CLOHIR_02107 [Clostridium hiranonis DSM 13275]
Length = 115
Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + K G+ + + +L N R+G +++KK G AV RNR+RR +K
Sbjct: 9 IKKDYEFRKIYKHGKSFANKYLVVYILKNKTDQ--TRIGISISKKVGNAVTRNRIRRLIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E+ RL + +K G+D V I++ A +K++ +R+NK
Sbjct: 67 ESYRLNIDENIKKGYDLVFISRVAAKDATYKDIEKAMNHLMRKNK 111
>gi|125974854|ref|YP_001038764.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|256003889|ref|ZP_05428876.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281418691|ref|ZP_06249710.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|125715079|gb|ABN53571.1| ribonuclease P protein component [Clostridium thermocellum ATCC
27405]
gi|255992227|gb|EEU02322.1| ribonuclease P protein component [Clostridium thermocellum DSM
2360]
gi|281407775|gb|EFB38034.1| ribonuclease P protein component [Clostridium thermocellum JW20]
gi|316941976|gb|ADU76010.1| ribonuclease P protein component [Clostridium thermocellum DSM
1313]
Length = 126
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N LKK +F + K G+ G L V+ N+ R+G TV KK G +V+RNR
Sbjct: 1 MKNTVPLKKNSEFLRLYKKGKFFAGKNIVLYVMKNDLGIN--RLGITVGKKFGKSVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
M+R ++E RL E +K G+D V +A+ FK++ +++
Sbjct: 59 MKRLIRENYRL-YEEFVKKGYDLVFVARNTEQMPDFKDVKKEMKFLMKKLDIFEQEKYEQ 117
Query: 120 SRKS 123
++S
Sbjct: 118 EKQS 121
>gi|158321894|ref|YP_001514401.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
gi|166991074|sp|A8MKS3|RNPA_ALKOO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158142093|gb|ABW20405.1| ribonuclease P protein component [Alkaliphilus oremlandii OhILAs]
Length = 114
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K F V K + +L N RVGFTV+KK G +V R+R
Sbjct: 1 MKAINRLRKNEDFRKVYKKRKSMANKLLIIYILEN--GYNFNRVGFTVSKKVGKSVIRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L E+ RL +K G+D + +A+ + +KE+ + + +++
Sbjct: 59 VKRLLNESYRLN-NEKVKQGYDIIFVARNTCVDASYKEIESAILHLLKKM 107
>gi|81429495|ref|YP_396496.1| ribonuclease P [Lactobacillus sakei subsp. sakei 23K]
gi|123563593|sp|Q38UE4|RNPA_LACSS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78611138|emb|CAI56191.1| Ribonuclease P protein component [Lactobacillus sakei subsp. sakei
23K]
Length = 120
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F V + F + L+ RVG +V KK G AV RN+
Sbjct: 1 MRKSYRVKKEQDFQTVFDASQSVANRNFVVYRLDKP-GQKHFRVGLSVGKKVGNAVMRNQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +++++ +L+ D+++IA+R A + E + + + K +
Sbjct: 60 VKRYIRQSITELKPDLLQP-VDFLVIARRGANQLTMAETKQNLIHVFKLAKLLKEEADSA 118
Query: 120 SR 121
S
Sbjct: 119 SE 120
>gi|160882063|ref|YP_001561031.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
gi|189043733|sp|A9KLY3|RNPA_CLOPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160430729|gb|ABX44292.1| ribonuclease P protein component [Clostridium phytofermentans ISDg]
Length = 116
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LK +QF V K G+ + + V N S R+G +V+KK G +V R+R+ R
Sbjct: 3 ESLKNSQQFGNVYKNGKSFANKYLVMYVCKNELSIN--RLGISVSKKVGNSVVRHRISRL 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++E+ RL + + G D V++A+ + + E+ + + + + + S +
Sbjct: 61 IRESYRLN-DSISNSGLDIVIVARAGSKGKNYSEISSALMH-LAKLHKIISSSEP 113
>gi|323350583|ref|ZP_08086245.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|322123265|gb|EFX94950.1| ribonuclease P protein component [Streptococcus sanguinis VMC66]
gi|324992540|gb|EGC24461.1| ribonuclease P protein component [Streptococcus sanguinis SK405]
gi|324995931|gb|EGC27842.1| ribonuclease P protein component [Streptococcus sanguinis SK678]
gi|327460764|gb|EGF07099.1| ribonuclease P protein component [Streptococcus sanguinis SK1]
gi|327488847|gb|EGF20646.1| ribonuclease P protein component [Streptococcus sanguinis SK1058]
gi|332360027|gb|EGJ37841.1| ribonuclease P protein component [Streptococcus sanguinis SK1056]
Length = 119
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKHLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|304318137|ref|YP_003853282.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779639|gb|ADL70198.1| ribonuclease P protein component [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 124
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +K+ F V + G+ + + L NN RVGF+V+KK G +V RNR +
Sbjct: 13 DMVKIKRSSDFKNVYRYGKSISNQYIVMYYLENNLGIN--RVGFSVSKKVGKSVIRNRYK 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E RL + K G+D + IA+ + F + N + ++
Sbjct: 71 RLLYENFRLLDRDLFK-GYDIIFIARNKIVEADFYMVGNAMRRLLTKS 117
>gi|77409736|ref|ZP_00786395.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
gi|77171650|gb|EAO74860.1| ribonuclease P protein component [Streptococcus agalactiae COH1]
Length = 109
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEK--EQKHFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 VKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 104
>gi|168334922|ref|ZP_02693042.1| ribonuclease P protein component [Epulopiscium sp. 'N.t. morphotype
B']
Length = 111
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F V KG+ L NN R+G +V+KK G +V R+R
Sbjct: 1 MKTTEKLRKNTEFKKVYAKGKSYANKELVLYKFKNN--VQCNRLGISVSKKVGNSVTRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ R ++E RL E ++ G D V+IA+ + F E+ N + ++R
Sbjct: 59 VTRLIRENFRLNEENLVLVGFDIVIIAREASSTKNFYEIKNSLYKLLKR 107
>gi|229593498|ref|YP_002875617.1| ribonuclease P [Pseudomonas fluorescens SBW25]
gi|229365364|emb|CAY53751.1| ribonuclease P protein component [Pseudomonas fluorescens SBW25]
Length = 134
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + ++ G D V++A++ + EL HF + +R R+ S
Sbjct: 66 KRLMRESFRLHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTNKPAPAVS 123
Query: 121 RKS 123
++
Sbjct: 124 TET 126
>gi|196249891|ref|ZP_03148587.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
gi|196210767|gb|EDY05530.1| ribonuclease P protein component [Geobacillus sp. G11MC16]
Length = 167
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 10 RRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+F V +G F + L+ R+G +V+KK G AV RN+++R +++
Sbjct: 56 NEEFQEVFRRGVSTANRQFVVYTLDRPE-QPYFRIGLSVSKKLGKAVVRNQIKRYVRQCF 114
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E V+ G DYV+IA++ + + E+ + +R+ G+
Sbjct: 115 LELKEEVV-PGKDYVIIARQPVAEMGYAEVKKSLLHVLRKAGGLKKRGRT 163
>gi|260437687|ref|ZP_05791503.1| ribonuclease P protein component [Butyrivibrio crossotus DSM 2876]
gi|292809913|gb|EFF69118.1| ribonuclease P protein component [Butyrivibrio crossotus DSM 2876]
Length = 112
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LK F V K G + + VL N N R+G +V+KK G ++ R+R
Sbjct: 1 MNGYESLKSNMNFQNVYKNGVSYANKYLVMYVLENRTDN--LRLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R ++E+VRL + +LK G+D V+IA+ + + + + + +R +K
Sbjct: 59 LTRLIRESVRLNSGSILK-GYDIVIIARANLKGKNYADTESALLHLLRLHK 108
>gi|255024428|ref|ZP_05296414.1| ribonuclease P [Listeria monocytogenes FSL J1-208]
Length = 121
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
I LKK F V + G+ F + L + R+G +V+KK G AV RNR+
Sbjct: 4 KKIIELKKIDDFQKVFRRGKSFANRQFVVYTLK-QEGSTHFRIGLSVSKKIGNAVCRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 63 KRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 119
>gi|260904983|ref|ZP_05913305.1| ribonuclease P protein component [Brevibacterium linens BL2]
Length = 121
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
++ F V K G + L + + + RVGF V+K G AV RNR++RR
Sbjct: 6 HRIRSGDDFRRVFKAGVRVRSAHLMAHSLIDTDDSHAARVGFIVSKAVGNAVVRNRVKRR 65
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
L+E +R+ + + G +V+ A A F EL + + + ++ S +
Sbjct: 66 LREIMRVRLDTLD-SGALFVIRALPQAADAEFAELESEVTMLMDKAQKKLESRGRRT 121
>gi|161486725|ref|YP_238201.2| ribonuclease P [Pseudomonas syringae pv. syringae B728a]
gi|257485601|ref|ZP_05639642.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289628216|ref|ZP_06461170.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289649106|ref|ZP_06480449.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 2250]
gi|289677546|ref|ZP_06498436.1| ribonuclease P [Pseudomonas syringae pv. syringae FF5]
gi|298484607|ref|ZP_07002712.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|302185838|ref|ZP_07262511.1| ribonuclease P [Pseudomonas syringae pv. syringae 642]
gi|298160864|gb|EFI01880.1| Ribonuclease P protein component [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320321686|gb|EFW77785.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. B076]
gi|320331112|gb|EFW87083.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
gi|330870073|gb|EGH04782.1| ribonuclease P [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330890252|gb|EGH22913.1| ribonuclease P [Pseudomonas syringae pv. mori str. 301020]
gi|330898609|gb|EGH30028.1| ribonuclease P [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330937302|gb|EGH41310.1| ribonuclease P [Pseudomonas syringae pv. pisi str. 1704B]
gi|330952336|gb|EGH52596.1| ribonuclease P [Pseudomonas syringae Cit 7]
gi|330970323|gb|EGH70389.1| ribonuclease P [Pseudomonas syringae pv. aceris str. M302273PT]
gi|330976400|gb|EGH76457.1| ribonuclease P [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330987017|gb|EGH85120.1| ribonuclease P [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011889|gb|EGH91945.1| ribonuclease P [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 133
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + S
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|296283116|ref|ZP_06861114.1| ribonuclease P protein component [Citromicrobium bathyomarinum
JL354]
Length = 128
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L R F +G F L V N R G TVTKK G AV RNRM+RR +E
Sbjct: 11 LTARADFLAANRGLRVPARGFVLLV--RPNEGRGMRYGITVTKKIGNAVVRNRMKRRFRE 68
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+ HD+VLI + + F +L + V + + R R+
Sbjct: 69 LLWAHLPEHGLPDHDHVLIGRDGGVERDFAKLSSELVGALEKAARGEGQRGRPPRR 124
>gi|170761125|ref|YP_001788989.1| ribonuclease P [Clostridium botulinum A3 str. Loch Maree]
gi|238688510|sp|B1KUB6|RNPA_CLOBM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169408114|gb|ACA56525.1| ribonuclease P protein component [Clostridium botulinum A3 str.
Loch Maree]
Length = 111
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K ++F V + G+ L + N + R+G +V+KK G +V RNR++
Sbjct: 2 KENKIRKNKEFRHVYRRGKSYSNRLLVLYICKNRCNIN--RLGVSVSKKVGKSVTRNRVK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 60 RLIKESYRLNLDKDMKQGYDLVFIARNSSNDKDYKDIESALINLLKKA 107
>gi|22536591|ref|NP_687442.1| ribonuclease P [Streptococcus agalactiae 2603V/R]
gi|76788039|ref|YP_329127.1| ribonuclease P [Streptococcus agalactiae A909]
gi|76799480|ref|ZP_00781621.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77407079|ref|ZP_00784082.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
gi|77412331|ref|ZP_00788644.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77414748|ref|ZP_00790875.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|29427732|sp|Q8E1E7|RNPA_STRA5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123602349|sp|Q3K2X6|RNPA_STRA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|22533427|gb|AAM99314.1|AE014210_4 ribonuclease P protein component [Streptococcus agalactiae 2603V/R]
gi|76563096|gb|ABA45680.1| ribonuclease P protein component [Streptococcus agalactiae A909]
gi|76585170|gb|EAO61787.1| ribonuclease P protein component [Streptococcus agalactiae 18RS21]
gi|77159198|gb|EAO70382.1| ribonuclease P protein component [Streptococcus agalactiae 515]
gi|77161620|gb|EAO72618.1| ribonuclease P protein component [Streptococcus agalactiae CJB111]
gi|77174310|gb|EAO77176.1| ribonuclease P protein component [Streptococcus agalactiae H36B]
Length = 109
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEK--EQKHFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELDYQALEKNLIHVLK 104
>gi|160893414|ref|ZP_02074199.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
gi|156864809|gb|EDO58240.1| hypothetical protein CLOL250_00963 [Clostridium sp. L2-50]
Length = 117
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MSN LK R+F V + + + NS R+G +V+KK G +V R++
Sbjct: 1 MSNFITLKNSREFGSVYNTKDSVANKYLVMY--LRANSLEYNRLGISVSKKVGNSVVRHK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ R ++EA RL + ++ G+D V +A+ A + E+ + + R
Sbjct: 59 VTRLIREAYRLN-KDCIRSGYDIVFVARTTAKDKGYHEIESAMMHLFR 105
>gi|330876351|gb|EGH10500.1| ribonuclease P [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 133
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + S
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|328944627|gb|EGG38788.1| ribonuclease P protein component [Streptococcus sanguinis SK1087]
Length = 119
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKSGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKKLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|225570323|ref|ZP_03779348.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
gi|225160855|gb|EEG73474.1| hypothetical protein CLOHYLEM_06420 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNKDFQTVYNKGISYANKYLVMYVMENHTERN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +KE+ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHL 103
>gi|327462708|gb|EGF09030.1| ribonuclease P protein component [Streptococcus sanguinis SK1057]
gi|332365879|gb|EGJ43636.1| ribonuclease P protein component [Streptococcus sanguinis SK355]
Length = 119
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKKGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|229829516|ref|ZP_04455585.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
gi|229791947|gb|EEP28061.1| hypothetical protein GCWU000342_01608 [Shuttleworthia satelles DSM
14600]
Length = 120
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K R L V N+ R+G +V++K G +V R+
Sbjct: 5 MIFSESLKKNADFQKVYKEHNSRANRLLVLYVRANDLGRN--RLGISVSRKVGNSVVRHH 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ R ++EA RL + G D V++A++ A F ++ + F+ + R ++
Sbjct: 63 LTRLIREAYRLHEAS-FQIGWDMVVVARKQAGDADFHQMESAFLH-IARLQKLITEADQ 119
>gi|254451170|ref|ZP_05064607.1| ribonuclease P [Octadecabacter antarcticus 238]
gi|198265576|gb|EDY89846.1| ribonuclease P [Octadecabacter antarcticus 238]
Length = 129
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
++K R F K ++++ + + + RVGFT +KK G AV RNR +R
Sbjct: 21 RFAVMKTRANFVAASKARYETATSLTVQMRDRRDGDDSMRVGFTCSKKVGNAVARNRAKR 80
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRN 109
RL+E RL + K GHDYVLI K+D F+ L + + +
Sbjct: 81 RLREIARLDLPHLAKPGHDYVLIGKKDLTATREFEALRADLAKALGKL 128
>gi|220910608|ref|YP_002485919.1| ribonuclease P [Cyanothece sp. PCC 7425]
gi|259494102|sp|B8HR50|RNPA_CYAP4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219867219|gb|ACL47558.1| ribonuclease P protein component [Cyanothece sp. PCC 7425]
Length = 131
Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNN--------------NSNLLPRVGF 45
++ L+KR+ F V + G+ +L NS PR+G
Sbjct: 2 LAKPYRLRKRQDFTAVYQQGKRWNSSHLALRTYPRRRSALALDGVKQSALNSREPPRIGI 61
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++++K AV RNR++R+L+ +R + + G D V++ + A+ +++ +
Sbjct: 62 SISQKVSKRAVVRNRIKRQLRAILRGLLPYL-QPGWDLVIVVRPTAVECDYQQFLQELKQ 120
Query: 105 RV 106
+
Sbjct: 121 LL 122
>gi|119383624|ref|YP_914680.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
gi|119373391|gb|ABL68984.1| ribonuclease P protein component [Paracoccus denitrificans PD1222]
Length = 149
Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN--LLPRVGFTVTKKQGCAVERNRM 60
+ L+KR F + P F L+ RVGFT +KK G AV RNR
Sbjct: 31 RLETLRKRADFLRAASARRQGMPGFLLQARRRPEGEAGQAIRVGFTCSKKLGNAVTRNRA 90
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+RRL+ R GV + G DYVL+ + A
Sbjct: 91 KRRLRALAREVMPGVARPGWDYVLVGRPGAT 121
>gi|312964015|ref|ZP_07778486.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
gi|311282050|gb|EFQ60660.1| ribonuclease P protein component [Pseudomonas fluorescens WH6]
Length = 134
Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + ++ G D V++A++ + EL HF + +R R++ S
Sbjct: 66 KRLMRESFRLHQDTLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARTHKPAPAVS 123
Query: 121 RKS 123
++
Sbjct: 124 TET 126
>gi|114798810|ref|YP_759143.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
gi|114738984|gb|ABI77109.1| ribonuclease P protein component [Hyphomonas neptunium ATCC 15444]
Length = 121
Score = 84.4 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 12 QFALVKKGELRKGPFFSLEVLNNNNSNLLPRVG--FTVTKKQGCAVERNRMRRRLKEAVR 69
+F V+ G + ++ VG +T TKK G AVERNR +RRL+EA R
Sbjct: 19 EFTYVRDGVTERRKTLVVQARARPGEAPGEHVGEGYTATKKVGGAVERNRAKRRLREASR 78
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G DYV IA+ L + L + + R
Sbjct: 79 RLLAQYGLPGWDYVFIAREATLDTGWARLLDDMESALISLAR 120
>gi|187777369|ref|ZP_02993842.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
gi|187774297|gb|EDU38099.1| hypothetical protein CLOSPO_00925 [Clostridium sporogenes ATCC
15579]
Length = 111
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K ++F V + G+ L + N + R+G +V+KK G +V RNR++
Sbjct: 2 KENKIRKNKEFRHVYRRGKSYSNRLLVLYICKNRCNIN--RLGVSVSKKVGKSVIRNRVK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL + +K G+D V IA+ + +K++ N + +++
Sbjct: 60 RLIKESYRLNLDENMKKGYDLVFIARNSSNDKDYKDIENALINLLKKA 107
>gi|166032894|ref|ZP_02235723.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
gi|166027251|gb|EDR46008.1| hypothetical protein DORFOR_02615 [Dorea formicigenerans ATCC
27755]
Length = 112
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V K G + + VL N R+G +V+KK G ++ R+R
Sbjct: 1 MKYSESLKKHKDFQHVYKKGSSYANKYLVMYVLENQTEGN--RLGISVSKKVGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ R ++E+ RL E + G D V+IA+ A ++++ + + R
Sbjct: 59 LTRLIRESYRL-QEDMFSSGRDIVVIARGAAKGKNYRDIESALIHLAR 105
>gi|150392477|ref|YP_001322526.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
gi|166991073|sp|A6TXE9|RNPA_ALKMQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149952339|gb|ABR50867.1| ribonuclease P protein component [Alkaliphilus metalliredigens
QYMF]
Length = 111
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LKK + F +V KG + ++NNN R+GFTV+KK G +V R+R
Sbjct: 1 MQSNNKLKKNQDFRMVYQKGRSMANKLLIIYIVNNNLEYN--RIGFTVSKKVGNSVVRSR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R +KE+ RL + K HD V IA+ + +KE+ + + +R+ K
Sbjct: 59 VKRLMKESYRLNEGKI-KTSHDIVFIARPNCKESTYKEIESALLHLIRKMK 108
>gi|225571948|ref|ZP_03780818.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
gi|225159396|gb|EEG72015.1| hypothetical protein CLOHYLEM_07922 [Clostridium hylemonae DSM
15053]
Length = 117
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V KG + + V+ N+ R+G +V+KK G +V R+R
Sbjct: 1 MKFSESLKKNKDFQTVYNKGISCANKYLVMYVMENHTERN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL E + G D ++IA+ A +KE+ + +
Sbjct: 59 LTRLIRESYRL-QEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHL 103
>gi|148985979|ref|ZP_01819032.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|169833324|ref|YP_001695393.1| ribonuclease P [Streptococcus pneumoniae Hungary19A-6]
gi|238688311|sp|B1I998|RNPA_STRPI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147921952|gb|EDK73077.1| ribonuclease P protein component [Streptococcus pneumoniae
SP3-BS71]
gi|168995826|gb|ACA36438.1| ribonuclease P protein component [Streptococcus pneumoniae
Hungary19A-6]
gi|301800798|emb|CBW33450.1| ribonuclease P protein component [Streptococcus pneumoniae OXC141]
Length = 123
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|149007809|ref|ZP_01831405.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
gi|147760659|gb|EDK67632.1| ribonuclease P protein component [Streptococcus pneumoniae
SP18-BS74]
Length = 123
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRIKREKDFKAIFKEGTSFANRKFVIYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVEALGYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|330881910|gb|EGH16059.1| ribonuclease P [Pseudomonas syringae pv. glycinea str. race 4]
Length = 133
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL HF + +R RS + +
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKT 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|154483921|ref|ZP_02026369.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
gi|149735412|gb|EDM51298.1| hypothetical protein EUBVEN_01627 [Eubacterium ventriosum ATCC
27560]
Length = 116
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
N LKK F V KG+ + + + V NN S R+G +V+KK G +V R+ +
Sbjct: 5 KNYDSLKKNSDFQNVYVKGKSKANRYLVMYVAQNNLSIN--RLGISVSKKVGNSVVRHHL 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R ++EA RL + D V+IA+ A +KE+ + + +
Sbjct: 63 TRLIREAYRLN-SNMFNSSLDIVVIARNTAKDKTYKEVESALLHLAK 108
>gi|327438164|dbj|BAK14529.1| RNase P protein component [Solibacillus silvestris StLB046]
Length = 113
Score = 84.0 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ +KK F V KG+ F + L R+G +V+KK G AV R +
Sbjct: 1 MNKRQRIKKNEDFQKVFKKGKSFANRQFVVYCLKKEEQQAF-RIGLSVSKKVGNAVTRVQ 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A L + +K DYV+IA+ A + F E ++
Sbjct: 60 VKRYIRQAF-LELKDEVKQDMDYVIIARTQAATLDFHETKKSLQHVLK 106
>gi|20809129|ref|NP_624300.1| ribonuclease P [Thermoanaerobacter tengcongensis MB4]
gi|22001932|sp|Q8R6K4|RNPA_THETN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|20517809|gb|AAM25904.1| RNase P protein component [Thermoanaerobacter tengcongensis MB4]
Length = 116
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F V F + N + R G++V+KK G +V RNR++R
Sbjct: 4 KLTKLKKTQEFKRVYSNGKTVANRFIVMYYM-PNGLQVNRAGYSVSKKIGKSVVRNRVKR 62
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L E+ RL + + G+D V +A+ F L + +++
Sbjct: 63 LLHESFRLLNSNL-RQGYDVVFVARGKIAEADFHTLKESIEKLLKK 107
>gi|71735437|ref|YP_277295.1| ribonuclease P [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123634466|sp|Q48BF0|RNPA_PSE14 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71555990|gb|AAZ35201.1| ribonuclease P protein component [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 133
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D V++A++ + EL +F + +R RS + S
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQYFGKLWKRLARSRPIPEEKS 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|170743185|ref|YP_001771840.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
gi|168197459|gb|ACA19406.1| ribonuclease P protein component [Methylobacterium sp. 4-46]
Length = 138
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--LPRVGFTVTKKQGCAVERNRMR 61
I + +R + G + + R GFTVTKK G A ERNR+R
Sbjct: 8 IGRITRRPDYLAAATGRRFHTGRMTAQGRPRRAEEPATGLRFGFTVTKKTGHATERNRIR 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK-NFS 120
RRLK A + D VLI +R+AL PF+ L N + + +G+
Sbjct: 68 RRLKAAAAEIGPEHAERALDLVLIGRREALGAPFEVLVNDIRRALATVTKPKPAGQPGRP 127
Query: 121 RK 122
R+
Sbjct: 128 RR 129
>gi|63259067|gb|AAY40163.1| ribonuclease P protein [Pseudomonas syringae pv. syringae B728a]
Length = 123
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ R F V K P +L +L NN PR+G + KK +VERNR++R ++
Sbjct: 1 MLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
E+ R + ++ G D V++A++ + EL HF + +R RS + S +
Sbjct: 61 ESFRQHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKSEPA 116
>gi|51894474|ref|YP_077165.1| ribonuclease P protein component [Symbiobacterium thermophilum IAM
14863]
gi|60390356|sp|Q67J29|RNPA_SYMTH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51858163|dbj|BAD42321.1| ribonuclease P protein component [Symbiobacterium thermophilum IAM
14863]
Length = 115
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LK R F V +G + VL + RVGF +K G AV RNR
Sbjct: 1 MKKAYRLKSRLAFQSVYAQGRSVANRAAVVHVLK-QQAGTPTRVGFAAGRKLGKAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RRL+EAVRL V + G+ V+IA++ AL +PF EL E R
Sbjct: 60 AKRRLREAVRLLWPRV-RQGYYIVVIARQAALDMPFPELRQKVEELFERA 108
>gi|327472486|gb|EGF17917.1| ribonuclease P protein component [Streptococcus sanguinis SK408]
Length = 119
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|330812751|ref|YP_004357213.1| ribonuclease, P protein component [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380859|gb|AEA72209.1| putative ribonuclease, P protein component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 156
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L +N PR+G + KK +V+RNR+
Sbjct: 29 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARSNDLDHPRLGLVIGKKSVKLSVQRNRL 88
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R ++E+ RL + ++ G D V++A++ + EL HF + +R R+
Sbjct: 89 KRLMRESFRLNQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNK 139
>gi|163943167|ref|YP_001648051.1| ribonuclease P [Bacillus weihenstephanensis KBAB4]
gi|226741385|sp|A9VTM3|RNPA_BACWK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163865364|gb|ABY46423.1| ribonuclease P protein component [Bacillus weihenstephanensis
KBAB4]
Length = 115
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIKKNDEFQAVFQKGQSNANRQFVVYKLDKEK-QPHFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +++++ + + G D+V+IA++ + ++EL + +R+
Sbjct: 60 IKRMIRQSIIELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVFKRSGMKRIK 114
>gi|55821783|ref|YP_140225.1| ribonuclease P [Streptococcus thermophilus LMG 18311]
gi|55823701|ref|YP_142142.1| ribonuclease P [Streptococcus thermophilus CNRZ1066]
gi|67461280|sp|Q5LY00|RNPA_STRT1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461286|sp|Q5M2K4|RNPA_STRT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|55737768|gb|AAV61410.1| ribonuclease P protein component [Streptococcus thermophilus LMG
18311]
gi|55739686|gb|AAV63327.1| ribonuclease P protein component [Streptococcus thermophilus
CNRZ1066]
Length = 111
Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + L+ N RVG +V+K G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYCLDRN--LPHFRVGLSVSKHLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQLEHQ--DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|225575688|ref|ZP_03784298.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
gi|225037092|gb|EEG47338.1| hypothetical protein RUMHYD_03781 [Blautia hydrogenotrophica DSM
10507]
Length = 113
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F +V + G + + VL N R+G +V+KK G +V R+R
Sbjct: 1 MEFSESLKKNRDFQIVYRCGTSLANRYLVMYVLENELKKN--RLGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E RL + G+D V+IA+ A +K++ +
Sbjct: 59 LTRLIRECYRLNESR-FQVGYDIVVIARVSAKDQNYKKIEQALLHL 103
>gi|28379982|ref|NP_786874.1| ribonuclease P [Lactobacillus plantarum WCFS1]
gi|254558116|ref|YP_003064533.1| ribonuclease P [Lactobacillus plantarum JDM1]
gi|300769105|ref|ZP_07078994.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308182186|ref|YP_003926314.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258509|sp|Q88RX0|RNPA_LACPL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28272823|emb|CAD65752.1| ribonuclease P [Lactobacillus plantarum WCFS1]
gi|254047043|gb|ACT63836.1| ribonuclease P [Lactobacillus plantarum JDM1]
gi|300493345|gb|EFK28524.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308047677|gb|ADO00221.1| ribonuclease P [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 114
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + VL RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKETEFQQVFETRNSYANRQFVIYVLEKP-GQPHFRVGISVGKKIGNAVARNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + K D+++IA+ E + ++
Sbjct: 60 VKRRIRQSITELKPQL-KQDADFLVIARPTVAGKSQAETKAYLSHALKLAH 109
>gi|220930848|ref|YP_002507757.1| ribonuclease P [Clostridium cellulolyticum H10]
gi|220001176|gb|ACL77777.1| ribonuclease P protein component [Clostridium cellulolyticum H10]
Length = 121
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G ++ +L N S R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRNITVYILPNKQSLN--RIGISVSKKAGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R E + +G+D V+ A+ + + F +++ +
Sbjct: 59 KKRLIRESYR-YFEEYISNGYDIVIAARAGESVPTYGVVLKEFKYLLKKLQ 108
>gi|19745379|ref|NP_606515.1| ribonuclease P [Streptococcus pyogenes MGAS8232]
gi|21909711|ref|NP_663979.1| ribonuclease P [Streptococcus pyogenes MGAS315]
gi|28895092|ref|NP_801442.1| ribonuclease P [Streptococcus pyogenes SSI-1]
gi|50913584|ref|YP_059556.1| ribonuclease P [Streptococcus pyogenes MGAS10394]
gi|71902867|ref|YP_279670.1| ribonuclease P [Streptococcus pyogenes MGAS6180]
gi|71910021|ref|YP_281571.1| ribonuclease P [Streptococcus pyogenes MGAS5005]
gi|94989716|ref|YP_597816.1| ribonuclease P [Streptococcus pyogenes MGAS10270]
gi|94993598|ref|YP_601696.1| ribonuclease P [Streptococcus pyogenes MGAS10750]
gi|209558772|ref|YP_002285244.1| ribonuclease P [Streptococcus pyogenes NZ131]
gi|54039266|sp|P66691|RNPA_STRP8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042180|sp|P66690|RNPA_STRP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390309|sp|Q5XDZ0|RNPA_STRP6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123640563|sp|Q48VE1|RNPA_STRPM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228254|sp|Q1JIQ1|RNPA_STRPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228255|sp|Q1J8K9|RNPA_STRPF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741397|sp|B5XJN7|RNPA_STRPZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|19747486|gb|AAL97014.1| putative ribonuclease P protein component [Streptococcus pyogenes
MGAS8232]
gi|21903895|gb|AAM78782.1| putative ribonuclease P protein component [Streptococcus pyogenes
MGAS315]
gi|28810337|dbj|BAC63275.1| putative ribonuclease P protein component [Streptococcus pyogenes
SSI-1]
gi|50902658|gb|AAT86373.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10394]
gi|71801962|gb|AAX71315.1| ribonuclease P protein component [Streptococcus pyogenes MGAS6180]
gi|71852803|gb|AAZ50826.1| ribonuclease P protein component [Streptococcus pyogenes MGAS5005]
gi|94543224|gb|ABF33272.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10270]
gi|94547106|gb|ABF37152.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS10750]
gi|209539973|gb|ACI60549.1| Ribonuclease P protein component [Streptococcus pyogenes NZ131]
Length = 119
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQDH--FRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|118582024|ref|YP_903274.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
gi|118504734|gb|ABL01217.1| ribonuclease P protein component [Pelobacter propionicus DSM 2379]
Length = 135
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+KR F ++ F + +N + LPR+G T +KK GCAV RNR+
Sbjct: 19 PKSVRLRKRADFVALQNAAGKVTVKGFLIVW--QDNGHDLPRLGITASKKTGCAVVRNRI 76
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E R + D +IA+R++ + F+ + + RR
Sbjct: 77 KRFVRETFRCNRRTL--PPVDMNVIARRESAAMDFRGVQRELEKAFRRM 123
>gi|25010516|ref|NP_734911.1| ribonuclease P [Streptococcus agalactiae NEM316]
gi|29427743|sp|Q8E6W5|RNPA_STRA3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23094869|emb|CAD46087.1| Unknown [Streptococcus agalactiae NEM316]
Length = 109
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ +G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEK--EQKHFRVGISVSKKLGNAVVRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L ++ +D+V+IA++ + ++ L + + ++
Sbjct: 59 IKRKIRHV--LLSQKTALQDYDFVVIARKGVEELNYQALEKNLIHVLK 104
>gi|312144703|ref|YP_003996149.1| ribonuclease P protein component [Halanaerobium sp. 'sapolanicus']
gi|311905354|gb|ADQ15795.1| ribonuclease P protein component [Halanaerobium sp. 'sapolanicus']
Length = 108
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F V G+ L VL + G +V+KK G AV RN+++R
Sbjct: 1 MESLKKNKEFKKVYNNGKSYVSRNLVLYVLETPE-KDFNKYGLSVSKKVGNAVVRNKLKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R++E +R + K +D V IA+ A+ + F+EL + ++
Sbjct: 60 RMREIIREFEKKGFKA-YDIVFIARNPAVELDFQELKRDIKKLYKKA 105
>gi|260588819|ref|ZP_05854732.1| ribonuclease P protein component [Blautia hansenii DSM 20583]
gi|260540598|gb|EEX21167.1| ribonuclease P protein component [Blautia hansenii DSM 20583]
Length = 123
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F LV K G + + + N S R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNNDFQLVYKTGTSYANRYLVMYLKENQLSRN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ R ++E+ RL E G+D V++ + + + L + + + R + S +N
Sbjct: 59 LTRLIRESYRLNEEKFC-CGYDIVVVVRVNGKNQNYHSLESALLH-LGRLHKVVRSKEN 115
>gi|307294064|ref|ZP_07573908.1| ribonuclease P protein component [Sphingobium chlorophenolicum L-1]
gi|306880215|gb|EFN11432.1| ribonuclease P protein component [Sphingobium chlorophenolicum L-1]
Length = 139
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 44/101 (43%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
KR F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 3 KRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRVLA 62
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R G D+VLI + + + F L + + +
Sbjct: 63 RELLPVHGVAGADHVLIGRSEGIERDFGLLRGELEKALHKV 103
>gi|148381584|ref|YP_001256125.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
3502]
gi|153932824|ref|YP_001385961.1| ribonuclease P [Clostridium botulinum A str. ATCC 19397]
gi|153934757|ref|YP_001389368.1| ribonuclease P [Clostridium botulinum A str. Hall]
gi|153939463|ref|YP_001393003.1| ribonuclease P [Clostridium botulinum F str. Langeland]
gi|168181114|ref|ZP_02615778.1| ribonuclease P protein component [Clostridium botulinum NCTC 2916]
gi|170754447|ref|YP_001783282.1| ribonuclease P [Clostridium botulinum B1 str. Okra]
gi|226951099|ref|YP_002806190.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|166226712|sp|A7FPL5|RNPA_CLOB1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226713|sp|A5I820|RNPA_CLOBH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226714|sp|A7GJP3|RNPA_CLOBL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890165|sp|B1IHS3|RNPA_CLOBK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808060|sp|C1FP35|RNPA_CLOBJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148291068|emb|CAL85205.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
3502]
gi|152928868|gb|ABS34368.1| ribonuclease P protein component [Clostridium botulinum A str. ATCC
19397]
gi|152930671|gb|ABS36170.1| ribonuclease P protein component [Clostridium botulinum A str.
Hall]
gi|152935359|gb|ABS40857.1| ribonuclease P protein component [Clostridium botulinum F str.
Langeland]
gi|169119659|gb|ACA43495.1| ribonuclease P protein component [Clostridium botulinum B1 str.
Okra]
gi|182668109|gb|EDT80088.1| ribonuclease P protein component [Clostridium botulinum NCTC 2916]
gi|226841638|gb|ACO84304.1| ribonuclease P protein component [Clostridium botulinum A2 str.
Kyoto]
gi|322807971|emb|CBZ05546.1| ribonuclease P protein component [Clostridium botulinum H04402 065]
Length = 111
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K ++F V + G+ L + N + R+G +V+KK G +V RNR++
Sbjct: 2 KENKIRKNKEFRHVYRRGKSYSNRLLVLYICKNRCNIN--RLGVSVSKKVGKSVIRNRVK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 60 RLIKESYRLNLDENMKKGYDLVFIARNSSNDRDYKDIESALINLLKKA 107
>gi|184156318|ref|YP_001844658.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227514116|ref|ZP_03944165.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260662536|ref|ZP_05863431.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
gi|238689194|sp|B2GEU6|RNPA_LACF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183227662|dbj|BAG28178.1| ribonuclease P [Lactobacillus fermentum IFO 3956]
gi|227087487|gb|EEI22799.1| ribonuclease P [Lactobacillus fermentum ATCC 14931]
gi|260553227|gb|EEX26170.1| ribonuclease P [Lactobacillus fermentum 28-3-CHN]
Length = 114
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + F + + N RVG +V KK G AV+R
Sbjct: 1 MKKSYRIKKESDFQRVFETHNSVANHKFVIYQMQKPN-QPHFRVGISVGKKVGNAVQRGW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++ + + K D+++IA++ A + KE+ + V +
Sbjct: 60 VKRRIRQTLLEVKPEL-KQDVDFLVIARKSAADLSMKEIKKNLVHALTLAH 109
>gi|260584255|ref|ZP_05852002.1| ribonuclease P [Granulicatella elegans ATCC 700633]
gi|260157773|gb|EEW92842.1| ribonuclease P [Granulicatella elegans ATCC 700633]
Length = 128
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V G F + ++ +N RVG +V+KK G AV RNR
Sbjct: 1 MRKSYRVKKEQEFQRVFHHGNSVANRQFVVYQIDKSN-QSHFRVGISVSKKLGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++ + + + D+++IA++ + + ++E+ + ++
Sbjct: 60 IKRLIRSVLTELKPQL-QSEIDFIVIARKPVVSMNYQEVKKCMMHVLK 106
>gi|324989806|gb|EGC21749.1| ribonuclease P protein component [Streptococcus sanguinis SK353]
Length = 119
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKHLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|306828049|ref|ZP_07461314.1| ribonuclease P protein component [Streptococcus pyogenes ATCC
10782]
gi|304429765|gb|EFM32809.1| ribonuclease P protein component [Streptococcus pyogenes ATCC
10782]
Length = 119
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQDH--FRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLGYQELQQNLHHVLK 104
>gi|139473066|ref|YP_001127781.1| ribonuclease P [Streptococcus pyogenes str. Manfredo]
gi|166228256|sp|A2RCF8|RNPA_STRPG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134271312|emb|CAM29530.1| ribonuclease P protein component [Streptococcus pyogenes str.
Manfredo]
Length = 119
Score = 83.7 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN S RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNR--SQDHFRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|224498309|ref|ZP_03666658.1| ribonuclease P [Listeria monocytogenes Finland 1988]
gi|254991920|ref|ZP_05274110.1| ribonuclease P [Listeria monocytogenes FSL J2-064]
Length = 121
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK F V + G+ F + L + R+G +V+KK G AV RNR+
Sbjct: 4 KKNIEIKKNDDFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++++ + +Y++IA++ A + F E+ + ++ + N
Sbjct: 63 KRYIRQSFHELESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 119
>gi|322412739|gb|EFY03647.1| ribonuclease P [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 119
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG + KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKVGKSTANRKFVIYHLAKD--QKHFRVGISAGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + + EL + ++
Sbjct: 59 VKRKIRHVLMALGNQLKSE--DFVVIARKGVETLDYHELQQNLHHVLK 104
>gi|331268190|ref|YP_004394682.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
gi|329124740|gb|AEB74685.1| ribonuclease P protein component [Clostridium botulinum BKT015925]
Length = 113
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V + G+ L V NNN+ R+G +V+KK G +V R+R
Sbjct: 1 MKKHEKIRKNIEFRRVYRRGKSYSNGLLVLYVFKNNNNVDKSRIGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL V K G+D V +A+ ++ F E+ + + ++R
Sbjct: 61 VKRLISESYRLNNTNV-KIGYDLVFVARVNSKDKSFSEIESSLINLLKRA 109
>gi|134301156|ref|YP_001114652.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
gi|172044354|sp|A4J9S4|RNPA_DESRM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|134053856|gb|ABO51827.1| ribonuclease P protein component [Desulfotomaculum reducens MI-1]
Length = 113
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V + G + L N L R GF+++KK G AV RNR
Sbjct: 1 MKKFVSLKKNSDFRNVYRFGVSAANRYLVLY--KFPNKGLGRRFGFSISKKVGKAVCRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+RR LKE R + D+V I ++ + F ++ H + +
Sbjct: 59 LRRILKELCRFHLDRFS-DDCDFVFIVRQTSSDQDFHQMEKHMWHVWGKLNKQEK 112
>gi|146284524|ref|YP_001174677.1| ribonuclease P [Pseudomonas stutzeri A1501]
gi|166226733|sp|A4VS84|RNPA_PSEU5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145572729|gb|ABP81835.1| ribonuclease P protein component [Pseudomonas stutzeri A1501]
Length = 131
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L RQF V K P ++ +L N PR+G + KK +VERNR++
Sbjct: 7 REKRLLTPRQFKAVFDSPSGKVPGRNVLLLARENDLQHPRLGLVIGKKSVKLSVERNRIK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
R+++E R + G D V+IA++ + EL F + +R R+
Sbjct: 67 RQIRETFRHHQLELA--GWDIVIIARKGLADLDNPELAKQFAKLWKRLSRNPAKTAAEP 123
>gi|332365177|gb|EGJ42940.1| ribonuclease P protein component [Streptococcus sanguinis SK1059]
Length = 119
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQYQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|296330035|ref|ZP_06872519.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676759|ref|YP_003868431.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153074|gb|EFG93939.1| ribonuclease P [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305415003|gb|ADM40122.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 116
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDE-LRVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + ++E R
Sbjct: 60 IKRLIRQAFLEEKEKLKEK--DYIIIARKPASQLTYEETKKSLQHLFR 105
>gi|327468458|gb|EGF13943.1| ribonuclease P protein component [Streptococcus sanguinis SK330]
Length = 119
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNAIFKRGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEQLDYHQVEQNLLHVLKIAK 107
>gi|307128243|ref|YP_003880274.1| ribonuclease P protein component [Streptococcus pneumoniae 670-6B]
gi|306485305|gb|ADM92174.1| ribonuclease P protein component [Streptococcus pneumoniae 670-6B]
Length = 123
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVIYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVEALGYAEMEKNLLHVL-KLSKIYQEGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|257866273|ref|ZP_05645926.1| ribonuclease P [Enterococcus casseliflavus EC30]
gi|257873211|ref|ZP_05652864.1| ribonuclease P [Enterococcus casseliflavus EC10]
gi|257875891|ref|ZP_05655544.1| ribonuclease P [Enterococcus casseliflavus EC20]
gi|257800231|gb|EEV29259.1| ribonuclease P [Enterococcus casseliflavus EC30]
gi|257807375|gb|EEV36197.1| ribonuclease P [Enterococcus casseliflavus EC10]
gi|257810057|gb|EEV38877.1| ribonuclease P [Enterococcus casseliflavus EC20]
Length = 116
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + G F + VL S+ RVG +V KK G AV+RN
Sbjct: 6 MRKSYRVKTEQDFQKVFQAGNSFANRKFVVYVLPKEQSH--FRVGLSVGKKVGNAVKRNE 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ KE+ ++ ++ K
Sbjct: 64 IKRKIRASLTEMKPRI-EPAVDFIVIARPSIATCSSKEIYSNLEHVLKLAK 113
>gi|49077256|gb|AAT49655.1| PA5569 [synthetic construct]
Length = 136
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 71 RESFRHNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 122
>gi|323705847|ref|ZP_08117419.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534843|gb|EGB24622.1| ribonuclease P protein component [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 125
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +K+ R F V + G+ + + L N RVGF+++KK G +V RNR +
Sbjct: 13 DMIKIKRSRDFKNVYRHGKSISNQYIVMYFLENGLDVN--RVGFSISKKIGKSVVRNRYK 70
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L E RL + K G+D + IA+ + F L N ++++
Sbjct: 71 RLLYENFRLLDGDL-KKGYDIIFIARNKIVESDFYTLGNAMRRLLKKS 117
>gi|15903895|ref|NP_359445.1| ribonuclease P [Streptococcus pneumoniae R6]
gi|116515893|ref|YP_817258.1| ribonuclease P [Streptococcus pneumoniae D39]
gi|148992120|ref|ZP_01821894.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|148998806|ref|ZP_01826243.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|149003815|ref|ZP_01828643.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|149011895|ref|ZP_01833043.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|149023610|ref|ZP_01836113.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|168484115|ref|ZP_02709067.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|168487014|ref|ZP_02711522.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|168489935|ref|ZP_02714134.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|168492463|ref|ZP_02716606.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|168494638|ref|ZP_02718781.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|168576993|ref|ZP_02722827.1| ribonuclease P protein component [Streptococcus pneumoniae MLV-016]
gi|182684978|ref|YP_001836725.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|194397253|ref|YP_002038623.1| ribonuclease P [Streptococcus pneumoniae G54]
gi|221232759|ref|YP_002511913.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225855531|ref|YP_002737043.1| ribonuclease P [Streptococcus pneumoniae JJA]
gi|225857615|ref|YP_002739126.1| ribonuclease P [Streptococcus pneumoniae P1031]
gi|225859798|ref|YP_002741308.1| ribonuclease P [Streptococcus pneumoniae 70585]
gi|225861861|ref|YP_002743370.1| ribonuclease P [Streptococcus pneumoniae Taiwan19F-14]
gi|237650611|ref|ZP_04524863.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974]
gi|237821071|ref|ZP_04596916.1| ribonuclease P [Streptococcus pneumoniae CCRI 1974M2]
gi|298229606|ref|ZP_06963287.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254932|ref|ZP_06978518.1| ribonuclease P [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501540|ref|YP_003723480.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|303254946|ref|ZP_07341027.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|303260532|ref|ZP_07346499.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|303262889|ref|ZP_07348825.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|303265200|ref|ZP_07351112.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|303266565|ref|ZP_07352451.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|303268651|ref|ZP_07354442.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|307068653|ref|YP_003877619.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|29427716|sp|Q8DN92|RNPA_STRR6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122277896|sp|Q04ID0|RNPA_STRP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741396|sp|B5E2W2|RNPA_STRP4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691137|sp|B2IML6|RNPA_STRPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808089|sp|C1CA87|RNPA_STRP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808090|sp|B8ZPA3|RNPA_STRPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808092|sp|C1CGX2|RNPA_STRZJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808093|sp|C1CMY8|RNPA_STRZP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808094|sp|C1CTU8|RNPA_STRZT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15459543|gb|AAL00656.1| Ribonuclease P - protein component [Streptococcus pneumoniae R6]
gi|116076469|gb|ABJ54189.1| ribonuclease P protein component [Streptococcus pneumoniae D39]
gi|147755367|gb|EDK62417.1| ribonuclease P protein component [Streptococcus pneumoniae
SP11-BS70]
gi|147758149|gb|EDK65152.1| ribonuclease P protein component [Streptococcus pneumoniae
SP14-BS69]
gi|147763850|gb|EDK70783.1| ribonuclease P protein component [Streptococcus pneumoniae
SP19-BS75]
gi|147929169|gb|EDK80180.1| ribonuclease P protein component [Streptococcus pneumoniae
SP9-BS68]
gi|147929709|gb|EDK80700.1| ribonuclease P protein component [Streptococcus pneumoniae
SP23-BS72]
gi|172042643|gb|EDT50689.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1873-00]
gi|182630312|gb|ACB91260.1| ribonuclease P [Streptococcus pneumoniae CGSP14]
gi|183570055|gb|EDT90583.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC1087-00]
gi|183571675|gb|EDT92203.1| ribonuclease P protein component [Streptococcus pneumoniae SP195]
gi|183573382|gb|EDT93910.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC0288-04]
gi|183575475|gb|EDT96003.1| ribonuclease P protein component [Streptococcus pneumoniae
CDC3059-06]
gi|183577346|gb|EDT97874.1| ribonuclease P protein component [Streptococcus pneumoniae MLV-016]
gi|194356920|gb|ACF55368.1| ribonuclease P protein component [Streptococcus pneumoniae G54]
gi|220675221|emb|CAR69810.1| ribonuclease P protein component [Streptococcus pneumoniae ATCC
700669]
gi|225720682|gb|ACO16536.1| ribonuclease P protein component [Streptococcus pneumoniae 70585]
gi|225723063|gb|ACO18916.1| ribonuclease P protein component [Streptococcus pneumoniae JJA]
gi|225726113|gb|ACO21965.1| ribonuclease P protein component [Streptococcus pneumoniae P1031]
gi|225727111|gb|ACO22962.1| ribonuclease P protein component [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237135|gb|ADI68266.1| ribonuclease P [Streptococcus pneumoniae TCH8431/19A]
gi|301794977|emb|CBW37441.1| ribonuclease P protein component [Streptococcus pneumoniae INV104]
gi|301802720|emb|CBW35489.1| ribonuclease P protein component [Streptococcus pneumoniae INV200]
gi|302598082|gb|EFL65147.1| ribonuclease P [Streptococcus pneumoniae BS455]
gi|302635972|gb|EFL66471.1| ribonuclease P [Streptococcus pneumoniae SP14-BS292]
gi|302638330|gb|EFL68798.1| ribonuclease P [Streptococcus pneumoniae SP-BS293]
gi|302641816|gb|EFL72172.1| ribonuclease P [Streptococcus pneumoniae BS458]
gi|302643902|gb|EFL74163.1| ribonuclease P [Streptococcus pneumoniae BS457]
gi|302645281|gb|EFL75516.1| ribonuclease P [Streptococcus pneumoniae BS397]
gi|306410190|gb|ADM85617.1| RNase P protein component [Streptococcus pneumoniae AP200]
gi|332071836|gb|EGI82326.1| ribonuclease P protein component [Streptococcus pneumoniae GA17570]
gi|332199117|gb|EGJ13197.1| ribonuclease P protein component [Streptococcus pneumoniae GA41317]
gi|332199189|gb|EGJ13268.1| ribonuclease P protein component [Streptococcus pneumoniae GA47368]
gi|332199473|gb|EGJ13549.1| ribonuclease P protein component [Streptococcus pneumoniae GA47901]
Length = 123
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|294010747|ref|YP_003544207.1| RNase P protein component [Sphingobium japonicum UT26S]
gi|292674077|dbj|BAI95595.1| RNase P protein component [Sphingobium japonicum UT26S]
Length = 136
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ +R F +G P F L V + + R G TVTKK G AV RNRM+RR +
Sbjct: 1 MSRRADFLAANRGRRAPMPGFVLLVRERGDGDPAMRYGITVTKKIGGAVIRNRMKRRFRV 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKNFSRKS 123
R G D+VLI + + + F L + +R+ R R S
Sbjct: 61 LARELLPVHGVAGADHVLIGRSEGIERDFGLLRGELEKALRKVMSRPLGEAPPRRRDS 118
>gi|225181148|ref|ZP_03734594.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT 1]
gi|225168117|gb|EEG76922.1| ribonuclease P protein component [Dethiobacter alkaliphilus AHT 1]
Length = 112
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K ++ V + G+ L +L NN + R GF +KK G AV RNR
Sbjct: 1 MEKKGRITKNSEYQQVFQHGKSVASRGLVLIMLKNNANGN--RTGFITSKKIGNAVIRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+E ++ A + G+D V +A+R A FK+ ++R
Sbjct: 59 VKRLLRETYKMYAADLAT-GYDLVFVARRPAAGFDFKQAAAEMRRVLQR 106
>gi|301067928|ref|YP_003789951.1| RNase P protein component [Lactobacillus casei str. Zhang]
gi|300440335|gb|ADK20101.1| RNase P protein component [Lactobacillus casei str. Zhang]
Length = 183
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 66 LRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 123
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R ++++++ + D+++IA++ A + + + +R
Sbjct: 124 QIKRYIRQSLQELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|222153768|ref|YP_002562945.1| ribonuclease P [Streptococcus uberis 0140J]
gi|254808091|sp|B9DVV7|RNPA_STRU0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222114581|emb|CAR43557.1| ribonuclease P protein component [Streptococcus uberis 0140J]
Length = 119
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L + RVG +V K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFDGGKSTANRKFVIHFLEKEQDHY--RVGISVGKRIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + ++ + + D+V+IA++ + ++E+ + ++
Sbjct: 59 VKRKIRHVIMEFSDHLKRD--DFVVIARKGVENLDYQEVKQNLQHVLK 104
>gi|15674428|ref|NP_268602.1| ribonuclease P [Streptococcus pyogenes M1 GAS]
gi|21263962|sp|Q9A1J4|RNPA_STRP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13621522|gb|AAK33323.1| putative ribonuclease P protein component [Streptococcus pyogenes
M1 GAS]
Length = 119
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQDH--FRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVHSLEYQELQQNLHHVLK 104
>gi|331002961|ref|ZP_08326473.1| ribonuclease P protein component [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413005|gb|EGG92380.1| ribonuclease P protein component [Lachnospiraceae oral taxon 107
str. F0167]
Length = 125
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK F V K G+ + V N S R+G +V+KK G +V R+
Sbjct: 1 MKSFPSLKSNSDFQRVYKNGKSYANKTLVMYVYRNELSYN--RIGISVSKKNGNSVVRHT 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R+++E RL + K G D +++ + A + +L ++ ++
Sbjct: 59 FARKIREIFRLN--KIEKKGLDIIVVVRVGADVSDYHKLEKAYLHLLK 104
>gi|331083517|ref|ZP_08332629.1| ribonuclease P protein component [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404210|gb|EGG83758.1| ribonuclease P protein component [Lachnospiraceae bacterium
6_1_63FAA]
Length = 123
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F LV K G + + + N + R+G +V+KK G +V R+
Sbjct: 1 MKYSESLKKNNDFQLVYKKGTSYANRYLVMYIKENQLNRN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ R ++E+ RL E G+D V++ + + + L + + + R + S +N
Sbjct: 59 LTRLIRESYRLNEEKFC-CGYDIVVVVRVNGKNQNYHSLESALLH-LGRLHKVVRSKEN 115
>gi|323486756|ref|ZP_08092075.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
gi|323399895|gb|EGA92274.1| hypothetical protein HMPREF9474_03826 [Clostridium symbiosum
WAL-14163]
Length = 118
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + G + V+ R+G +V+KK G +V R+
Sbjct: 1 MKKFNSIKKNSDFQKVYRTGRSFANKLLVMYVIK--TEREDTRIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL + +K G D V++A+ A FK++ + ++
Sbjct: 59 ITRLVRESYRLN-KDRVKTGLDIVVVARAAAKESDFKKIESAYLHL 103
>gi|182680229|ref|YP_001834375.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636112|gb|ACB96886.1| ribonuclease P protein component [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 227
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 44/162 (27%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP------------------------ 41
++KRR F KG+ FSL+ + +L
Sbjct: 30 RIRKRRDFLRAAKGKRVHCEAFSLQSIPREPMDLPSKGQDGQDLEKENPTSKASANAAAL 89
Query: 42 -----------RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV--------LKHGHDY 82
R GFTVT+K G AV+RNR+RRRLKEA+R A+ + K GHDY
Sbjct: 90 ASSSGPSGLPARFGFTVTRKTGHAVQRNRIRRRLKEALRHLADTLADPSADLPAKPGHDY 149
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKR-SYYSGKNFSRKS 123
V+IA+ AL +PF +L + + + + + + KS
Sbjct: 150 VIIARPAALAMPFCDLQATLRQALIKVDKAKIHKSETRKNKS 191
>gi|326390365|ref|ZP_08211924.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
gi|325993642|gb|EGD52075.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus JW
200]
Length = 116
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I +KK +F V F + N+ RVG++V+KK G +V RNR+RR
Sbjct: 4 KIIKIKKSYEFKKVYSNGKSVANQFVVMYYM-ENNLGFNRVGYSVSKKIGKSVVRNRVRR 62
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
L E+ RL + +K G D + +A+ + F L N + + K Y+G
Sbjct: 63 LLHESFRL-LDIEIKTGFDIIFVARGKIVEADFHTLKNSMRKLI--MKTPLYAGNER 116
>gi|302672312|ref|YP_003832272.1| ribonuclease P protein component RnpA [Butyrivibrio proteoclasticus
B316]
gi|302396785|gb|ADL35690.1| ribonuclease P protein component RnpA [Butyrivibrio proteoclasticus
B316]
Length = 116
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ + L V N S+ ++G + +KK G ++ R+R
Sbjct: 1 MLFSESMKKTSEFRNVYENGKSYANKYIVLYVWENGRSDN--KLGISCSKKIGNSIVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R ++E+ RL E V G D V++A+ A F ++ + + + G
Sbjct: 59 FARLVRESYRL-QENVFNSGLDIVIVARACARDASFFDIQESLLSLAGKARIKKNGG 114
>gi|313111479|ref|ZP_07797280.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
gi|310883782|gb|EFQ42376.1| ribonuclease P protein component [Pseudomonas aeruginosa 39016]
Length = 134
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 10 RLLTTRQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 70 RESFRHNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 121
>gi|319408959|emb|CBI82616.1| ribonuclease P protein component [Bartonella schoenbuchensis R1]
Length = 123
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LE+ + + RVGFTVT+K G
Sbjct: 1 MKQKHPCRIRKRADFLAVRTGEKRRGPLFLLEIKPREQTAEIKHPLVARVGFTVTRKNGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR-RNKRS 112
AV+RNR++RRL+EAVR+ + ++ G DYV++A DAL PF L N R++ + K
Sbjct: 61 AVKRNRIKRRLREAVRVGLKDNIEAGTDYVIVAHPDALHAPFSSLINELNRRIKPKIKNQ 120
Query: 113 YYS 115
Sbjct: 121 QRQ 123
>gi|325567644|ref|ZP_08144311.1| ribonuclease P protein component [Enterococcus casseliflavus ATCC
12755]
gi|325159077|gb|EGC71223.1| ribonuclease P protein component [Enterococcus casseliflavus ATCC
12755]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + G F + VL S+ RVG +V KK G AV+RN
Sbjct: 9 MRKSYRVKTEQDFQKVFQAGNSFANRKFVVYVLPKEQSH--FRVGLSVGKKVGNAVKRNE 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ KE+ ++ ++ K
Sbjct: 67 VKRKIRASLTEMKPRI-EPAIDFIVIARPSIATCSSKEIYSNLEHVLKLAK 116
>gi|168183725|ref|ZP_02618389.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|237797104|ref|YP_002864656.1| ribonuclease P [Clostridium botulinum Ba4 str. 657]
gi|259494101|sp|C3KWJ9|RNPA_CLOB6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|182673212|gb|EDT85173.1| ribonuclease P protein component [Clostridium botulinum Bf]
gi|229263703|gb|ACQ54736.1| ribonuclease P protein component [Clostridium botulinum Ba4 str.
657]
Length = 111
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K ++F V + G+ L V N + R+G +V+KK G +V RN+++
Sbjct: 2 KENKIRKNKEFRHVYRRGKSYSNKLLVLYVCKNRYNIN--RLGVSVSKKVGKSVVRNKVK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL + +K G+D V IA+ + +K++ + + +++
Sbjct: 60 RLIKESYRLNLDKDMKRGYDLVFIARNSSNDKDYKDIESALINLLKKA 107
>gi|251783354|ref|YP_002997659.1| ribonuclease P [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391986|dbj|BAH82445.1| ribonuclease P protein component [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323128078|gb|ADX25375.1| ribonuclease P [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 119
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG + KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKAGKSTANRKFVIYHLAKD--QKHFRVGISAGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + + EL + ++
Sbjct: 59 VKRKIRHVLMALGNQLKSE--DFVVIARKGVETLDYHELQQNLHHVLK 104
>gi|118443844|ref|YP_876975.1| ribonuclease P [Clostridium novyi NT]
gi|166226715|sp|A0PX73|RNPA_CLONN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118134300|gb|ABK61344.1| ribonuclease P protein component [Clostridium novyi NT]
Length = 113
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V + G+ L V NNN+ RVG +V+KK G +V R+R
Sbjct: 1 MKKNERIRKNIEFRRVYRRGKSYSNSLLVLYVFKNNNNVDTSRVGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL + K +D V +A+ + +KE+ ++R
Sbjct: 61 VKRLISESYRLNCSNI-KEKYDLVFVARNKSKDKTYKEIEGSVTNLLKRA 109
>gi|16081157|ref|NP_391985.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221312088|ref|ZP_03593935.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. 168]
gi|221316413|ref|ZP_03598218.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221321326|ref|ZP_03602620.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325609|ref|ZP_03606903.1| ribonuclease P [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313666|ref|YP_004205953.1| ribonuclease P [Bacillus subtilis BSn5]
gi|585905|sp|P25814|RNPA_BACSU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|467389|dbj|BAA05235.1| protein component of ribonuclease P [Bacillus subtilis]
gi|2636652|emb|CAB16142.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus subtilis subsp. subtilis str.
168]
gi|320019940|gb|ADV94926.1| ribonuclease P [Bacillus subtilis BSn5]
Length = 116
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDE-LRVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + ++E R
Sbjct: 60 IKRLIRQAFLEEKERLKEK--DYIIIARKPASQLTYEETKKSLQHLFR 105
>gi|332071755|gb|EGI82247.1| ribonuclease P protein component [Streptococcus pneumoniae GA17545]
Length = 123
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|15600762|ref|NP_254256.1| ribonuclease P [Pseudomonas aeruginosa PAO1]
gi|107104670|ref|ZP_01368588.1| hypothetical protein PaerPA_01005749 [Pseudomonas aeruginosa PACS2]
gi|116053720|ref|YP_794047.1| ribonuclease P [Pseudomonas aeruginosa UCBPP-PA14]
gi|254243113|ref|ZP_04936435.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
gi|13878724|sp|Q9HT05|RNPA_PSEAE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122256260|sp|Q02DD9|RNPA_PSEAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9951910|gb|AAG08954.1|AE004968_8 ribonuclease P protein component [Pseudomonas aeruginosa PAO1]
gi|115588941|gb|ABJ14956.1| ribonuclease P protein component [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126196491|gb|EAZ60554.1| ribonuclease P protein component [Pseudomonas aeruginosa 2192]
Length = 135
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 71 RESFRHNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 122
>gi|90419892|ref|ZP_01227801.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
gi|90335933|gb|EAS49681.1| putative ribonuclease P protein component [Aurantimonas
manganoxydans SI85-9A1]
Length = 139
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 1 MSN-ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + + KR +F ++G GP F +E L+ ++ PRVG TVTKK G AV RNR
Sbjct: 9 MPKAVGRMTKRAEFLAARRGRRLNGPSFFIEALDRGDA-APPRVGLTVTKKVGNAVVRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+RRRL+EA+RL + + G DYV++A+RD L +PF++L + RV R K+
Sbjct: 68 IRRRLREAIRLDTQADMAPGIDYVVVARRDVLTLPFEQLKDELSRRVARMKQPQREPAKT 127
Query: 120 SRK 122
R+
Sbjct: 128 ERR 130
>gi|78486535|ref|YP_392460.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
gi|78364821|gb|ABB42786.1| ribonuclease P protein component [Thiomicrospira crunogena XCL-2]
Length = 162
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L + F V + E ++ + N PR+G + K+ +V RNR
Sbjct: 34 PKSLRLLSPQDFQFVFARAEKFSNRHWT--FIVRPNDKSYPRLGLAIAKKQLAKSVWRNR 91
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR---SYYSG 116
++R +E R + + G+D V++ +R + + L F +R+ ++
Sbjct: 92 VKRLARETFRQHKQAL--SGYDIVVLGRRGMQDVDNETLIKSFEHLIRKIQKSGLKDGQP 149
Query: 117 KNFSRKS 123
++KS
Sbjct: 150 MTNTKKS 156
>gi|116628499|ref|YP_821118.1| ribonuclease P [Streptococcus thermophilus LMD-9]
gi|122266906|sp|Q03IQ0|RNPA_STRTD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116101776|gb|ABJ66922.1| RNase P protein component [Streptococcus thermophilus LMD-9]
gi|312279126|gb|ADQ63783.1| Ribonuclease P protein component [Streptococcus thermophilus ND03]
Length = 111
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + L+ N RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYCLDRN--LPHFRVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQLENQ--DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|311070646|ref|YP_003975569.1| ribonuclease P [Bacillus atrophaeus 1942]
gi|310871163|gb|ADP34638.1| ribonuclease P [Bacillus atrophaeus 1942]
Length = 115
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L VL+ ++ R G +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSMANRQFVLYVLDQPEADEF-RAGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++ ++ + + + DY++IA++ A + F+E R
Sbjct: 60 VKRLIRQVLQDEKDKLKQK--DYIIIARKPASQLTFEETKKSLQHLFR 105
>gi|325697376|gb|EGD39262.1| ribonuclease P protein component [Streptococcus sanguinis SK160]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F ++ K G+ F + +L RVG +V+KK G AV RNR
Sbjct: 1 MRKNYRVKSEKDFNVIFKRGQSFANRKFVVYMLEK--EQKHFRVGISVSKKLGNAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + +++ D+V+IA++ + + ++ + + ++ K
Sbjct: 59 IKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELDYHQVEQNLLHVLKIAK 107
>gi|291521108|emb|CBK79401.1| ribonuclease P protein component [Coprococcus catus GD/7]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK R F V G+ R + + V+ N R+G +V+KK G +V R+
Sbjct: 1 MEYSESLKKNRDFKTVYGNGKSRANKYLVMYVMKNGTEKN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ R ++E RL K G D + I + +A I + L + R +N
Sbjct: 59 LTRLIREIYRLNEH-HFKKGLDIIFIVRVNAKKIDYHTLEKALMHVAD-IHRVLEKSRN 115
>gi|302388596|ref|YP_003824418.1| ribonuclease P protein component [Clostridium saccharolyticum WM1]
gi|302199224|gb|ADL06795.1| ribonuclease P protein component [Clostridium saccharolyticum WM1]
Length = 115
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +KK R F V G + + R+G +V++K G +V R+R
Sbjct: 1 MKHFNSIKKNRDFQEVYQNGRSLANKLLVMYIKK--TDRPETRIGISVSRKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++E+ RL +++ G D V++ + A +K + + ++
Sbjct: 59 ITRLIRESFRLHE-DMVETGLDIVVVVRAAAKEENYKTIESAYLHL 103
>gi|307152651|ref|YP_003888035.1| ribonuclease P protein component [Cyanothece sp. PCC 7822]
gi|306982879|gb|ADN14760.1| ribonuclease P protein component [Cyanothece sp. PCC 7822]
Length = 123
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLE-----VLNNNNSNLLPRVGFTVT-KKQGC 53
+ LK+R+ F V K G P + L N+ + G +V+ K
Sbjct: 3 LPQEHRLKRRQDFQKVYKQGGRYSSPHLIIRTLFEAYLENSIGSQPSCFGISVSQKVSKK 62
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++R +++A+R + G V++ + +L ++ + + + +
Sbjct: 63 AVGRNRLKRLIRKAIRQLLPEIA-PGWKVVIVVRAGSLECKYEHFLRELKQLLIKAE 118
>gi|291486744|dbj|BAI87819.1| ribonuclease P [Bacillus subtilis subsp. natto BEST195]
Length = 116
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ ++ RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDE-LRVGLSVSKKIGNAVMRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + F+E R
Sbjct: 60 IKRLIRQAFLEEKERLKEK--DYIIIARKPASQLTFEETKKSLQHLFR 105
>gi|77461962|ref|YP_351469.1| ribonuclease P [Pseudomonas fluorescens Pf0-1]
gi|123602664|sp|Q3K426|RNPA_PSEPF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77385965|gb|ABA77478.1| ribonuclease P protein component [Pseudomonas fluorescens Pf0-1]
Length = 133
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + ++ G D V++A++ + EL HF + +R R+ +
Sbjct: 66 KRLMRESFRLHQDSLV--GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPAVKT 123
Query: 121 R 121
Sbjct: 124 E 124
>gi|94987839|ref|YP_595940.1| ribonuclease P [Streptococcus pyogenes MGAS9429]
gi|94991719|ref|YP_599818.1| ribonuclease P [Streptococcus pyogenes MGAS2096]
gi|166228252|sp|Q1JDN4|RNPA_STRPB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228253|sp|Q1JNK3|RNPA_STRPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|94541347|gb|ABF31396.1| ribonuclease P protein component [Streptococcus pyogenes MGAS9429]
gi|94545227|gb|ABF35274.1| Ribonuclease P protein component [Streptococcus pyogenes MGAS2096]
Length = 119
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKCEKDFQAIFKDGKSTANRKFVIYHLNRGQDH--FRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + D+V+IA++ + ++EL + ++
Sbjct: 59 VKRKIRHVIMALGYQLKSE--DFVVIARKGVESLEYQELQQNLHHVLK 104
>gi|304392413|ref|ZP_07374354.1| ribonuclease P protein component [Ahrensia sp. R2A130]
gi|303295517|gb|EFL89876.1| ribonuclease P protein component [Ahrensia sp. R2A130]
Length = 172
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 23/145 (15%)
Query: 1 MSNI--CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN--------LLPRVGFTVTKK 50
MS + +K+R F +KG F +++ RVGFTVTKK
Sbjct: 19 MSKVQTVRMKRRADFVACRKGSRVSRDAFGIQLRKRKPDELLGPGEKLHHFRVGFTVTKK 78
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN- 109
G AV RNR++RRL+ A G+D V +A AL PF+ L + + +
Sbjct: 79 IGNAVVRNRIKRRLRAASAEITVPESLAGYDAVFMANEPALGAPFQTLTAQMTQGLAKAL 138
Query: 110 ------------KRSYYSGKNFSRK 122
+ + +RK
Sbjct: 139 LREVARLQNPAPRGKTRRDEGRARK 163
>gi|257871386|ref|ZP_05651039.1| ribonuclease P [Enterococcus gallinarum EG2]
gi|257805550|gb|EEV34372.1| ribonuclease P [Enterococcus gallinarum EG2]
Length = 111
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V KG+ F + VL + RVG +V KK G AV+RN
Sbjct: 1 MRKAYRVKTEQDFQKVFQKGKSFANRKFVVYVLQKD--QPHFRVGLSVGKKVGNAVKRNE 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + K D+++IA+ +E+ ++ ++ K
Sbjct: 59 IKRKIRASLTDMQPRI-KPTLDFIVIARPSVSNCSSQEVYSNLEHVLKLAK 108
>gi|327389036|gb|EGE87383.1| ribonuclease P protein component [Streptococcus pneumoniae GA04375]
Length = 123
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + ++ + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KSSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|104774818|ref|YP_619798.1| ribonuclease P [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|116514947|ref|YP_813853.1| ribonuclease P [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|122274321|sp|Q047F7|RNPA_LACDB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122983861|sp|Q1G7Z2|RNPA_LACDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|103423899|emb|CAI98941.1| Ribonuclease P, protein component [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116094262|gb|ABJ59415.1| RNase P protein component [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126647|gb|ADY85977.1| Ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 121
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKSEQDFQTVFENGESVANRAFVIYVLPRKQNKHF-RVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYAHDFDWEKTRENLLHALNLAHVIEEMPNK 118
Query: 119 FSR 121
+
Sbjct: 119 EEK 121
>gi|270293446|ref|ZP_06199654.1| ribonuclease P protein component [Streptococcus sp. M143]
gi|270278108|gb|EFA23957.1| ribonuclease P protein component [Streptococcus sp. M143]
Length = 123
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G F + L N S+ RVG +V+KK G AV RN+
Sbjct: 1 MKKSFRVKREKDFNAIFTDGTSFANRKFVVYQLENQKSH--FRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + L L D+V+IA++ + + E+ + + ++ +K
Sbjct: 59 IKRRIRHIL-LSVREQLADNVDFVVIARKGVEGLDYAEMEKNLLHVLKLSK 108
>gi|119493477|ref|ZP_01624144.1| ribonuclease P [Lyngbya sp. PCC 8106]
gi|119452660|gb|EAW33840.1| ribonuclease P [Lyngbya sp. PCC 8106]
Length = 135
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------------NNSNLLPRVGFTV 47
+ + L + F V +G RK +L L N + R+G ++
Sbjct: 2 LPKVHRLWHPQDFKAVYARGVHRKTSHLTLRALRCSPQPEDQISEILNQTQRATRIGISI 61
Query: 48 T-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ K AV RNR++R+++ A R + G D V++ K A+ + E + +
Sbjct: 62 SQKVSKRAVVRNRIKRQIRAAFRQLLSKLS-SGWDIVIVVKPTAIECNYAEFLQELEQLL 120
>gi|319940012|ref|ZP_08014366.1| ribonuclease P protein component [Streptococcus anginosus 1_2_62CV]
gi|319810726|gb|EFW07053.1| ribonuclease P protein component [Streptococcus anginosus 1_2_62CV]
Length = 119
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKSEKDFNAIFKSGQSFANRKFVIYTLEKK--QKHFRVGISVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + D+V+IA++ F+ ++EL + + ++ K
Sbjct: 59 IKRRIRHVLIAHQAELAT--LDFVVIARKGVEFLTYQELEQNLLHVLKIAK 107
>gi|227543717|ref|ZP_03973766.1| ribonuclease P [Lactobacillus reuteri CF48-3A]
gi|300908782|ref|ZP_07126245.1| ribonuclease P [Lactobacillus reuteri SD2112]
gi|77745309|gb|ABB02555.1| RNase p protein component [Lactobacillus reuteri]
gi|227186285|gb|EEI66356.1| ribonuclease P [Lactobacillus reuteri CF48-3A]
gi|300894189|gb|EFK87547.1| ribonuclease P [Lactobacillus reuteri SD2112]
Length = 117
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVVYQMEKP-GQKHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++ + + + D+++IA+ A + E + V ++R ++
Sbjct: 60 VKRRIRQTLLEVKPQL-RSDVDFLVIARPAADGLSMAETKKNLVHVLKRAHLLDEKSED 117
>gi|326202770|ref|ZP_08192637.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
gi|325986847|gb|EGD47676.1| ribonuclease P protein component [Clostridium papyrosolvens DSM
2782]
Length = 121
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK +FA V KG G + ++ +L N S R+G +V+KK G AV RNR
Sbjct: 1 MKKTVTLKKNYEFARVFNKGSFYVGRYITVYILPNKQS--FNRIGISVSKKAGKAVIRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R E + +G D V+ A+ F+ + +++ +
Sbjct: 59 KKRLIRESYR-YFEDYISNGFDIVVAARSGESVPTFRAVLKEIKYLLKKLQ 108
>gi|167748058|ref|ZP_02420185.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|317472416|ref|ZP_07931741.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
gi|167652050|gb|EDR96179.1| hypothetical protein ANACAC_02802 [Anaerostipes caccae DSM 14662]
gi|316900136|gb|EFV22125.1| ribonuclease P [Anaerostipes sp. 3_2_56FAA]
Length = 115
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + L+ ++F V K G+ + + L N R G +V+KK G +V R+R
Sbjct: 1 MKHYHSLRTTKEFQQVYKTGKSKANRYLVLYC--RENQLNYNRFGISVSKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ R L+E+ RL K G D V+IA+ F + + + + + R K+
Sbjct: 59 VTRLLRESYRLRESE-FKQGFDLVVIARNTVKDEGFHTVESALLHLM-KLHRLKRDEKH 115
>gi|227529864|ref|ZP_03959913.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
gi|227350233|gb|EEJ40524.1| ribonuclease P [Lactobacillus vaginalis ATCC 49540]
Length = 118
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V K+ G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVIYQMAKP-GQKHFRVGISVGKRIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++ + + + D+++IA+ A + E + V ++R ++
Sbjct: 60 VKRRIRQTLLEVKPYL-RQDVDFLVIARPAADGLEMAETKKNLVHALKRAHLLEEKSED 117
>gi|238917979|ref|YP_002931496.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
gi|238873339|gb|ACR73049.1| ribonuclease P protein component [Eubacterium eligens ATCC 27750]
Length = 121
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L+ ++F V + + + N R+G +V+KK G ++ R+R+
Sbjct: 10 KDFETLRSNQEFKKVYNNKKSFANKNLIMYISENGTDTK--RLGVSVSKKVGNSIVRHRL 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R ++EA RL + + G+DYV++A+ F E + ++ +K
Sbjct: 68 ARLIREAFRL-STDCIPDGYDYVVVARASLKDKGFFETKESMIHLLKLHK 116
>gi|116493572|ref|YP_805307.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
gi|122264964|sp|Q03D57|RNPA_PEDPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116103722|gb|ABJ68865.1| RNase P protein component [Pediococcus pentosaceus ATCC 25745]
Length = 119
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + V++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKELEFQKVFETRNSFANKKFVVYVMDKPE-QPHFRVGISVGKKIGNAVMRNY 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RR+++++ L + +L+ D+++IA+ A +P E+ +
Sbjct: 60 TKRRIRQSI-LEFKPLLRQDVDFLVIARPQASGLPMNEVKQQLEHVFK 106
>gi|154688210|ref|YP_001423371.1| ribonuclease P [Bacillus amyloliquefaciens FZB42]
gi|166226700|sp|A7ZAW4|RNPA_BACA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|154354061|gb|ABS76140.1| RnpA [Bacillus amyloliquefaciens FZB42]
Length = 116
Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKRGTSMANRQFVLYTLDQPKQEE-LRVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R +++AV+ E + D+++IA++ A + F+E R+
Sbjct: 60 VKRLIRQAVQEEKELLKPK--DFIIIARKPAGDLSFEETKKSLQHLFRK 106
>gi|240850504|ref|YP_002971903.1| ribonuclease P [Bartonella grahamii as4aup]
gi|240267627|gb|ACS51215.1| ribonuclease P [Bartonella grahamii as4aup]
Length = 130
Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LEV + + RVGFTVT+K G
Sbjct: 1 MKKKHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTTERKDSLVARVGFTVTRKNGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR-RNKRS 112
AV+RNR++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++ + K
Sbjct: 61 AVKRNRIKRRLREAVRVGVTNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIKPKIKHQ 120
Query: 113 YYSG 116
Sbjct: 121 QQQQ 124
>gi|325275327|ref|ZP_08141280.1| ribonuclease P [Pseudomonas sp. TJI-51]
gi|324099575|gb|EGB97468.1| ribonuclease P [Pseudomonas sp. TJI-51]
Length = 133
Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L N PR+G + KK AV+RNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++++ RL + + G D V++A++ + EL HF + +R RS +
Sbjct: 66 KRLMRDSFRLNQQSLA--GLDIVIVARKGLGEVENPELHQHFGKLWKRLARSRPAP 119
>gi|329888538|ref|ZP_08267136.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
gi|328847094|gb|EGF96656.1| ribonuclease P protein component [Brevundimonas diminuta ATCC
11568]
Length = 138
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I L +R QF KG + ++ L+ + + R+GFT T+K G AV RNR +R
Sbjct: 2 KIDRLLRRPQFLAAAKGVSQARGAVVVQQLDRADGDPTVRLGFTATRKIGGAVVRNRAKR 61
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RL+EA RL + G DYV IA+ + L + + R +
Sbjct: 62 RLREAARLLTPLHGRAGCDYVFIARMGTADRDWDRLLDDVKSALTRLATPRTASD 116
>gi|322374155|ref|ZP_08048689.1| ribonuclease P protein component [Streptococcus sp. C150]
gi|321277121|gb|EFX54192.1| ribonuclease P protein component [Streptococcus sp. C150]
Length = 111
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + LN + + RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRIKKEKDFKALFDAGHSVANRKFVVYCLNRDLLHY--RVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++E+ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQLEHQ--DFVVIARKGVEDLSYQEIYSNLVHVLKIAK 107
>gi|299143465|ref|ZP_07036545.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517950|gb|EFI41689.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 110
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 7 LKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V ++ N N RVGFT+TKK G AV RN+++RRL+
Sbjct: 9 LKKNIDFQRVYAKRNINGNKNLTVFFKKNGLDNK--RVGFTITKKIGNAVIRNKIKRRLR 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
E RL +L G+DYV + K+ + + +KEL F+ ++ +
Sbjct: 67 EIYRLNF-DILPEGYDYVFVVKKTCVDLSYKELEKSFIHLSKKLR 110
>gi|295402124|ref|ZP_06812083.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112755|ref|YP_003991071.1| ribonuclease P [Geobacillus sp. Y4.1MC1]
gi|294975807|gb|EFG51426.1| ribonuclease P protein component [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217856|gb|ADP76460.1| ribonuclease P protein component [Geobacillus sp. Y4.1MC1]
Length = 116
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V +G F + +L+ R+G +V+KK G AV RNR++R +++A
Sbjct: 12 EFQEVFQRGTSMANRQFVIYMLDRPE-QPYFRIGLSVSKKLGKAVVRNRIKRYIRQAFLE 70
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ +L G DYV+IA+ A + + E+ + + +R+ K
Sbjct: 71 MKDDIL-PGKDYVIIARLPAADMTYFEVKSSLLHVLRKAGALKRERK 116
>gi|108802371|ref|YP_642568.1| ribonuclease P [Mycobacterium sp. MCS]
gi|119866064|ref|YP_936016.1| ribonuclease P [Mycobacterium sp. KMS]
gi|126438351|ref|YP_001074042.1| ribonuclease P [Mycobacterium sp. JLS]
gi|123177783|sp|Q1B0S2|RNPA_MYCSS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226724|sp|A3Q8S4|RNPA_MYCSJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226725|sp|A1U8R8|RNPA_MYCSK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|108772790|gb|ABG11512.1| ribonuclease P protein component [Mycobacterium sp. MCS]
gi|119692153|gb|ABL89226.1| ribonuclease P protein component [Mycobacterium sp. KMS]
gi|126238151|gb|ABO01552.1| ribonuclease P protein component [Mycobacterium sp. JLS]
Length = 118
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + + +F+ V KG P L + N + PRVG V K G AV R+R
Sbjct: 2 LPARYRMTRSTEFSTTVSKGVRSAQPDLVLHMANVLDDPSGPRVGLVVAKSVGNAVVRHR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ RRL+ +V + + + GH V+ A A L +RR + +
Sbjct: 62 VSRRLRHSVHPMLDEL-QPGHRLVIRALPGAASATSARLHQELSAALRRARPRVEAS 117
>gi|148989739|ref|ZP_01821048.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
gi|147924855|gb|EDK75938.1| ribonuclease P protein component [Streptococcus pneumoniae
SP6-BS73]
Length = 127
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 8 KKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
K+ + F + K G F + L N RVG +V+KK G AV RN+++RR++
Sbjct: 12 KREKDFKAIFKEGTSFANRKFVVYQLEN--QKNHFRVGLSVSKKLGNAVTRNQIKRRIRH 69
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
++ ++ D+V+IA++ + + E+ + + + + + Y G +++
Sbjct: 70 IIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYREGNGSEKET 124
>gi|312901299|ref|ZP_07760582.1| ribonuclease P protein component [Enterococcus faecalis TX0470]
gi|311291676|gb|EFQ70232.1| ribonuclease P protein component [Enterococcus faecalis TX0470]
Length = 120
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V + F + VL RVG +V KK G AV RN
Sbjct: 3 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKP-QQAHFRVGISVGKKIGNAVTRNA 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 62 VKRKIRASLFQLKDRISPE-IDFIVIARPGLEKLSSEEVEANLTHVLNLAK 111
>gi|146319669|ref|YP_001199381.1| ribonuclease P [Streptococcus suis 05ZYH33]
gi|146321864|ref|YP_001201575.1| ribonuclease P [Streptococcus suis 98HAH33]
gi|145690475|gb|ABP90981.1| RNase P protein component [Streptococcus suis 05ZYH33]
gi|145692670|gb|ABP93175.1| RNase P protein component [Streptococcus suis 98HAH33]
gi|292559285|gb|ADE32286.1| RNaseP protein [Streptococcus suis GZ1]
Length = 133
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 15 LKKSYRVKRERDFNDIFTKGNNVANRRFVVYRL--PKEQKHFRVGLSVSKKLGNAVMRNK 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 73 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 121
>gi|218894671|ref|YP_002443541.1| ribonuclease P [Pseudomonas aeruginosa LESB58]
gi|226736872|sp|B7V7A6|RNPA_PSEA8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218774900|emb|CAW30719.1| ribonuclease P protein component [Pseudomonas aeruginosa LESB58]
Length = 135
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V + K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPIGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 71 RESFRHNQETLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 122
>gi|259502132|ref|ZP_05745034.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
gi|259169945|gb|EEW54440.1| ribonuclease P protein component [Lactobacillus antri DSM 16041]
Length = 118
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFIIYQMAKP-GQKHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++++ + + D+++IA+ A + E+ + V ++R +
Sbjct: 60 VKRRIRQSLLEVKPQL-RSDVDFLVIARPAADGLEMAEVKKNLVHALKRANLFKEKSEE 117
>gi|163757864|ref|ZP_02164953.1| ribonuclease P [Hoeflea phototrophica DFL-43]
gi|162285366|gb|EDQ35648.1| ribonuclease P [Hoeflea phototrophica DFL-43]
Length = 142
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LK R F V+KG +GPFF LE L+ ++ PR+G+TVTKKQG AVERNRMR
Sbjct: 9 KKPGRLKNRPDFLAVQKGTRLRGPFFLLETLDRGLADKAPRIGYTVTKKQGNAVERNRMR 68
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+EAVR A + GHDYV++A+RD L PF L R + S S + +
Sbjct: 69 RRLREAVRHLAGVPFRPGHDYVVVARRDTLKAPFDRLVQALS---ERVQDSVTSPRPRHK 125
Query: 122 KS 123
+S
Sbjct: 126 RS 127
>gi|296392436|ref|ZP_06881911.1| ribonuclease P [Pseudomonas aeruginosa PAb1]
Length = 135
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 71 RESFRHNQEVLA--GWDIVVIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 122
>gi|291561649|emb|CBL40448.1| ribonuclease P protein component [butyrate-producing bacterium
SS3/4]
Length = 114
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK + F V + G+ + + V+++ + R+G + +KK G +V R+R
Sbjct: 1 MKRFNSLKKNQDFQTVYRRGKSYANKYLVMYVMDSGRED--TRIGISASKKVGNSVVRHR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
R ++E+ RL + +L+ G D +++A+ A F ++ + F+
Sbjct: 59 FARLVRESFRLN-KDILEEGKDIIVVARAAAKDKNFDKIESAFLHL 103
>gi|330964183|gb|EGH64443.1| ribonuclease P [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 133
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L NN PR+G + KK +VERNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + ++ G D ++A++ + EL HF + +R RS + S
Sbjct: 66 KRLMRESFRQHQDSLV--GWDIAIVARKGLGDVENPELIQHFGKLWKRLARSRPIPEEKS 123
Query: 121 RKS 123
+
Sbjct: 124 EPA 126
>gi|169825325|ref|YP_001692936.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302380136|ref|ZP_07268609.1| ribonuclease P protein component [Finegoldia magna ACS-171-V-Col3]
gi|303234472|ref|ZP_07321110.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
gi|238687765|sp|B0S3V6|RNPA_FINM2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|167832130|dbj|BAG09046.1| ribonuclease P protein component [Finegoldia magna ATCC 29328]
gi|302312078|gb|EFK94086.1| ribonuclease P protein component [Finegoldia magna ACS-171-V-Col3]
gi|302494427|gb|EFL54195.1| ribonuclease P protein component [Finegoldia magna BVS033A4]
Length = 113
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R++ +V K G+ FSL V NS R+GF+VTKK G AVERNR
Sbjct: 1 MDKSVRLRDNREYNVVYKRGKTYYNRNFSLVVY---NSKKGTRIGFSVTKKYGNAVERNR 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L+E VRL K G D V+I K++ + +K+L + + R+
Sbjct: 58 IKRKLREIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQLESALLHVCRKASNKK 110
>gi|323137578|ref|ZP_08072655.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
gi|322397204|gb|EFX99728.1| ribonuclease P protein component [Methylocystis sp. ATCC 49242]
Length = 148
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGCAVE 56
L++R F K G F+++++ + PR GFTVT+K AV
Sbjct: 18 RLRRRADFVRASKTGARFSARLFTVQMVRQPDDGAGKDAAPAAPPRFGFTVTRKVAGAVG 77
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RNR+RRRLKEA+R+ + G DYV +A+R L PF ++ + E R +
Sbjct: 78 RNRIRRRLKEALRVSGASGAREGRDYVFVARRGTLTAPFNDIISQMAEGFARLEERGAGA 137
Query: 117 KNFSRK 122
+ +
Sbjct: 138 RRKQKD 143
>gi|157829706|pdb|1A6F|A Chain A, Rnase P Protein From Bacillus Subtilis
Length = 119
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F V K G F L L+ ++ RVG +V+KK G AV RNR
Sbjct: 4 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDE-LRVGLSVSKKIGNAVMRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + ++E R
Sbjct: 63 IKRLIRQAFLEEKERLKEK--DYIIIARKPASQLTYEETKKSLQHLFR 108
>gi|15901863|ref|NP_346467.1| ribonuclease P [Streptococcus pneumoniae TIGR4]
gi|111658726|ref|ZP_01409363.1| hypothetical protein SpneT_02000139 [Streptococcus pneumoniae
TIGR4]
gi|21263957|sp|Q97NI5|RNPA_STRPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14973553|gb|AAK76107.1| ribonuclease P protein component [Streptococcus pneumoniae TIGR4]
Length = 123
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L N RVG +V+KK G AV RN+
Sbjct: 1 MKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLEN--QKNRFRVGLSVSKKLGNAVTRNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RR++ ++ ++ D+V+IA++ + + E+ + + + + + Y G
Sbjct: 59 IKRRIRHIIQNAKGSLV-EDVDFVVIARKGVETLGYAEMEKNLLHVL-KLSKIYREGNGS 116
Query: 120 SRKS 123
+++
Sbjct: 117 EKET 120
>gi|229824629|ref|ZP_04450698.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC 51271]
gi|229786000|gb|EEP22114.1| hypothetical protein GCWU000282_01976 [Catonella morbi ATCC 51271]
Length = 115
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V + L V RVG +V K+ G AV RN+
Sbjct: 1 MKKAYRIKKEREFQHVYHHAQTYANRQLVLYVYPKPE-QAHFRVGLSVGKRIGNAVMRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R L+++++ + H +DY+LIA+ D + +
Sbjct: 60 VKRYLRQSLQDLEHEI-PHEYDYLLIARPDIKDKDQATVRQSLRHVM 105
>gi|580904|emb|CAA44400.1| unnamed protein product [Bacillus subtilis]
Length = 119
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F V K G F L L+ ++ RVG +V+KK G AV RNR
Sbjct: 4 LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDE-LRVGLSVSKKIGNAVMRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A E + + DY++IA++ A + ++E R
Sbjct: 63 IKRLIRQAFLEEKERLKEK--DYIIIARKPASQLTYEETKKSLQHLFR 108
>gi|229551108|ref|ZP_04439833.1| ribonuclease P [Lactobacillus rhamnosus LMS2-1]
gi|229315569|gb|EEN81542.1| ribonuclease P [Lactobacillus rhamnosus LMS2-1]
Length = 170
Score = 81.3 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 53 LRKSYRIKKEVEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 110
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + E + + +R
Sbjct: 111 QIKRYIRQSLLELKPEIDPQ-TDFLVIARKSANQLDMAETKKNLIHVMR 158
>gi|167031022|ref|YP_001666253.1| ribonuclease P [Pseudomonas putida GB-1]
gi|254808083|sp|B0KEU7|RNPA_PSEPG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166857510|gb|ABY95917.1| ribonuclease P protein component [Pseudomonas putida GB-1]
Length = 134
Score = 81.3 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L N PR+G + KK AV+RNR+
Sbjct: 7 SREKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++++ RL + + G D V++A++ I EL HF + +R RS +
Sbjct: 67 KRLMRDSFRLNQQSLA--GLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTP 120
>gi|218437891|ref|YP_002376220.1| ribonuclease P [Cyanothece sp. PCC 7424]
gi|226736857|sp|B7KHE3|RNPA_CYAP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218170619|gb|ACK69352.1| ribonuclease P protein component [Cyanothece sp. PCC 7424]
Length = 129
Score = 81.3 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL-----NNNNSNLLPRVGFTVT-KKQGC 53
+ LK+R+ F V K G P + L N+ ++ G +V+ K
Sbjct: 3 LPQEHRLKRRKDFQKVYKQGGRYTSPHLIIRTLFESCSENSLNSQPTCFGISVSQKVSKK 62
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++R +++A+R + G V++ + ++ + + + + +
Sbjct: 63 AVIRNRIKRLIRQAIRELLPQISN-GWKVVIVIRPGSVECKYDRFLRELKQLLIKAE 118
>gi|315222385|ref|ZP_07864290.1| ribonuclease P protein component [Streptococcus anginosus F0211]
gi|315188546|gb|EFU22256.1| ribonuclease P protein component [Streptococcus anginosus F0211]
Length = 119
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKSEKDFNAIFKSGQSFANRKFVIYTLEKK--QKHFRVGISVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + + + D+V+IA++ + ++EL + + ++ K
Sbjct: 59 IKRRIRHVLIVHQAELAT--LDFVVIARKGVEILTYQELEQNLLHVLKIAK 107
>gi|270289894|ref|ZP_06196120.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304385853|ref|ZP_07368197.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
gi|270281431|gb|EFA27263.1| ribonuclease P [Pediococcus acidilactici 7_4]
gi|304328357|gb|EFL95579.1| ribonuclease P protein component [Pediococcus acidilactici DSM
20284]
Length = 119
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V + F + V++ RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEKEFQEVFETRNSFANKKFVVYVMDKP-GQPHFRVGISVGKKIGNAVMRNY 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
M+RR+++++ L + +L+ D+++IA+ A +P KE+ +
Sbjct: 60 MKRRIRQSI-LEFKPLLRSDVDFLVIARPQASGLPMKEVKRQLEHVFK 106
>gi|49474530|ref|YP_032572.1| ribonuclease P [Bartonella quintana str. Toulouse]
gi|60390410|sp|Q6FZ17|RNPA_BARQU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49240034|emb|CAF26453.1| Ribonuclease p protein component [Bartonella quintana str.
Toulouse]
Length = 133
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LEV + + + RVGFTVT+K G
Sbjct: 4 MKRKHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAGIKSPLVARVGFTVTRKNGN 63
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV+RNR++RRL+EAVR+ ++ G DYV++A DAL PF L + R++ +
Sbjct: 64 AVKRNRIKRRLREAVRVGLTDDIEAGTDYVIVAHSDALHAPFTFLISELSRRIKPKTKHQ 123
Query: 114 YSGKNF 119
+
Sbjct: 124 KRQQGN 129
>gi|315650196|ref|ZP_07903271.1| ribonuclease P protein component [Eubacterium saburreum DSM 3986]
gi|315487553|gb|EFU77861.1| ribonuclease P protein component [Eubacterium saburreum DSM 3986]
Length = 117
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N LK F V K G+ + V N + R+G +V+KK G +V R+
Sbjct: 1 MKNFPSLKSNTDFQRVYKNGKSYANKALVMYVYENALTYN--RIGISVSKKNGNSVVRHT 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R+L+E RL + K G D +++ + A + +L + ++ ++
Sbjct: 59 FVRKLREIFRLN--KIEKKGLDIIVVVRVGADVKDYHKLESAYLHLLK 104
>gi|289579534|ref|YP_003478161.1| ribonuclease P protein component [Thermoanaerobacter italicus Ab9]
gi|297545656|ref|YP_003677958.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289529247|gb|ADD03599.1| ribonuclease P protein component [Thermoanaerobacter italicus Ab9]
gi|296843431|gb|ADH61947.1| ribonuclease P protein component [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 116
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +KK +F V F + N+ RVG++V+KK G +V RNR+RR
Sbjct: 4 KVVKIKKSYEFKKVYSNGKSTANQFVVMYYM-ENNLGFNRVGYSVSKKIGKSVVRNRVRR 62
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L E+ RL + +K G D + +A+ + F L + + + +
Sbjct: 63 LLHESFRL-LDIEIKKGFDIIFVARGKIVEADFHTLKSSMRKLIMK 107
>gi|223933966|ref|ZP_03625924.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|253752666|ref|YP_003025807.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|253754492|ref|YP_003027633.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|253756425|ref|YP_003029565.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|223897358|gb|EEF63761.1| ribonuclease P protein component [Streptococcus suis 89/1591]
gi|251816955|emb|CAZ52604.1| ribonuclease P protein component [Streptococcus suis SC84]
gi|251818889|emb|CAZ56732.1| ribonuclease P protein component [Streptococcus suis BM407]
gi|251820738|emb|CAR47500.1| ribonuclease P protein component [Streptococcus suis P1/7]
gi|319759083|gb|ADV71025.1| ribonuclease P [Streptococcus suis JS14]
Length = 119
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYRVKRERDFNDIFTKGNNVANRRFVVYRL--PKEQKHFRVGLSVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 59 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 107
>gi|108805994|ref|YP_645931.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
gi|108767237|gb|ABG06119.1| ribonuclease P protein component [Rubrobacter xylanophilus DSM
9941]
Length = 114
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +F V + G + +G FS+ N PR+G +V++K G AV RN +R
Sbjct: 5 RSTRLTDSPEFERVYRQGRVYRGRLFSVHAF--PNDLGHPRLGLSVSRKVGGAVTRNTVR 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRL+E + G D+V+ A+ A F+EL F +RR
Sbjct: 63 RRLREVFFASVGE-GEGGLDFVISARPAAAEASFQELLAEFGRALRRL 109
>gi|332983467|ref|YP_004464908.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
gi|332701145|gb|AEE98086.1| ribonuclease P protein component [Mahella australiensis 50-1 BON]
Length = 118
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ R++ +V + G+ L N SN R GF+V+KK G +V RNR+R
Sbjct: 6 KDNRLRHNREYRVVYRAGKSVANKDMVLYFAKNKQSN--VRAGFSVSKKIGKSVVRNRVR 63
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KEA RL + K G+D + IA+ + + ++ ++ +++
Sbjct: 64 RLIKEAFRLHINDI-KPGYDLIFIARTGNKSLKYADVERAVLDVLKKA 110
>gi|319891292|ref|YP_004148167.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
gi|317160988|gb|ADV04531.1| Ribonuclease P protein component [Staphylococcus pseudintermedius
HKU10-03]
Length = 115
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F L+ KG+ F + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNADFQLIYRKGKSVANRQFVVYTYETQTLTHF-RLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E +L D ++IA+ A + E+ ++ K
Sbjct: 60 IKRSIRECFKVHKEDILPK--DIIVIARFPAKTMSTAEIQKSLEHVLKIAK 108
>gi|195977383|ref|YP_002122627.1| ribonuclease P [Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|225869298|ref|YP_002745246.1| ribonuclease P protein component [Streptococcus equi subsp.
zooepidemicus]
gi|238689791|sp|B4U0S7|RNPA_STREM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494116|sp|C0MFG8|RNPA_STRS7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|195974088|gb|ACG61614.1| ribonuclease P protein component RnpA [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225702574|emb|CAX00576.1| ribonuclease P protein component [Streptococcus equi subsp.
zooepidemicus]
Length = 119
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + R G +V KK G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFKLGQSMANRKFVIYHLK--GEHKHFRAGISVGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+++ + + + D+V+IA+R A + ++ + + + + + G
Sbjct: 59 VKRKIRHVLMELGDHLKTE--DFVVIARRGAEELDYQAVKQNLHHVL-KLAKLLEEGFEI 115
Query: 120 SRKS 123
+KS
Sbjct: 116 EKKS 119
>gi|114706828|ref|ZP_01439728.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
gi|114537776|gb|EAU40900.1| ribonuclease P [Fulvimarina pelagi HTCC2506]
Length = 128
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M+ L KR +F ++G GP+F +E L + PR G TVTKK G AV RNR+
Sbjct: 1 MTKAGRLTKRSEFLAARRGRRLNGPYFFIETLVRGDDE-PPRFGLTVTKKVGNAVARNRI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRL+EA+R A +++G DYV++A+RD L + F L + R R +
Sbjct: 60 RRRLREAIRTAAGSEMRNGVDYVIVARRDVLNVAFVTLKDELSRRFSRFDPAKSGPSKNQ 119
Query: 121 RK 122
R+
Sbjct: 120 RQ 121
>gi|116496324|ref|YP_808058.1| RNase P protein component [Lactobacillus casei ATCC 334]
gi|116106474|gb|ABJ71616.1| RNase P protein component [Lactobacillus casei ATCC 334]
Length = 183
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 66 LRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 123
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + + + +R
Sbjct: 124 QIKRYIRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|15896969|ref|NP_350318.1| ribonuclease P [Clostridium acetobutylicum ATCC 824]
gi|21263956|sp|Q97CV8|RNPA_CLOAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15026845|gb|AAK81658.1|AE007868_14 RnpA, ribonuclease P protein component [Clostridium acetobutylicum
ATCC 824]
gi|325511146|gb|ADZ22782.1| ribonuclease P [Clostridium acetobutylicum EA 2018]
Length = 119
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K +F V KG+ L V N + R+G +V+KK G +V R+R++
Sbjct: 2 KENRIRKNAEFRRVYRKGKSFSNRLLVLYVYKNYILKDINRIGISVSKKVGKSVVRSRVK 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + E+ RL + + K GHD+V+IA+ + ++ + +
Sbjct: 62 RLIGESYRLNSSNL-KKGHDFVIIARTACNGKRYSDIEDSIKNLFNKA 108
>gi|313887636|ref|ZP_07821318.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846245|gb|EFR33624.1| ribonuclease P protein component [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 111
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK +F V + G + NN PR G T TKK G AV RN +RRRLK
Sbjct: 6 LKKNSEFQRVYSNKKISGSRYITLFTAKNN-RDYPRFGITATKKVGNAVNRNFIRRRLKH 64
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R + + K G+DYV +AK+DA FK+ N F ++R K+
Sbjct: 65 LLRENSHNI-KPGYDYVFVAKKDACDSDFKDFKNSFFSVLKRQKK 108
>gi|116334865|ref|YP_796392.1| ribonuclease P [Lactobacillus brevis ATCC 367]
gi|122268456|sp|Q03N61|RNPA_LACBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116100212|gb|ABJ65361.1| RNase P protein component [Lactobacillus brevis ATCC 367]
Length = 118
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQQVFETRNSVANRQFVVYSMEKP-QQPHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ LK D+++IA+ A I + V ++ K
Sbjct: 60 VKRRIRQSLLELKP-HLKQDVDFLVIARPRADGISMTDAKRSLVHVLKLAK 109
>gi|26986753|ref|NP_742178.1| ribonuclease P [Pseudomonas putida KT2440]
gi|148550511|ref|YP_001270613.1| ribonuclease P [Pseudomonas putida F1]
gi|166991079|sp|A5WBB9|RNPA_PSEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24981343|gb|AAN65642.1|AE016190_8 ribonuclease P protein component [Pseudomonas putida KT2440]
gi|148514569|gb|ABQ81429.1| ribonuclease P protein component [Pseudomonas putida F1]
gi|313496416|gb|ADR57782.1| RnpA [Pseudomonas putida BIRD-1]
Length = 134
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L N PR+G + KK AV+RNR+
Sbjct: 7 SREKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++++ RL + + G D V++A++ I EL HF + +R RS +
Sbjct: 67 KRLMRDSFRLNQQLLA--GLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTP 120
>gi|218512685|ref|ZP_03509525.1| ribonuclease P [Rhizobium etli 8C-3]
Length = 96
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/83 (59%), Positives = 59/83 (71%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK R QF V++GE R+G F LEVL+ + RVGFTVTKK G AVERNRMRRR
Sbjct: 14 VGRLKSRPQFLAVREGEKRRGGLFLLEVLDRKEPDSQARVGFTVTKKHGNAVERNRMRRR 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIA 86
LKEAVRL A ++ GHDYV++A
Sbjct: 74 LKEAVRLHAGFAMQPGHDYVVVA 96
>gi|169334990|ref|ZP_02862183.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
gi|169257728|gb|EDS71694.1| hypothetical protein ANASTE_01396 [Anaerofustis stercorihominis DSM
17244]
Length = 121
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 4 ICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK F V + L N R+GF+++KK G AV RN+++R
Sbjct: 1 MQRLKKSIDFKKVYNNKKSIANRHLVFYTLKTENE---SRIGFSISKKVGNAVIRNKIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RL+E RL A + K G+D + I + A I + L N F+ V++
Sbjct: 58 RLREISRLNAYQI-KDGYDIICIVRVYAKDIDYNTLNNSFLHLVKKA 103
>gi|167038673|ref|YP_001666251.1| ribonuclease P [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167041023|ref|YP_001664008.1| ribonuclease P [Thermoanaerobacter sp. X514]
gi|300913766|ref|ZP_07131083.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307725548|ref|YP_003905299.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|320117065|ref|YP_004187224.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687617|sp|B0K5N8|RNPA_THEPX RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687686|sp|B0K8I3|RNPA_THEP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166855263|gb|ABY93672.1| ribonuclease P protein component [Thermoanaerobacter sp. X514]
gi|166857507|gb|ABY95915.1| ribonuclease P protein component [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300890451|gb|EFK85596.1| ribonuclease P protein component [Thermoanaerobacter sp. X561]
gi|307582609|gb|ADN56008.1| ribonuclease P protein component [Thermoanaerobacter sp. X513]
gi|319930156|gb|ADV80841.1| ribonuclease P protein component [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 116
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I +KK +F V F + N+ RVG++V+KK G +V RNR+R
Sbjct: 3 RKIVKIKKSYEFKKVYSNGKSVANQFVVMYYM-ENNLGFNRVGYSVSKKIGKSVVRNRVR 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R L E+ RL + +K G D + +A+ + F L N + + +
Sbjct: 62 RLLHESFRL-LDIEIKTGFDIIFVARGKIVEADFHTLKNSMRKLIMK 107
>gi|257070290|ref|YP_003156545.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
gi|256561108|gb|ACU86955.1| ribonuclease P protein component [Brachybacterium faecium DSM 4810]
Length = 122
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +F V +G + + + PRVGF V+KK G AV RNR+ RRL
Sbjct: 7 RLHTGDEFRAVTRGGVRSARSHVVVHLALLTQGDEAPRVGFVVSKKIGNAVVRNRVTRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
+E VR + G V+ A PF EL + + +R R
Sbjct: 67 REIVRPRLAAL-PPGAAIVVRALPGIDDQPFSELEHDVDSALAAAQRKLARRGKRVR 122
>gi|328952577|ref|YP_004369911.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
gi|328452901|gb|AEB08730.1| Ribonuclease P protein component [Desulfobacca acetoxidans DSM
11109]
Length = 125
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L KR +F VK+ G R+ P F + +N PR+G VTK+ G AV+RNR++
Sbjct: 14 KADRLLKRAEFQRVKQVGSRRRSPHFVI--SLADNDLQRPRLGVVVTKRLGKAVQRNRVK 71
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R L+E R + D V+IAK A + E+ +
Sbjct: 72 RLLREFFRRHKGILPPQ--DIVIIAKPGAPGLTSAEVAAELGPVL 114
>gi|147669565|ref|YP_001214383.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
gi|146270513|gb|ABQ17505.1| ribonuclease P protein component [Dehalococcoides sp. BAV1]
Length = 126
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V +G G ++ L NN RVGF V+KK G AVERNR
Sbjct: 7 MKQANRLTKREEYSQVLARGGTYIGSLAIMKTLPNNLEL--SRVGFIVSKKVGGAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 65 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 121
Query: 120 SRKS 123
S K+
Sbjct: 122 SFKT 125
>gi|60393731|sp|P0A167|RNPA_PSEPK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60393732|sp|P0A168|RNPA_PSEPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|581462|emb|CAA44415.1| unnamed protein product [Pseudomonas putida]
Length = 133
Score = 80.6 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L R F V K P +L +L N PR+G + KK AV+RNR+
Sbjct: 6 SREKRLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++++ RL + + G D V++A++ I EL HF + +R RS +
Sbjct: 66 KRLMRDSFRLNQQLLA--GLDIVIVARKGLGEIENPELHQHFGKLWKRLARSRPTP 119
>gi|302559668|ref|ZP_07312010.1| ribonuclease P [Streptomyces griseoflavus Tu4000]
gi|302477286|gb|EFL40379.1| ribonuclease P [Streptomyces griseoflavus Tu4000]
Length = 123
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQG 52
+ L++R F V++G + + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGNRHLVVHLRSGATDPHAPGESAPPSRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + + G V+ A A +L +RR
Sbjct: 62 GAVVRNKVKRRLRHLMRQRVDRL-PPGSLVVVRALPGAGDADHAQLARDLDAALRRL 117
>gi|148545142|ref|YP_001272512.1| ribonuclease P [Lactobacillus reuteri DSM 20016]
gi|184154474|ref|YP_001842815.1| ribonuclease P [Lactobacillus reuteri JCM 1112]
gi|227364305|ref|ZP_03848398.1| ribonuclease P [Lactobacillus reuteri MM2-3]
gi|325683504|ref|ZP_08163020.1| ribonuclease P protein component [Lactobacillus reuteri MM4-1A]
gi|166991078|sp|A5VMV1|RNPA_LACRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229470480|sp|B2GA53|RNPA_LACRJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148532176|gb|ABQ84175.1| ribonuclease P protein component [Lactobacillus reuteri DSM 20016]
gi|183225818|dbj|BAG26335.1| ribonuclease P [Lactobacillus reuteri JCM 1112]
gi|227070618|gb|EEI08948.1| ribonuclease P [Lactobacillus reuteri MM2-3]
gi|324977854|gb|EGC14805.1| ribonuclease P protein component [Lactobacillus reuteri MM4-1A]
Length = 117
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKESEFQRVFETHNSVANHKFVVYQMEKP-GQKHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++ + + + D+++IA+ A + E + V + R ++
Sbjct: 60 VKRRIRQTLLEVKPQL-RSDVDFLVIARSAADGLSMAETKKNLVHVLNRAHLLDEKSED 117
>gi|262281817|ref|ZP_06059586.1| ribonuclease P protein component [Streptococcus sp. 2_1_36FAA]
gi|262262271|gb|EEY80968.1| ribonuclease P protein component [Streptococcus sp. 2_1_36FAA]
Length = 119
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + + F + + RVG +V+KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFNAIFNDKQSVANKRFVIY--KLDKDQKHFRVGLSVSKKLGNAVVRNG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + D+V+IA++ + +KE+ + + ++ K
Sbjct: 59 IKRKIRHVLIEHRQEL--QPVDFVIIARKGVEELNYKEIERNLLHVLKLAK 107
>gi|227873166|ref|ZP_03991457.1| ribonuclease P [Oribacterium sinus F0268]
gi|227840997|gb|EEJ51336.1| ribonuclease P [Oribacterium sinus F0268]
Length = 115
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K +F K G+ +F + ++ N R+G + +KK G +V R+
Sbjct: 1 MKRFPSMKSNEEFQHCYKKGKSYANAYFVMLIVEN--GLDYSRLGISCSKKVGNSVVRHG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R+L+E RL E +K G D VL+ ++ F + EL +++ R+
Sbjct: 59 ISRKLREIFRLHKE--IKEGLDIVLVVRQKVAFASYSELEIAYLDLCSRHH 107
>gi|153956507|ref|YP_001397272.1| ribonuclease P [Clostridium kluyveri DSM 555]
gi|189043732|sp|A5N455|RNPA_CLOK5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146349365|gb|EDK35901.1| RnpA [Clostridium kluyveri DSM 555]
Length = 112
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V K G+ L V N + R+G +V+KK G +V RNR++
Sbjct: 2 DVYRIKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKNVN--RLGVSVSKKVGKSVVRNRIK 59
Query: 62 RRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL ++ + +++G+D V IA++ + + E+ N +++
Sbjct: 60 RLIKESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINNSVKNLIKKA 108
>gi|152986774|ref|YP_001351681.1| ribonuclease P [Pseudomonas aeruginosa PA7]
gi|166226732|sp|A6VF46|RNPA_PSEA7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150961932|gb|ABR83957.1| ribonuclease P protein component [Pseudomonas aeruginosa PA7]
Length = 135
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ R E + G D V+IA++ + EL F + +R R+ ++
Sbjct: 71 RESFRHNQEALA--GWDIVMIARKGLGELENPELHQQFGKLWKRLLRNRPRTES 122
>gi|322515971|ref|ZP_08068911.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
gi|322125570|gb|EFX96905.1| ribonuclease P protein component [Streptococcus vestibularis ATCC
49124]
Length = 111
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + G F + LN + RVG +V+K+ G AV RNR
Sbjct: 1 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYSLNRD--LPHFRVGLSVSKRLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ A+ + + D+V+IA++ + ++++ ++ V ++ K
Sbjct: 59 VKRRLRHALMDMSSQLEHQ--DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 107
>gi|258611657|ref|ZP_05711587.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
gi|258605136|gb|EEW17744.1| LOW QUALITY PROTEIN: ribonuclease P [Listeria monocytogenes FSL
R2-503]
Length = 109
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F V + G+ F + L + R+G +V+KK G AV RNR++R ++++
Sbjct: 2 DFQKVFRRGKSFANRQFVVYTLK-QEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHE 60
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+ +Y++IA++ A + F E+ + ++ + N
Sbjct: 61 LESQINPEN-EYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNN 107
>gi|220925222|ref|YP_002500524.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
gi|219949829|gb|ACL60221.1| ribonuclease P protein [Methylobacterium nodulans ORS 2060]
Length = 141
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAVERN 58
+ + +R + G + + + + R GFTVTK+ G A ERN
Sbjct: 8 VGRITRRPDYLAAAAGRRFHTGRLTAQGRLREAETAPDGSAGLRFGFTVTKRTGHATERN 67
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R+RRRLK AV D VLI +R+AL PF+ L + + + +GK
Sbjct: 68 RIRRRLKAAVAAIGTDSADQPLDVVLIGRREALSAPFEVLVDDIRRALAAVTKPKPAGKP 127
>gi|73663754|ref|YP_302535.1| ribonuclease P [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72496269|dbj|BAE19590.1| ribonuclease P protein component [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 115
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+KK F + K G+ F + N + R+G +V+KK G AV RNR++
Sbjct: 4 KAYRIKKNSDFQFIYKKGKSVANRQFVIYTQPN-KALNHFRLGISVSKKLGNAVVRNRIK 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R ++E ++ E +L D ++IA++ A + ++ ++ K
Sbjct: 63 RAIRENFKIHKEDILP--MDIIVIARQPAKDMDTLQIQASLEHVLKIAK 109
>gi|253681259|ref|ZP_04862057.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
gi|253562497|gb|EES91948.1| ribonuclease P protein component [Clostridium botulinum D str.
1873]
Length = 113
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K +F V + G+ L V NNN+ R+G +V+KK G +V R+R
Sbjct: 1 MKKHEKIRKNIEFRRVYRRGKSYSNGLLVLYVFKNNNNLDKSRIGISVSKKVGNSVVRSR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R + E+ RL V K G+D V +A+ ++ F E+ + + ++R
Sbjct: 61 VKRLISESYRLNNTNV-KIGYDLVFVARVNSKDKRFSEIESSLINLLKRA 109
>gi|227432920|ref|ZP_03914863.1| ribonuclease P protein component [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351321|gb|EEJ41604.1| ribonuclease P protein component [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 116
Score = 80.6 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K +F + ++ RVG +V+KK G A ER
Sbjct: 1 MRKTFRIKKPEEFQHVFNKHCSVANKYFIVYQMDKPEQKHF-RVGLSVSKKVGKAHERVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + D ++IA+ A K L N + ++ K
Sbjct: 60 VKRRIRQSLLELKPEL-PQELDLLVIARPAAAHRSQKFLKNQMIHVLKLAK 109
>gi|188587645|ref|YP_001922720.1| ribonuclease P [Clostridium botulinum E3 str. Alaska E43]
gi|251781116|ref|ZP_04824036.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|238689656|sp|B2V1V3|RNPA_CLOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188497926|gb|ACD51062.1| ribonuclease P protein component [Clostridium botulinum E3 str.
Alaska E43]
gi|243085431|gb|EES51321.1| ribonuclease P protein component [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 125
Score = 80.6 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVER 57
I LKK +F +V + G+ L VL N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNIEFIIVYRRGKSFANKTLVLYVLKNKRNKDKDGIAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++ +R L E+ RL +LK G+D V +A+ + E +++
Sbjct: 62 SKCKRLLSESFRLNYNNILK-GYDCVFVARNPMRDSDYFETEKAMKNLIKKA 112
>gi|219856810|ref|YP_002473932.1| hypothetical protein CKR_3467 [Clostridium kluyveri NBRC 12016]
gi|219570534|dbj|BAH08518.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 126
Score = 80.6 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V K G+ L V N + R+G +V+KK G +V RNR++
Sbjct: 16 DVYRIKKNAEFRAVYKRGKSFSNNLLVLYVYMNRKNVN--RLGVSVSKKVGKSVVRNRIK 73
Query: 62 RRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL ++ + +++G+D V IA++ + + E+ N +++
Sbjct: 74 RLIKESFRLNSDYMKVENGYDLVFIARKASNGKSYVEINNSVKNLIKKA 122
>gi|227533509|ref|ZP_03963558.1| ribonuclease P protein component (RNaseP protein) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227188838|gb|EEI68905.1| ribonuclease P protein component (RNaseP protein) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 174
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 57 LRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 114
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + + + +R
Sbjct: 115 QIKRYIRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 162
>gi|312869219|ref|ZP_07729391.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
gi|311095240|gb|EFQ53512.1| ribonuclease P protein component [Lactobacillus oris PB013-T2-3]
Length = 118
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFIIYQMAKP-GQKHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++++ + + D+++IA+ A + E + V ++R +
Sbjct: 60 VKRRIRQSLLEVKPQL-RSDVDFLVIARPAADGLEMAETKKNLVHALKRANLFKEKSEE 117
>gi|225869760|ref|YP_002745707.1| ribonuclease P protein component [Streptococcus equi subsp. equi
4047]
gi|254808088|sp|C0M7E1|RNPA_STRE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|225699164|emb|CAW92390.1| ribonuclease P protein component [Streptococcus equi subsp. equi
4047]
Length = 119
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + R G +V KK G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFKLGQSMANRKFVIYHLK--GEHKHFRAGISVGKKLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+++ + + + D+V+IA+R A + ++ + + + + + G
Sbjct: 59 VKRKIRHVLMELGDHLKSE--DFVVIARRGAEELDYQAVKQNLHHVL-KLAKLLEEGFEI 115
Query: 120 SRKS 123
+KS
Sbjct: 116 EKKS 119
>gi|56461739|ref|YP_157020.1| RNase P protein component [Idiomarina loihiensis L2TR]
gi|67461324|sp|Q5QZK1|RNPA_IDILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56180749|gb|AAV83471.1| RNase P protein component [Idiomarina loihiensis L2TR]
Length = 125
Score = 80.2 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L F V K + +L N PR+G TV+KK+ AV+RNR++R++
Sbjct: 12 RLLTPSHFQTVFSNPPVKAVTAHVTMLATPNELGHPRIGVTVSKKRAKRAVDRNRIKRQI 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+E RL + D V+IAK+ + L + R+ + ++ S
Sbjct: 72 RETFRLRQHKI--PAFDIVIIAKQGIVEQDNAALRDTLNYLWRKLAKRCEQYQSRS 125
>gi|15672110|ref|NP_266284.1| ribonuclease P [Lactococcus lactis subsp. lactis Il1403]
gi|281490608|ref|YP_003352588.1| ribonuclease P [Lactococcus lactis subsp. lactis KF147]
gi|13878722|sp|Q9CJ73|RNPA_LACLA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12722976|gb|AAK04226.1|AE006251_2 ribonuclease P protein component [Lactococcus lactis subsp. lactis
Il1403]
gi|281374414|gb|ADA63943.1| Ribonuclease P, protein component [Lactococcus lactis subsp. lactis
KF147]
Length = 117
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+K+ + F + + F + N + RVG +V+KK G AV RNR+
Sbjct: 4 KKTYRVKRSKDFDQIFSAKHSFANKKFVVY--KLNTNQPHFRVGLSVSKKLGHAVLRNRI 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ A+ + D+V+IA+ + F+E+ + ++ +K
Sbjct: 62 KRLLRHAIAEFKPYLTDE--DFVIIARSGVETLSFEEVKKNLKHVLKLSK 109
>gi|258406261|ref|YP_003199003.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
gi|257798488|gb|ACV69425.1| ribonuclease P protein component [Desulfohalobium retbaense DSM
5692]
Length = 130
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+KR Q+ +G F + VL R+G V+KK G AVERNR++R L
Sbjct: 11 RLRKRPQYLACYQRGRRYFLKRFIVYVLPRGKDGAGCRLGTAVSKKTGNAVERNRVKRLL 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+E RL + D V++AKR + + + + + ++R +R ++
Sbjct: 71 REFFRLHHQSWCL-DCDIVVVAKRSIVPGELTLQLVTDELTPLIKRLEREDTPARSTP 127
>gi|73748804|ref|YP_308043.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|289432825|ref|YP_003462698.1| ribonuclease P protein component [Dehalococcoides sp. GT]
gi|123619804|sp|Q3ZY16|RNPA_DEHSC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|73660520|emb|CAI83127.1| ribonuclease P protein component [Dehalococcoides sp. CBDB1]
gi|288946545|gb|ADC74242.1| ribonuclease P protein component [Dehalococcoides sp. GT]
Length = 120
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V +G GP ++ L NN RVGF V+KK G AVERNR
Sbjct: 1 MKQANRLTKREEYSQVLARGGTYIGPLAIMKTLPNNLEL--SRVGFIVSKKVGGAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 59 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 115
Query: 120 SRKS 123
S K+
Sbjct: 116 SFKT 119
>gi|224418477|ref|ZP_03656483.1| ribonuclease P protein component [Helicobacter canadensis MIT
98-5491]
gi|253827791|ref|ZP_04870676.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313142008|ref|ZP_07804201.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511197|gb|EES89856.1| ribonuclease P [Helicobacter canadensis MIT 98-5491]
gi|313131039|gb|EFR48656.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 108
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK ++ F +V K + P+F L N R+GF V+KK G AV RN ++R
Sbjct: 1 MITLKSKKDFDIVYKSPKKWHNPYFILFFKEN---LKSSRIGFCVSKKVGNAVCRNFVKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RL+ R ++ D VL+AK P+ L + + + R K
Sbjct: 58 RLRNLYRNSMSNLISG--DMVLLAKSGLDKAPYSTLQSSYNHALMRLK 103
>gi|163868924|ref|YP_001610151.1| ribonuclease P [Bartonella tribocorum CIP 105476]
gi|161018598|emb|CAK02156.1| ribonuclease P protein component [Bartonella tribocorum CIP 105476]
Length = 130
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LEV + + RVGFTVT+K G
Sbjct: 1 MKKKHPCRIRKRADFLAVRTGEKRRGPLFLLEVKSREQTAEKKSSLVARVGFTVTRKNGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AV+RNR++RRL+EAVR+ ++ G DYV++A RDAL PF L + R++ +
Sbjct: 61 AVKRNRIKRRLREAVRVGITNHMEAGTDYVIVAYRDALHAPFTSLISELNRRIKPKTKHQ 120
Query: 114 YSGKN 118
+
Sbjct: 121 QRQQG 125
>gi|326405711|gb|ADZ62782.1| ribonuclease P protein component [Lactococcus lactis subsp. lactis
CV56]
Length = 117
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+K+ + F + + F + N + RVG +V+KK G AV RNR+
Sbjct: 4 KKTYRVKRSKDFDQIFSAQHSFANKKFVVY--KLNTNQPHFRVGLSVSKKLGHAVLRNRI 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ A+ + D+V+IA+ + F+E+ + ++ +K
Sbjct: 62 KRLLRHAIAEFKPYLTDE--DFVIIARSGVETLSFEEVKKNLKHVLKLSK 109
>gi|23193193|gb|AAN14422.1|AF319579_3 RNase P [Bacillus weihenstephanensis]
Length = 105
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K F V KG+ F + L+ R+G +V+KK G AV RNR
Sbjct: 1 MKKKNRIIKNDSFQAVFQKGQSNANRQFVVYKLDKEK-QPHFRIGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R +++++ + + G D+V+IA++ + ++EL +
Sbjct: 60 IKRMIRQSIIELKDEID-SGKDFVIIARKPCAEMTYEELKKSLIHVF 105
>gi|330833640|ref|YP_004402465.1| ribonuclease P [Streptococcus suis ST3]
gi|329307863|gb|AEB82279.1| ribonuclease P [Streptococcus suis ST3]
Length = 119
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ R F + KG F + L RVG +V+KK G AV RN+
Sbjct: 1 MKKSYCVKRERDFNDIFTKGNNVANRRFVVYRL--PKEQKHFRVGLSVSKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 59 IKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 107
>gi|300812004|ref|ZP_07092460.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497030|gb|EFK32096.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 121
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEQDFQTVFENGESVANRAFVIYVLPRKQNKHF-RVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYARDFDWEKTRENLLHALNLAHVIEEMPNK 118
Query: 119 FSR 121
+
Sbjct: 119 EEK 121
>gi|227518111|ref|ZP_03948160.1| ribonuclease P [Enterococcus faecalis TX0104]
gi|227555682|ref|ZP_03985729.1| ribonuclease P [Enterococcus faecalis HH22]
gi|229547132|ref|ZP_04435857.1| ribonuclease P [Enterococcus faecalis TX1322]
gi|229550702|ref|ZP_04439427.1| ribonuclease P [Enterococcus faecalis ATCC 29200]
gi|293382665|ref|ZP_06628593.1| ribonuclease P protein component [Enterococcus faecalis R712]
gi|293387923|ref|ZP_06632459.1| ribonuclease P protein component [Enterococcus faecalis S613]
gi|307268913|ref|ZP_07550277.1| ribonuclease P protein component [Enterococcus faecalis TX4248]
gi|307274009|ref|ZP_07555219.1| ribonuclease P protein component [Enterococcus faecalis TX0855]
gi|307276502|ref|ZP_07557622.1| ribonuclease P protein component [Enterococcus faecalis TX2134]
gi|307284056|ref|ZP_07564226.1| ribonuclease P protein component [Enterococcus faecalis TX0860]
gi|307287185|ref|ZP_07567256.1| ribonuclease P protein component [Enterococcus faecalis TX0109]
gi|307296587|ref|ZP_07576407.1| ribonuclease P protein component [Enterococcus faecalis TX0411]
gi|312903104|ref|ZP_07762285.1| ribonuclease P protein component [Enterococcus faecalis TX0635]
gi|312908817|ref|ZP_07767756.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 512]
gi|312951723|ref|ZP_07770617.1| ribonuclease P protein component [Enterococcus faecalis TX0102]
gi|312979541|ref|ZP_07791223.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 516]
gi|227074445|gb|EEI12408.1| ribonuclease P [Enterococcus faecalis TX0104]
gi|227175192|gb|EEI56164.1| ribonuclease P [Enterococcus faecalis HH22]
gi|229304135|gb|EEN70131.1| ribonuclease P [Enterococcus faecalis ATCC 29200]
gi|229307714|gb|EEN73701.1| ribonuclease P [Enterococcus faecalis TX1322]
gi|291079971|gb|EFE17335.1| ribonuclease P protein component [Enterococcus faecalis R712]
gi|291082660|gb|EFE19623.1| ribonuclease P protein component [Enterococcus faecalis S613]
gi|306495923|gb|EFM65511.1| ribonuclease P protein component [Enterococcus faecalis TX0411]
gi|306501783|gb|EFM71074.1| ribonuclease P protein component [Enterococcus faecalis TX0109]
gi|306503427|gb|EFM72676.1| ribonuclease P protein component [Enterococcus faecalis TX0860]
gi|306506829|gb|EFM75979.1| ribonuclease P protein component [Enterococcus faecalis TX2134]
gi|306509317|gb|EFM78377.1| ribonuclease P protein component [Enterococcus faecalis TX0855]
gi|306514721|gb|EFM83272.1| ribonuclease P protein component [Enterococcus faecalis TX4248]
gi|310625255|gb|EFQ08538.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 512]
gi|310630296|gb|EFQ13579.1| ribonuclease P protein component [Enterococcus faecalis TX0102]
gi|310633495|gb|EFQ16778.1| ribonuclease P protein component [Enterococcus faecalis TX0635]
gi|311287723|gb|EFQ66279.1| ribonuclease P protein component [Enterococcus faecalis DAPTO 516]
gi|315026680|gb|EFT38612.1| ribonuclease P protein component [Enterococcus faecalis TX2137]
gi|315030125|gb|EFT42057.1| ribonuclease P protein component [Enterococcus faecalis TX4000]
gi|315033560|gb|EFT45492.1| ribonuclease P protein component [Enterococcus faecalis TX0017]
gi|315036383|gb|EFT48315.1| ribonuclease P protein component [Enterococcus faecalis TX0027]
gi|315143598|gb|EFT87614.1| ribonuclease P protein component [Enterococcus faecalis TX2141]
gi|315148264|gb|EFT92280.1| ribonuclease P protein component [Enterococcus faecalis TX4244]
gi|315151288|gb|EFT95304.1| ribonuclease P protein component [Enterococcus faecalis TX0012]
gi|315153714|gb|EFT97730.1| ribonuclease P protein component [Enterococcus faecalis TX0031]
gi|315155126|gb|EFT99142.1| ribonuclease P protein component [Enterococcus faecalis TX0043]
gi|315158744|gb|EFU02761.1| ribonuclease P protein component [Enterococcus faecalis TX0312]
gi|315163328|gb|EFU07345.1| ribonuclease P protein component [Enterococcus faecalis TX0645]
gi|315165731|gb|EFU09748.1| ribonuclease P protein component [Enterococcus faecalis TX1302]
gi|315168217|gb|EFU12234.1| ribonuclease P protein component [Enterococcus faecalis TX1341]
gi|315170516|gb|EFU14533.1| ribonuclease P protein component [Enterococcus faecalis TX1342]
gi|315174185|gb|EFU18202.1| ribonuclease P protein component [Enterococcus faecalis TX1346]
gi|315573994|gb|EFU86185.1| ribonuclease P protein component [Enterococcus faecalis TX0309B]
gi|315578836|gb|EFU91027.1| ribonuclease P protein component [Enterococcus faecalis TX0630]
gi|315581945|gb|EFU94136.1| ribonuclease P protein component [Enterococcus faecalis TX0309A]
gi|327536430|gb|AEA95264.1| ribonuclease P [Enterococcus faecalis OG1RF]
gi|329576313|gb|EGG57828.1| ribonuclease P protein component [Enterococcus faecalis TX1467]
Length = 120
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V + F + VL RVG +V KK G AV RN
Sbjct: 3 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKP-QQAHFRVGISVGKKIGNAVTRNA 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 62 VKRKIRASLFQLKDRISPE-IDFIVIARPGLEKLSSEEVKANLTHVLNLAK 111
>gi|269958146|ref|YP_003327935.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
gi|269306827|gb|ACZ32377.1| ribonuclease P protein component [Xylanimonas cellulosilytica DSM
15894]
Length = 125
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + L++ +F V++G + +L +N + P+VGF V+K G +V+RN
Sbjct: 2 LPSTHRLRRPAEFGRTVRRGTRAGRTTVVVHLLVDNEGDAAPQVGFVVSKAVGNSVQRNL 61
Query: 60 MRRRLKEAVRLCAEG----VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+E VR V V+ A A F EL + + + +
Sbjct: 62 VKRRLREIVRPLVATSGLAVFPEHSRAVVRALPAASTATFAELSRDVQAGLDKAVQRAAA 121
Query: 116 GKN 118
+
Sbjct: 122 ARP 124
>gi|270308303|ref|YP_003330361.1| RNase P protein component [Dehalococcoides sp. VS]
gi|270154195|gb|ACZ62033.1| RNase P protein component [Dehalococcoides sp. VS]
Length = 126
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR +++ V G G ++ L NN RVGF V+KK G AVERNR
Sbjct: 7 MKYSNRLTKREEYSRVLAGDGTYIGQLAVMKALPNNLE--FSRVGFIVSKKVGGAVERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R A L+ G D V IA+ A + E+ + + + + +
Sbjct: 65 AKRILRESLRTIA---LRQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKTDEKT 121
Query: 120 SRKS 123
S K+
Sbjct: 122 SFKT 125
>gi|194467401|ref|ZP_03073388.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
gi|194454437|gb|EDX43334.1| ribonuclease P protein component [Lactobacillus reuteri 100-23]
Length = 117
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKKESEFQRVFETHNSVANHKFVVYQMEKP-GQKHFRVGISVGKKIGNAVHRNW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RR+++ + + + D+++IA+ A + E + V ++R ++
Sbjct: 60 VKRRIRQTLLEVKPQL-RSDVDFLVIARSAADGLSMAETKKNLVHVLKRAHLLDEKSED 117
>gi|319946178|ref|ZP_08020418.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
gi|319747560|gb|EFV99813.1| ribonuclease P protein component [Streptococcus australis ATCC
700641]
Length = 113
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G F + L RVG +V+KK G AV RNR
Sbjct: 1 MRKSYRVKREKDFNAIFKSGMNCANRKFVIYRL--PQEQPHFRVGLSVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R ++ + + ++ D+V+IA++ + F ++ + V ++
Sbjct: 59 IKRLIRHVLMKHQDHLVAD--DFVVIARKGVEELDFDQVEKNLVHVLK 104
>gi|300780160|ref|ZP_07090016.1| ribonuclease P [Corynebacterium genitalium ATCC 33030]
gi|300534270|gb|EFK55329.1| ribonuclease P [Corynebacterium genitalium ATCC 33030]
Length = 122
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNS--NLLPRVGFTVTKKQGCAVER 57
+ L F V +KG + + PR G V+K+ G AV R
Sbjct: 2 LPRAHKLASSADFRTVMRKGGRAGTRTVVVHYYTRTDPVITGGPRFGLVVSKQVGNAVTR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ + RRL+ + + + D V+ A A K+L + + R + G+
Sbjct: 62 HSVSRRLRHVLAGFISELPRE-VDIVVRALPPAAEATSKQLLDDVSSALPRAHKKSKRGR 120
>gi|150019911|ref|YP_001312165.1| ribonuclease P [Clostridium beijerinckii NCIMB 8052]
gi|189043731|sp|A6M3M9|RNPA_CLOB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|149906376|gb|ABR37209.1| ribonuclease P protein component [Clostridium beijerinckii NCIMB
8052]
Length = 125
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVER 57
I LKK +F +V K G+ + +L N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNFEFTIVYKRGKSFANELLVMYILKNRRNKDRDFLAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +R + E+ RL ++K G+D+V IA+ + E+ +++
Sbjct: 62 SRCKRLITESFRLNYNYIVK-GYDFVFIARNPLQSKSYFEVERAMRSLIKKA 112
>gi|295398137|ref|ZP_06808186.1| ribonuclease P protein component [Aerococcus viridans ATCC 11563]
gi|294973656|gb|EFG49434.1| ribonuclease P protein component [Aerococcus viridans ATCC 11563]
Length = 125
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V G F + L + R+G +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFGQVFHHGHSTANRQFVIYRLEKD--QPHFRIGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R++++++ G+ D+++IA++ A + E+ + + K
Sbjct: 59 VKRKIRQSITELKAGIDPSN-DFIVIARKPAADMTTAEVKKSLIHVLSLAK 108
>gi|223043335|ref|ZP_03613381.1| ribonuclease P protein component [Staphylococcus capitis SK14]
gi|222443124|gb|EEE49223.1| ribonuclease P protein component [Staphylococcus capitis SK14]
Length = 115
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + NN+ N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTY-NNSENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D V+IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKEDIIAK--DIVVIARHPARDMTTLEIQGSLEHVLKIAK 108
>gi|116510956|ref|YP_808172.1| ribonuclease P [Lactococcus lactis subsp. cremoris SK11]
gi|125623021|ref|YP_001031504.1| ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|123125967|sp|Q032X2|RNPA_LACLS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226721|sp|A2RHL3|RNPA_LACLM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116106610|gb|ABJ71750.1| ribonuclease P protein component [Lactococcus lactis subsp.
cremoris SK11]
gi|124491829|emb|CAL96749.1| Ribonuclease P [Lactococcus lactis subsp. cremoris MG1363]
gi|300069768|gb|ADJ59168.1| ribonuclease P [Lactococcus lactis subsp. cremoris NZ9000]
Length = 117
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+K+ + F + + F + N + RVG +V+KK G AV RNR+
Sbjct: 4 KKTYRVKRSKDFDQIFSAKHSFANKRFVVY--KLNTNQPHFRVGLSVSKKLGHAVLRNRI 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ AV ++ D+V+IA+ + F+E+ + ++ +K
Sbjct: 62 KRLLRHAVAEFKPYLVDE--DFVIIARSGVETLSFEEVKKNLRHVLKLSK 109
>gi|157151601|ref|YP_001449499.1| ribonuclease P [Streptococcus gordonii str. Challis substr. CH1]
gi|189043750|sp|A8AUN9|RNPA_STRGC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157076395|gb|ABV11078.1| ribonuclease P protein component [Streptococcus gordonii str.
Challis substr. CH1]
Length = 119
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + + F + + RVG +V+KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFNAIFNDKQSVANKRFVIY--KLDKDQKHFRVGLSVSKKLGNAVVRNG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + D+V+IA++ + +KE + + ++ K
Sbjct: 59 IKRKIRHVLIEHRQEL--QAVDFVIIARKGVEELDYKETERNLLHVLKLAK 107
>gi|121602433|ref|YP_989322.1| ribonuclease P [Bartonella bacilliformis KC583]
gi|120614610|gb|ABM45211.1| ribonuclease P protein component [Bartonella bacilliformis KC583]
Length = 121
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-----RVGFTVTKKQGCAVERNR 59
C ++KR F V+KGE R+GP F LE+ + + R+GFTVT+K G AV+RNR
Sbjct: 7 CRIRKRADFLAVRKGEKRRGPLFLLEMRSRQKTAGTSSPLAARIGFTVTRKNGNAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++RRL+EAVR+ K G DYV++A D L+ PF L + R++ +++
Sbjct: 67 IKRRLREAVRVGLTNDTKAGVDYVIVAYPDVLYAPFTSLISELSRRMKSKEKNQK 121
>gi|104784449|ref|YP_610947.1| ribonuclease P [Pseudomonas entomophila L48]
gi|122401166|sp|Q1I2H2|RNPA_PSEE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|95113436|emb|CAK18164.1| ribonuclease P protein component [Pseudomonas entomophila L48]
Length = 133
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L R F V K P +L +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTPRHFKAVFDSPTGKVPGKNLLILARENGLDHPRLGLVIGKKSVKLAVQRNRLKRLM 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+++ RL + + G D V++A++ + EL HF + +R RS S
Sbjct: 71 RDSFRLNQQMLA--GLDIVIVARKGLGEVENPELHQHFGKLWKRLVRSRPSP 120
>gi|300857415|ref|YP_003782399.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
gi|300437530|gb|ADK17297.1| ribonuclease P protein component [Clostridium ljungdahlii DSM
13528]
Length = 111
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +KK +F V + G+ L + N R+G +V+KK G +V RNR++
Sbjct: 2 DVYRIKKNAEFRAVYRRGKSFSNNLLVLYIYRNKKGIN--RLGISVSKKVGKSVIRNRIK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE RL E + K G+D V IA+ + + E+ N +++
Sbjct: 60 RLIKENFRLNIEDI-KVGYDLVFIARNLSNGKSYIEIENSMKNLIKKA 106
>gi|257878644|ref|ZP_05658297.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257881310|ref|ZP_05660963.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257885585|ref|ZP_05665238.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257890527|ref|ZP_05670180.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257893102|ref|ZP_05672755.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|258615272|ref|ZP_05713042.1| ribonuclease P [Enterococcus faecium DO]
gi|260558225|ref|ZP_05830421.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|261206915|ref|ZP_05921604.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289566508|ref|ZP_06446932.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|293553545|ref|ZP_06674172.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|293563249|ref|ZP_06677701.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|293569161|ref|ZP_06680467.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|294616661|ref|ZP_06696432.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|294619743|ref|ZP_06699148.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|294623757|ref|ZP_06702585.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|314940133|ref|ZP_07847313.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|314943036|ref|ZP_07849840.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|314948154|ref|ZP_07851550.1| ribonuclease P protein component [Enterococcus faecium TX0082]
gi|314953432|ref|ZP_07856350.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|314993829|ref|ZP_07859165.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|314998146|ref|ZP_07863028.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|257812872|gb|EEV41630.1| ribonuclease P [Enterococcus faecium 1,230,933]
gi|257816968|gb|EEV44296.1| ribonuclease P [Enterococcus faecium 1,231,502]
gi|257821441|gb|EEV48571.1| ribonuclease P [Enterococcus faecium 1,231,501]
gi|257826887|gb|EEV53513.1| ribonuclease P [Enterococcus faecium 1,231,410]
gi|257829481|gb|EEV56088.1| ribonuclease P [Enterococcus faecium 1,231,408]
gi|260075399|gb|EEW63705.1| ribonuclease P protein component [Enterococcus faecium C68]
gi|260078543|gb|EEW66245.1| ribonuclease P protein component [Enterococcus faecium TC 6]
gi|289161717|gb|EFD09593.1| ribonuclease P [Enterococcus faecium D344SRF]
gi|291588130|gb|EFF19972.1| ribonuclease P protein component [Enterococcus faecium E1071]
gi|291590481|gb|EFF22219.1| ribonuclease P protein component [Enterococcus faecium E1636]
gi|291594013|gb|EFF25482.1| ribonuclease P protein component [Enterococcus faecium E1679]
gi|291596711|gb|EFF27934.1| ribonuclease P protein component [Enterococcus faecium U0317]
gi|291602300|gb|EFF32525.1| ribonuclease P protein component [Enterococcus faecium E1039]
gi|291604788|gb|EFF34270.1| ribonuclease P protein component [Enterococcus faecium E1162]
gi|313587858|gb|EFR66703.1| ribonuclease P protein component [Enterococcus faecium TX0133a01]
gi|313591720|gb|EFR70565.1| ribonuclease P protein component [Enterococcus faecium TX0133B]
gi|313594535|gb|EFR73380.1| ribonuclease P protein component [Enterococcus faecium TX0133A]
gi|313598236|gb|EFR77081.1| ribonuclease P protein component [Enterococcus faecium TX0133C]
gi|313640638|gb|EFS05218.1| ribonuclease P protein component [Enterococcus faecium TX0133a04]
gi|313645408|gb|EFS09988.1| ribonuclease P protein component [Enterococcus faecium TX0082]
Length = 118
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKEREFQAVFHTGDSFANRKFVVYRLEKP-GQPHFRVGLSVGKKVGNAVNRNE 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+++ AV E + D+++IA+ + + E+ ++ V ++ K K+
Sbjct: 60 VKRKIRAAVYSIKEEIDPE-LDFIVIARPSVKGLTYDEVRSNLVHVLKLAKIIDREEKSK 118
>gi|297588062|ref|ZP_06946706.1| ribonuclease P [Finegoldia magna ATCC 53516]
gi|297574751|gb|EFH93471.1| ribonuclease P [Finegoldia magna ATCC 53516]
Length = 113
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R++ +V K G+ FSL V NS R+GF+VTKK G AVERNR
Sbjct: 1 MDKSVRLRDNREYNVVYKRGKTYYNRNFSLVVY---NSKKGTRIGFSVTKKYGNAVERNR 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L+E VRL K G D V+I K++ + +K+L + + R+
Sbjct: 58 IKRKLREIVRLNFSEFDK-GLDMVIIPKKNTEDLTYKQLESALLHVCRKASNKK 110
>gi|327383981|gb|AEA55457.1| Ribonuclease P protein component [Lactobacillus casei LC2W]
gi|327387165|gb|AEA58639.1| Ribonuclease P protein component [Lactobacillus casei BD-II]
Length = 183
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 66 LRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 123
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + + + +R
Sbjct: 124 QIKRYIRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 171
>gi|307243393|ref|ZP_07525550.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
gi|306493203|gb|EFM65199.1| ribonuclease P protein component [Peptostreptococcus stomatis DSM
17678]
Length = 125
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK F V +G+ + + N + R+G +++KK G A ERNR+RR +K
Sbjct: 9 IKKDSDFRKVYQRGKSLADRNLVIYTMKNKSDK--SRIGISISKKVGKAHERNRIRRCIK 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
EA RL + + G+D V IA+ +A ++EL ++ GK K
Sbjct: 67 EAYRLNIDDKVLGGYDLVFIARINAADKDYRELERSLKYICKKANIIKKDGKKQVSK 123
>gi|182416752|ref|ZP_02948149.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237669612|ref|ZP_04529590.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182379409|gb|EDT76904.1| ribonuclease P protein component [Clostridium butyricum 5521]
gi|237654846|gb|EEP52408.1| ribonuclease P protein component [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 125
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVER 57
I LKK +F V + G+ + +L N +NL ++G +V+KK G +V R
Sbjct: 2 IYRLKKNFEFKFVYRRGKSFANELLVMYILKNKRNKDKENNLYNKLGVSVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +R + E+ RL +LK G+D++ IA+ + + ++ + +++
Sbjct: 62 SRSKRLISESFRLNCNYILK-GYDFIFIARNPIVDKNYFDVEKSMINLIKKA 112
>gi|310816964|ref|YP_003964928.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
gi|308755699|gb|ADO43628.1| ribonuclease P protein component [Ketogulonicigenium vulgare Y25]
Length = 142
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKKQGCAVERNR 59
S + I+ +RR F L + + F L+ RVGFT +KK G AV R
Sbjct: 21 SGLAIITQRRDFLLAARAFRQGTTGFHLQARKREAGEDIAGIRVGFTCSKKVGNAVARGH 80
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNK 110
+RRL+E R G DYVL+ + F+++ V R
Sbjct: 81 AKRRLREVARAVLPVAGLEGWDYVLVGRNGTTASADFEQMKVDLARAVARLH 132
>gi|187934705|ref|YP_001887737.1| ribonuclease P [Clostridium botulinum B str. Eklund 17B]
gi|238691668|sp|B2TRI3|RNPA_CLOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|187722858|gb|ACD24079.1| ribonuclease P protein component [Clostridium botulinum B str.
Eklund 17B]
Length = 125
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVER 57
I LKK +F +V + G+ L VL N + +VG +V+KK G +V R
Sbjct: 2 IYRLKKNIEFIIVYRRGKSFANKTLVLYVLKNKRNKDKDGIAYSKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++ +R L E+ RL +LK G+D V +A+ + E +++
Sbjct: 62 SKCKRLLSESFRLNYNNILK-GYDCVFVARNPIRDSNYFETEKAMKNLIKKA 112
>gi|323465555|gb|ADX77708.1| ribonuclease P protein component [Staphylococcus pseudintermedius
ED99]
Length = 115
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F L+ KG+ F + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNVDFQLIYRKGKSVANRQFVVYTYETQTLTHF-RLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E +L D ++IA+ A + E+ ++ K
Sbjct: 60 IKRSIRECFKVHKEDILPK--DIIVIARFPAKTMSTAEIQKSLEHVLKIAK 108
>gi|289422480|ref|ZP_06424323.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
gi|289157052|gb|EFD05674.1| ribonuclease P protein component [Peptostreptococcus anaerobius
653-L]
Length = 117
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +F + + G+ + + N R+G +++KK G A RN++RR +K
Sbjct: 13 IKKDPEFRRIYRSGKSMADRNLVVYKMKNKKEK--SRIGISISKKVGKAHVRNKLRRYIK 70
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
EA RL + +K G+DY+ IA+ ++ + ++ ++ K
Sbjct: 71 EAYRLNIDPYVKGGYDYIFIARVNSSDASYHDIEKSIKYLAKKAK 115
>gi|116619135|ref|YP_819506.1| RNase P protein component [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122270665|sp|Q03UI9|RNPA_LEUMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116097982|gb|ABJ63133.1| RNase P protein component [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 116
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V K +F + ++ RVG +V+KK G A ER
Sbjct: 1 MRKTFRIKKPEEFQHVFNKHRSVANKYFIVYQMDKPEQKHF-RVGLSVSKKVGKAHERVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + D ++IA+ A K L N + ++ K
Sbjct: 60 VKRRIRQSLLELKPEL-PQELDLLVIARPAAAHRSQKFLKNQMIHVLKLAK 109
>gi|168187279|ref|ZP_02621914.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
gi|169294814|gb|EDS76947.1| ribonuclease P protein component [Clostridium botulinum C str.
Eklund]
Length = 112
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ++K +F V + + + NN+ RVG +V+KK G +V R+R+
Sbjct: 1 MKKNERIRKNVEFRRVYRRGKSYSNSLLVLYIFKNNNIDTSRVGISVSKKVGNSVVRSRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + E+ RL + K +D V +A+ + +KE+ + ++R
Sbjct: 61 KRLISESYRLNCNNL-KEKYDLVFVARNKSKDKTYKEIESSVTNLLKRA 108
>gi|308071642|ref|YP_003873247.1| ribonuclease P [Paenibacillus polymyxa E681]
gi|305860921|gb|ADM72709.1| Ribonuclease P protein component (RNaseP protein) [Paenibacillus
polymyxa E681]
Length = 116
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V + G+ F + RVG + +KK G AV RNR
Sbjct: 1 MQKKLRLRNRADFGRVYRHGKSFANHQFVVYWFRRREVEQF-RVGISASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
MRR +KE VR +++ D + I ++ A+ + ++EL + +R+ S +
Sbjct: 60 MRRIVKEIVRHHEHELVEQ-IDLIFIVRKGAVTMSYQELEKSVLHVLRKASLLKSSRR 116
>gi|199598236|ref|ZP_03211657.1| RNase P protein component [Lactobacillus rhamnosus HN001]
gi|258509937|ref|YP_003172688.1| ribonuclease P [Lactobacillus rhamnosus GG]
gi|199590839|gb|EDY98924.1| RNase P protein component [Lactobacillus rhamnosus HN001]
gi|257149864|emb|CAR88837.1| Ribonuclease P protein component [Lactobacillus rhamnosus GG]
gi|259651197|dbj|BAI43359.1| ribonuclease P [Lactobacillus rhamnosus GG]
Length = 118
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEVEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + E + + +R
Sbjct: 59 QIKRYIRQSLLELKPEIDPQ-TDFLVIARKSANQLDMAETKKNLIHVMR 106
>gi|239828711|ref|YP_002951335.1| ribonuclease P [Geobacillus sp. WCH70]
gi|259494109|sp|C5D9Z1|RNPA_GEOSW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|239809004|gb|ACS26069.1| ribonuclease P protein component [Geobacillus sp. WCH70]
Length = 116
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 12 QFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V +G F + +L+ R+G +V+KK G AV RNR++R +++
Sbjct: 12 EFQEVFQRGTSMANRQFVIYMLDRPE-QPYFRIGLSVSKKLGKAVVRNRIKRYIRQVFLE 70
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+ ++ DYV+IA+ + + E+ + +R+
Sbjct: 71 MKDDIMPQK-DYVIIARLPVAEMTYFEVKKSLLHVLRKAGALKR 113
>gi|226947219|ref|YP_002802292.1| ribonuclease P [Azotobacter vinelandii DJ]
gi|259494099|sp|C1DNF9|RNPA_AZOVD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226722146|gb|ACO81317.1| Bacterial ribonuclease P protein [Azotobacter vinelandii DJ]
Length = 130
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMR 61
L RQF V K P + +L N+ PR+G + KK RNR++
Sbjct: 8 REKRLLIPRQFKAVFDSPTAKVPGKHVLLLARPNALDHPRLGLVIGKKSVKLSVGRNRLK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
R ++E+ RL + + G D V++A++ + E+ F + +R RS
Sbjct: 68 RLIRESFRLNQDSLA--GWDIVVVARKGLGELENTEVTQQFGKLWKRLARSRPQ 119
>gi|242372604|ref|ZP_04818178.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
gi|242349659|gb|EES41260.1| ribonuclease P [Staphylococcus epidermidis M23864:W1]
Length = 115
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + NN+ N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTY-NNSENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKDDIIAR--DIIVIARQPAKDMTTLEIQGSLEHVLKIAK 108
>gi|197120419|ref|YP_002140846.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
gi|226736869|sp|B5EGY0|RNPA_GEOBB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|197089779|gb|ACH41050.1| ribonuclease P protein component [Geobacter bemidjiensis Bem]
Length = 116
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R +F +G +F + L N RVGFTV+KK G AV RN +
Sbjct: 7 PKAERLLRRPEFLQFNEGASKLHTQYFLV--LLKPNEGTGTRVGFTVSKKVGNAVVRNSI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RRL+E R + D ++AK+ A + F ++ R ++
Sbjct: 65 KRRLREFYRQNKSLFI--SADINIVAKKGADVLDFHQISTELAAAFGRLRKK 114
>gi|330685253|gb|EGG96914.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU121]
Length = 115
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + +N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQKIYKSGKSVANRQFVVYTYDNKEQEHF-RLGISVSKKLGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKQDIITK--DIIVIARQPAKKMSTLEIQGSLEHVLKIAK 108
>gi|72163515|ref|YP_291172.1| ribonuclease P protein [Thermobifida fusca YX]
gi|123628489|sp|Q47K73|RNPA_THEFY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71917247|gb|AAZ57149.1| ribonuclease P protein [Thermobifida fusca YX]
Length = 147
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQGCAVER 57
+++R F + R G L + + PRVGF+V+K G AV R
Sbjct: 6 NRMRRRADFDTALRHGRRAGRNALSVALFVPQDTPDQPGGDAPPRVGFSVSKAVGKAVVR 65
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
R++RRL+ +R + G V+ AK A + + EL +R R
Sbjct: 66 KRVQRRLRHLMRERVGSL-PAGSLLVVRAKPQAALLDYSELAAQLDSALRAVTRPRGQSS 124
Query: 118 NFSRKS 123
+ +R S
Sbjct: 125 HRTRAS 130
>gi|261410108|ref|YP_003246349.1| ribonuclease P [Paenibacillus sp. Y412MC10]
gi|329925023|ref|ZP_08279967.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
gi|261286571|gb|ACX68542.1| ribonuclease P protein component [Paenibacillus sp. Y412MC10]
gi|328940142|gb|EGG36474.1| ribonuclease P protein component [Paenibacillus sp. HGF5]
Length = 116
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ R F+ V + + + RVG + +KK G AV RNRM
Sbjct: 1 MHRKLRLRNRADFSRVYRHGKSFANHQFVVYWSRKKEVEQFRVGVSCSKKIGNAVVRNRM 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RR +KE VR ++ D + I ++ AL ++EL + +R++
Sbjct: 61 RRLVKEIVRHHQHQII-EHIDLIFIVRKGALDKSYQELEKSVLHVLRKSSLLKAKR 115
>gi|313124786|ref|YP_004035045.1| ribonuclease p protein component [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312281349|gb|ADQ62068.1| Ribonuclease P protein component [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685109|gb|EGD27240.1| ribonuclease P protein component [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 121
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V GE F + VL+ + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEQDFQTVFENGESVANRAFVIYVLHRKQNKHF-RVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++IA+ A +++ + + +
Sbjct: 60 RLKRYIRAVLTENRDRIA-PDLDFLVIARPYARDFDWEKTRENLLHALNLAHVIEEMPNK 118
Query: 119 FSR 121
+
Sbjct: 119 EEK 121
>gi|29377773|ref|NP_816927.1| ribonuclease P [Enterococcus faecalis V583]
gi|255971547|ref|ZP_05422133.1| ribonuclease P protein component [Enterococcus faecalis T1]
gi|255974520|ref|ZP_05425106.1| ribonuclease P protein component [Enterococcus faecalis T2]
gi|256618529|ref|ZP_05475375.1| ribonuclease P protein component [Enterococcus faecalis ATCC 4200]
gi|256761852|ref|ZP_05502432.1| ribonuclease P protein component [Enterococcus faecalis T3]
gi|256854979|ref|ZP_05560340.1| ribonuclease P protein component [Enterococcus faecalis T8]
gi|256957017|ref|ZP_05561188.1| ribonuclease P protein component [Enterococcus faecalis DS5]
gi|256960827|ref|ZP_05564998.1| ribonuclease P protein component [Enterococcus faecalis Merz96]
gi|256963981|ref|ZP_05568152.1| ribonuclease P protein component [Enterococcus faecalis HIP11704]
gi|257078695|ref|ZP_05573056.1| ribonuclease P protein component [Enterococcus faecalis JH1]
gi|257081345|ref|ZP_05575706.1| ribonuclease P protein component [Enterococcus faecalis E1Sol]
gi|257084002|ref|ZP_05578363.1| ribonuclease P protein component [Enterococcus faecalis Fly1]
gi|257087832|ref|ZP_05582193.1| ribonuclease P protein component [Enterococcus faecalis D6]
gi|257088484|ref|ZP_05582845.1| ribonuclease P [Enterococcus faecalis CH188]
gi|257417423|ref|ZP_05594417.1| ribonuclease P protein component [Enterococcus faecalis AR01/DG]
gi|257418844|ref|ZP_05595838.1| ribonuclease P [Enterococcus faecalis T11]
gi|257421341|ref|ZP_05598331.1| ribonuclease P [Enterococcus faecalis X98]
gi|294781246|ref|ZP_06746593.1| ribonuclease P protein component [Enterococcus faecalis PC1.1]
gi|300862024|ref|ZP_07108104.1| ribonuclease P protein component [Enterococcus faecalis TUSoD Ef11]
gi|48474385|sp|Q82YV0|RNPA_ENTFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29345241|gb|AAO82997.1| ribonuclease P protein component [Enterococcus faecalis V583]
gi|255962565|gb|EET95041.1| ribonuclease P protein component [Enterococcus faecalis T1]
gi|255967392|gb|EET98014.1| ribonuclease P protein component [Enterococcus faecalis T2]
gi|256598056|gb|EEU17232.1| ribonuclease P protein component [Enterococcus faecalis ATCC 4200]
gi|256683103|gb|EEU22798.1| ribonuclease P protein component [Enterococcus faecalis T3]
gi|256709492|gb|EEU24539.1| ribonuclease P protein component [Enterococcus faecalis T8]
gi|256947513|gb|EEU64145.1| ribonuclease P protein component [Enterococcus faecalis DS5]
gi|256951323|gb|EEU67955.1| ribonuclease P protein component [Enterococcus faecalis Merz96]
gi|256954477|gb|EEU71109.1| ribonuclease P protein component [Enterococcus faecalis HIP11704]
gi|256986725|gb|EEU74027.1| ribonuclease P protein component [Enterococcus faecalis JH1]
gi|256989375|gb|EEU76677.1| ribonuclease P protein component [Enterococcus faecalis E1Sol]
gi|256992032|gb|EEU79334.1| ribonuclease P protein component [Enterococcus faecalis Fly1]
gi|256995862|gb|EEU83164.1| ribonuclease P protein component [Enterococcus faecalis D6]
gi|256997296|gb|EEU83816.1| ribonuclease P [Enterococcus faecalis CH188]
gi|257159251|gb|EEU89211.1| ribonuclease P protein component [Enterococcus faecalis ARO1/DG]
gi|257160672|gb|EEU90632.1| ribonuclease P [Enterococcus faecalis T11]
gi|257163165|gb|EEU93125.1| ribonuclease P [Enterococcus faecalis X98]
gi|294451709|gb|EFG20164.1| ribonuclease P protein component [Enterococcus faecalis PC1.1]
gi|295112339|emb|CBL30976.1| ribonuclease P protein component, eubacterial [Enterococcus sp.
7L76]
gi|300848549|gb|EFK76306.1| ribonuclease P protein component [Enterococcus faecalis TUSoD Ef11]
gi|323479238|gb|ADX78677.1| ribonuclease P protein component [Enterococcus faecalis 62]
Length = 118
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++F V + F + VL RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKP-QQAHFRVGISVGKKIGNAVTRNA 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + + D+++IA+ + +E+ + + K
Sbjct: 60 VKRKIRASLFQLKDRISPE-IDFIVIARPGLEKLSSEEVKANLTHVLNLAK 109
>gi|319898442|ref|YP_004158535.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
gi|319402406|emb|CBI75947.1| ribonuclease P protein component [Bartonella clarridgeiae 73]
Length = 124
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 1 MSNIC--ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGC 53
M ++KR F V+ GE R+GP F LE+ + RVGFTVT+K G
Sbjct: 1 MKQKHPCRIRKRVDFLAVRTGEKRRGPLFLLEIKPREKTAETKYPLVARVGFTVTRKHGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV+RNR++RRL+EAVR+ ++ G DYV++A RD L PF L + R++
Sbjct: 61 AVQRNRIKRRLREAVRVGLVNEMEAGTDYVIVAHRDVLHAPFTFLISELSRRIK 114
>gi|56808046|ref|ZP_00365845.1| COG0594: RNase P protein component [Streptococcus pyogenes M49 591]
Length = 102
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + LN + RVG +V KK G AV RN
Sbjct: 1 MKKTYRVKREKDFQAIFKDGKSTANRKFVIYHLNRGQDH--FRVGISVGKKIGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
++R+++ + + D+V+IA++ + ++EL +
Sbjct: 59 VKRKIRHVIMALGHQLKSE--DFVVIARKGVESLEYQELQQNLHHV 102
>gi|314934962|ref|ZP_07842321.1| ribonuclease P protein component [Staphylococcus caprae C87]
gi|313652892|gb|EFS16655.1| ribonuclease P protein component [Staphylococcus caprae C87]
Length = 115
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + NN N R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQTIYKKGKSVANRQFVVYTY-NNKENKHFRLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D V+IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKEDIIAK--DIVVIARHPARDMTTLEIQGSLEHVLKIAK 108
>gi|227550638|ref|ZP_03980687.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257888097|ref|ZP_05667750.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257896285|ref|ZP_05675938.1| ribonuclease P [Enterococcus faecium Com12]
gi|257899269|ref|ZP_05678922.1| ribonuclease P [Enterococcus faecium Com15]
gi|293379366|ref|ZP_06625510.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
gi|293572716|ref|ZP_06683680.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|227180239|gb|EEI61211.1| ribonuclease P [Enterococcus faecium TX1330]
gi|257824151|gb|EEV51083.1| ribonuclease P [Enterococcus faecium 1,141,733]
gi|257832850|gb|EEV59271.1| ribonuclease P [Enterococcus faecium Com12]
gi|257837181|gb|EEV62255.1| ribonuclease P [Enterococcus faecium Com15]
gi|291607208|gb|EFF36566.1| ribonuclease P protein component [Enterococcus faecium E980]
gi|292641889|gb|EFF60055.1| ribonuclease P protein component [Enterococcus faecium PC4.1]
Length = 118
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK R+F V G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKEREFQAVFHTGDSFANRKFVVYRLKKP-GQPHFRVGLSVGKKVGNAVSRNE 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+++ AV E + D+++IA+ + + E+ ++ V ++ K K+
Sbjct: 60 VKRKIRAAVYSIKEEIDPE-LDFIVIARPSVKGLTYDEVRSNLVHVLKLAKIIDREEKSK 118
>gi|330718060|ref|ZP_08312660.1| ribonuclease P [Leuconostoc fallax KCTC 3537]
Length = 115
Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K +F + L+ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPEEFQMVFNKHHSVANKYFIVYQLHKP-GQKHFRLGLSVSKKIGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ ++ + D ++IA+ + V ++
Sbjct: 60 VKRRIRQSLLELKP-LIPNELDLLVIARPAIAHQDQHFVKQQIVHVLK 106
>gi|255527588|ref|ZP_05394452.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296186786|ref|ZP_06855187.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|255508721|gb|EET85097.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
gi|296048500|gb|EFG87933.1| ribonuclease P protein component [Clostridium carboxidivorans P7]
Length = 110
Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++K +F + + G+ L N R+G +V+KK G +V RNR++
Sbjct: 2 KNQKVRKNSEFRFIYRRGKSFSNHLLVLYFYKNKKDVN--RIGISVSKKVGKSVTRNRVK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +KE+ RL +L G+D V IA+ A + E+ + ++R
Sbjct: 60 RLIKESYRLNNSELLT-GYDLVFIARSAASEKSYNEISDAIKNLLKRA 106
>gi|152990626|ref|YP_001356348.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
gi|166226729|sp|A6Q3D2|RNPA_NITSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151422487|dbj|BAF69991.1| ribonuclease P protein component [Nitratiruptor sp. SB155-2]
Length = 109
Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK +R+F V K G P+F L + + + R+GF +KK G AV+RNR
Sbjct: 1 MKGVQTLKTKREFDYVYKRGIAFHSPYFVLFYIPDKD----MRIGFVASKKVGKAVQRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R LK + + YV +AK L FK + + + R KR
Sbjct: 57 AKRVLKALFIQYFDQLPIG--RYVFVAKPKLLGADFKRIDQEMTKILERIKRRK 108
>gi|251800248|ref|YP_003014979.1| ribonuclease P [Paenibacillus sp. JDR-2]
gi|247547874|gb|ACT04893.1| ribonuclease P protein component [Paenibacillus sp. JDR-2]
Length = 117
Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F + + G+ F + + R+G + +KK G AV RNR
Sbjct: 1 MQRKLRLRNRADFNRIYRYGKSFANGQFVVYW-SRQPVAEPFRLGVSASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
MRR +KE VRL E ++ D++LI ++ A+ + K+L +++
Sbjct: 60 MRRVIKEIVRLNGEKIV-PNTDFILIVRKPAVEMESKQLEKSIFHVLKKA 108
>gi|167629169|ref|YP_001679668.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
gi|167591909|gb|ABZ83657.1| ribonuclease p protein component [Heliobacterium modesticaldum
Ice1]
Length = 118
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVER 57
++ L++ F V K G+ G + L L ++ R GF+V+ K G A R
Sbjct: 2 LARHYRLRRNEDFQKVYKRGKSYGGQYVVLYRLQPRLPDIPSCRRFGFSVSSKVGKANVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
NR++R L+E R G D +LIA+ IPF+++ ++ +R K
Sbjct: 62 NRVKRMLREICRRH-GLRADDGSDIILIARSKIKGIPFRQVEQDVIKLFKRAK 113
>gi|308175812|ref|YP_003922517.1| protein component of ribonuclease P [Bacillus amyloliquefaciens DSM
7]
gi|307608676|emb|CBI45047.1| protein component of ribonuclease P (RNase P) (substrate
specificity) [Bacillus amyloliquefaciens DSM 7]
gi|328555788|gb|AEB26280.1| ribonuclease P [Bacillus amyloliquefaciens TA208]
gi|328914177|gb|AEB65773.1| protein component of ribonuclease P (RNase P) [Bacillus
amyloliquefaciens LL3]
Length = 116
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V K G F L L+ RVG +V+KK G AV RNR
Sbjct: 1 MKKRNRLKKNEDFQKVFKRGTSMANRQFVLYTLDQPQQKE-LRVGLSVSKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R +++A++ E + D+++IA++ A + +E R+
Sbjct: 60 VKRLIRQAIQEEKELLKPK--DFIIIARKPAAELSIEETKKSLQHLFRK 106
>gi|299135921|ref|ZP_07029105.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
gi|298602045|gb|EFI58199.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX8]
Length = 173
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEV-----LNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L+K + +V K ++ + PR+G TV K G AV+RNR
Sbjct: 47 HRLRKHADYQIVYKAARKQFGKQIAYFHAPRPAERRSDTPGPRIGLTVPKALGKAVDRNR 106
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+EAVR + D +L KR + F L R + +
Sbjct: 107 IKRRLREAVRHALPLLTAP-VDVILHPKRSVIDADFAVLEREVSVIFRSVQAAAERASAK 165
>gi|296134498|ref|YP_003641745.1| ribonuclease P protein component [Thermincola sp. JR]
gi|296033076|gb|ADG83844.1| ribonuclease P protein component [Thermincola potens JR]
Length = 117
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +KK +F V G+ + L L N RVGF+++KK G AV RNR+RR
Sbjct: 3 LDKIKKSSEFRKVYVSGKSVSNRYLVLYYLKN--GQPNSRVGFSISKKVGKAVVRNRIRR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALF-IPFKELCNHFVERVRRNKRSYYSGKNF 119
L E RL + G D ++I + + + + L F+ ++++ S N
Sbjct: 61 LLTEITRLSWHKIS-EGWDIIIIVRPRFVEKLCYTSLERAFINLIKKSGLSKEEVGNK 117
>gi|163791582|ref|ZP_02185984.1| ribonuclease P [Carnobacterium sp. AT7]
gi|159873160|gb|EDP67262.1| ribonuclease P [Carnobacterium sp. AT7]
Length = 112
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + VL+ N+ RVG +V KK G AV RN
Sbjct: 1 MRKTYRVKKEAEFQKVFHHGKSTANRQFVIYVLDKNDQLHF-RVGISVGKKIGNAVMRNN 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + K D+++IA++ + KE ++ K
Sbjct: 60 VKRRIRQSLTELKPQL-KAEKDFIVIARKPIADMTMKETKKSLTHVLKLAK 109
>gi|332522749|ref|ZP_08399001.1| ribonuclease P protein component [Streptococcus porcinus str.
Jelinkova 176]
gi|332314013|gb|EGJ26998.1| ribonuclease P protein component [Streptococcus porcinus str.
Jelinkova 176]
Length = 119
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L + RVG +V+K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFGGGKSTANRKFVIHFLEKKQDH--FRVGISVSKRLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + + D+V+IA+R + ++ L + ++ K
Sbjct: 59 IKRKIRHILMEFKDHLKED--DFVVIARRGVEELDYQALRQNLKHVLKLAK 107
>gi|332709874|ref|ZP_08429830.1| ribonuclease P [Lyngbya majuscula 3L]
gi|332351245|gb|EGJ30829.1| ribonuclease P [Lyngbya majuscula 3L]
Length = 135
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNN-----------------NNSNLLPR 42
+ LK R F V + G R G + +L L ++ R
Sbjct: 3 LPQANRLKHWRDFKTVYRWGIRRSGRYLTLRGLQQSTIAPIAKETIAPEKSLPDNPPPSR 62
Query: 43 VGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G +++ K AV RNR++R+++ A+R + G V I K +A + +L
Sbjct: 63 LGISISQKVSKKAVVRNRIKRQIRSALRQLLPRLS-PGWKLVFIVKPEARECEYAQLLRE 121
Query: 102 FVERVRRNK 110
+ + + +
Sbjct: 122 LEKLLVKAE 130
>gi|315640359|ref|ZP_07895475.1| ribonuclease P protein component [Enterococcus italicus DSM 15952]
gi|315483895|gb|EFU74375.1| ribonuclease P protein component [Enterococcus italicus DSM 15952]
Length = 112
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F V + + F + VL RVG +V KK G AV RN
Sbjct: 1 MRKAYRVKKELDFQRVYQTKNSYANRKFIVYVLAKPEQKHF-RVGISVGKKVGNAVHRNA 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ +++ ++ D+++IA+ + +E+ ++
Sbjct: 60 VKRKIRASIQAMQAEIVAQQ-DFIVIARPGVSDLSSQEVYSNLKHVFA 106
>gi|239630801|ref|ZP_04673832.1| RNase P protein [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239527084|gb|EEQ66085.1| RNase P protein [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 118
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R ++++++ + D+++IA++ A + + + +R
Sbjct: 59 QIKRYIRQSLQELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 106
>gi|269836197|ref|YP_003318425.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
gi|269785460|gb|ACZ37603.1| ribonuclease P protein component [Sphaerobacter thermophilus DSM
20745]
Length = 129
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L++ +F V+K G P + VL N+ + R GF V ++ G A RNR+
Sbjct: 3 ARALRLRRPFEFERVRKQGRSWATPLVVMAVLPNDLEHN--RYGFAVGRRIGKATARNRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++EAVR L+ G+D V IA+ + + ++ + R K +
Sbjct: 61 KRWMREAVR-HLHPRLRQGYDIVFIARGAVASPDVTYHQVFDAIATLTARAKLQTAAPAP 119
>gi|239637284|ref|ZP_04678271.1| ribonuclease P protein component [Staphylococcus warneri L37603]
gi|239597121|gb|EEQ79631.1| ribonuclease P protein component [Staphylococcus warneri L37603]
Length = 115
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + +N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQKIYKRGKSVANRQFVVYTYDNKEQEHF-RLGISVSKKLGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKQDIITK--DIIVIARQPAKSMSTLEIQGSLEHVLKIAK 108
>gi|150021504|ref|YP_001306858.1| ribonuclease P protein component [Thermosipho melanesiensis BI429]
gi|149794025|gb|ABR31473.1| ribonuclease P protein component [Thermosipho melanesiensis BI429]
Length = 131
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK R+ F + + G+ + P+F + L N R GF+V KK G AV RNR+
Sbjct: 12 KKYERLKLRKDFKRLYETGKSIQVPYFVIIYLKNGFE--YSRFGFSVRKKFGKAVRRNRL 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRN 109
+R ++E +R + V+ G+DY++IA++ D I ++ ++ R
Sbjct: 70 KRWMREVIRTN-KYVIPKGYDYLIIARKHLSRDFEKITYQHFKEELLKLFARI 121
>gi|313889852|ref|ZP_07823494.1| ribonuclease P protein component [Streptococcus pseudoporcinus SPIN
20026]
gi|313121897|gb|EFR44994.1| ribonuclease P protein component [Streptococcus pseudoporcinus SPIN
20026]
Length = 119
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + G + F + L + RVG +V+K+ G AV RN
Sbjct: 1 MKKSYRVKREKDFQAIFGGGKSTANRKFVIHFLEKKQDH--FRVGISVSKRLGNAVTRNA 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ + + + + D+V++A+R + ++ L + ++ K
Sbjct: 59 IKRKIRHILMEFKDYLKED--DFVVVARRGVEELDYQALRQNLKHVLKLAK 107
>gi|222152200|ref|YP_002561360.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
gi|254808070|sp|B9E8Z6|RNPA_MACCJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222121329|dbj|BAH18664.1| ribonuclease P protein component [Macrococcus caseolyticus
JCSC5402]
Length = 115
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + N+ + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNEDFQKIYKNGKSVANRQFIIYRQKNSENEHF-RLGISVSKKIGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E+ E ++K D+++IA++ + + E+ ++ K
Sbjct: 60 IKRAIRESFTKHKEDIIKD--DFIVIARQPSKEMTTNEINKSLEHVMKIAK 108
>gi|294085070|ref|YP_003551830.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664645|gb|ADE39746.1| ribonuclease P protein component [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 117
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS+ I+ R F + GE ++ + + ++ R G T TKK G AV RNR
Sbjct: 1 MSDKHIITSRPGFIRARNHGEKAISKGVIIQAVRRDGAD--WRYGLTATKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++RRL+ + + G DYVLI + F EL + +R R +
Sbjct: 59 VKRRLRVIAKQVLAPIAMSGVDYVLIGRATTATSSFDELVTEVKKSLRYLHRKLGEAEK 117
>gi|256848508|ref|ZP_05553950.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
gi|256714775|gb|EEU29754.1| ribonuclease P [Lactobacillus coleohominis 101-4-CHN]
Length = 119
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V + F + + RVG +V KK G AV RN
Sbjct: 6 MRKSFRVKKENEFQRVFETHNSVANHKFVIYQMEKP-GQPHFRVGISVGKKIGNAVHRNW 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++RR+++ + + K D+++IA+ A + E + V ++R
Sbjct: 65 LKRRIRQTLLEVKPQL-KSEVDFLVIARPAADGMTMAETKKNLVHALKRA 113
>gi|225386356|ref|ZP_03756120.1| hypothetical protein CLOSTASPAR_00100 [Clostridium asparagiforme
DSM 15981]
gi|225047538|gb|EEG57784.1| hypothetical protein CLOSTASPAR_00100 [Clostridium asparagiforme
DSM 15981]
Length = 114
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + +G + V+ N + R+G +V+KK G +V R+
Sbjct: 1 MKRFPSVKKNGEFQKIYRGGTSHANRLLVMYVMKNGEESN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL + + + G + V++A+ A +K L + ++
Sbjct: 59 ITRLLREIFRLNEDRI-QTGLNIVVVARVAARDSDYKHLESAYLHL 103
>gi|309390349|gb|ADO78229.1| ribonuclease P protein component [Halanaerobium praevalens DSM
2228]
Length = 109
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F V G+ + L R G +V+K+ G AV RN+++R
Sbjct: 1 MESLKKNKEFKKVYENGKSYATRNLVIYCLKYKKGKKN-RYGLSVSKRVGNAVVRNKLKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RL+E +R + G++ + IA+ + + + L +++
Sbjct: 60 RLREIIREFEKNEDFKGYEIIFIARNPVVQLNYHRLKKDVNRLLKKM 106
>gi|296110739|ref|YP_003621120.1| ribonuclease P [Leuconostoc kimchii IMSNU 11154]
gi|295832270|gb|ADG40151.1| ribonuclease P [Leuconostoc kimchii IMSNU 11154]
Length = 115
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K +F + L+ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPTEFQIVFNKHRSVANKYFIIYQLDKPEQKHF-RLGISVSKKIGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RR+++++ + D ++IA+ K + + ++
Sbjct: 60 VKRRIRQSMLELKPQI-PQEIDVLVIARPAVAKQSQKFIKEQMIHVLKLAH 109
>gi|113478083|ref|YP_724144.1| ribonuclease P [Trichodesmium erythraeum IMS101]
gi|110169131|gb|ABG53671.1| ribonuclease P protein component [Trichodesmium erythraeum IMS101]
Length = 159
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNS------------NLLPRVGFTV 47
+ + L+ + F+ V KG + SL L + + R+G ++
Sbjct: 26 LPDESRLRHHKDFSAVYQKGIRKNTSHLSLRALRHMQQPQLIEHSDQLYPDRPTRIGISI 85
Query: 48 TKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+KK AV RNR++R+++ A+R + K G D V++ K A + E + +
Sbjct: 86 SKKVNKGAVVRNRIKRQIRAALRQMLPYISK-GWDLVIVVKPTAKQCNYYEFLQQLEKLL 144
Query: 107 R 107
Sbjct: 145 A 145
>gi|284052521|ref|ZP_06382731.1| ribonuclease P [Arthrospira platensis str. Paraca]
Length = 129
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVTKKQGC 53
+ + L+ + F V +G RK +L L + + R G ++++K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEIDAGDPPSRFGISISQKVSK 61
Query: 54 -AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRELLPKIS-PGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|302877175|ref|YP_003845808.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
gi|307687874|ref|ZP_07630320.1| ribonuclease P [Clostridium cellulovorans 743B]
gi|302580032|gb|ADL54044.1| ribonuclease P protein component [Clostridium cellulovorans 743B]
Length = 128
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAVER 57
++K +F V K G+ L + N + S R+G +V+KK G +V R
Sbjct: 2 KKEKIRKNIEFRTVYKRGKSFSNYLLVLYIFKNKKNYDESGAYNRIGISVSKKVGKSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R++R + E+ RL K+GHD+V+IA+ A + ++ + +
Sbjct: 62 SRVKRLINESYRLNKHK-FKYGHDFVVIARNPAHDKGYNDIEKALINLFIKA 112
>gi|322386703|ref|ZP_08060328.1| ribonuclease P protein component [Streptococcus cristatus ATCC
51100]
gi|321269376|gb|EFX52311.1| ribonuclease P protein component [Streptococcus cristatus ATCC
51100]
Length = 119
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F + K G+ F + L RVG +V+KK G AV RN
Sbjct: 1 MRKNYRVKSEKDFKAIFKAGQNFANRKFVVYKLEK--EQRHFRVGISVSKKLGNAVVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ + + K D+V+IA++ + + ++ + + ++
Sbjct: 59 IKRKIRHVLIQHRADLTKD--DFVVIARKGVETLDYHQVEQNLLHVLK 104
>gi|282881773|ref|ZP_06290431.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
gi|281298383|gb|EFA90821.1| ribonuclease P protein component [Peptoniphilus lacrimalis 315-B]
Length = 112
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V K + + NN + R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYKAKKISSCRYITLFTKKNN-LNIARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
RRR K R + K G+DYV +AK+DA+ FK+L F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKDAVDCDFKDLKKDFLNVLKRQRKVKN 112
>gi|293374953|ref|ZP_06621249.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325844330|ref|ZP_08168106.1| ribonuclease P protein component [Turicibacter sp. HGF1]
gi|292646430|gb|EFF64444.1| ribonuclease P protein component [Turicibacter sanguinis PC909]
gi|325489197|gb|EGC91579.1| ribonuclease P protein component [Turicibacter sp. HGF1]
Length = 113
Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + V K G + P+F + ++ R+ +V KK G AVERN+
Sbjct: 1 MQKNYRIKKSSEIEQVMKNGRSKANPYFIVYKYKKTDNENF-RIAISVGKKIGNAVERNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R ++ + + +DY +IA++ + + + ++
Sbjct: 60 VKRYIRNVTTEHKQTID-SNYDYFVIARKGVKELDYVSFKEKLEQLYKKM 108
>gi|167770832|ref|ZP_02442885.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
gi|167666872|gb|EDS11002.1| hypothetical protein ANACOL_02185 [Anaerotruncus colihominis DSM
17241]
Length = 111
Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ I L ++F +G P + L N + R+G T TKK G AV+RNR
Sbjct: 1 MAKIQTLTLNKEFKRAYYRGRSFATPVLVVYALKNRSGEN--RLGLTATKKVGKAVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR ++EA L + + G+D+VL+A+ F+ +++ +
Sbjct: 59 ARRVMREAFYLIEQELA-QGYDFVLVARVRTAFVSMQQVLEALRRACEKL 107
>gi|322421978|ref|YP_004201201.1| ribonuclease P protein component [Geobacter sp. M18]
gi|320128365|gb|ADW15925.1| ribonuclease P protein component [Geobacter sp. M18]
Length = 117
Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L++R +F G P F L L RVGFTV+KK G AV RN +
Sbjct: 7 PKAERLRRRPEFLQFNDGASKMHTPHFLL--LWKIKDGCATRVGFTVSKKVGNAVVRNSI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RRL+E R + D+ ++AK+ A + F ++ R ++
Sbjct: 65 KRRLREFYRQNKSLFI--SADFNIVAKKGADLLDFHQISTELAAAFGRLRKK 114
>gi|170018057|ref|YP_001728976.1| ribonuclease P protein component [Leuconostoc citreum KM20]
gi|238688942|sp|B1MWS3|RNPA_LEUCK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169804914|gb|ACA83532.1| Ribonuclease P protein component [Leuconostoc citreum KM20]
Length = 116
Score = 77.5 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F +V K + +F + ++ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPADFQIVFNKHQSVANKYFIVYHIDKPEQKHF-RLGLSVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ + H D ++IA+ K + + ++
Sbjct: 60 VKRRIRQSILELKSDL-PHDIDLLVIARPAVAKQSQKFIKEQIIHVLK 106
>gi|158425678|ref|YP_001526970.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
gi|158332567|dbj|BAF90052.1| ribonuclease P protein component [Azorhizobium caulinodans ORS 571]
Length = 136
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ + L+KRR F + E P F L+ + + PR+GFTVTKK G AV RNRM
Sbjct: 5 LAVVDRLRKRRDFLAAARAERANVPSFLLQGRDR-HDEAEPRLGFTVTKKNGNAVVRNRM 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RRRL+EA RL + + G DYVL+A+ L PF+ L V R + + S
Sbjct: 64 RRRLREAARLVMPQLGRSGFDYVLVARGPCLDAPFQTLVRDMERAVSRLHAAKKAKTPTS 123
Query: 121 R 121
+
Sbjct: 124 K 124
>gi|237738567|ref|ZP_04569048.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
gi|229424050|gb|EEO39097.1| ribonuclease P protein component [Fusobacterium sp. 2_1_31]
Length = 111
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + K G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF--NKNKLDYSRFGFVASKKIGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFI----PFKELCNHFVERVRRNK 110
+E +RL E + +D +++AK+ A + ++++ + +K
Sbjct: 59 LFREYIRLNIEKL-NANYDIIIVAKKKAGEMIETIKYQDIEKDLNRVFKNSK 109
>gi|209527901|ref|ZP_03276389.1| ribonuclease P protein component [Arthrospira maxima CS-328]
gi|209491656|gb|EDZ92023.1| ribonuclease P protein component [Arthrospira maxima CS-328]
Length = 129
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVT-KKQG 52
+ + L+ + F V +G RK +L L + R G +++ K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEMDAGVPASRFGISISQKVSK 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRQLLPTIS-PGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|168698919|ref|ZP_02731196.1| ribonuclease P protein component [Gemmata obscuriglobus UQM 2246]
Length = 163
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 9/122 (7%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+K +F + + N PR+G +V++K G AV RNR +
Sbjct: 7 PQTHHMKTPAEFERCYTRKRSAADGLLVVY-ACENGLAHPRLGCSVSRKVGNAVMRNRYK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE---LCNHFVERVRRNKRSYYSGKN 118
R +EA RL + G D +LI + P+ E L V++ R R G
Sbjct: 66 RLFREAFRLSQHDL-PQGVDLILIPRPG----PYPELGALRASLVKQARYAARKLSEGPR 120
Query: 119 FS 120
+
Sbjct: 121 SN 122
>gi|296875719|ref|ZP_06899784.1| ribonuclease P [Streptococcus parasanguinis ATCC 15912]
gi|312867497|ref|ZP_07727705.1| ribonuclease P protein component [Streptococcus parasanguinis
F0405]
gi|322390330|ref|ZP_08063858.1| ribonuclease P protein component [Streptococcus parasanguinis ATCC
903]
gi|296433289|gb|EFH19071.1| ribonuclease P [Streptococcus parasanguinis ATCC 15912]
gi|311096903|gb|EFQ55139.1| ribonuclease P protein component [Streptococcus parasanguinis
F0405]
gi|321142978|gb|EFX38428.1| ribonuclease P protein component [Streptococcus parasanguinis ATCC
903]
Length = 113
Score = 77.5 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + K G+ F + L + RVG +V+KK G AV RNR
Sbjct: 1 MKKSYRVKRDKDFNAIFKSGQNVANRKFVVYRLRKD--QPHFRVGLSVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++ + + D+V+IA++ + F ++ + V ++
Sbjct: 59 IKRLIRHVLIKHQAFLTTD--DFVVIARKGVEELDFHQVEKNLVHVLKLAH 107
>gi|258541101|ref|YP_003175600.1| ribonuclease P [Lactobacillus rhamnosus Lc 705]
gi|257152777|emb|CAR91749.1| Ribonuclease P protein component [Lactobacillus rhamnosus Lc 705]
Length = 118
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEVEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++ +++++ + D+++IA++ A + E + + +R
Sbjct: 59 QIKHYIRQSLLELKPEIDPQ-TDFLVIARKSANQLDMAETKKNLIHVMR 106
>gi|282601448|ref|ZP_06258054.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
gi|282569119|gb|EFB74654.1| ribonuclease P protein component [Subdoligranulum variabile DSM
15176]
Length = 143
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L K Q+ V +G+ P L V N R+G T TKK G AV+RNR RR +
Sbjct: 21 TLNKNWQYNRVYGRGKSYVHPHVVLYVAKNR--LGYTRIGLTATKKVGHAVQRNRCRRVM 78
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ A+ + G+D +L+A+ + +L + +
Sbjct: 79 RAALSEHLSQNI-GGYDIILVARGQTPHLKSTQLSKTLGKLFAKA 122
>gi|325291451|ref|YP_004267632.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
gi|324966852|gb|ADY57631.1| Ribonuclease P protein component [Syntrophobotulus glycolicus DSM
8271]
Length = 126
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ LKK F G + ++ GF +KK G +V+RNR
Sbjct: 17 LKKGLRLKKSGDFQRTFAAGRSYTSRQAVIYLVK-----GDTCFGFIASKKVGNSVKRNR 71
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++EAVRL + K G+ VLIA+RD + + E+ + +R+
Sbjct: 72 AKRLMREAVRLNLSRI-KPGYQVVLIARRDIIRATYAEVEKSVLFMLRKA 120
>gi|116491816|ref|YP_811360.1| RNase P protein component [Oenococcus oeni PSU-1]
gi|118587492|ref|ZP_01544917.1| ribonuclease P, protein component [Oenococcus oeni ATCC BAA-1163]
gi|290891477|ref|ZP_06554536.1| hypothetical protein AWRIB429_1926 [Oenococcus oeni AWRIB429]
gi|122276002|sp|Q04CX7|RNPA_OENOB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116092541|gb|ABJ57695.1| RNase P protein component [Oenococcus oeni PSU-1]
gi|118432142|gb|EAV38883.1| ribonuclease P, protein component [Oenococcus oeni ATCC BAA-1163]
gi|290478919|gb|EFD87584.1| hypothetical protein AWRIB429_1926 [Oenococcus oeni AWRIB429]
Length = 122
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLE--VLNNNNSNLLPRVGFTVTKKQGCAVERN 58
+KK F V K + +F + R+G +V+KK G A ER
Sbjct: 4 KKPFRIKKTSDFQRVFAKHKSFANRYFVVYSDTQPKEVDVSHWRIGLSVSKKIGKAHERV 63
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RR+ E+ + + D V++A+ K + + + +
Sbjct: 64 WVKRRISESF-NNISLFIPNNLDIVIVARPLVKGQKQKIIQDQLMHVL 110
>gi|332638154|ref|ZP_08417017.1| ribonuclease P [Weissella cibaria KACC 11862]
Length = 118
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +KK F LV + F + + R+G +V+KK G ER
Sbjct: 1 MRKSYRVKKEADFQLVFEQHHSVANKMFIVYTMER-EQPTHFRLGISVSKKVGLRGHERV 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V + + D ++IA+ A + + +
Sbjct: 60 WVKRRIRQSVLELKPNL-RQDVDILVIARPSAHDQDMAIIKKNLEHVFK 107
>gi|85060409|ref|YP_456111.1| ribonuclease P [Sodalis glossinidius str. 'morsitans']
gi|123518606|sp|Q2NQ69|RNPA_SODGM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84780929|dbj|BAE75706.1| ribonuclease P protein [Sodalis glossinidius str. 'morsitans']
Length = 119
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + P ++ L N+ PRVG TV K A ERNR
Sbjct: 7 PRELRLLTPNHFTFVFQQPQWAGTPHVTI--LGRLNTLGHPRVGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +E+ RL + D+V+IAK+ + L + RR+ R S
Sbjct: 65 IKRLTRESFRLHQHAL--PTMDFVVIAKKGVADLDNHTLTEALEKLWRRHCRQSQS 118
>gi|289551832|ref|YP_003472736.1| Ribonuclease P protein component [Staphylococcus lugdunensis
HKU09-01]
gi|289181363|gb|ADC88608.1| Ribonuclease P protein component [Staphylococcus lugdunensis
HKU09-01]
Length = 113
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F L+ + G+ F + N R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQLIYRHGKSVANRQFVVYTY--QNQIAHFRLGISVSKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA+ A + E+ + ++ K
Sbjct: 59 IKRAIRENFKVHKQDIIAK--DIIVIARHPAKNMTTLEIQSSLEHVLKIAK 107
>gi|298290372|ref|YP_003692311.1| ribonuclease P protein component [Starkeya novella DSM 506]
gi|296926883|gb|ADH87692.1| ribonuclease P protein component [Starkeya novella DSM 506]
Length = 133
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ + KR+ F G L+ + + + PR+G TVTKK G AVERNR+RRR
Sbjct: 1 MHRIVKRKDFLAAASGLRANSGPLLLQGRDRAD-DTAPRIGLTVTKKHGNAVERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
L+ AVR K G DYV++A+R AL PF +L + R K R S
Sbjct: 60 LRAAVRDALPRAGKDGFDYVIVARRAALGTPFADLVKDIERGIARLHSGRRPPKPAPRDS 119
>gi|307943179|ref|ZP_07658524.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
gi|307773975|gb|EFO33191.1| ribonuclease P protein component [Roseibium sp. TrichSKD4]
Length = 131
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L+KR +F V KG F ++ L + RVG+TVTKK G +V R+R++RR
Sbjct: 1 METLRKRAEFLAVSKGGRIGRRAFLIQGLARKGAAQ-SRVGYTVTKKTGNSVVRSRIKRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
L+ V + D+V++A++DAL PF ++ +
Sbjct: 60 LRAVVAALDPKEVPTEADFVIVARQDALTAPFPKMIADLKSGL 102
>gi|191639867|ref|YP_001989033.1| ribonuclease P [Lactobacillus casei BL23]
gi|238693017|sp|B3WBV6|RNPA_LACCB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|190714169|emb|CAQ68175.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Lactobacillus casei BL23]
Length = 118
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +KK +F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRIKKEAEFQNVFDHGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+++R +++++ + D+++IA++ A + + + +R
Sbjct: 59 QIKRYIRQSLLELKPNIDAQ-TDFLVIARKSANQLDMAGTKKNLIHVMR 106
>gi|224475496|ref|YP_002633102.1| ribonuclease P [Staphylococcus carnosus subsp. carnosus TM300]
gi|254808087|sp|B9DI94|RNPA_STACT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|222420103|emb|CAL26917.1| putative ribonuclease P protein component [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 115
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + + G+ F + ++ + ++G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNSDFQAIYRRGKSVANRQFVIYMMP-DKGLTHFKLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + +L ++IA+ A + E+ ++ K
Sbjct: 60 IKRAIRENFKVHKDDMLPRN--IIVIARHPAKDMTVLEIQKSLEHVLKVAK 108
>gi|189023101|ref|YP_001932842.1| ribonuclease P [Brucella abortus S19]
gi|189021675|gb|ACD74396.1| Bacterial ribonuclease P protein [Brucella abortus S19]
Length = 125
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
V+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKEA
Sbjct: 2 TVRNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEA 61
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+R A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 62 IRCHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTER 116
>gi|291461018|ref|ZP_06026478.2| ribonuclease P protein component [Fusobacterium periodonticum ATCC
33693]
gi|291379417|gb|EFE86935.1| ribonuclease P protein component [Fusobacterium periodonticum ATCC
33693]
Length = 112
Score = 77.1 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + K G G + + N N R GF +KK G A RNR++R
Sbjct: 2 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF--NKNKLDYSRFGFVASKKIGKAFCRNRIKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
+E +RL E + +D +++AK+ A I ++++ ++ +K
Sbjct: 60 LFREYIRLNIEKL-NDNYDIIIVAKKKAGEIIETIKYQDIEKDLNRILKNSK 110
>gi|307133249|ref|YP_003885265.1| protein C5 component of RNase P [Dickeya dadantii 3937]
gi|306530778|gb|ADN00709.1| protein C5 component of RNase P [Dickeya dadantii 3937]
Length = 119
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F+ V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGTPQITI--LGRPNTLGHPRIGLTVAKKHVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +E+ RL + D+V+IAK+ + + L + RR+ R ++
Sbjct: 65 IKRLTRESFRLHQHEL--PAMDFVVIAKKGVSELDNRTLTEALEKLWRRHCRLAHA 118
>gi|284993438|ref|YP_003411993.1| ribonuclease P protein component [Geodermatophilus obscurus DSM
43160]
gi|284066684|gb|ADB77622.1| ribonuclease P protein component [Geodermatophilus obscurus DSM
43160]
Length = 127
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNN---------SNLLPRVGFTVTKK 50
+ L++R F V + G P L L + PR GF V K
Sbjct: 2 LPAQARLRRRPDFTAVVRSGRRAGRPTMVLHYLPERPVTPTPGDAGTVGGPRAGFVVGKT 61
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G +V R+R+ RRL+ V + + D V+ A+ +A +L + R
Sbjct: 62 VGNSVVRHRVTRRLRAVVLDQLDRL-PPTADLVVRARPEAATATSVDLARDLSAGLDRVL 120
Query: 111 RSYYSGK 117
+
Sbjct: 121 EPRARTR 127
>gi|18311641|ref|NP_563575.1| ribonuclease P [Clostridium perfringens str. 13]
gi|110799284|ref|YP_697350.1| ribonuclease P [Clostridium perfringens ATCC 13124]
gi|110803108|ref|YP_699908.1| ribonuclease P [Clostridium perfringens SM101]
gi|168207738|ref|ZP_02633743.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|168211553|ref|ZP_02637178.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|168214847|ref|ZP_02640472.1| ribonuclease P protein component [Clostridium perfringens CPE str.
F4969]
gi|168218055|ref|ZP_02643680.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
gi|169343434|ref|ZP_02864434.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|182626427|ref|ZP_02954180.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|21263941|sp|Q8XH26|RNPA_CLOPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123049533|sp|Q0TLZ0|RNPA_CLOP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123341460|sp|Q0SPP9|RNPA_CLOPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|18146325|dbj|BAB82365.1| ribonuclease P protein component [Clostridium perfringens str. 13]
gi|110673931|gb|ABG82918.1| ribonuclease P protein component [Clostridium perfringens ATCC
13124]
gi|110683609|gb|ABG86979.1| ribonuclease P protein component [Clostridium perfringens SM101]
gi|169298386|gb|EDS80475.1| ribonuclease P protein component [Clostridium perfringens C str.
JGS1495]
gi|170660930|gb|EDT13613.1| ribonuclease P protein component [Clostridium perfringens E str.
JGS1987]
gi|170710468|gb|EDT22650.1| ribonuclease P protein component [Clostridium perfringens B str.
ATCC 3626]
gi|170713722|gb|EDT25904.1| ribonuclease P protein component [Clostridium perfringens CPE str.
F4969]
gi|177908301|gb|EDT70854.1| ribonuclease P protein component [Clostridium perfringens D str.
JGS1721]
gi|182379925|gb|EDT77404.1| ribonuclease P protein component [Clostridium perfringens NCTC
8239]
Length = 125
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNS-----NLLPRVGFTVTKKQGCAVER 57
+ L+K +F V + G+ L V N + +VG +V+KK G +V R
Sbjct: 2 LLSLRKNNEFRTVYRRGKSYANDLLVLYVYPNRKNVTKDGERFNKVGVSVSKKVGKSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R++R + E RL + + K G+D+V IA+ FK++ +++
Sbjct: 62 SRVKRLILENYRLNSSEL-KEGYDFVFIARVAINGKDFKQVGKAMNNLIKKA 112
>gi|242310497|ref|ZP_04809652.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239522895|gb|EEQ62761.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 109
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L ++ F +V + P F L N N RVGF V+KK G AV RN ++R
Sbjct: 1 MITLNTKKDFNIVYNSQKKWHNPHFILFFKENIKEN---RVGFCVSKKVGNAVCRNFIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RL+ R ++ D VL+AK + +K L NH+ + R K
Sbjct: 58 RLRSLYRASLPNLING--DMVLLAKNGLDKVDYKTLENHYKHALMRLKLVKQK 108
>gi|27469336|ref|NP_765973.1| ribonuclease P [Staphylococcus epidermidis ATCC 12228]
gi|57865941|ref|YP_187602.1| ribonuclease P [Staphylococcus epidermidis RP62A]
gi|242243257|ref|ZP_04797702.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251811362|ref|ZP_04825835.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|282874719|ref|ZP_06283598.1| ribonuclease P protein component [Staphylococcus epidermidis SK135]
gi|293367583|ref|ZP_06614236.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|29427693|sp|Q8CMN4|RNPA_STAES RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461260|sp|Q5HS37|RNPA_STAEQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27316886|gb|AAO06061.1|AE016752_94 ribonuclease P protein component [Staphylococcus epidermidis ATCC
12228]
gi|57636599|gb|AAW53387.1| ribonuclease P protein component [Staphylococcus epidermidis RP62A]
gi|242233206|gb|EES35518.1| ribonuclease P [Staphylococcus epidermidis W23144]
gi|251805111|gb|EES57768.1| ribonuclease P [Staphylococcus epidermidis BCM-HMP0060]
gi|281296435|gb|EFA88950.1| ribonuclease P protein component [Staphylococcus epidermidis SK135]
gi|291318296|gb|EFE58689.1| ribonuclease P protein component [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399916|gb|EFV88162.1| ribonuclease P protein component [Staphylococcus epidermidis
FRI909]
gi|329724155|gb|EGG60673.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU144]
gi|329736062|gb|EGG72335.1| ribonuclease P protein component [Staphylococcus epidermidis
VCU045]
Length = 115
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F + K G+ F + N + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQAIYKNGKSVANRQFVVYTYKNRDLKHF-RLGISVSKKLGNAVTRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ + ++ K
Sbjct: 60 IKRAIRENFKVHKQNIIAK--DIIVIARQPAKDMNTLEIQSSLEHVLKIAK 108
>gi|310644874|ref|YP_003949633.1| ribonuclease p protein component [Paenibacillus polymyxa SC2]
gi|309249825|gb|ADO59392.1| Ribonuclease P protein component [Paenibacillus polymyxa SC2]
Length = 116
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V + G+ F + RVG + +KK G AV RNR
Sbjct: 1 MQKKLRLRNRADFGRVYRHGKSFANHQFVVYWFRRREVEQF-RVGISASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
MRR +KE VR + +++ D + I ++ A+ ++EL + +R+ + +
Sbjct: 60 MRRIVKEIVRHHEQELVEQ-IDLIFIVRKGAVTKSYQELEKSVLHVLRKASLLKSTRR 116
>gi|309789713|ref|ZP_07684293.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
gi|308228199|gb|EFO81847.1| ribonuclease P protein component [Oscillochloris trichoides DG6]
Length = 150
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF ++ G P L ++ R GF V K+ G AV+RNR
Sbjct: 31 MKRAYRLRRPDQFRRARREGRTFATPLLLLNLVAGR--QRRTRCGFVVAKQIGGAVQRNR 88
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-ALFIPFKELCNHFVERVRRNKRSY 113
+RRL+E +RL + G+D VL+ + + +PF L E +RR +
Sbjct: 89 AKRRLREVMRLALPQI-TPGYDLVLVVRSADVIEMPFITLQTAVEELLRRAQVWR 142
>gi|320527121|ref|ZP_08028308.1| ribonuclease P protein component [Solobacterium moorei F0204]
gi|320132449|gb|EFW24992.1| ribonuclease P protein component [Solobacterium moorei F0204]
Length = 110
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +KKG P F + R+G +V+KK G AV RN
Sbjct: 1 MKVKNRIKKSEEFQSMIKKGTKVVNPSFVIYYQPKEKDEA--RIGISVSKKLGNAVHRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R+++ +D V+I + + + ++E N+ + + + K
Sbjct: 59 YKRQVRMMCHELV-DFQNTNYDMVMIIRFNYSSLSYEENKNNLEKLLIKAKIK 110
>gi|300174208|ref|YP_003773374.1| ribonuclease P protein component [Leuconostoc gasicomitatum LMG
18811]
gi|299888587|emb|CBL92555.1| Ribonuclease P protein component [Leuconostoc gasicomitatum LMG
18811]
Length = 116
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F LV K +F + L ++ R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPTDFQLVFNKHRSVANKYFIVYQLGKSDQKHF-RLGISVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR+++++ + D ++IA+ K + V ++
Sbjct: 60 VKRRIRQSILELKPQLPNE-LDILVIARPAVAKQSQKFIKEQIVHVLK 106
>gi|29830857|ref|NP_825491.1| RNase P component [Streptomyces avermitilis MA-4680]
gi|48474383|sp|Q82FE0|RNPA_STRAW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29607970|dbj|BAC72026.1| putative RNase P component [Streptomyces avermitilis MA-4680]
Length = 123
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R +L G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRVA-LLPPGSLVVVRALPGAGDADHAQLAQDLDAALQRL 117
>gi|310779693|ref|YP_003968026.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
gi|309749016|gb|ADO83678.1| ribonuclease P protein component [Ilyobacter polytropus DSM 2926]
Length = 113
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKK QF + K ++ ++SL + N N +VGF V+KK G AV RNR++R
Sbjct: 1 MNKLKKNEQFQNIYKTGIKAFGYYSLVYIKTNKENNHNQVGFVVSKKTGNAVCRNRLKRL 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDA----LFIPFKELCNHFVERVRRN 109
+E RL + + K +D V IAKR A + + ++ ++
Sbjct: 61 FREYYRLNEKKI-KKSYDIVFIAKRTAGVKVKTLKYYQMEKDLNLIFKKL 109
>gi|320161694|ref|YP_004174919.1| ribonuclease P protein component [Anaerolinea thermophila UNI-1]
gi|319995548|dbj|BAJ64319.1| ribonuclease P protein component [Anaerolinea thermophila UNI-1]
Length = 122
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ R F V++ L V+ NS R+G + G AV+RNR
Sbjct: 1 MKRRFRLRHRSDFERVRRAGKTIPHPLVLFVVA-PNSLDTVRIGVVAGRVVGSAVQRNRA 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L+ ++ + G D V A+R + F + E ++R
Sbjct: 60 KRWLRACLQEFLPAL-PPGWDVVAFARRPIIEAGFWKTRAAVEESLKRA 107
>gi|220905231|ref|YP_002480543.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254808064|sp|B8J2U6|RNPA_DESDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219869530|gb|ACL49865.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 130
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +++R +F +G F + VL L R G V++K G AV RNR
Sbjct: 6 LPRQLRIRRRVEFTACYERGRRYHTEHFLVFVLPRACPGLRARTGMAVSRKVGKAVVRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI--PFKELCNHFVERVRRNKR 111
++R L+E RL E + D V +AK+ A + + + +RR R
Sbjct: 66 VKRLLREFYRLHREEL-PVEADIVTVAKKHAGEAALDYARVAAELLPLLRRMAR 118
>gi|332687275|ref|YP_004457049.1| ribonuclease P protein component [Melissococcus plutonius ATCC
35311]
gi|332371284|dbj|BAK22240.1| ribonuclease P protein component [Melissococcus plutonius ATCC
35311]
Length = 112
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F V + F + L RVG +V KK G AV RN
Sbjct: 1 MKKAYRVKSEKDFQKVFYAKNSCANKRFVVYSLEKPEQKHF-RVGISVGKKVGNAVVRNS 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ ++ E +L +D+++IA+ + +E+ + + ++
Sbjct: 60 VKRKIRMSIYQLKEQILSE-YDFIIIARPGVQNLTSEEVRINLIHILK 106
>gi|159897295|ref|YP_001543542.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
gi|238687060|sp|A9AXK0|RNPA_HERA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159890334|gb|ABX03414.1| ribonuclease P protein component [Herpetosiphon aurantiacus ATCC
23779]
Length = 123
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F V++G P L V R G V K G AVERNR
Sbjct: 1 MQRSQRLRSPRDFRRVREGGRTWSHPLLVLSVAPAR--ANRVRCGIVVRKSLGTAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++EA RL + + + G D + I + ++++ +++ +
Sbjct: 59 YKRQVREATRLVYDQI-RPGWDVIFIVRAGFRTAAWEQIQQAVSRLLQQAQ 108
>gi|328958801|ref|YP_004376187.1| ribonuclease P [Carnobacterium sp. 17-4]
gi|328675125|gb|AEB31171.1| ribonuclease P [Carnobacterium sp. 17-4]
Length = 112
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F V G+ F + VL+ + RVG +V KK G AV RN+
Sbjct: 1 MRKTYRVKKEAEFQKVFHHGKSTANRQFVIYVLDKKD-QPHFRVGISVGKKIGNAVVRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R +++++ + K D+++IA++ A + E + ++ K
Sbjct: 60 VKRSIRQSLTELKPQL-KAEKDFIVIARKPAAEMTVLETKKSLMHVLKLAK 109
>gi|315644293|ref|ZP_07897463.1| ribonuclease P protein component [Paenibacillus vortex V453]
gi|315280668|gb|EFU43957.1| ribonuclease P protein component [Paenibacillus vortex V453]
Length = 128
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ R F+ V + + + RVG + +KK G AV RNRMRR +K
Sbjct: 18 RLRNRADFSRVYRHGKSFANHQFVVYWSRKKEVEQFRVGVSCSKKIGNAVVRNRMRRLVK 77
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
E VR ++ D + I ++ AL ++EL + +R++
Sbjct: 78 EIVRHHQHQII-EHIDLIFIVRKGALDKSYQELEKSVLHVLRKSSLLKAKR 127
>gi|259500779|ref|ZP_05743681.1| ribonuclease P protein component [Lactobacillus iners DSM 13335]
gi|302190770|ref|ZP_07267024.1| ribonuclease P [Lactobacillus iners AB-1]
gi|309804031|ref|ZP_07698112.1| ribonuclease P protein component [Lactobacillus iners LactinV
11V1-d]
gi|309804892|ref|ZP_07698954.1| ribonuclease P protein component [Lactobacillus iners LactinV
09V1-c]
gi|309805910|ref|ZP_07699942.1| ribonuclease P protein component [Lactobacillus iners LactinV
03V1-b]
gi|309807838|ref|ZP_07701770.1| ribonuclease P protein component [Lactobacillus iners LactinV
01V1-a]
gi|309809727|ref|ZP_07703581.1| ribonuclease P protein component [Lactobacillus iners SPIN
2503V10-D]
gi|312871282|ref|ZP_07731380.1| ribonuclease P protein component [Lactobacillus iners LEAF 3008A-a]
gi|312872695|ref|ZP_07732760.1| ribonuclease P protein component [Lactobacillus iners LEAF
2062A-h1]
gi|312873290|ref|ZP_07733345.1| ribonuclease P protein component [Lactobacillus iners LEAF 2052A-d]
gi|312874918|ref|ZP_07734937.1| ribonuclease P protein component [Lactobacillus iners LEAF 2053A-b]
gi|325912309|ref|ZP_08174706.1| ribonuclease P protein component [Lactobacillus iners UPII 143-D]
gi|325913659|ref|ZP_08176021.1| ribonuclease P protein component [Lactobacillus iners UPII 60-B]
gi|329919786|ref|ZP_08276737.1| ribonuclease P protein component [Lactobacillus iners SPIN 1401G]
gi|259167473|gb|EEW51968.1| ribonuclease P protein component [Lactobacillus iners DSM 13335]
gi|308163799|gb|EFO66065.1| ribonuclease P protein component [Lactobacillus iners LactinV
11V1-d]
gi|308165831|gb|EFO68052.1| ribonuclease P protein component [Lactobacillus iners LactinV
09V1-c]
gi|308167686|gb|EFO69833.1| ribonuclease P protein component [Lactobacillus iners LactinV
03V1-b]
gi|308168940|gb|EFO71026.1| ribonuclease P protein component [Lactobacillus iners LactinV
01V1-a]
gi|308169906|gb|EFO71945.1| ribonuclease P protein component [Lactobacillus iners SPIN
2503V10-D]
gi|311089663|gb|EFQ48088.1| ribonuclease P protein component [Lactobacillus iners LEAF 2053A-b]
gi|311091170|gb|EFQ49559.1| ribonuclease P protein component [Lactobacillus iners LEAF 2052A-d]
gi|311091737|gb|EFQ50116.1| ribonuclease P protein component [Lactobacillus iners LEAF
2062A-h1]
gi|311093296|gb|EFQ51642.1| ribonuclease P protein component [Lactobacillus iners LEAF 3008A-a]
gi|325475968|gb|EGC79137.1| ribonuclease P protein component [Lactobacillus iners UPII 143-D]
gi|325477018|gb|EGC80168.1| ribonuclease P protein component [Lactobacillus iners UPII 60-B]
gi|328937133|gb|EGG33561.1| ribonuclease P protein component [Lactobacillus iners SPIN 1401G]
Length = 123
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +K + F LV + G+ F L L+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQLVFETGQSMANKAFVLYQLDKVN-QPHFRVGISVGKKVGHNAVLRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ A+ ++K D+++IA+ + K + + ++
Sbjct: 60 RIKRCIRAAITEDKH-MIKKDVDFLVIARPYVKDLDMKCIKANLEHVMK 107
>gi|222056915|ref|YP_002539277.1| ribonuclease P protein component [Geobacter sp. FRC-32]
gi|221566204|gb|ACM22176.1| ribonuclease P protein component [Geobacter sp. FRC-32]
Length = 119
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L KR QF V G+ F + L + + ++G TV++K G AV RNR+
Sbjct: 11 TKDERLLKRSQFLHVSDAGKKIHTAHFIILGLVSAD---WTKIGITVSRKVGNAVCRNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR ++E RL + Y +IAKR A + ++++C + R
Sbjct: 68 RRLVREFYRLNKQHFAVA--YYNIIAKRGAEQLNYQQVCRELANALERL 114
>gi|146337897|ref|YP_001202945.1| ribonuclease P protein component [Bradyrhizobium sp. ORS278]
gi|146190703|emb|CAL74707.1| Ribonuclease P protein component (RNaseP protein) (Protein C5)
[Bradyrhizobium sp. ORS278]
Length = 135
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G P F ++ + R+GFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFLAVADGVRANSPAFVVQRRERGD-QGPVRIGFTVTKKNGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
E V+ ++ DYVL+ +RDAL F+ + + +RR R +
Sbjct: 62 ELVKRLDPLTMRPHSDYVLVGRRDALSRDFQTMLDDLTTALRRLDRPQARPQPR 115
>gi|94967250|ref|YP_589298.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
gi|94549300|gb|ABF39224.1| ribonuclease P protein component [Candidatus Koribacter versatilis
Ellin345]
Length = 154
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L + F LV +G F+ N PR+G+TV++ G AV+RNRM
Sbjct: 17 PKASRLLRHADFRLVYEQGRRHFSANFTAFYRANITEK-SPRIGYTVSRALGGAVDRNRM 75
Query: 61 RRRLKEAVRLCAEGVLK-HGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+RRL+EA R C G D V+ K+ L F L + + +++ SG+
Sbjct: 76 KRRLREATRACWAGFRPTFAVDVVVNPKKTVLATDFAVLTAEMQKALTVIEKAANSGQAN 135
Query: 120 SR 121
R
Sbjct: 136 PR 137
>gi|298528958|ref|ZP_07016361.1| ribonuclease P protein component [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510394|gb|EFI34297.1| ribonuclease P protein component [Desulfonatronospira thiodismutans
ASO3-1]
Length = 128
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 6 ILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R QF G + F + V N R+G T ++K G AV RNR++R +
Sbjct: 11 RLVRRPQFQACYAGGRRYQTKHFIIFV--RPNGRDYWRLGITASRKIGPAVLRNRIKRLV 68
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+EA RL ++ G DYV+++K+ + + ++ ++ +
Sbjct: 69 REAFRLNQH-LVPPGLDYVVVSKKRTDLPGLNLDMVQKQLMQLFQQIAPRTEKDLEQDPR 127
Query: 123 S 123
+
Sbjct: 128 A 128
>gi|70727676|ref|YP_254592.1| ribonuclease P [Staphylococcus haemolyticus JCSC1435]
gi|123659002|sp|Q4L2Z1|RNPA_STAHJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68448402|dbj|BAE05986.1| ribonuclease P protein component [Staphylococcus haemolyticus
JCSC1435]
Length = 114
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K G+ F + N++ R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKKNTDFQTIYKRGKSVANRQFVVYTY--NSNKDHFRLGISVSKKLGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ E ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKIHKEDIIAR--DIIVIARQPAKDMTTLEIQGSLEHVLKIAK 107
>gi|294781809|ref|ZP_06747142.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
gi|294481919|gb|EFG29687.1| ribonuclease P protein component [Fusobacterium sp. 1_1_41FAA]
Length = 111
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + K G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYKLGNKYFGNYSLIFF--NKNKLDYSRFGFVASKKIGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
+E +RL E + +D +++AK+ A I ++++ + +K
Sbjct: 59 LFREYIRLNIEKL-NANYDIIIVAKKKAGEIIETIKYQDIEKDLNRIFKNSK 109
>gi|253573860|ref|ZP_04851202.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846337|gb|EES74343.1| ribonuclease P [Paenibacillus sp. oral taxon 786 str. D14]
Length = 116
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ R F + + G+ + N R+G + +KK G AV RNR
Sbjct: 1 MHKQLRLRNRADFNRIYRFGKSFANRQLVVYWSNKPEIERF-RLGVSASKKIGNAVVRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
MRR LKE VRL + + D +LI + A+ + +K+L + +R+ SG+
Sbjct: 60 MRRMLKEIVRLHEAEI-RDHVDLILIVRNGAVGMEYKDLEKSVLHVLRKASLLRDSGR 116
>gi|291571999|dbj|BAI94271.1| ribonuclease P protein component [Arthrospira platensis NIES-39]
Length = 129
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN------NNSNLLPRVGFTVT-KKQG 52
+ + L+ + F V +G RK +L L + + R G +++ K
Sbjct: 2 LPQVNRLRAPKDFKAVYTRGLHRKTAHLTLRALKRLVPPEIDAGDPPSRFGISISQKVSK 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
AV RN ++R+++ +R + G D V++ K A+ + E+ + +
Sbjct: 62 RAVRRNLLKRQIRAGLRELLSKIS-PGWDVVIVVKPTAIECNYAEILRELEKLL 114
>gi|314935199|ref|ZP_07842552.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
gi|313656534|gb|EFS20273.1| ribonuclease P protein component [Staphylococcus hominis subsp.
hominis C80]
Length = 114
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F + K G+ F + L N + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQRIYKKGKSVANRQFVVYTLKNEYEH--FRLGISVSKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKVHKQDMISK--DIIVIARQPAKNMSTLEIQGSLEHVLKIAK 107
>gi|218291092|ref|ZP_03495115.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
LAA1]
gi|218238977|gb|EED06184.1| ribonuclease P protein component [Alicyclobacillus acidocaldarius
LAA1]
Length = 120
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK R F V KG+ L +N + RVGF++++K G AV RNR
Sbjct: 1 MQSQHRLKDSRDFRRVFRKGKSFASGRLVLYYCDNREAR--VRVGFSISRKVGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+ + + + D V++ + +A F +L +++ K
Sbjct: 59 LKRLLRAIFQRHLDELRDRPVDVVVVCRANAADADFHDLEREVERLLKKAK 109
>gi|229826867|ref|ZP_04452936.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
gi|229788485|gb|EEP24599.1| hypothetical protein GCWU000182_02251 [Abiotrophia defectiva ATCC
49176]
Length = 117
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
LK R+F V G+ + + V NN R+G +V+KK G +V R+R R
Sbjct: 4 NSLKNSREFKRVYDFGKSYANKYLVMYVYNNETEEN--RIGISVSKKVGNSVIRHRATRL 61
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
++E+VRL E + K G+D V+IA+ +K++ +
Sbjct: 62 IRESVRLNEEKIRK-GYDIVIIARGSIKDKKYKDVESA 98
>gi|300814762|ref|ZP_07095010.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511149|gb|EFK38401.1| ribonuclease P protein component [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 112
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M C ++K ++ V + + + NN + R GFT TKK G A +RN +
Sbjct: 1 MDRDCFIRKNSEYQKVYRAKKISSCRYITLFTKKNN-LNIARAGFTTTKKIGNACKRNFV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
RRR K R + K G+DYV +AK++A+ F + F+ ++R ++
Sbjct: 60 RRRFKAIYRDLYPLIYK-GYDYVFVAKKEAVDCDFTDFKKDFLNVLKRQRKVKN 112
>gi|305681595|ref|ZP_07404401.1| ribonuclease P protein component [Corynebacterium matruchotii ATCC
14266]
gi|305658755|gb|EFM48256.1| ribonuclease P protein component [Corynebacterium matruchotii ATCC
14266]
Length = 114
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVL-NNNNSNLLPRVGFTVTKKQGCAVERN 58
+ + + +F ++ G+ G L VL + + PR G V+K G AV R+
Sbjct: 2 LPSQHKITSSEEFRKTIRSGKRAGGGTVVLHVLFSRDVLTTKPRCGLVVSKAVGNAVTRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ R+L+ +RL + + G V+ A A +EL + + + +
Sbjct: 62 AVSRKLRAIIRLLFDDL-PPGTLIVIRALPAAAHANSEELSHDVQRALAKIRER 114
>gi|254391430|ref|ZP_05006632.1| ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|294813738|ref|ZP_06772381.1| Ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|326442159|ref|ZP_08216893.1| RNase P component [Streptomyces clavuligerus ATCC 27064]
gi|197705119|gb|EDY50931.1| ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
gi|294326337|gb|EFG07980.1| Ribonuclease P protein component [Streptomyces clavuligerus ATCC
27064]
Length = 123
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGSPDPHAPGESAPPTCAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + G V+ A A ++L ++R
Sbjct: 62 GAVVRNQVKRRLRHLIRDRLAAL-PPGSLVVVRALPGAGDADHQQLAQDLDAALQRL 117
>gi|315654128|ref|ZP_07907044.1| ribonuclease P protein component [Lactobacillus iners ATCC 55195]
gi|315488824|gb|EFU78470.1| ribonuclease P protein component [Lactobacillus iners ATCC 55195]
Length = 123
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERN 58
M +K + F LV + G+ F L L+ N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQLVFETGQSMANKAFVLYQLDKVNQQHF-RVGISVGKKVGHNAVLRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R++R ++ A+ ++K D+++IA+ + K + + ++
Sbjct: 60 RIKRCIRAAITEDKH-MIKKDVDFLVIARPYVKDLDMKCIKANLEHVMK 107
>gi|302552693|ref|ZP_07305035.1| ribonuclease P [Streptomyces viridochromogenes DSM 40736]
gi|302470311|gb|EFL33404.1| ribonuclease P [Streptomyces viridochromogenes DSM 40736]
Length = 123
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTEHRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHVPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + G V+ A + +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRERVAQL-PPGSLVVVRALPGSGDADHAQLARDLDAALQRL 117
>gi|91974550|ref|YP_567209.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
gi|91681006|gb|ABE37308.1| ribonuclease P protein component [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G GP F L+ ++ RVGFTVTKK G A ERNR+RRR++
Sbjct: 132 RLRQRADFIAVAGGLRISGPAFVLQGRRRDD-EGPVRVGFTVTKKIGTATERNRIRRRMR 190
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
E V+ + DYVL+ +R AL F + + R R
Sbjct: 191 ELVKRADRSFMLPNSDYVLVGRRAALSRDFAVMLGDLRSALDRIARRSSKPD 242
>gi|220919595|ref|YP_002494899.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957449|gb|ACL67833.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-1]
Length = 116
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L++RR+F V++ G + L + + PR+G TV+ K G AVERNR
Sbjct: 3 LPKAARLRRRREFVQVQQHGRRLYSGDVLVLALVS--GSPRPRIGITVSSKVGNAVERNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++R ++EA R + D V+IA+ AL +
Sbjct: 61 VKRWVREAWREIRPEL--PPVDLVVIARPAALQM 92
>gi|228474208|ref|ZP_04058945.1| ribonuclease P protein component [Staphylococcus hominis SK119]
gi|228271903|gb|EEK13240.1| ribonuclease P protein component [Staphylococcus hominis SK119]
Length = 114
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ F + K G+ F + L N + R+G +V+KK G AV RNR
Sbjct: 1 MEKAYRIKRNSDFQKIYKKGKSVANRQFVVYTLKNEYEH--FRLGISVSKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ + ++ D ++IA++ A + E+ ++ K
Sbjct: 59 IKRAIRENFKVHKQDMISK--DIIVIARQPAKNMSTLEIQGSLEHVLKIAK 107
>gi|239930177|ref|ZP_04687130.1| RNase P component [Streptomyces ghanaensis ATCC 14672]
gi|291438519|ref|ZP_06577909.1| ribonuclease P protein component [Streptomyces ghanaensis ATCC
14672]
gi|291341414|gb|EFE68370.1| ribonuclease P protein component [Streptomyces ghanaensis ATCC
14672]
Length = 123
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRQHLVVHLRSGATDPHAPGESAPPSRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + + G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRERVDQL-PPGSLVVVRALPPAGDADHAQLAQDLDAALQRL 117
>gi|160941466|ref|ZP_02088801.1| hypothetical protein CLOBOL_06357 [Clostridium bolteae ATCC
BAA-613]
gi|158435612|gb|EDP13379.1| hypothetical protein CLOBOL_06357 [Clostridium bolteae ATCC
BAA-613]
Length = 114
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F ++ + G + V+ R+G +V+KK G +V R+
Sbjct: 1 MKRFPSVKKNSEFQVIYRNGTSYANRLLVMYVMKTGEDEN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL +K G + +L+A+ A +K L ++
Sbjct: 59 ITRLLREIFRLN-NNRIKTGLNIILVARGAARQSDYKHLEGAYLHL 103
>gi|241889068|ref|ZP_04776372.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
gi|241864317|gb|EER68695.1| ribonuclease P protein component [Gemella haemolysans ATCC 10379]
Length = 114
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + +K + F + NN + R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRVKRSQDFDNIIRKKQSFANRQFVIYYQKNNLDH--MRLGISVSKKLGKAFERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++E + L +D ++IA+ A +PF E + ++R+K
Sbjct: 59 IKRYIRETFKT--RKELVKNYDIIVIARPGAKDMPFLEFGSSIDHVLKRSKLMKAKRS 114
>gi|169351634|ref|ZP_02868572.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
gi|169291856|gb|EDS73989.1| hypothetical protein CLOSPI_02415 [Clostridium spiroforme DSM 1552]
Length = 112
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F+ + K + F + L N+ R+G +V+KK G AV RN+
Sbjct: 1 MKKEYRVKKNEDFSRIIKRKQSMANRTFIIYYLKND--IGHARIGISVSKKLGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R+++ V+ L +DY++I + L + F F + +
Sbjct: 59 IKRQVRMIVKETIN--LDDNYDYIVIVRNKFLDLNFTSNLKEFNYLYEKILKRME 111
>gi|83950043|ref|ZP_00958776.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
gi|83837942|gb|EAP77238.1| ribonuclease P protein component [Roseovarius nubinhibens ISM]
Length = 87
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
++ N + + VGFT +KK G AV RNR +RRL+EA R + + G DYVLI
Sbjct: 1 MLVQARNRRDDDPAIGVGFTCSKKVGNAVARNRAKRRLREAARAVLPDLGRPGWDYVLIG 60
Query: 87 KRD-ALFIPFKELCNHFVERVRRNKRS 112
K + PF+ L + + RS
Sbjct: 61 KAEDTAARPFEALKGDLAFALSKLHRS 87
>gi|148258510|ref|YP_001243095.1| ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
gi|146410683|gb|ABQ39189.1| Ribonuclease P protein component [Bradyrhizobium sp. BTAi1]
Length = 136
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G P F ++ + R+GFTVTK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFLAVADGARANSPAFVVQRRERAD-QGPVRIGFTVTKNNGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
E V+ ++ DYVLI +RDAL F+ + + +RR R +
Sbjct: 62 ELVKRLDPLSMRPHSDYVLIGRRDALSRDFQTMLDDLQTTLRRLDRPQAKPQPR 115
>gi|237743158|ref|ZP_04573639.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|256027565|ref|ZP_05441399.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|260495362|ref|ZP_05815489.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289765524|ref|ZP_06524902.1| ribonuclease P protein component [Fusobacterium sp. D11]
gi|229433454|gb|EEO43666.1| ribonuclease P protein component [Fusobacterium sp. 7_1]
gi|260197140|gb|EEW94660.1| ribonuclease P [Fusobacterium sp. 3_1_33]
gi|289717079|gb|EFD81091.1| ribonuclease P protein component [Fusobacterium sp. D11]
Length = 111
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF--NKNKLECSRFGFVASKKIGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL + +D +++AK+ + + ++++ + +K
Sbjct: 59 LFREYIRLNINKL-NDNYDIIIVAKKKFGENIENLKYQDIKKDLDRIFKNSK 109
>gi|311696591|gb|ADP99464.1| ribonuclease P protein component [marine bacterium HP15]
Length = 135
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L + + V K P + +L N+ R+G +KK AV+RNR+
Sbjct: 7 PKSHRLLRPADYGKVFNDVQLKVPHRNFLILATPNNLGHARIGLIFSKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R+++E+ R G D V++ ++ + + + + RR ++ Y +
Sbjct: 67 KRQVRESFR---HQTDLPGLDLVILGRQGLVSLDNHSVRASMDDLWRRLRKKYAQSQP 121
>gi|315659997|ref|ZP_07912855.1| ribonuclease P protein component [Staphylococcus lugdunensis
M23590]
gi|315494898|gb|EFU83235.1| ribonuclease P protein component [Staphylococcus lugdunensis
M23590]
Length = 115
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+KK F L+ + G+ F + N R+G +V+KK G AV RN+++
Sbjct: 5 KAYRIKKNADFQLIYRHGKSVANRQFVVYTY--QNQIAHFRLGISVSKKIGNAVIRNKIK 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R ++E ++ + ++ D ++IA+ A + E+ + ++ K
Sbjct: 63 RAIRENFKVHKQDIIAK--DIIVIARHPAKNMTTLEIQSSLEHVLKIAK 109
>gi|220914668|ref|YP_002489977.1| ribonuclease P protein component [Arthrobacter chlorophenolicus A6]
gi|254808041|sp|B8H8Z3|RNPA_ARTCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219861546|gb|ACL41888.1| ribonuclease P protein component [Arthrobacter chlorophenolicus A6]
Length = 136
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ L+ F+ + +R G + + R+GF V+K G AV RN +
Sbjct: 2 LATRNRLRTSADFSTTVRSGVRNGRRNVVLYTAAIAAGEPSRIGFIVSKSVGNAVVRNLV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+EA G V+ A + + +L + + +
Sbjct: 62 KRRLREAGAASLREHGT-GLAIVVRALPASASASWDQLREDYDAALESTLNRLAGRPQRA 120
>gi|27383208|ref|NP_774737.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
gi|27356382|dbj|BAC53362.1| ribonuclease P protein component [Bradyrhizobium japonicum USDA
110]
Length = 132
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G P F L+ ++S R+GFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFLAVANGARVNSPAFVLQSRPRDDS-GPIRIGFTVTKKNGNAPERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
E V+ +++ HDYVL+ +RDAL PF + + + R ++ R
Sbjct: 62 ELVKRLEPVLMQPHHDYVLVGRRDALSRPFATMLDDLRIAFSKPARHTAKEQSKGR 117
>gi|254416227|ref|ZP_05029981.1| ribonuclease P protein component [Microcoleus chthonoplastes PCC
7420]
gi|196176909|gb|EDX71919.1| ribonuclease P protein component [Microcoleus chthonoplastes PCC
7420]
Length = 134
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 20/125 (16%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN-----------------NNNSNLLPR 42
+ LK R F V KG R G ++ L+ N + R
Sbjct: 2 LPQANRLKHWRDFKAVYQKGIRRYGRHLTVRGLHLPRVSHEKGLRSGKLQLNPKNLPPTR 61
Query: 43 VGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G +V+ K AV RNR++R+++ A+R + K G ++ + AL + +
Sbjct: 62 IGISVSQKVSKKAVVRNRLKRQIRAALRQLLPRL-KPGWHVIVGVRPSALECDYAQFLQE 120
Query: 102 FVERV 106
+ +
Sbjct: 121 LEQLL 125
>gi|311897305|dbj|BAJ29713.1| putative ribonuclease P protein component [Kitasatospora setae
KM-6054]
Length = 142
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN------------------NSNLLPR 42
+ L++R+ FA K R G + L R
Sbjct: 2 LPTENRLRRRQDFAAAVKRGRRAGRPLLVVHLQREAVPEAGSDRNSDSRPHVAEGLPPAR 61
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
GF V+K G AV RN ++RRL+ V + G V+ A A P+ +L +
Sbjct: 62 AGFVVSKAVGPAVVRNAVKRRLRHLVGERLSRL-PAGSLIVVRALPAAATAPYPDLAHDL 120
Query: 103 VERVRRNKRSYYSG 116
+RR RS +G
Sbjct: 121 DAALRRVLRSEPAG 134
>gi|149186356|ref|ZP_01864669.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
gi|148829945|gb|EDL48383.1| ribonuclease P protein component [Erythrobacter sp. SD-21]
Length = 127
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++ +++KR F +G P F L L N R G TVTKK G AV RNRM+
Sbjct: 3 PSLSVIRKRSDFLAANRGTRNAKPGFVL--LTRPNEGQGKRYGITVTKKIGNAVVRNRMK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
RR +E + HD++LI + + F
Sbjct: 61 RRFRELLWAALPDGGLPDHDHILIGREGGVERDF 94
>gi|329768088|ref|ZP_08259597.1| ribonuclease P [Gemella haemolysans M341]
gi|328838243|gb|EGF87855.1| ribonuclease P [Gemella haemolysans M341]
Length = 114
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + +K + F + NN + R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRVKRSQDFDNIIRKKQSFANRQFVIYYQKNNLDH--MRLGISVSKKLGKAFERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++E + +D ++IA+ A +PF E + ++R+K
Sbjct: 59 IKRYIRETFKT--RKEYVKNYDIIVIARPGAKELPFLEFGSSIDHVLKRSKLMKAKRS 114
>gi|326692345|ref|ZP_08229350.1| ribonuclease P [Leuconostoc argentinum KCTC 3773]
Length = 116
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F +V K + +F L L R+G +V+KK G A +R
Sbjct: 1 MRKTFRIKKPAEFQIVFNKHQSVANKYFILYQLQKPEQKHF-RLGLSVSKKVGKAHDRVW 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V + D ++IA+ K + ++
Sbjct: 60 VKRRIRQSVLELKPQL-PQELDLLIIARPAVAKKSQKFIKEQITHVLK 106
>gi|326804335|ref|YP_004322153.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651500|gb|AEA01683.1| ribonuclease P protein component [Aerococcus urinae
ACS-120-V-Col10a]
Length = 128
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K + F+LV +G+ + F + + RVG +V KK G AV RNR
Sbjct: 1 MRKSYRVKSEKDFSLVFHQGDSKANRQFVVYSIEK--EQKHFRVGLSVGKKIGNAVTRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R +++A+ +K D+++IA++ + ++ + +R
Sbjct: 59 VKRLIRQALTELKP-YIKSNVDFIIIARKPTKDMTQAQVKASLIHVMR 105
>gi|260461162|ref|ZP_05809411.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
gi|259033196|gb|EEW34458.1| ribonuclease P protein component [Mesorhizobium opportunistum
WSM2075]
Length = 117
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F V++GE R+G FF +EVL+ + +PRVGFTVTKK G AV RNR+RRRLK
Sbjct: 14 RLLKRAEFLAVRRGEKRRGRFFLVEVLDRGDG-GVPRVGFTVTKKVGNAVVRNRVRRRLK 72
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
EAVR+ A + G+DYV++ + DAL PF +L R+R
Sbjct: 73 EAVRVHAADDMMPGNDYVIVGRDDALRAPFGQLKAELSRRLR 114
>gi|296328800|ref|ZP_06871314.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154135|gb|EFG94939.1| ribonuclease P protein component RnpA [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 112
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +KK G A RNR++R
Sbjct: 2 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF--NKNKLEYSRFGFVASKKVGKAFCRNRIKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL + +D +++AK+ + + +K++ + +K
Sbjct: 60 LFREYIRLNINKI-NDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRVFKNSK 110
>gi|15925703|ref|NP_373237.1| ribonuclease P [Staphylococcus aureus subsp. aureus Mu50]
gi|15928298|ref|NP_375831.1| ribonuclease P [Staphylococcus aureus subsp. aureus N315]
gi|21284360|ref|NP_647448.1| ribonuclease P [Staphylococcus aureus subsp. aureus MW2]
gi|49484908|ref|YP_042132.1| ribonuclease P [Staphylococcus aureus subsp. aureus MRSA252]
gi|49487490|ref|YP_044711.1| ribonuclease P [Staphylococcus aureus subsp. aureus MSSA476]
gi|57651107|ref|YP_187525.1| ribonuclease P [Staphylococcus aureus subsp. aureus COL]
gi|156981028|ref|YP_001443287.1| ribonuclease P [Staphylococcus aureus subsp. aureus Mu3]
gi|221141514|ref|ZP_03566007.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253316839|ref|ZP_04840052.1| ribonuclease P [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255007484|ref|ZP_05146085.2| ribonuclease P [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|262049468|ref|ZP_06022340.1| ribonuclease P [Staphylococcus aureus D30]
gi|262051899|ref|ZP_06024114.1| ribonuclease P [Staphylococcus aureus 930918-3]
gi|284023036|ref|ZP_06377434.1| ribonuclease P [Staphylococcus aureus subsp. aureus 132]
gi|295429296|ref|ZP_06821918.1| ribonuclease P [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275688|ref|ZP_06858195.1| ribonuclease P [Staphylococcus aureus subsp. aureus MR1]
gi|54039265|sp|P66689|RNPA_STAAN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042179|sp|P66688|RNPA_STAAM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56749498|sp|Q6G5W3|RNPA_STAAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56749545|sp|Q6GD91|RNPA_STAAR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461249|sp|Q5HCI2|RNPA_STAAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228251|sp|A7X7A9|RNPA_STAA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|13702670|dbj|BAB43810.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus N315]
gi|14248488|dbj|BAB58875.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205804|dbj|BAB96496.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MW2]
gi|49243037|emb|CAG41771.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245933|emb|CAG44414.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285293|gb|AAW37387.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus COL]
gi|156723163|dbj|BAF79580.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus Mu3]
gi|259160226|gb|EEW45255.1| ribonuclease P [Staphylococcus aureus 930918-3]
gi|259162465|gb|EEW47035.1| ribonuclease P [Staphylococcus aureus D30]
gi|285818376|gb|ADC38863.1| Ribonuclease P protein component [Staphylococcus aureus 04-02981]
gi|295127055|gb|EFG56699.1| ribonuclease P [Staphylococcus aureus subsp. aureus EMRSA16]
gi|302334327|gb|ADL24520.1| ribonuclease P [Staphylococcus aureus subsp. aureus JKD6159]
gi|312831051|emb|CBX35893.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129542|gb|EFT85534.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS03]
gi|315195225|gb|EFU25613.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS00]
gi|315197917|gb|EFU28250.1| ribonuclease P [Staphylococcus aureus subsp. aureus CGS01]
Length = 115
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 60 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 108
>gi|225016762|ref|ZP_03705954.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
gi|224950430|gb|EEG31639.1| hypothetical protein CLOSTMETH_00674 [Clostridium methylpentosum
DSM 5476]
Length = 112
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LK + F + +G+ + P +L R+G TV+KK G AV RNR
Sbjct: 1 MKYTVSLKLNKDFKRLYYRGKFKASPVLVTYILKCR--GKQCRMGITVSKKIGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+RR +K A R G+D V +A+ A+ ++ +++
Sbjct: 59 VRRIIKAAYREVEPQFHLAGYDVVFVARSKAVEKKSTDISREMKKQLGALLAKK 112
>gi|126668971|ref|ZP_01739910.1| ribonuclease P [Marinobacter sp. ELB17]
gi|126626555|gb|EAZ97213.1| ribonuclease P [Marinobacter sp. ELB17]
Length = 138
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K + V K P + +L NS R+G KK AV+RNR+
Sbjct: 7 PKSHRLLKPADYGKVFDDVQLKVPHRNFLILATPNSLGHARIGLIFAKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RR++E RL + D +++ ++ + ++ ++ +R +R Y ++
Sbjct: 67 KRRIRETFRLKQQ---LPALDIIVLGRQGLAQLDNNQVNLALLDLWQRLERKYSKLQSTP 123
>gi|257067221|ref|YP_003153477.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
gi|256799101|gb|ACV29756.1| ribonuclease P protein component [Anaerococcus prevotii DSM 20548]
Length = 116
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN PR G T++KK G A +RN
Sbjct: 1 MEKRISLRKDLDFQRVYKKNKAFYNRDFTVLI--KNNGLNHPRFGITISKKIGKANQRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+L+E +RL + +G D V+I K+ + +L + + +
Sbjct: 59 LKRKLREILRLNYASI--NGVDIVIIPKKHTTDFTYDKLKKSLGHVLSKAFKK 109
>gi|32474816|ref|NP_867810.1| ribonuclease P protein component [Rhodopirellula baltica SH 1]
gi|48474354|sp|Q7UNR1|RNPA_RHOBA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|32445356|emb|CAD75357.1| probable ribonuclease P protein component [Rhodopirellula baltica
SH 1]
Length = 146
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 2 SNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL------------LPRVGFTVT 48
+ + +F +++G + + L ++ + R+G T+
Sbjct: 13 PKSSRVVRSSEFTKALRRGGVAANDCLVVFALPHDVPDADGEPSPDESKTVKCRLGVTIP 72
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KK G AV RNR +R ++EA RL + G DYV+ K+D +K + FV+ V R
Sbjct: 73 KKTGNAVVRNRWKRLIREAFRLNQTQL-PSGFDYVVRPKKDV-TADWKMIEKGFVKLVGR 130
Query: 109 NKRSYYSGKNFS 120
R S + S
Sbjct: 131 AVRRSQSSADRS 142
>gi|253702735|ref|YP_003023924.1| ribonuclease P [Geobacter sp. M21]
gi|259494108|sp|C6DYS3|RNPA_GEOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|251777585|gb|ACT20166.1| ribonuclease P protein component [Geobacter sp. M21]
Length = 116
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R +F +G F + L RVGFTV+KK G AV RN +
Sbjct: 7 PKAERLLRRPEFLQFNEGASKLHTQHFLV--LLKLKEGTGTRVGFTVSKKVGNAVVRNSI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RRL+E R + D ++AK+ A + F+++ R ++
Sbjct: 65 KRRLREFYRQNKSLFILA--DINIVAKKGADVLDFQQISTELAAAFGRLRKK 114
>gi|227502239|ref|ZP_03932288.1| ribonuclease P [Corynebacterium accolens ATCC 49725]
gi|227077063|gb|EEI15026.1| ribonuclease P [Corynebacterium accolens ATCC 49725]
Length = 126
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 5 CILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNL-------------LPRVGFTVTKK 50
L QF KG + + + ++N PR G V+K
Sbjct: 6 HKLTSPPQFRRTMKGSRRQGTRTVVVHARDTMSANSNGTMDNPAEVAATGPRFGLIVSKA 65
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
G AV R+R RRL+ + G D V+ A + ++L + +R+
Sbjct: 66 VGNAVVRHRTSRRLRHVCMTLIPKL-PAGVDVVIRALPASATATSEQLEKDITKALRK 122
>gi|119773153|ref|YP_925893.1| ribonuclease P [Shewanella amazonensis SB2B]
gi|166226738|sp|A1S1G7|RNPA_SHEAM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119765653|gb|ABL98223.1| ribonuclease P protein component [Shewanella amazonensis SB2B]
Length = 118
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
L QF V ++ + +L N+ PRVG TV K+ A +RNR++R +
Sbjct: 11 RLLTPAQFQAVFTNPVKASSA-EITLLATPNTQEHPRVGLTVPKKQVKRAHDRNRVKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ R+ + D V++ ++ + + EL + R+ R
Sbjct: 70 RESFRMHQHDL--PSLDIVVLVRKGVMDLENPELHKLVDKLWRKLSRR 115
>gi|192360289|ref|YP_001984276.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
gi|190686454|gb|ACE84132.1| ribonuclease P protein component [Cellvibrio japonicus Ueda107]
Length = 135
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMR 61
L R F V + +L+ N PR+G + K AV+RNR++
Sbjct: 7 KSLRLLCSRDFQTVFDDAPFRASHQLFLILSRPNQLPHPRLGLVIAKKHVSLAVQRNRIK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
R ++E RL + + G D ++++++ + E F ++++R + + S
Sbjct: 67 RLVREQFRLQQQELA--GLDVIVLSRKGVADLENAEFVAQFRQQLQRILKKARQREASS 123
>gi|223983637|ref|ZP_03633815.1| hypothetical protein HOLDEFILI_01096 [Holdemania filiformis DSM
12042]
gi|223964404|gb|EEF68738.1| hypothetical protein HOLDEFILI_01096 [Holdemania filiformis DSM
12042]
Length = 112
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + + P F L V + R+G +V KK G AV RN+
Sbjct: 1 MKKKYRVKKAGEFQTIIEHRKFVSCPSFVLYVKARKEEH--SRIGISVGKKLGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+++ + + D +LI ++ L + + +++ K Y+
Sbjct: 59 TKRQVRMMFQEIYD--FDENFDGILIVRKKFLEQSYSDNKKDLESLIKKVKIKKYA 112
>gi|325678536|ref|ZP_08158147.1| ribonuclease P protein component [Ruminococcus albus 8]
gi|324109755|gb|EGC03960.1| ribonuclease P protein component [Ruminococcus albus 8]
Length = 127
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K + F + + N R+G T KK G AV RNR++R ++
Sbjct: 7 IKDNKAFQRCYRSGRFAVCGYVCAYFY-PNGTAYNRLGITAGKKLGNAVCRNRVKRIVRA 65
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
A RLC + G+D V + + DA E+ +
Sbjct: 66 AYRLCESEM-PIGYDIVFVGRNDAAERTSAEIES 98
>gi|182437491|ref|YP_001825210.1| putative RNase P component [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778146|ref|ZP_08237411.1| Ribonuclease P protein component [Streptomyces cf. griseus
XylebKG-1]
gi|238688985|sp|B1VPE8|RNPA_STRGG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|178466007|dbj|BAG20527.1| putative RNase P component [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658479|gb|EGE43325.1| Ribonuclease P protein component [Streptomyces cf. griseus
XylebKG-1]
Length = 123
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQG 52
+ L++R FA + R G + L + +++ PR GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGDTDPHVTGETVPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R ++RRL+ VR + G V+ A A +L ++R
Sbjct: 62 GAVVRTAVKRRLRHLVRDRLAQL-PPGSLVVVRALPGAGDADHAQLARDLDAALQRL 117
>gi|120556801|ref|YP_961152.1| ribonuclease P protein component [Marinobacter aquaeolei VT8]
gi|254808071|sp|A1U7J6|RNPA_MARAV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120326650|gb|ABM20965.1| ribonuclease P protein component [Marinobacter aquaeolei VT8]
Length = 132
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K ++ V K P + +L + NS RVG +KK AV+RNR+
Sbjct: 7 PKSHRLLKPSDYSRVFNDVTLKVPHRNFLILASANSLGHARVGLIFSKKNLRLAVQRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R+++E RL G D +++ ++ + + + + R K+ Y
Sbjct: 67 KRQVRETFRL---QPDLPGLDIIVLGRQGLDRLDNDTVRSSLNDLWHRVKKKYRQSTP 121
>gi|19703354|ref|NP_602916.1| ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|22001933|sp|Q8RHA6|RNPA_FUSNN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|19713416|gb|AAL94215.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 111
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF--NKNKLEYSRFGFIASKKVGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E +RL + +D +++AK+ + + +K++ + +K
Sbjct: 59 LFREYIRLNINKI-NDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRVFKNSK 109
>gi|329315433|gb|AEB89846.1| Ribonuclease P protein component [Staphylococcus aureus subsp.
aureus T0131]
Length = 115
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 1 MEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D +LIA++ A + ++ N ++ K
Sbjct: 60 IKRAIRENFKVHKSHILAK--DIILIARQPAKDMTTLQIQNSLEHVLKIAK 108
>gi|239832644|ref|ZP_04680973.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
gi|239824911|gb|EEQ96479.1| ribonuclease P protein component [Ochrobactrum intermedium LMG
3301]
Length = 179
Score = 74.8 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCA 54
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G A
Sbjct: 43 KQILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQAARIGDKPRAGFTVTKKNGNA 102
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 103 VIRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRG 162
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 163 DGKRRTER 170
>gi|117620210|ref|YP_858700.1| ribonuclease P protein component [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166226696|sp|A0KQZ9|RNPA_AERHH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|117561617|gb|ABK38565.1| ribonuclease P protein component [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 119
Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V P +L N + PR+G V K AV RNR
Sbjct: 8 SRELRLLTPEHFKRVFAEPVRAASPQITLLACPNTLEH--PRLGLAVPKKALKRAVWRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R ++E+ RL + D V+IAK + +EL + R R
Sbjct: 66 VKRVVRESFRLNQANL--PAIDIVVIAKAGVKEMDNEELFKLLEKLWRTLSRR 116
>gi|160946602|ref|ZP_02093805.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
gi|158446986|gb|EDP23981.1| hypothetical protein PEPMIC_00560 [Parvimonas micra ATCC 33270]
Length = 113
Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ L+K R+F V + G+ F++ + + + G +VTKK G A +RN
Sbjct: 1 MNKEIRLRKNREFQTVYRRGKNFWNRNFTIFI--RPTNRKKVKFGVSVTKKFGKANKRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++RR+KE +RL + G++ V++ K++ L I + EL + + +
Sbjct: 59 IKRRIKEIIRLNVCDLGL-GYEMVILPKKNTLEIDYIELERSLLRLINFALKK 110
>gi|310659888|ref|YP_003937609.1| ribonuclease p [Clostridium sticklandii DSM 519]
gi|308826666|emb|CBH22704.1| ribonuclease P [Clostridium sticklandii]
Length = 108
Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+K F + KG+ + N+ RVG++++KK G AV RNR+RR +
Sbjct: 5 RLRKDSDFKNIYRKGKSLATKTLVFYFIKND--LGYTRVGYSISKKVGKAVTRNRIRRLI 62
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
KE ++ + LK G+D + I + + +KE+ R++
Sbjct: 63 KENLKDIPD--LKDGYDIIFIGRIPSSESDYKEIGKSVRYLFRKS 105
>gi|57234198|ref|YP_181758.1| ribonuclease P protein component [Dehalococcoides ethenogenes 195]
gi|123618575|sp|Q3Z7P1|RNPA_DEHE1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|57224646|gb|AAW39703.1| ribonuclease P protein component [Dehalococcoides ethenogenes 195]
Length = 120
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + L +R +++ V G G ++ + NS L RVGF V+KK G AVERNR
Sbjct: 1 MKHSNRLTRREEYSRVLASGGTYIGQLAVMKAV--PNSLELSRVGFIVSKKVGGAVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+E++R LK G D V IA+ A + E+ + + + + +
Sbjct: 59 AKRILRESLRTTG---LKQGWDIVFIARAKAATVKCAEMERVVKHLLGKAQILSKANEKT 115
Query: 120 SRKS 123
S K+
Sbjct: 116 SSKA 119
>gi|269129166|ref|YP_003302536.1| ribonuclease P protein component [Thermomonospora curvata DSM
43183]
gi|268314124|gb|ACZ00499.1| ribonuclease P protein component [Thermomonospora curvata DSM
43183]
Length = 122
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN-------SNLLPRVGFTVTKKQGCAVE 56
+++R +F V++G + +L ++ + PR GF V + G AV
Sbjct: 6 HRMRRRDEFTLTVRRGRRAGRTHIVVHLLRRDDLPEGLPAAERAPRAGFVVGRTVGNAVV 65
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RN++RRRL+ V + + G V+ A A KEL + R R
Sbjct: 66 RNKVRRRLRHLVAQHLDRL-PPGSLLVVRANPAAATAGHKELAADLESALDRLLRRR 121
>gi|320354722|ref|YP_004196061.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
gi|320123224|gb|ADW18770.1| ribonuclease P protein component [Desulfobulbus propionicus DSM
2032]
Length = 111
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +L+K +F V + G+ +G F++ V+ N+ R+G +V +K G AV RNR
Sbjct: 6 LPKAHLLRKTGEFQRVYRSGQRHRGNGFTVIVM--PNTLPWNRLGISVQRKTGNAVRRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R ++E RL D V+ + D F L +
Sbjct: 64 VKRLVREVFRLNRGD-FPAHCDVVIAVRPDFSLDSFAALRADIARTL 109
>gi|261750712|ref|ZP_05994421.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|261740465|gb|EEY28391.1| ribonuclease P protein component [Brucella suis bv. 5 str. 513]
gi|326411185|gb|ADZ68249.1| ribonuclease P [Brucella melitensis M28]
gi|326554476|gb|ADZ89115.1| ribonuclease P [Brucella melitensis M5-90]
Length = 123
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKEA+R
Sbjct: 2 RNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 62 CHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTER 114
>gi|251791814|ref|YP_003006535.1| ribonuclease P [Dickeya zeae Ech1591]
gi|271502721|ref|YP_003335747.1| ribonuclease P protein component [Dickeya dadantii Ech586]
gi|247540435|gb|ACT09056.1| ribonuclease P protein component [Dickeya zeae Ech1591]
gi|270346276|gb|ACZ79041.1| ribonuclease P protein component [Dickeya dadantii Ech586]
Length = 119
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F+ V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGTPQITI--LGRPNTLGHPRIGLTVAKKHVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R +E+ RL + D+V+IAK+ + + L + RR+ R ++
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVIAKKGVSELDNRTLTEALEKLWRRHCRLAHA 118
>gi|297193297|ref|ZP_06910695.1| ribonuclease P protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197718386|gb|EDY62294.1| ribonuclease P protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 123
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQG 52
+ L++R FA + R G + L + ++ GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGTTDPHAPGESASPTCAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + G V+ A A +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLIRDRLSEL-PPGSLVVVRALPGAGDAEHAQLARDLDAALQRL 117
>gi|149375639|ref|ZP_01893408.1| RNase P protein component [Marinobacter algicola DG893]
gi|149360041|gb|EDM48496.1| RNase P protein component [Marinobacter algicola DG893]
Length = 135
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K + V + P +L NS R+G +KK AV+RNR+
Sbjct: 7 PKSSRLLKPSDYGKVFDDVQLRVPHRHFLILATPNSLGHARIGLVFSKKNLKLAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+RR++E R D V++ +R + L E R ++
Sbjct: 67 KRRVRETFR---HEQEFPALDIVVLGRRGLTELDNTALNATLTELWARLRKKNRQ 118
>gi|304405891|ref|ZP_07387549.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
gi|304345134|gb|EFM10970.1| ribonuclease P protein component [Paenibacillus curdlanolyticus
YK9]
Length = 115
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ R F+ + +G + + + R+G + +KK G AV RNRM
Sbjct: 1 MHRKLRLRNRADFSRIYRGGKSFANGQFVVYWSKQPAAEPFRLGVSASKKIGNAVIRNRM 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
RR +KE VRL + D +LI ++ A+ + KEL + +++
Sbjct: 61 RRVVKEIVRLN-AERIAPRVDLILIVRKPAVDMKTKELERSVLHVLKKAGLLKQRA 115
>gi|189426687|ref|YP_001953864.1| ribonuclease P protein component [Geobacter lovleyi SZ]
gi|189422946|gb|ACD97344.1| ribonuclease P protein component [Geobacter lovleyi SZ]
Length = 123
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L R ++ + + L V N PR+G T ++K G AV RNR++
Sbjct: 9 PKQYRLLSRSEYLRLSDSKTVVSGRSFLVVW-RENGYEYPRLGITASRKTGNAVVRNRLK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R ++E R L G D +I +R A L + ++
Sbjct: 68 RHIREFFRHHCS--LLPGVDLNVIVRRQAAENSAAALSSELQRAFQQI 113
>gi|145301206|ref|YP_001144047.1| ribonuclease P [Aeromonas salmonicida subsp. salmonicida A449]
gi|166226697|sp|A4STS7|RNPA_AERS4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|142853978|gb|ABO92299.1| ribonuclease P protein component [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 119
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V P +L N + PR+G V K AV RNR
Sbjct: 8 SRELRLLTPEHFKRVFAEPVRAASPQITLLACPNTLEH--PRLGLAVPKKALKRAVWRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R ++E+ RL + D V+IAK + +EL + R R
Sbjct: 66 VKRVVRESFRLNQASL--PAIDIVVIAKGGVKEMDNEELFKLLEKLWRTLSRR 116
>gi|46397715|sp|Q7X5L2|RNPA_THEFI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908458|gb|AAO88971.1| RNase P protein subunit [Thermus filiformis]
Length = 240
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ LK R F +KKG +G + L VG V+KK G AV RN++R
Sbjct: 136 KGLVSLKGDRAFQRLKKGRSGRGRLVLVRWLPRQE---GVAVGIVVSKKVGKAVVRNKVR 192
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + D ++IA+ +A F EL ++++
Sbjct: 193 ----RRIREILRRLHLPPADLLVIAQPEAKDAGFAELARDLFLALKKS 236
>gi|239624138|ref|ZP_04667169.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520524|gb|EEQ60390.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 114
Score = 74.4 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K R+F + K G + V+ + R+G +V++K G ++ R+
Sbjct: 1 MKRFPSVRKNREFQDIYKHGTSYANRLLVMYVMESGEDGN--RIGISVSRKVGNSIVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R L+E RL + + G + +++A+ A +K+L ++
Sbjct: 59 ITRLLREIFRLNNSRI-RTGLNIIVVARVAAKKSDYKDLEGAYLHL 103
>gi|332672292|ref|YP_004455300.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
gi|332341330|gb|AEE47913.1| ribonuclease P protein component [Cellulomonas fimi ATCC 484]
Length = 122
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVL-NNNNSNLLPRVGFTVTKKQGCAVERN 58
+ +++ F V++G + + + P VG V+K G AV RN
Sbjct: 2 LPAAHRMRRAADFEQAVRRGARSGRETLVVHLTTKTDPGPDGPVVGLVVSKAVGTAVRRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++RRL+E VR VL G V+ A A PF +L
Sbjct: 62 LVKRRLRELVRARL-DVLPAGSRIVVRALPPAAGAPFAQLGADLDS 106
>gi|38234913|ref|NP_940680.1| ribonuclease P [Corynebacterium diphtheriae NCTC 13129]
gi|60390471|sp|Q6NE96|RNPA_CORDI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|38201178|emb|CAE50903.1| Putative ribonuclease P [Corynebacterium diphtheriae]
Length = 119
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN-----NNNSNLLPRVGFTVTKKQGCA 54
+ + L QF ++KG+ L N + PR G V+K G A
Sbjct: 2 LPSQHKLSNSEQFRATIRKGKRAGRSTVVLHFYAEATAGNLATAGGPRFGLVVSKAVGNA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
V R+R+ R+L+ V + + V+ A A +EL + + R
Sbjct: 62 VTRHRVSRQLRHVV-IAMKDQFPASSHVVVRALPPAATASSEELRADVQAALDKLNRKR 119
>gi|311741701|ref|ZP_07715523.1| ribonuclease P protein component [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303222|gb|EFQ79303.1| ribonuclease P protein component [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 120
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 9/116 (7%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNL-------LPRVGFTVTKKQG 52
+ L QF KG + +N ++ PR G V+K G
Sbjct: 2 LPAQHKLTSPTQFRRTMKGSRRAGTRTVVVHARDNAGTDKAADIAATGPRFGLIVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
AV R+R RRL+ + D V+ A + ++L + +R+
Sbjct: 62 NAVVRHRTSRRLRHVCMTFIPKL-PASVDVVIRALPASATASSEQLEKDLAKALRK 116
>gi|332702556|ref|ZP_08422644.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
gi|332552705|gb|EGJ49749.1| Ribonuclease P protein component [Desulfovibrio africanus str.
Walvis Bay]
Length = 137
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L R +F G F VL + + R+G VT+K G AV RNR+
Sbjct: 7 PKRNRLLSRPEFLACYDGGRRLNSRHFIAYVL--PHEHGSWRLGLAVTRKVGSAVRRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERVRRN 109
+R L+E RL + + D V++ KR DA + +++ + R
Sbjct: 65 KRVLREYFRLHQHELSEL-MDIVVVPKRHVDASSLDLRQVEAELTPMLVRA 114
>gi|325478863|gb|EGC81973.1| ribonuclease P protein component [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 116
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN + PR GFT++KK G A RN
Sbjct: 1 MEKRISLRKDTDFQRVYKKNQAFYNRDFTILIKKNNLDH--PRFGFTISKKVGKANVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L++ VRL + + D V+I K+ + +L + + +
Sbjct: 59 LKRKLRDIVRLNYSNI--NNVDIVIIPKKHTTDFTYDKLKKSLGHVLSKAFKKK 110
>gi|167755167|ref|ZP_02427294.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|237733409|ref|ZP_04563890.1| ribonuclease P protein component [Mollicutes bacterium D7]
gi|167705217|gb|EDS19796.1| hypothetical protein CLORAM_00672 [Clostridium ramosum DSM 1402]
gi|229383444|gb|EEO33535.1| ribonuclease P protein component [Coprobacillus sp. D7]
Length = 112
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M ++K F+ + K + F + L N+ + R+G +V+KK G AV RN+
Sbjct: 1 MKKEFRVRKNEDFSRIIKKKQSMANRSFIIYYLKNDLDHA--RIGISVSKKLGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R+++ ++ +DY++I + L + F N ++ +
Sbjct: 59 IKRQVRMMLQQTIN--FDDNYDYIVIIRNKYLDLDFNSNLNELKYLYKKILKRMEK 112
>gi|152968451|ref|YP_001364235.1| ribonuclease P protein component [Kineococcus radiotolerans
SRS30216]
gi|189043737|sp|A6WGN2|RNPA_KINRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151362968|gb|ABS05971.1| ribonuclease P protein component [Kineococcus radiotolerans
SRS30216]
Length = 120
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 41/109 (37%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+S L+ + F + K R G + + RVGF V+K G +V R+R
Sbjct: 2 LSAEHRLRHKDDFTVALKNGARAGTRRLVLHWAVTDRAHPTRVGFVVSKAVGGSVVRHRT 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RRL+ + G V+ A A EL +RR
Sbjct: 62 QRRLRHVAAGRLTTLPALGGLLVVRALPAAGTATSAELAVDVDRGLRRL 110
>gi|294792399|ref|ZP_06757546.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
gi|294456298|gb|EFG24661.1| ribonuclease P protein component [Veillonella sp. 6_1_27]
Length = 119
Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 5 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRM-PVAKQPTRIGFVTGKKVGCAVERNRA 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + +++ + +R++K
Sbjct: 64 RRLMKEVYRLNQHSI-REGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 112
>gi|291457889|ref|ZP_06597279.1| ribonuclease P protein component [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419433|gb|EFE93152.1| ribonuclease P protein component [Oribacterium sp. oral taxon 078
str. F0262]
Length = 121
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + +G+ R ++ V N R+G + +KK G +V R+
Sbjct: 1 MKRFPSVKKSADYQRAYQRGKSRANDCLAVYVFPNGMEGN--RLGISCSKKIGNSVVRHG 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ R+L+E R LK G D +++ ++ + ++++ ++E R+
Sbjct: 59 LARKLREIFRRNKN--LKQGLDIIVVVRKASASADYRKIERAYLELCSRHH 107
>gi|151222825|ref|YP_001333647.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. Newman]
gi|150375625|dbj|BAF68885.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus str. Newman]
Length = 118
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 4 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 63 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 111
>gi|217077889|ref|YP_002335607.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
gi|217037744|gb|ACJ76266.1| ribonuclease P protein component [Thermosipho africanus TCF52B]
Length = 131
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK R+ V K G+ + +F + N + F+V KK G AV+RN++
Sbjct: 12 KKEERLKLRKDILKVYKNGKSIQSSYFVILYCKN--GLDYSKFAFSVKKKFGKAVKRNKV 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK----RDALFIPFKELCNHFVERVRRN 109
+R ++E VR + G+DY++I + +D I F + F+E R
Sbjct: 70 KRWMREIVRTNKMNI-PKGYDYLIIVRKMLSKDFEQIQFSQFKEAFLELFERI 121
>gi|119947211|ref|YP_944891.1| ribonuclease P protein component [Psychromonas ingrahamii 37]
gi|166226734|sp|A1T0M7|RNPA_PSYIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119865815|gb|ABM05292.1| ribonuclease P protein component [Psychromonas ingrahamii 37]
Length = 118
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V K + P+ +L L N+ PR+G + K AV RNR
Sbjct: 7 SRELRLLTPEDFKPVFKNAVPAVSPYLTL--LARKNTLDHPRIGMAIPKKHIKRAVGRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RR ++E R + D V+IAK + +E+ + R+ +
Sbjct: 65 IRRIVREQFRHQQHQL--PAIDIVVIAKAGIADLSNQEINKILDKLWRKLVQR 115
>gi|269798912|ref|YP_003312812.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
gi|269095541|gb|ACZ25532.1| ribonuclease P protein component [Veillonella parvula DSM 2008]
Length = 121
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 7 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRM-PVAKQPTRIGFVTGKKVGCAVERNRA 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + +++ + +R++K
Sbjct: 66 RRLMKEVYRLNQHAI-REGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|114568079|ref|YP_755233.1| RNase P protein component [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317080|sp|Q0ATU2|RNPA_SYNWW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114339014|gb|ABI69862.1| ribonuclease P protein component [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 119
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ R++ V KG+ G F + + N N R GF KK G AV RNR
Sbjct: 2 LDKKARIRTSREYRNVFEKGKRLSGRFLIIYYVENALDNN--RFGFITNKKIGMAVIRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R+L+ VR V K+ HD VL+A+ F+ + ++ +++
Sbjct: 60 IKRQLRAIVREYQGQV-KNKHDIVLVARAGIGKSSFEGMEKDYIAIMKKA 108
>gi|85858987|ref|YP_461189.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
gi|123516277|sp|Q2LSG2|RNPA_SYNAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85722078|gb|ABC77021.1| ribonuclease P protein component [Syntrophus aciditrophicus SB]
Length = 119
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++KRR + + + G+ F++ V + N PR+G TVTKK G AV+RNR
Sbjct: 6 LKKSERIRKRRSYLQIYQHGKRSFTKHFTIVV--SENDLDFPRLGMTVTKKIGNAVKRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R ++E RL + K D V+IAK + + + ++C + +
Sbjct: 64 IKRLIREFFRLN-KDRFKASQDIVIIAKGNTSSMKYADVCRELGVLLTK 111
>gi|197124877|ref|YP_002136828.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
gi|196174726|gb|ACG75699.1| ribonuclease P protein component [Anaeromyxobacter sp. K]
Length = 116
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L++RR+F V++ G + L + + PR+G TV+ K G AVERNR
Sbjct: 3 LPKAARLRRRREFVQVQQHGRRLYSGDVLVLALVSGS--PRPRIGITVSSKVGNAVERNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++R ++EA R D V+IA+ AL +
Sbjct: 61 VKRWVREAWREIRPEY--PPVDLVVIARPAALRM 92
>gi|323439700|gb|EGA97418.1| ribonuclease P [Staphylococcus aureus O11]
gi|323443273|gb|EGB00890.1| ribonuclease P [Staphylococcus aureus O46]
Length = 117
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHMLAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|254520698|ref|ZP_05132754.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
gi|226914447|gb|EEH99648.1| ribonuclease P protein component [Clostridium sp. 7_2_43FAA]
Length = 116
Score = 74.0 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVER 57
+ L+K +F LV + G+ L NN + +VG +V+KK G +V R
Sbjct: 2 VYRLRKNNEFKLVYRRGKSLANNLLVLYTFNNRKNKTEDNLTYNKVGISVSKKVGNSVVR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +R + E+ RL + + K G+D+V +A+ F E+ N + +
Sbjct: 62 SRSKRLITESYRLNEKDL-KSGYDFVFVARSAIKGKSFSEVENAMKKLFLKA 112
>gi|297572343|ref|YP_003698117.1| ribonuclease P protein component [Arcanobacterium haemolyticum DSM
20595]
gi|296932690|gb|ADH93498.1| ribonuclease P protein component [Arcanobacterium haemolyticum DSM
20595]
Length = 120
Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAVE 56
+ + L+K +FA + R G + + + ++L +VGF V KK G +V
Sbjct: 2 LPAVNRLRKSGEFARTIRHGRRSGNSLVVVYFDVEDIIDEADLCTKVGFVVGKKVGNSVI 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+ + R+L+ R + K G V+ A DA +EL ++R++
Sbjct: 62 RHTVARKLRHVTRELLPNM-KPGT-VVVRANPDAAHATSQELLTALTNGLKRSR 113
>gi|237736111|ref|ZP_04566592.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
gi|229421822|gb|EEO36869.1| ribonuclease P protein component [Fusobacterium mortiferum ATCC
9817]
Length = 112
Score = 73.6 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK +F ++ + ++SL N N L R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKNGEFQIIYNSGRKSFGYYSLIFFKK-NDNNLKRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
R E + K G+D + +AK+ A + F ++ + ++ K
Sbjct: 63 YYRQNEESL-KDGYDIIFVAKKTAGEKFKFLKFGDIKKDLDKTLKNVK 109
>gi|254302382|ref|ZP_04969740.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322574|gb|EDK87824.1| ribonuclease P [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 111
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGNYSLIFF--NKNKLEYSRFGFVASKKVGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+E ++L + + +D +++AK+ + + +K++ + +K
Sbjct: 59 LFREYIKLNIDKI-NDNYDIIIVAKKKFGENIEDLKYKDIEKDLNRIFKNSK 109
>gi|238018225|ref|ZP_04598651.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC 17748]
gi|237864696|gb|EEP65986.1| hypothetical protein VEIDISOL_00049 [Veillonella dispar ATCC 17748]
Length = 121
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 7 LKKARRLTHNNEYRLVYKHGKYEVGRMCVLYRM-PVAKQSTRIGFVTGKKVGCAVERNRA 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + +++ + +R++K
Sbjct: 66 RRLMKEVYRLNQHSI-REGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|239942673|ref|ZP_04694610.1| putative RNase P component [Streptomyces roseosporus NRRL 15998]
gi|239989132|ref|ZP_04709796.1| putative RNase P component [Streptomyces roseosporus NRRL 11379]
gi|291446134|ref|ZP_06585524.1| ribonuclease P protein component [Streptomyces roseosporus NRRL
15998]
gi|291349081|gb|EFE75985.1| ribonuclease P protein component [Streptomyces roseosporus NRRL
15998]
Length = 123
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQG 52
+ L++R FA + R G + L + ++ PR GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGETDPHVTGETVPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R ++R+L+ VR + G V+ A A +L ++R
Sbjct: 62 GAVVRTAVKRKLRHLVRDRLAQL-PPGSLVVVRALPGAGDADHAQLARDLDAALQRL 117
>gi|295425823|ref|ZP_06818504.1| ribonuclease P protein component [Lactobacillus amylolyticus DSM
11664]
gi|295064516|gb|EFG55443.1| ribonuclease P protein component [Lactobacillus amylolyticus DSM
11664]
Length = 129
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V K GE F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQHVFKAGESVANRAFVIYKIEKTENKHF-RVGISVGKKVGHTAVIRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + D+++I + A E+ + + +
Sbjct: 60 RLKRYIRAVITEYKTEID-PHIDFLVITRPYARNFDMTEVRKNLIHALTLAHVIEKMPDG 118
>gi|329769248|ref|ZP_08260666.1| ribonuclease P [Gemella sanguinis M325]
gi|328839339|gb|EGF88920.1| ribonuclease P [Gemella sanguinis M325]
Length = 114
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK + F + +K + F + N + R+G +V+KK G A ERNR
Sbjct: 1 MKKEYRVKKSQDFDNIIRKKQSFANRQFVIYYQENKLDH--MRLGISVSKKLGKAHERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R ++E+ + +D ++I + A + F E + ++R+K
Sbjct: 59 LKRYVRESFKT--RKDFLKNYDIIIIVRPAAKGLSFLEFGSSIDHVLKRSKLYRGKR 113
>gi|110632736|ref|YP_672944.1| ribonuclease P [Mesorhizobium sp. BNC1]
gi|123058254|sp|Q11LE6|RNPA_MESSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110283720|gb|ABG61779.1| ribonuclease P protein component [Chelativorans sp. BNC1]
Length = 120
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L KR +F V++G +G F LE+L + + PRVG TVTKK G AVERNR+RRRL
Sbjct: 11 GRLTKRAEFLAVQRGLKLRGRLFLLELLARGDDD-PPRVGITVTKKVGNAVERNRIRRRL 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+EAVR+ A + G DYV++ +R+ L PF L + R+R NK +
Sbjct: 70 REAVRVHAADDMATGTDYVIVGRREILDAPFGALKDELSRRIRGNKPAR 118
>gi|313665771|ref|YP_004047642.1| ribonuclease P protein component [Mycoplasma leachii PG50]
gi|312949607|gb|ADR24203.1| ribonuclease P protein component [Mycoplasma leachii PG50]
Length = 109
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N I+KK +F + + K F + N+ S + G +V KK G AV RN+
Sbjct: 1 MKNKRIIKKNFEFQEIINYKKTIKNFCFVIYYKENDQS--YLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R V D +++ ++ L + + L V+ ++ K
Sbjct: 59 VKRQIRMILRQNISEVGTVSKDIIILVRKSVLELKYATLSKSLVKLIKEIK 109
>gi|317057910|ref|YP_004106377.1| ribonuclease P protein component [Ruminococcus albus 7]
gi|315450179|gb|ADU23743.1| ribonuclease P protein component [Ruminococcus albus 7]
Length = 124
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K ++F + + N R+G T KK G AV RNR++R ++
Sbjct: 7 IKDNKEFQRCYRSGRYTVCGYVCAYFY-PNGTPFNRLGITAGKKLGNAVCRNRVKRIVRA 65
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
A RLC + G+D V + + DA E+ +
Sbjct: 66 AYRLCETEM-PIGYDIVFVGRNDAADRTSAEIES 98
>gi|42519905|ref|NP_965835.1| ribonuclease P [Lactobacillus johnsonii NCC 533]
gi|67461478|sp|Q74H92|RNPA_LACJO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|41584195|gb|AAS09801.1| ribonuclease P protein component [Lactobacillus johnsonii NCC 533]
gi|329668162|gb|AEB94110.1| ribonuclease P protein component [Lactobacillus johnsonii DPC 6026]
Length = 122
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + + D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATLTELKPEI-RPDLDFLVIARPYARDFDMGRTKKNLIHVLRLAK 110
>gi|319936676|ref|ZP_08011089.1| ribonuclease P protein component [Coprobacillus sp. 29_1]
gi|319808233|gb|EFW04798.1| ribonuclease P protein component [Coprobacillus sp. 29_1]
Length = 111
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK F + K + F + N+ +VG +V+KK G AV RN+
Sbjct: 1 MKKEYRIKKNEDFQTIIKDKKSVANRKFVIYYKVNDC---HLKVGISVSKKLGNAVVRNK 57
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+++ V + D+++I + L +K+ + +
Sbjct: 58 TKRQVRMMVHDVFDK--TQKMDFIVIVRNKFLESSYKDNIEDLKYLYDKINKRMEK 111
>gi|302520511|ref|ZP_07272853.1| ribonuclease P [Streptomyces sp. SPB78]
gi|302429406|gb|EFL01222.1| ribonuclease P [Streptomyces sp. SPB78]
Length = 123
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 9/113 (7%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQGCAVE 56
L++R F+ + R G + L + + R GF V+K G AV
Sbjct: 6 NRLRRREDFSTAVRRGRRAGRPLLVVHLKSGSTDPHATGENTPPVRAGFVVSKAVGKAVV 65
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R ++R+L+ +R +L G V+ A A +L ++R
Sbjct: 66 RTSVKRKLRHLIRDRLS-LLPPGSLVVVRALPGAGDADHAQLARDLDAALKRL 117
>gi|87161522|ref|YP_495281.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88196668|ref|YP_501499.1| ribonuclease P [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148269144|ref|YP_001248087.1| ribonuclease P [Staphylococcus aureus subsp. aureus JH9]
gi|150395226|ref|YP_001317901.1| ribonuclease P [Staphylococcus aureus subsp. aureus JH1]
gi|161510922|ref|YP_001576581.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253730398|ref|ZP_04864563.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733840|ref|ZP_04868005.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH130]
gi|257424195|ref|ZP_05600624.1| ribonuclease P [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426872|ref|ZP_05603274.1| ribonuclease P [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429508|ref|ZP_05605895.1| ribonuclease P [Staphylococcus aureus subsp. aureus 68-397]
gi|257432155|ref|ZP_05608518.1| ribonuclease P [Staphylococcus aureus subsp. aureus E1410]
gi|257435116|ref|ZP_05611167.1| ribonuclease P [Staphylococcus aureus subsp. aureus M876]
gi|257793537|ref|ZP_05642516.1| ribonuclease P [Staphylococcus aureus A9781]
gi|258411157|ref|ZP_05681436.1| ribonuclease P [Staphylococcus aureus A9763]
gi|258420939|ref|ZP_05683873.1| ribonuclease P [Staphylococcus aureus A9719]
gi|258423239|ref|ZP_05686131.1| ribonuclease P [Staphylococcus aureus A9635]
gi|258438578|ref|ZP_05689801.1| ribonuclease P protein component [Staphylococcus aureus A9299]
gi|258443966|ref|ZP_05692304.1| ribonuclease P protein component [Staphylococcus aureus A8115]
gi|258446218|ref|ZP_05694378.1| ribonuclease P protein component [Staphylococcus aureus A6300]
gi|258449123|ref|ZP_05697229.1| ribonuclease P protein component [Staphylococcus aureus A6224]
gi|258451368|ref|ZP_05699399.1| ribonuclease P protein component [Staphylococcus aureus A5948]
gi|258454399|ref|ZP_05702367.1| ribonuclease P protein component [Staphylococcus aureus A5937]
gi|269204350|ref|YP_003283619.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ED98]
gi|282894278|ref|ZP_06302508.1| ribonuclease P [Staphylococcus aureus A8117]
gi|282902630|ref|ZP_06310523.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus C160]
gi|282907046|ref|ZP_06314894.1| ribonuclease P [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910025|ref|ZP_06317833.1| ribonuclease P [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282912273|ref|ZP_06320069.1| ribonuclease P [Staphylococcus aureus subsp. aureus WBG10049]
gi|282912913|ref|ZP_06320705.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M899]
gi|282920718|ref|ZP_06328437.1| ribonuclease P [Staphylococcus aureus A9765]
gi|282921289|ref|ZP_06329007.1| ribonuclease P [Staphylococcus aureus subsp. aureus C427]
gi|282922541|ref|ZP_06330231.1| ribonuclease P [Staphylococcus aureus subsp. aureus C101]
gi|282927749|ref|ZP_06335363.1| ribonuclease P [Staphylococcus aureus A10102]
gi|283767789|ref|ZP_06340704.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus H19]
gi|283959483|ref|ZP_06376924.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497966|ref|ZP_06665820.1| ribonuclease P [Staphylococcus aureus subsp. aureus 58-424]
gi|293511556|ref|ZP_06670250.1| ribonuclease P [Staphylococcus aureus subsp. aureus M809]
gi|293550165|ref|ZP_06672837.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M1015]
gi|294849827|ref|ZP_06790567.1| ribonuclease P [Staphylococcus aureus A9754]
gi|295406863|ref|ZP_06816667.1| ribonuclease P [Staphylococcus aureus A8819]
gi|297209453|ref|ZP_06925851.1| ribonuclease P [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297245898|ref|ZP_06929760.1| ribonuclease P [Staphylococcus aureus A8796]
gi|297589202|ref|ZP_06947843.1| ribonuclease P [Staphylococcus aureus subsp. aureus MN8]
gi|300911477|ref|ZP_07128926.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH70]
gi|304379947|ref|ZP_07362676.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|59800193|sp|P0A0H4|RNPA_STAAW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59800194|sp|P0A0H5|RNPA_STAAU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122538495|sp|Q2FUQ1|RNPA_STAA8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123484178|sp|Q2FDE7|RNPA_STAA3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043747|sp|A6U596|RNPA_STAA2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043748|sp|A5IWD8|RNPA_STAA9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043749|sp|A8YYS2|RNPA_STAAT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|11514257|pdb|1D6T|A Chain A, Rnase P Protein From Staphylococcus Aureus
gi|7381167|gb|AAF61418.1|AF135268_1 ribonuclease P protein component [Staphylococcus aureus]
gi|87127496|gb|ABD22010.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204226|gb|ABD32036.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147742213|gb|ABQ50511.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus JH9]
gi|149947678|gb|ABR53614.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus JH1]
gi|160369731|gb|ABX30702.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253725878|gb|EES94607.1| ribonuclease P [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728143|gb|EES96872.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH130]
gi|257273213|gb|EEV05315.1| ribonuclease P [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276503|gb|EEV07954.1| ribonuclease P [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279989|gb|EEV10576.1| ribonuclease P [Staphylococcus aureus subsp. aureus 68-397]
gi|257283034|gb|EEV13166.1| ribonuclease P [Staphylococcus aureus subsp. aureus E1410]
gi|257285712|gb|EEV15828.1| ribonuclease P [Staphylococcus aureus subsp. aureus M876]
gi|257787509|gb|EEV25849.1| ribonuclease P [Staphylococcus aureus A9781]
gi|257840042|gb|EEV64507.1| ribonuclease P [Staphylococcus aureus A9763]
gi|257843129|gb|EEV67544.1| ribonuclease P [Staphylococcus aureus A9719]
gi|257846568|gb|EEV70590.1| ribonuclease P [Staphylococcus aureus A9635]
gi|257848137|gb|EEV72129.1| ribonuclease P protein component [Staphylococcus aureus A9299]
gi|257850850|gb|EEV74794.1| ribonuclease P protein component [Staphylococcus aureus A8115]
gi|257855044|gb|EEV77987.1| ribonuclease P protein component [Staphylococcus aureus A6300]
gi|257857556|gb|EEV80451.1| ribonuclease P protein component [Staphylococcus aureus A6224]
gi|257860898|gb|EEV83715.1| ribonuclease P protein component [Staphylococcus aureus A5948]
gi|257863493|gb|EEV86253.1| ribonuclease P protein component [Staphylococcus aureus A5937]
gi|262076640|gb|ACY12613.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ED98]
gi|269942299|emb|CBI50714.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus TW20]
gi|282314762|gb|EFB45148.1| ribonuclease P [Staphylococcus aureus subsp. aureus C101]
gi|282315704|gb|EFB46088.1| ribonuclease P [Staphylococcus aureus subsp. aureus C427]
gi|282323013|gb|EFB53332.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M899]
gi|282323969|gb|EFB54285.1| ribonuclease P [Staphylococcus aureus subsp. aureus WBG10049]
gi|282326091|gb|EFB56396.1| ribonuclease P [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282329945|gb|EFB59466.1| ribonuclease P [Staphylococcus aureus subsp. aureus Btn1260]
gi|282590509|gb|EFB95587.1| ribonuclease P [Staphylococcus aureus A10102]
gi|282594126|gb|EFB99114.1| ribonuclease P [Staphylococcus aureus A9765]
gi|282597089|gb|EFC02048.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus C160]
gi|282763323|gb|EFC03453.1| ribonuclease P [Staphylococcus aureus A8117]
gi|283461668|gb|EFC08752.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus H19]
gi|283471927|emb|CAQ51138.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ST398]
gi|283789075|gb|EFC27902.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919212|gb|EFD96288.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus M1015]
gi|291096897|gb|EFE27155.1| ribonuclease P [Staphylococcus aureus subsp. aureus 58-424]
gi|291465514|gb|EFF08046.1| ribonuclease P [Staphylococcus aureus subsp. aureus M809]
gi|294823375|gb|EFG39804.1| ribonuclease P [Staphylococcus aureus A9754]
gi|294968328|gb|EFG44353.1| ribonuclease P [Staphylococcus aureus A8819]
gi|296885914|gb|EFH24849.1| ribonuclease P [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297177263|gb|EFH36516.1| ribonuclease P [Staphylococcus aureus A8796]
gi|297577713|gb|EFH96426.1| ribonuclease P [Staphylococcus aureus subsp. aureus MN8]
gi|300887656|gb|EFK82852.1| ribonuclease P [Staphylococcus aureus subsp. aureus TCH70]
gi|302752590|gb|ADL66767.1| ribonuclease P [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304341527|gb|EFM07437.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312436860|gb|ADQ75931.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus TCH60]
gi|320141416|gb|EFW33259.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144399|gb|EFW36164.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731746|gb|EGG68106.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus 21189]
gi|329732458|gb|EGG68808.1| ribonuclease P protein component [Staphylococcus aureus subsp.
aureus 21193]
Length = 117
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|282848768|ref|ZP_06258163.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294794205|ref|ZP_06759341.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
gi|282581554|gb|EFB86942.1| ribonuclease P protein component [Veillonella parvula ATCC 17745]
gi|294454535|gb|EFG22908.1| ribonuclease P protein component [Veillonella sp. 3_1_44]
Length = 119
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 5 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRM-PVAKQPTRIGFVTGKKVGCAVERNRA 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + +++ + +R++K
Sbjct: 64 RRLMKEVYRLNQHAI-REGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 112
>gi|290968156|ref|ZP_06559701.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
gi|290781831|gb|EFD94414.1| ribonuclease P protein component [Megasphaera genomosp. type_1 str.
28L]
Length = 118
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L+K +++ LV + G+ + L V+ + S R+GF KK GCAVERNR
Sbjct: 4 LTKDSRLRKNKEYRLVYRYGKSYVNRYVVLYVMARS-SKQCTRMGFVTGKKIGCAVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RR +KE RL + + G D VLI + I F + + ++ +R
Sbjct: 63 CRRLMKEVYRLHRQELG-SGFDLVLIGRSPLKNINFAQAEYYILKVLR 109
>gi|133184|sp|P25817|RNPA_STRBI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|153427|gb|AAA26808.1| rnpA [Streptomyces bikiniensis]
Length = 123
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ V + G V+ A A +L ++R
Sbjct: 62 GAVVRNQVKRRLRHLVCDRLSAL-PPGSLVVVRALPGAGDADHAQLARDLDAALQRL 117
>gi|260432497|ref|ZP_05786468.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416325|gb|EEX09584.1| ribonuclease P protein component [Silicibacter lacuscaerulensis
ITI-1157]
Length = 90
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 27 FSLEVLNN-NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
++ + RVGFT +KK G AV RNR +RRL+EA R + G DYVLI
Sbjct: 1 MMVQARKRAPDEAEGIRVGFTCSKKVGNAVARNRAKRRLREAARAVLPDHGQDGWDYVLI 60
Query: 86 AKRDALFI-PFKELCNHFVERVRRNKRSYY 114
+ + PF L + + +R+
Sbjct: 61 GRAEVTAARPFDALLDDLRQALRKIHSPRK 90
>gi|58584260|ref|YP_203276.1| ribonuclease P [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58428854|gb|AAW77891.1| ribonuclease P, protein component [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 159
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 25 PRSARVRTRAQYTVVFDNARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 83 KRVLRDAMRHLLPEL--PGGDYVIVARSAAAKATNPQIRDAFLRLLRRA 129
>gi|82752291|ref|YP_418032.1| ribonuclease P [Staphylococcus aureus RF122]
gi|123549491|sp|Q2YZB7|RNPA_STAAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|82657822|emb|CAI82277.1| ribonuclease P protein component [Staphylococcus aureus RF122]
Length = 117
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHVLKIAK 110
>gi|16330834|ref|NP_441562.1| ribonuclease P [Synechocystis sp. PCC 6803]
gi|2500595|sp|Q55005|RNPA_SYNY3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1491766|emb|CAA57516.1| rnpA [Synechocystis sp. PCC 6803]
gi|1653327|dbj|BAA18242.1| protein subunit of ribonuclease P [Synechocystis sp. PCC 6803]
Length = 124
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERN 58
+ LK + F V + G+ + + VL + ++ R G TV+ K A RN
Sbjct: 3 LPKTLRLKHWQDFQTVYQQGKRHRHSNLLMRVLGDRQAD-HSRFGITVSQKVSKKATVRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R++R+++ + + K G D V+I + ++ +
Sbjct: 62 RLKRQIRAVINHFQPQI-KPGFDVVIIVLPQGIGCNYERFLRELEQLF 108
>gi|254488787|ref|ZP_05101992.1| ribonuclease P protein component [Roseobacter sp. GAI101]
gi|214045656|gb|EEB86294.1| ribonuclease P protein component [Roseobacter sp. GAI101]
Length = 95
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 23 KGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
P F L++ RVGFT +KK G AV RNR +RRL+E RL G D
Sbjct: 2 AMPGFILQMRKRAEGEADGIRVGFTCSKKVGNAVARNRAKRRLREVARLALPDQGVDGMD 61
Query: 82 YVLIAKRD-ALFIPFKELCNHFVERVRRNKRSYY 114
YVL+ ++ +PF +L + F + +
Sbjct: 62 YVLVGRQGSTAILPFCQLQDDFAKALGILHGKLR 95
>gi|320009748|gb|ADW04598.1| ribonuclease P protein component [Streptomyces flavogriseus ATCC
33331]
Length = 123
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA+ + R G + L + S PR GF V+K G
Sbjct: 2 LPTENRLRRREDFAVAVRRGRRAGRPLLVVHLRSGATDPHVTGESAPPPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R ++RRL+ VR +L G V+ A + +L ++R
Sbjct: 62 GAVVRTAVKRRLRHLVRDRLA-LLPPGSLVVVRALPGSGDADHAQLAQDLDAALQRL 117
>gi|262281560|ref|ZP_06059339.1| ribonuclease P protein component [Acinetobacter calcoaceticus
RUH2202]
gi|262257019|gb|EEY75758.1| ribonuclease P protein component [Acinetobacter calcoaceticus
RUH2202]
Length = 131
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 VRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRL 70
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 71 ARESFRLHQPNFG-SDIDIVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|227485755|ref|ZP_03916071.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
gi|227236310|gb|EEI86325.1| ribonuclease P [Anaerococcus lactolyticus ATCC 51172]
Length = 116
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M LKK + F V K + VL +N PR GFT++KK G A RN++
Sbjct: 1 MEKRLSLKKDKDFKKVYK-KNFACYNRDFTVLVRDNDLKNPRFGFTISKKIGKAHSRNQL 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R+L+E R+ + +G D V+I K+ ++ L + + + R
Sbjct: 60 KRKLREIARINYANL--NGVDIVIIPKKHTTEFDYQRLKSSLGHALNQAFRKKK 111
>gi|254463010|ref|ZP_05076426.1| ribonuclease P protein component [Rhodobacterales bacterium
HTCC2083]
gi|206679599|gb|EDZ44086.1| ribonuclease P protein component [Rhodobacteraceae bacterium
HTCC2083]
Length = 88
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+++ + ++ + VGFT +KK G AV RNR +RRL+EA R+ G DYVLI
Sbjct: 1 MMVQMRDRHDEDPNVGVGFTCSKKVGNAVARNRAKRRLREAARVVLPLHGVIGCDYVLIG 60
Query: 87 KRDA-LFIPFKELCNHFVERVRRNKRSY 113
+ +A PF L + +++ S
Sbjct: 61 RAEATANRPFDLLVSDLRYALKKLHASK 88
>gi|294853975|ref|ZP_06794647.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
gi|294819630|gb|EFG36630.1| ribonuclease P protein component [Brucella sp. NVSL 07-0026]
Length = 123
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F +EV PRVGFTVTKK G AV RNR+RRRLKEA+R
Sbjct: 2 RNGEKRRGPLFLMEVRERTEEESNAAKTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
A + DYV++A+ AL PF +L R+ GK + +
Sbjct: 62 CHAGRDMAPSTDYVIVAREQALNAPFSQLTEELSRRITAKGERRSGGKRRTER 114
>gi|238855504|ref|ZP_04645809.1| ribonuclease P protein component [Lactobacillus jensenii 269-3]
gi|260665208|ref|ZP_05866057.1| ribonuclease P protein component [Lactobacillus jensenii SJ-7A-US]
gi|282931530|ref|ZP_06337029.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|313472763|ref|ZP_07813251.1| ribonuclease P protein component [Lactobacillus jensenii 1153]
gi|238831870|gb|EEQ24202.1| ribonuclease P protein component [Lactobacillus jensenii 269-3]
gi|239529256|gb|EEQ68257.1| ribonuclease P protein component [Lactobacillus jensenii 1153]
gi|260560945|gb|EEX26920.1| ribonuclease P protein component [Lactobacillus jensenii SJ-7A-US]
gi|281304337|gb|EFA96440.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
Length = 122
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V KG+ F + L + RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFQTVFNKGDSVANRAFVVYKLIRPENKHF-RVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + V D+++I + A E+ + + + K
Sbjct: 60 RLKRYIRATLTEVKDEVDARA-DFLVITRPYAREFTMAEVKKNLLHAMTLAK 110
>gi|282918067|ref|ZP_06325817.1| ribonuclease P [Staphylococcus aureus subsp. aureus D139]
gi|282318352|gb|EFB48712.1| ribonuclease P [Staphylococcus aureus subsp. aureus D139]
Length = 117
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +KK F + KG F + NN R+G +V+KK G AV RN+
Sbjct: 3 LEKAYRIKKNADFQRIYKKGHSVANRQFVVYTC-NNKEIDHFRLGISVSKKLGNAVLRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E ++ +L D ++IA++ A + ++ N ++ K
Sbjct: 62 IKRAIRENFKVHKSHILAK--DIIVIARQPAKDMTTLQIQNSLEHILKIAK 110
>gi|296271543|ref|YP_003654175.1| ribonuclease P protein component [Thermobispora bispora DSM 43833]
gi|296094330|gb|ADG90282.1| ribonuclease P protein component [Thermobispora bispora DSM 43833]
Length = 124
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + +++ F ++KG P L +++ P VGF V K G AV RNR
Sbjct: 2 LPSASRMRRGADFADAIRKGRRVGSPTLVLHFRRR-DTDAPPLVGFIVGKTVGRAVVRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+ +R L G V+ A A + + L +
Sbjct: 61 VKRRLRHLMRDRL-QCLPRGSLLVVRANPPAASMRSERLAAELDVALE 107
>gi|170749904|ref|YP_001756164.1| ribonuclease P protein component [Methylobacterium radiotolerans
JCM 2831]
gi|170656426|gb|ACB25481.1| ribonuclease P protein component [Methylobacterium radiotolerans
JCM 2831]
Length = 206
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLE-VLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ I LKKR F +G + + L N ++ R+GFT+TK+ G A ERNR
Sbjct: 1 MATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNR 60
Query: 60 MRRRLKE----AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+RRRL+ + D VLIA+R AL F+ L + R +
Sbjct: 61 IRRRLRAALSVVASDLPGELAGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAA 120
Query: 116 G 116
Sbjct: 121 R 121
>gi|219684026|ref|YP_002470409.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis AD011]
gi|241191632|ref|YP_002969026.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241197037|ref|YP_002970592.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|254808046|sp|B8DV04|RNPA_BIFA0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219621676|gb|ACL29833.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis AD011]
gi|240250024|gb|ACS46964.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251591|gb|ACS48530.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289177768|gb|ADC85014.1| Ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis BB-12]
gi|295794624|gb|ADG34159.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis V9]
Length = 118
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP------RVGFTVTKKQGCAVER 57
+ LK R+F V K R + + R+G V+K G AV R
Sbjct: 1 MERLKNHREFVAVLKRRRRVSDADIVLHYVVRTPSTPTGAAPARRLGLAVSKSVGNAVVR 60
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
N ++RR + + D VL AK A F+ L R R
Sbjct: 61 NTVKRRFRVLAHRYEHEL-PADCDIVLRAKPGAAHASFQSLEAQIQALFRAVMRKSEQS 118
>gi|218134373|ref|ZP_03463177.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
gi|217989758|gb|EEC55769.1| hypothetical protein BACPEC_02267 [Bacteroides pectinophilus ATCC
43243]
Length = 114
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
N LK F V + + +L N R+G +V+KK G ++ R+R+
Sbjct: 4 KNFETLKSNTDFNRVYAAKRSYANRLLVVYILENGTDAN--RLGVSVSKKVGNSIVRHRL 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
R ++E+ RL A+ V+ G D +++A+ + E
Sbjct: 62 ARLIRESYRLHADEVMT-GFDIIVVARTGLKNKDYFE 97
>gi|317496614|ref|ZP_07954961.1| ribonuclease P [Gemella moribillum M424]
gi|316913279|gb|EFV34778.1| ribonuclease P [Gemella moribillum M424]
Length = 116
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K+ + F + +K + F + N R+G +V+KK G A ERN+
Sbjct: 1 MKKEYRIKRSQDFDNIIRKKQSFANRQFVIYYQKNKLE--YMRLGISVSKKLGKAHERNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R ++E + +D ++IA+ +PF E+ + ++++K
Sbjct: 59 IKRYIRETFKT--RKNHIKNYDIIIIARAGVKELPFLEVGSSIDHVLKKSK 107
>gi|315925609|ref|ZP_07921819.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621150|gb|EFV01121.1| ribonuclease P protein component [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 114
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
+ LK + F V KG+ F L N + R+G V+KK AV RN++R
Sbjct: 3 LNSLKSEKDFNDVFRKGQRFGNRHFQFYYLKNRENTN--RLGIIVSKKVSKRAVVRNKIR 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR++EA RL K G+D ++IAK + + E+ + + K
Sbjct: 61 RRIREAYRLHRGD-FKTGYDLIIIAKERCVSATYAEIEHSLTHLFYKTK 108
>gi|315039283|ref|YP_004032851.1| ribonuclease P [Lactobacillus amylovorus GRL 1112]
gi|325957757|ref|YP_004293169.1| ribonuclease P [Lactobacillus acidophilus 30SC]
gi|312277416|gb|ADQ60056.1| ribonuclease P [Lactobacillus amylovorus GRL 1112]
gi|325334322|gb|ADZ08230.1| ribonuclease P [Lactobacillus acidophilus 30SC]
gi|327184390|gb|AEA32837.1| ribonuclease P [Lactobacillus amylovorus GRL 1118]
Length = 122
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G+ F + V+ + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYVVEKPENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDE-EKLQINPNVDFLIITRPYARDFDIVKVRKNLLHALALAHIIEEMPDE 118
>gi|256383753|gb|ACU78323.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384584|gb|ACU79153.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455756|gb|ADH21991.1| ribonuclease P protein component [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 109
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F + + K F + +N + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTVKNFCFVIYY--KDNDQSYLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEIGSISKDVIILVRKSVLELKYATLSKSLIKLIKEIK 109
>gi|158336232|ref|YP_001517406.1| ribonuclease P protein component [Acaryochloris marina MBIC11017]
gi|158306473|gb|ABW28090.1| ribonuclease P protein component [Acaryochloris marina MBIC11017]
Length = 106
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN--NNSNLLPRVGFTVTKKQGC-AVE 56
+S LKK R+F++V KG+ + + L + N+ R+GF++++K AV
Sbjct: 2 LSTSHRLKKNREFSVVYRKGKRQSTKYLVLRTYRSGANSQKKPIRIGFSISQKVSKRAVV 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RNR++R+L+ A R + + G D V++ + A+ + + ++
Sbjct: 62 RNRIKRQLRAACRQLLPEL-QPGWDVVIVVRTAAVQCDYFLISDN 105
>gi|332995879|gb|AEF05934.1| ribonuclease P protein component [Alteromonas sp. SN2]
Length = 119
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFT-VTKKQGCAVERNR 59
S L F V P F++ L N+ PR+G T K+ A +RNR
Sbjct: 7 SRELRLLTPTHFTYVFDNAIPAVSPSFTI--LARTNTLPSPRLGITLAKKRIRKAHDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R ++E+ R + D ++I K A + +E+ + ++ + +
Sbjct: 65 LKRLIRESFRHKQHDL--PNVDIIVIGKSGADKLSNQEIFATMDKLWKKLAKRCNAS 119
>gi|239616664|ref|YP_002939986.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
gi|239505495|gb|ACR78982.1| ribonuclease P protein component [Kosmotoga olearia TBF 19.5.1]
Length = 134
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ L+K+ F V K F + VL N R+G +V KK G A +RNR+
Sbjct: 8 LTRNERLRKKADFDRVFKQGNVVQDNFFV-VLYVRNGLPFSRIGVSVKKKFGKAHDRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF------IPFKELCNHFVERVRRNKRSYY 114
RR +KE R L G+D ++IA+++ + L +H + +
Sbjct: 67 RRIVKEIFRKNKSAFL-PGYDILVIARKELSDSFKSGKADYHILSDHLLGLLSGIAEQEK 125
Query: 115 SGKNFS 120
+ KN S
Sbjct: 126 NEKNSS 131
>gi|92115432|ref|YP_575360.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
gi|122419004|sp|Q1QS97|RNPA_CHRSD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91798522|gb|ABE60661.1| ribonuclease P protein component [Chromohalobacter salexigens DSM
3043]
Length = 128
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L + V K L VL N+ PRVGF +KK AV+RNR+
Sbjct: 7 PRRQRLLTAGDYQHVFAHASFKVHGKGLLVLARPNALGYPRVGFVFSKKNVRRAVDRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + + D +++A+R + L RR ++ S
Sbjct: 67 KRLVRESFRLQSHRL--PAVDIIVLARRGVDALDNATLHRQLHGMWRRLEKDVRKQSVAS 124
Query: 121 RKS 123
S
Sbjct: 125 TPS 127
>gi|256398145|ref|YP_003119709.1| ribonuclease P protein [Catenulispora acidiphila DSM 44928]
gi|256364371|gb|ACU77868.1| ribonuclease P protein [Catenulispora acidiphila DSM 44928]
Length = 109
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR-----VGFTVTKKQGCAVERNRMR 61
+++ F +G R G + L + GF V+K G AV R ++
Sbjct: 1 MRRSADFGAAVRGGRRAGRTTLVAHLAVPSDPPPAADAAVLAGFVVSKAVGPAVVRTAVK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRL+ VR + + G V+ A A L +R+ R
Sbjct: 61 RRLRHLVRSRLDQL-PPGSRLVIRALPAAAEADSATLGADLDSALRKLLR 109
>gi|294630336|ref|ZP_06708896.1| ribonuclease P [Streptomyces sp. e14]
gi|292833669|gb|EFF92018.1| ribonuclease P [Streptomyces sp. e14]
Length = 123
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R +L G V+ A + +L ++R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRV-TLLPPGSLVVVRALPGSGDAEHAQLARDLDAALQRL 117
>gi|225873714|ref|YP_002755173.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
gi|225792901|gb|ACO32991.1| ribonuclease P protein component [Acidobacterium capsulatum ATCC
51196]
Length = 160
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQGCA 54
L+K + V ++ ++ P RVG T + G A
Sbjct: 5 REARLRKHADYQSVYAASRKQFSASMTYFCRVRPADAPPVLPSAAIPRVGLTAGRVMGKA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
VERNR++RR++EAVR +L D VL ++ + + F L E +
Sbjct: 65 VERNRIKRRMREAVREHL-QLLPGCVDVVLHPRKSVMTMEFTALSREVAEIFAKIAARIE 123
Query: 115 S 115
Sbjct: 124 R 124
>gi|303325517|ref|ZP_07355960.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
gi|302863433|gb|EFL86364.1| ribonuclease P protein component [Desulfovibrio sp. 3_1_syn3]
Length = 127
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+++R +F +G F L VL + R G V++K G AV RNR++R
Sbjct: 10 VRVRRRAEFTACYERGRRYHTEHFLLFVLPREHVGDCTRTGMAVSRKVGNAVVRNRVKRL 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKR 88
L+E RL +L D V +AKR
Sbjct: 70 LREFFRLH-SDLLPVHADLVAVAKR 93
>gi|13474028|ref|NP_105596.1| ribonuclease P [Mesorhizobium loti MAFF303099]
gi|22654079|sp|Q98D89|RNPA_RHILO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14024780|dbj|BAB51382.1| ribonuclease P, protein component [Mesorhizobium loti MAFF303099]
Length = 110
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F V++GE R+G FF +EVL+ + +PRVG+TVTKK G AV RNR+RRRLK
Sbjct: 7 RLLKRAEFLAVRRGEKRRGRFFLVEVLDRGDG-GVPRVGYTVTKKVGNAVVRNRVRRRLK 65
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
EAVR+ A + G+DYV++ + DAL PF +L R R
Sbjct: 66 EAVRVHAADDMVPGNDYVIVGRDDALRAPFGQLKAELSRRFR 107
>gi|148826354|ref|YP_001291107.1| ribonuclease P [Haemophilus influenzae PittEE]
gi|148716514|gb|ABQ98724.1| ribonuclease P [Haemophilus influenzae PittEE]
Length = 194
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 7 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 66 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIRLAQK 118
>gi|302393079|ref|YP_003828899.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
gi|302205156|gb|ADL13834.1| ribonuclease P protein component [Acetohalobium arabaticum DSM
5501]
Length = 117
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L K QF V G + +L R+GF+V+KK G AV RNR+
Sbjct: 9 PKSERLTKTHQFQQVYNHGYSIANNLIVMYMLKKKQKQR--RIGFSVSKKIGNAVVRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R LKE R ++ D VLI ++ ++E+ + + K
Sbjct: 67 KRILKEIYRRNKNKLIT-NIDLVLIGRKRISDSSYQEIKRAVFDLFEQAK 115
>gi|227889158|ref|ZP_04006963.1| ribonuclease P [Lactobacillus johnsonii ATCC 33200]
gi|227850387|gb|EEJ60473.1| ribonuclease P [Lactobacillus johnsonii ATCC 33200]
Length = 122
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATLTELKPEI-RPDLDFLVIARPYARDFDMGRTKKNLIHVLRLAKILSSKETE 118
Query: 119 FSRK 122
K
Sbjct: 119 IEEK 122
>gi|21222288|ref|NP_628067.1| ribonuclease P component [Streptomyces coelicolor A3(2)]
gi|1350816|sp|P48206|RNPA_STRCO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|456297|gb|AAA26732.1| RNase P protein [Streptomyces coelicolor A3(2)]
gi|4808377|emb|CAB42696.1| putative ribonuclease P component [Streptomyces coelicolor A3(2)]
Length = 123
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRVGRSTLVVHLRSGATDPHAPGESAPRTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R +L G V+ A A +L + R
Sbjct: 62 VAVVRNKVKRRLRHLMRDRI-DLLPPGSLVVVRALPGAGDADHAQLARDLDAALARL 117
>gi|295837759|ref|ZP_06824692.1| ribonuclease P protein component [Streptomyces sp. SPB74]
gi|197698915|gb|EDY45848.1| ribonuclease P protein component [Streptomyces sp. SPB74]
Length = 123
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL--------LPRVGFTVTKKQGCAVE 56
L++R F+ + R G + L + +++ R GF V+K G AV
Sbjct: 6 NRLRRREDFSTAVRRGRRAGRPLLVVHLKSGSTDPHAAGESTLPVRAGFVVSKAVGKAVV 65
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R ++R+L+ +R +L G V+ A A +L ++R
Sbjct: 66 RTSVKRKLRHLIRDRLS-LLPPGSLVVVRALPGAGDADHAQLARDLDAALKRL 117
>gi|303240055|ref|ZP_07326576.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
gi|302592324|gb|EFL62051.1| ribonuclease P protein component [Acetivibrio cellulolyticus CD2]
Length = 114
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK ++F + K G+ + L L+N + R+G T +KK G +V+RNR+RR +K
Sbjct: 7 IKKNKEFLKLYKKGKFYVAKYLVLYTLDNKSKVN--RLGITASKKFGGSVKRNRIRRLIK 64
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
E R EG L G D V +A+ F ++ +R+
Sbjct: 65 ECYR-HYEGQLNEGFDLVFVARSSEDMPSFSDIKREMKFLLRKL 107
>gi|256823859|ref|YP_003147822.1| ribonuclease P protein component [Kangiella koreensis DSM 16069]
gi|256797398|gb|ACV28054.1| ribonuclease P protein component [Kangiella koreensis DSM 16069]
Length = 128
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 6 ILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRR 62
L + V P ++L L N R+G V K AV+RNR++R
Sbjct: 20 RLLTAEDYKRVFNNNPLKIVCPPYTL--LAVPNLKDCSRIGLIVAKKNVRNAVDRNRIKR 77
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL + +D VL+A+ + +P K L H + R ++
Sbjct: 78 LARESFRLNQHQI--PTYDIVLLARCGSSQLPNKVLFGHLEQLWIRLQKRSSK 128
>gi|241895505|ref|ZP_04782801.1| ribonuclease P component protein [Weissella paramesenteroides ATCC
33313]
gi|241871251|gb|EER75002.1| ribonuclease P component protein [Weissella paramesenteroides ATCC
33313]
Length = 118
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
M +KK F LV + + R+G +++KK G ER
Sbjct: 1 MRKSYRVKKEADFQLVFEQHHSVANKMFIVYTMTREQPTHFRLGISISKKVGLRGHERVW 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RR++++V + + D ++IA+ A + + +
Sbjct: 61 VKRRIRQSVLEFKPKM-RSDLDILVIARPSAHDQDMAIIKKNLEHVFK 107
>gi|109900612|ref|YP_663867.1| ribonuclease P protein component [Pseudoalteromonas atlantica T6c]
gi|122971412|sp|Q15MS5|RNPA_PSEA6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|109702893|gb|ABG42813.1| ribonuclease P protein component [Pseudoalteromonas atlantica T6c]
Length = 120
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V K P +L L +N + PR+G TV K+ A +RNR
Sbjct: 7 SRELRLLTPTHFEFVFKNATPAVSPNLTL--LARHNDSPNPRLGITVAKKRVKKAHDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++E+ R + + D V++ K + +EL + ++ + +
Sbjct: 65 IKRIVRESFRNHQQSL--PNIDIVVVGKSGLDKLSNQELFLVLSKLWKKLAKRCEKSQ 120
>gi|283782564|ref|YP_003373318.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|297243218|ref|ZP_06927153.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
gi|283441622|gb|ADB14088.1| ribonuclease P protein component [Gardnerella vaginalis 409-05]
gi|296888752|gb|EFH27489.1| ribonuclease P protein component [Gardnerella vaginalis AMD]
Length = 135
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL AK A
Sbjct: 38 FLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLR-VIAKNYESLLPAGCDVVLRAKPSA 96
Query: 91 LFIPFKELCNHFVERVRRN 109
F L + +
Sbjct: 97 AQSSFDSLQCQIQKLFGKI 115
>gi|119026648|ref|YP_910493.1| ribonuclease P protein component [Bifidobacterium adolescentis ATCC
15703]
gi|154486343|ref|ZP_02027750.1| hypothetical protein BIFADO_00152 [Bifidobacterium adolescentis
L2-32]
gi|166226702|sp|A1A3X8|RNPA_BIFAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118766232|dbj|BAF40411.1| ribonuclease P protein component [Bifidobacterium adolescentis ATCC
15703]
gi|154084206|gb|EDN83251.1| hypothetical protein BIFADO_00152 [Bifidobacterium adolescentis
L2-32]
Length = 121
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGP-FFSLEVLNNNN-------SNLLPRVGFTVTKKQGCAV 55
+ LK R F V K R + L +++ + RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYLMHDDVVTGDTATVQGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RN ++RR + R E +L D VL AK A F L KR S
Sbjct: 61 TRNAVKRRFRVLARK-YESLLPESCDIVLRAKPSAARADFLSLEQQMASCFEAVKRKTAS 119
Query: 116 GK 117
+
Sbjct: 120 RQ 121
>gi|323143416|ref|ZP_08078101.1| ribonuclease P protein component [Succinatimonas hippei YIT 12066]
gi|322416821|gb|EFY07470.1| ribonuclease P protein component [Succinatimonas hippei YIT 12066]
Length = 121
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L R F V K +R L VL NN+ PR+G ++KK AV RNR+
Sbjct: 7 PRELRLLNSRDFDQVFKNPVRASAQGML-VLAKNNNLDKPRLGLVISKKVLKRAVWRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++E R + + D V IA+ I EL + R + ++
Sbjct: 66 KRIVRETFRNSQDNL--PKADLVFIARPKIGDISNSELSSTLQRLWNHVSRRLDNPQS 121
>gi|227500988|ref|ZP_03931037.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
gi|227216761|gb|EEI82159.1| ribonuclease P [Anaerococcus tetradius ATCC 35098]
Length = 116
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ V NN PR GF+++KK G A RN
Sbjct: 1 MEKRISLRKDADFQRVYKRNQAFYNRDFTVLV--KNNGQKHPRFGFSISKKIGKANVRNS 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L++ +R+ + + D V+I K+ + + +L + + +
Sbjct: 59 LKRKLRDIIRINYGSI--NAVDVVIIPKKHTIDFTYDDLKKSLGHVLSKAFKKK 110
>gi|313904723|ref|ZP_07838097.1| ribonuclease P protein component [Eubacterium cellulosolvens 6]
gi|313470516|gb|EFR65844.1| ribonuclease P protein component [Eubacterium cellulosolvens 6]
Length = 114
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M LKK F V + G + + V N R+G +V+KK G +V R+
Sbjct: 1 MKFSESLKKNSDFQQVYRRGTSNANKYLVMYVKENRLERN--RIGISVSKKVGNSVVRHH 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ R ++EA RL E G D V+I + + K++ +
Sbjct: 59 LTRLVREAYRL-KEDCFCKGLDVVVICRVSSKDCTQKQIADALYHL 103
>gi|162147921|ref|YP_001602382.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|209542538|ref|YP_002274767.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|226741389|sp|A9HKS8|RNPA_GLUDA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161786498|emb|CAP56080.1| Ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530215|gb|ACI50152.1| ribonuclease P protein component [Gluconacetobacter diazotrophicus
PAl 5]
Length = 116
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 3 NICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LKKR +F V +G P L+ L ++S+ R+GFTVTKK G AV RNR R
Sbjct: 4 RAHRLKKRAEFLKVASRGRKVPSPGLVLQALGRDDSD-PARIGFTVTKKVGNAVVRNRTR 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRL+EAVR+ +G D VLI + F L +R+
Sbjct: 63 RRLREAVRVVEREEPLNGVDLVLIGRDGTRGRTFAALVGDLRRTLRKA 110
>gi|86747810|ref|YP_484306.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
gi|86570838|gb|ABD05395.1| ribonuclease P protein component [Rhodopseudomonas palustris HaA2]
Length = 113
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G GP F L+ ++ RVGFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFLAVANGRRISGPAFVLQGRRRDDP-GPVRVGFTVTKKIGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
E V+ G++ DYVL+ +R AL F + + R R
Sbjct: 62 ELVKRADRGLMLPNSDYVLVGRRAALSRDFAVMLGDLRSALDRIARRSSKPD 113
>gi|311233303|gb|ADP86157.1| ribonuclease P protein component [Desulfovibrio vulgaris RCH1]
Length = 129
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ L +R +F G F L V+ + R+G VT+K G AV+RNR+
Sbjct: 7 THSHRLTRRPEFQACYGAGRRFFSKNFVLFVMERSADPEGWRLGLAVTRKTGTAVQRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+R L+E RL VL D + + KR
Sbjct: 67 KRVLREFFRLHQH-VLPDDADIIAVPKR 93
>gi|322437356|ref|YP_004219568.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
gi|321165083|gb|ADW70788.1| ribonuclease P protein component [Acidobacterium sp. MP5ACTX9]
Length = 128
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQGCAVERN 58
+ L+K + V + S PRVG TV K G AV+RN
Sbjct: 9 LLRLRKHADYQRVYTSSRKQFSKQMSFFFSIRPEGRRSDTPGPRVGLTVGKVLGKAVDRN 68
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R++RRL+E VR A+ + D +L +R L + L + R + +
Sbjct: 69 RIKRRLRECVRHHAQTLTHP-VDVILHPRRTVLELESGHLEREIAQIFRTIQTTLNKA 125
>gi|50086621|ref|YP_048131.1| RNase P C5 component [Acinetobacter sp. ADP1]
gi|60390406|sp|Q6F6K8|RNPA_ACIAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49532595|emb|CAG70309.1| RNase P, protein C5 component, processes tRNA, 4. 5S RNA
[Acinetobacter sp. ADP1]
Length = 131
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L+ + V G L K L + L R+G V KK A ERNR+
Sbjct: 8 STEVRLRCAADYQGVFDGALFKVHQPHFLFLAKPSEQLQSRLGVIVAKKKVRRAHERNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL + + D V++ K + +L ++ +R
Sbjct: 68 KRLARESFRLHQQQLGL--LDIVVMPKIGIEAVSNADLHQQLEFAWQKLQRQAKK 120
>gi|226952828|ref|ZP_03823292.1| ribonuclease P [Acinetobacter sp. ATCC 27244]
gi|226836449|gb|EEH68832.1| ribonuclease P [Acinetobacter sp. ATCC 27244]
Length = 132
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 12 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRVKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I +EL ++ +R
Sbjct: 72 RESFRLHQAQ-FNADIDIVVMPKVGIDTISNQELHQQLDFAWQKLQRLAKK 121
>gi|323700639|ref|ZP_08112551.1| ribonuclease P protein component [Desulfovibrio sp. ND132]
gi|323460571|gb|EGB16436.1| ribonuclease P protein component [Desulfovibrio desulfuricans
ND132]
Length = 123
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L + +F +G+ F L +L ++ R+G TV+KK G AV RNR++
Sbjct: 8 KERRLLRSPEFKACYEQGKKHFTRSFILFILKRSSPGPGIRLGLTVSKKMGHAVARNRIK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERVRRNK 110
R ++E RL D V++ KR +A + F + R +
Sbjct: 68 RVVREYFRLHQFDFDLP-LDVVVVPKRNLEAKQLTLALATEEFTPLLSRLR 117
>gi|298253032|ref|ZP_06976824.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
gi|297532427|gb|EFH71313.1| ribonuclease P protein component [Gardnerella vaginalis 5-1]
Length = 135
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L++ + R+G V+K G AV RN+++RRL+ + E +L G D VL AK A
Sbjct: 38 FLHDQKFEHVKRLGLAVSKSVGKAVVRNKVKRRLR-VIAKNYESLLPAGCDVVLRAKPSA 96
Query: 91 LFIPFKELCNHFVERVRRN 109
F L + +
Sbjct: 97 AQSSFDSLQCQIQKLFGKI 115
>gi|119510153|ref|ZP_01629292.1| ribonuclease P [Nodularia spumigena CCY9414]
gi|119465214|gb|EAW46112.1| ribonuclease P [Nodularia spumigena CCY9414]
Length = 134
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 18/127 (14%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL-------------PRVGFT 46
+ LK R+ F V + G R F+L L + S + G +
Sbjct: 3 LPKANRLKSRKDFQAVFREGIRRHSSHFTLRALRPSGSKAPSLDTATSQKPLSSTQFGVS 62
Query: 47 VT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKELCNHFV 103
++ K AV RNR++R++ A+ + G V++ K A ++
Sbjct: 63 ISTKVSKRAVIRNRIKRQITAALHDLLPNLS-PGWRVVIVVKPTAAESKCVSQQFLQELE 121
Query: 104 ERVRRNK 110
+ + + +
Sbjct: 122 QLLVKAE 128
>gi|331703941|ref|YP_004400628.1| ribonuclease P protein component [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328802496|emb|CBW54651.1| Ribonuclease P protein component [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 109
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F + + K F + +N + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTVKNFCFVIYY--KDNDQSYLKYGISVGKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R V D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEVGTISKDVIILVRKSVLELKYATLSKSLIKLIKEIK 109
>gi|313885571|ref|ZP_07819321.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619301|gb|EFR30740.1| ribonuclease P protein component [Eremococcus coleocola
ACS-139-V-Col8]
Length = 128
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 13 FALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLC 71
F V G+ L RVG +V KK G AVERN+++R L++A+
Sbjct: 15 FQEVFHHGQSIANRQLVLYTYAKP-GQSHFRVGLSVGKKMGNAVERNQIKRYLRQALHEL 73
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ + D +LIA++D E+ + +
Sbjct: 74 EPAI-QTDLDILLIARKDICGRSMAEVRKSMIHVMNLAH 111
>gi|300742658|ref|ZP_07072679.1| ribonuclease P protein component [Rothia dentocariosa M567]
gi|300381843|gb|EFJ78405.1| ribonuclease P protein component [Rothia dentocariosa M567]
Length = 127
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ QF+ + G + R+GF V+K G AV RNR++RRL+
Sbjct: 1 MRTSSQFSATFRSGTRSGRRNLVVYTAQKP--GNTTRIGFIVSKAVGNAVTRNRVKRRLR 58
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E G + A + ++EL + + + +
Sbjct: 59 ELAAATVSTY-PQGLYIAVRALPASAGANWEELRADYRGALESSLKKLDRQDQ 110
>gi|162448267|ref|YP_001621399.1| ribonuclease P [Acholeplasma laidlawii PG-8A]
gi|189043726|sp|A9NE63|RNPA_ACHLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|161986374|gb|ABX82023.1| ribonuclease P [Acholeplasma laidlawii PG-8A]
Length = 116
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +K + + LV K + +F + + + + ++ KK G AVERN+
Sbjct: 1 MKRVYSIKSKNELDLVFKEKKSVGNGYFVIYFI--PHETPHFKYAISIGKKFGNAVERNQ 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+RRL+ V + + +V++ + + +P+ + + + + + K +N
Sbjct: 59 AKRRLRYIV-SNYSNYINPKYRFVIVVRPQSNLLPYDLIKENITKLLIKAKLIEKEAQN 116
>gi|88607890|ref|YP_504920.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
gi|88598953|gb|ABD44423.1| ribonuclease P protein component [Anaplasma phagocytophilum HZ]
Length = 120
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLL----PRVGFTVTKKQGCAV 55
+ + LKKR++FA + G K L+ +++ S RVGFTV+KK G AV
Sbjct: 3 LKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGNAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RRL+ A + G Y+LI+ R + EL V +RR
Sbjct: 63 VRNRIKRRLRVAAQNVIAKNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRL 116
>gi|327482913|gb|AEA86223.1| ribonuclease P [Pseudomonas stutzeri DSM 4166]
Length = 104
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
P ++ +L N PR+G + KK +VERNR++R+++E R + G D V
Sbjct: 2 PGRNVLLLARENDLQHPRLGLVIGKKSVKLSVERNRIKRQIRETFRHHQLELA--GWDIV 59
Query: 84 LIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+IA++ + EL F + +R R+
Sbjct: 60 IIARKGLADLDNPELAKQFAKLWKRLSRNPAKTAAEP 96
>gi|319780383|ref|YP_004139859.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166271|gb|ADV09809.1| ribonuclease P protein component [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 117
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L KR +F V++GE R+G F +EVL+ + PRVG+TVTKK G AV RNR+RRRL+
Sbjct: 14 RLLKRAEFLAVRRGEKRRGRLFLVEVLDRGDGL-SPRVGYTVTKKVGNAVVRNRVRRRLR 72
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
EAVR A + G+DYV++ + D L PF +L R+R
Sbjct: 73 EAVRTHAASDMAPGNDYVIVGREDVLTTPFGQLKAELSRRLR 114
>gi|313893504|ref|ZP_07827074.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
gi|313441947|gb|EFR60369.1| ribonuclease P protein component [Veillonella sp. oral taxon 158
str. F0412]
Length = 121
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 7 LDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRM-PVAKQSMRIGFVTGKKVGCAVERNRA 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + +++ + +R++K
Sbjct: 66 RRLMKEVYRLNQHSI-REGYHIVIVGRGPLKNATYEKAEKEILYLLRKSK 114
>gi|294648706|ref|ZP_06726166.1| ribonuclease P [Acinetobacter haemolyticus ATCC 19194]
gi|292825381|gb|EFF84124.1| ribonuclease P [Acinetobacter haemolyticus ATCC 19194]
Length = 131
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRVKRLA 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I +EL ++ +R
Sbjct: 71 RESFRLHQAQ-FNADIDIVVMPKVGIDTISNQELHQQLDFAWQKLQRLAKK 120
>gi|282898268|ref|ZP_06306259.1| ribonuclease P protein [Raphidiopsis brookii D9]
gi|281196799|gb|EFA71704.1| ribonuclease P protein [Raphidiopsis brookii D9]
Length = 140
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNN-------------------NNSNLL 40
+ LK R F V + G F+L L +
Sbjct: 3 LPKAYRLKSRGDFQAVFREGVRCHSSHFTLRALKTLSPTQVALHPSSITTPANTCENLPN 62
Query: 41 PRVGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKE 97
++G +++ K AV RNR++R++ + + K G V+I K ++
Sbjct: 63 TKIGISISTKVSKRAVVRNRIKRQITGVLYQLLPKLSK-GWRLVVIVKPKTGEWECISQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLRELEQLLVKAE 134
>gi|332186232|ref|ZP_08387977.1| ribonuclease P protein component [Sphingomonas sp. S17]
gi|332013600|gb|EGI55660.1| ribonuclease P protein component [Sphingomonas sp. S17]
Length = 113
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGFTVTKK G AV RNRM+RR++ R G D+VLI ++ + ++ L
Sbjct: 2 RVGFTVTKKIGNAVVRNRMKRRMRALARDLLPTKGITGADHVLIGRQGGIERDYQALTAE 61
Query: 102 FVERVRRNKRSYYSGKNFSRK 122
+ + R + R+
Sbjct: 62 LAKALARAASPETAADQRPRE 82
>gi|238810222|dbj|BAH70012.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 114
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K +F V K + + + + N++ ++G TV KK AV RN
Sbjct: 5 MKKIYRLQKSWEFDAVIKFQKQVLNKYMIIYYMPNDD----FKIGITVPKKFCNAVLRNY 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+LK + + +VLI ++D L + +++ + + K
Sbjct: 61 YKRQLKSIIHSL--NLYGEKMHFVLIPRKDFLNLIYEDKLTITKKLFEKIKNGKQK 114
>gi|269122723|ref|YP_003310900.1| ribonuclease P protein component [Sebaldella termitidis ATCC 33386]
gi|268616601|gb|ACZ10969.1| ribonuclease P protein component [Sebaldella termitidis ATCC 33386]
Length = 107
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK ++F+ V KG+ + + + LNNN + R GF +KK G AV+RNR++R
Sbjct: 1 MITLKKEKEFSKVYQKGQKKHTKYVIIIFLNNNLNEK--RFGFVASKKTGNAVKRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRR 108
+E VRL K +DY++I K + + + + ++ + +
Sbjct: 59 LFREVVRLNYNK-FKENYDYIIIGKAVLKDNIDSLKYDTMEKDILKGIIK 107
>gi|257792848|ref|YP_003183454.1| ribonuclease P protein component [Eggerthella lenta DSM 2243]
gi|257476745|gb|ACV57065.1| ribonuclease P protein component [Eggerthella lenta DSM 2243]
Length = 108
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R + + G+ P+ + VL RV F KK G AV RN +R
Sbjct: 1 METIKSRGDISDLFSCGKRLHTPYLTFIVLPTKQHGQQGRVAFIAGKKSGNAVWRNSAKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++ G+D + +AK + + ++ E ++R +
Sbjct: 61 RMRAICHDLGGPWA--GYDVIFLAKSGIMKSSYSKVHTACAETLKRAE 106
>gi|319777716|ref|YP_004137367.1| ribonuclease p protein component [Mycoplasma fermentans M64]
gi|318038791|gb|ADV34990.1| Ribonuclease P protein component [Mycoplasma fermentans M64]
Length = 110
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I L+K +F V K + + + + N++ ++G TV KK AV RN
Sbjct: 1 MKKIYRLQKSWEFDAVIKFQKQVLNKYMIIYYMPNDD----FKIGITVPKKFCNAVLRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+LK + + +VLI ++D L + +++ + + K
Sbjct: 57 YKRQLKSIIHSL--NLYGEKMHFVLIPRKDFLNLIYEDKLTITKKLFEKIKNGKQK 110
>gi|306821797|ref|ZP_07455392.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550164|gb|EFM38160.1| ribonuclease P protein component [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 108
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KK +QF + +G+ + + N++ ++G +++KK G AV RNR+RR +K
Sbjct: 6 IKKDKQFRYIYSRGKSFANKKLVVYYIKNSDEK--LKIGISISKKVGKAVVRNRLRRLIK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E +R +K G+ + +A+ A + F+ + + ++R
Sbjct: 64 ENIR--LSTNIKTGYSMIFLARVGADDLDFQTMRSSINHLLKR 104
>gi|299772123|ref|YP_003734149.1| ribonuclease P protein component [Acinetobacter sp. DR1]
gi|298702211|gb|ADI92776.1| ribonuclease P protein component [Acinetobacter sp. DR1]
Length = 130
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 10 VRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRL 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 70 ARESFRLHQPNFG-SDIDIVVMPKVGIEAITNAELYQQLDFAWQKLQRLAKK 120
>gi|304439082|ref|ZP_07399001.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372441|gb|EFM26028.1| ribonuclease P protein component [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 106
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R F V K + G L N N+ RVGF +TKK G AV RN+ +RRL+
Sbjct: 5 LKKDRDFQKVYKKKNVTGNRVFTMFL-NKNNLPTTRVGFVITKKFGNAVTRNKFKRRLRM 63
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R + LK G+D VLI K+D +I + EL F +R+
Sbjct: 64 ILR---DYDLKPGYDVVLILKKDKSYIDYSELKRSFEHVLRK 102
>gi|153008693|ref|YP_001369908.1| ribonuclease P [Ochrobactrum anthropi ATCC 49188]
gi|166226731|sp|A6WYM5|RNPA_OCHA4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|151560581|gb|ABS14079.1| ribonuclease P protein component [Ochrobactrum anthropi ATCC 49188]
Length = 141
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-------LPRVGFTVTKKQGCA 54
I L+KR +F ++ GE R+GP F LEV PR GFTVTKK G A
Sbjct: 5 KQILRLRKRAEFLALRNGEKRRGPLFLLEVRERTEEESQTAKIGEKPRAGFTVTKKNGNA 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V RNR+RRRL+EAVR A + DYV++A+ AL PF L R++
Sbjct: 65 VIRNRIRRRLREAVRCHAGRDMAPSTDYVIVAREQALTAPFSRLTEELSRRIKAKGERRG 124
Query: 115 SGKNFSRK 122
GK + +
Sbjct: 125 DGKRRTER 132
>gi|170077610|ref|YP_001734248.1| ribonuclease P [Synechococcus sp. PCC 7002]
gi|238689044|sp|B1XJD2|RNPA_SYNP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169885279|gb|ACA98992.1| ribonuclease P protein component [Synechococcus sp. PCC 7002]
Length = 116
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ LK R F + +G+ +G ++ +L ++G ++++K AV RN
Sbjct: 3 LPKEHRLKHWRDFKTIYSQGKRFRGDALAIILL--PQPAAPTKIGISISRKVSKKAVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RR++ A R + + G V+ + +A ++ +
Sbjct: 61 LIKRRIRHACRTLLPQI-QPGWHIVIAVRYNARECEYEHFLQELKRLL 107
>gi|218781969|ref|YP_002433287.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
gi|226736859|sp|B8FMU9|RNPA_DESAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218763353|gb|ACL05819.1| ribonuclease P protein component [Desulfatibacillum alkenivorans
AK-01]
Length = 118
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L+KR QF + ++G+ + +F + R+G TVTKK G AV RNR+
Sbjct: 7 TKEQRLRKRPQFLALGERGKRVQNAYFIAVFA--PAQGKVSRLGVTVTKKVGDAVTRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E RL + K D +IAK+ L R
Sbjct: 65 KRCVREYFRLNQHRL-KAPVDINVIAKKACCQQESPLLAASLDHLFNRV 112
>gi|297200937|ref|ZP_06918334.1| ribonuclease P [Streptomyces sviceus ATCC 29083]
gi|197716891|gb|EDY60925.1| ribonuclease P [Streptomyces sviceus ATCC 29083]
Length = 123
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVL-------NNNNSNLLPRVGFTVTKKQG 52
+ L++R FA + R G P + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPSLVVHFRSGATDPHAPGESAPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R + G V+ A +A ++L V+R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRV-LLFPPGSLVVVRALPEAGDADHEQLARDLDAAVQRL 117
>gi|262371175|ref|ZP_06064496.1| RNase P C5 component [Acinetobacter johnsonii SH046]
gi|262313905|gb|EEY94951.1| RNase P C5 component [Acinetobacter johnsonii SH046]
Length = 132
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 11 STEVRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPQSRLGIVVAKKKVRRAHERNRV 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R +E+ RL + + D V++ K +P EL ++ +R +
Sbjct: 71 KRLARESFRLHQQQLTL---DIVVMPKMGIETVPNAELHQQLQFAWQKLQRLAKKHQK 125
>gi|119471656|ref|ZP_01614041.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Alteromonadales bacterium TW-7]
gi|119445435|gb|EAW26722.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Alteromonadales bacterium TW-7]
Length = 141
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L ++ + P+F+L L N PR+G TV K+ A +RNR++R
Sbjct: 11 RLLTPSHYSRIFNEPARAATPYFTL--LAKPNDQEKPRLGLTVAKKRVKKACQRNRIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ RL + D VL+ K +EL + R+
Sbjct: 69 ARESFRLNQHNID--NIDIVLMVKNGIDEQSNEELTKQLTKLWRKINER 115
>gi|261346744|ref|ZP_05974388.1| ribonuclease P protein component [Providencia rustigianii DSM 4541]
gi|282565144|gb|EFB70679.1| ribonuclease P protein component [Providencia rustigianii DSM 4541]
Length = 119
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
+ L R F V K R + +L N PR+G T+ K A ERNR+
Sbjct: 7 TRELRLLTPRHFDNVFKQPQRASSP-EITILGRLNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E RL + D+V++ ++ + +++ + RR++R
Sbjct: 66 KRLAREYFRLHQHEL--PPMDFVVLVRKGVANLDNQQITESLDKLWRRHRRLAQKS 119
>gi|293611387|ref|ZP_06693683.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826259|gb|EFF84628.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 131
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 VRIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPKSRLGIVVAKKKVRRAHERNRIKRL 70
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 71 ARESFRLHQPNFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|89092262|ref|ZP_01165216.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
gi|89083350|gb|EAR62568.1| ribonuclease P protein component [Oceanospirillum sp. MED92]
Length = 123
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L R F V K P L +L N+ PR+GF ++KK AV+RNR+
Sbjct: 7 PRRLRLLTGRDFQFVFDDAQLKVPDQPLLILARPNNLGQPRLGFVISKKNVRQAVKRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
RR ++E+ RL + D +++A++ + + + + R K K
Sbjct: 67 RRIIRESFRLNQHSL--PSVDIIILARKGIGEMENEAIHKLMKKSWSRLKNKSKKLKQ 122
>gi|27364439|ref|NP_759967.1| ribonuclease P [Vibrio vulnificus CMCP6]
gi|37678188|ref|NP_932797.1| ribonuclease P [Vibrio vulnificus YJ016]
gi|29427709|sp|Q8DDI3|RNPA_VIBVU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397707|sp|Q7MQK4|RNPA_VIBVY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27360558|gb|AAO09494.1| ribonuclease P protein component [Vibrio vulnificus CMCP6]
gi|37196927|dbj|BAC92768.1| RNase P protein component [Vibrio vulnificus YJ016]
Length = 118
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ NN+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNNLSHPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +EL F + R R
Sbjct: 69 ARESFRNTQHQL--PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 117
>gi|308051503|ref|YP_003915069.1| ribonuclease P protein component [Ferrimonas balearica DSM 9799]
gi|307633693|gb|ADN77995.1| ribonuclease P protein component [Ferrimonas balearica DSM 9799]
Length = 119
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V P +L + N PR+G T+ K+ A +RNR
Sbjct: 7 SREQRLLTPGDFKPVFANPVRAASPQLTLLAV--PNELAHPRIGLTIAKKQVKKACQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R ++++ RL + D V+I K+ + L + R+ R
Sbjct: 65 IKRIVRDSFRLHQHDL--PAVDIVVIGKKGVELLDNAALHKLVDKLWRKLSRR 115
>gi|227834360|ref|YP_002836067.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
gi|262183093|ref|ZP_06042514.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
gi|254808062|sp|C3PL13|RNPA_CORA7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|227455376|gb|ACP34129.1| ribonuclease P protein component [Corynebacterium aurimucosum ATCC
700975]
Length = 122
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 10/116 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAV 55
+ L RQF KG R G + L N+ PR G V+K G AV
Sbjct: 2 LPAQHKLTSPRQFRRTIKGGRRAGTRTVVVHLRFNDGEDAIAATGPRFGLIVSKAVGNAV 61
Query: 56 ERNRMRRRLKEAVRLCAEG-----VLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R+R RRL+ +L D V+ A + + L + +
Sbjct: 62 VRHRTSRRLRHVCMSLMRDGVKGTMLPANVDIVIRALPASGEATSERLERDIRKAL 117
>gi|323357958|ref|YP_004224354.1| RNase P protein component [Microbacterium testaceum StLB037]
gi|323274329|dbj|BAJ74474.1| RNase P protein component [Microbacterium testaceum StLB037]
Length = 112
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L + + V++G G V + + R GF V+K+ G AV RN
Sbjct: 2 LAKPNRLTRGSDYKATVRRGSRCAGTHAVTYV-GGVDEDGPARFGFIVSKQVGSAVTRNT 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+RRRLK V + G V+ A + + L + + ++R
Sbjct: 61 VRRRLKAVCAEALPSV-RGGASVVIRALPSSATADYASLRSDVLRCLQR 108
>gi|282901450|ref|ZP_06309375.1| ribonuclease P protein [Cylindrospermopsis raciborskii CS-505]
gi|281193729|gb|EFA68701.1| ribonuclease P protein [Cylindrospermopsis raciborskii CS-505]
Length = 138
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 22/131 (16%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNN-----------------NNSNLLPR 42
+ LK R F V + G F+L L + +
Sbjct: 3 LPKAYRLKSRGDFQAVFREGVRCHSSHFTLRALKPLSPTHLHSSSINIPANTCENLPNTK 62
Query: 43 VGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKELC 99
+G +++ K AV RNR++R++ + + K G V+I K ++
Sbjct: 63 IGISISTKVSKRAVVRNRIKRQITGVLYQLLPKLSK-GWRLVVIVKPKTGEWECISQQFL 121
Query: 100 NHFVERVRRNK 110
+ + + +
Sbjct: 122 RELEQLLVKAE 132
>gi|242241429|ref|YP_002989610.1| ribonuclease P [Dickeya dadantii Ech703]
gi|242133486|gb|ACS87788.1| ribonuclease P protein component [Dickeya dadantii Ech703]
Length = 119
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L F+ V + R G + +L N+ PR+G T+ K A ERNR+
Sbjct: 7 PRELRLLTPSHFSFVFQQPQRAGAPQ-ITILGRLNTLGHPRIGLTIAKKHVRRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R +E+ RL + D+V+IAK+ + + L + RR++R ++
Sbjct: 66 KRLTRESFRLHQHEL--PAMDFVVIAKKGLSELDNRTLTEMLEKLWRRHRRLAHA 118
>gi|197300709|ref|ZP_03166178.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197291556|gb|EDY30908.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 129
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R +E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGSDS 121
>gi|317489241|ref|ZP_07947758.1| ribonuclease P protein component [Eggerthella sp. 1_3_56FAA]
gi|316911642|gb|EFV33234.1| ribonuclease P protein component [Eggerthella sp. 1_3_56FAA]
Length = 108
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R + + G+ P+ + VL RV F KK G AV RN +R
Sbjct: 1 METIKSRGDISDLFSCGKRLHTPYLTFIVLPTKQHGQQGRVAFIAGKKSGNAVWRNSAKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++ G+D + +AK + + ++ E ++R +
Sbjct: 61 RMRAICHELGGPWA--GYDVIFLAKSGIMRSSYSKVHTACAETLKRAE 106
>gi|297618526|ref|YP_003703685.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
gi|297146363|gb|ADI03120.1| ribonuclease P protein component [Syntrophothermus lipocalidus DSM
12680]
Length = 112
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + L+KR+ F V KG+ G + L V N R G +KK G AV RN+
Sbjct: 2 LKSDQRLRKRKDFEKVYSKGKKVFGRYLILYVGENAAGKN--RYGIVASKKVGKAVIRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RRR++E R + + G+D ++I K F + + + ++R+K
Sbjct: 60 SRRRVREVARTLDSKL-RQGYDVIVIVKPLCREADFASVKSDYERLLKRSK 109
>gi|62182328|ref|YP_218745.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62129961|gb|AAX67664.1| RNase P, protein component (protein C5), processes tRNA, 45S RNA
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 138
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGSDS 110
>gi|298490099|ref|YP_003720276.1| ribonuclease P protein component ['Nostoc azollae' 0708]
gi|298232017|gb|ADI63153.1| ribonuclease P protein component ['Nostoc azollae' 0708]
Length = 140
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN-------------------NNNSNLL 40
+ LK R F V + G F+L L + +
Sbjct: 3 LPKAYRLKSLRDFQAVFREGIRCHSSHFTLRALKPLGVKRPSMDAADVTTKPTSCENLAT 62
Query: 41 PRVGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKE 97
++G +++ K AV RNR++R++ + + ++ G V+I K A ++
Sbjct: 63 TKIGISISTKVSKRAVVRNRIKRQIAKDLYQLIPNLV-PGWRLVIIVKPKAAESECVSQQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAKAE 134
>gi|329938640|ref|ZP_08288036.1| ribonuclease P component [Streptomyces griseoaurantiacus M045]
gi|329302131|gb|EGG46023.1| ribonuclease P component [Streptomyces griseoaurantiacus M045]
Length = 123
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPLLVVHLRSGVTDPHATGESASPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R ++ G V+ A A +L + R
Sbjct: 62 GAVVRNKVKRRLRHLMRDRV-DLVPTGSLVVVRALPGAGEADHSQLARDLDAALGRL 117
>gi|42561575|ref|NP_976026.1| ribonuclease P (protein C5) [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|60390465|sp|Q6MRS3|RNPA_MYCMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|42493074|emb|CAE77668.1| Ribonuclease P (protein C5) [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301321248|gb|ADK69891.1| ribonuclease P protein component [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 109
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F + + K F + +N + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTIKNFCFIIYY--KDNDQSYLKYGISVGKKIGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ +R + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILRQNINEIGTISKDVIILVRKSVLKLKYATLSKSLIKLIKEIK 109
>gi|237786654|ref|YP_002907359.1| ribonuclease P protein component [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759566|gb|ACR18816.1| ribonuclease P protein component [Corynebacterium kroppenstedtii
DSM 44385]
Length = 137
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 10/132 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN------LLPRVGFTVTKKQGCA 54
+ L++R +F +G + V+ + P VG +K G +
Sbjct: 5 LPASQRLRRRSEFRAAIRGATSGSKLVVVHVVIRSTDPATADLINGPCVGVVCSKSVGNS 64
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN---KR 111
V R+ + R L+ + + + D V+ A+ A L + R
Sbjct: 65 VVRHTVARHLRHVAKNLVDDL-PRNVDLVIRARPAAANASHSALAEAVTYCTNKAYGKAR 123
Query: 112 SYYSGKNFSRKS 123
+ K +KS
Sbjct: 124 RREAKKAKDKKS 135
>gi|197294710|ref|YP_001799251.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
gi|226736871|sp|B1VAN7|RNPA_PHYAS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171854037|emb|CAM12010.1| Ribonuclease P protein component [Candidatus Phytoplasma
australiense]
Length = 115
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V + + R G + + N N + +V KK G A ERN +
Sbjct: 1 MKRKYILKKESEITAVFRSKKRCGNSSFIIYYSKQNVNTYFKFALSVGKKYGKAHERNLI 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RRL+ +R + + +V++ K A + F++L F + +
Sbjct: 61 KRRLRAIIRNYSSNL-NPAFFFVIVIKPPAKNLTFQQLKTTFAKFASKI 108
>gi|172036281|ref|YP_001802782.1| ribonuclease P [Cyanothece sp. ATCC 51142]
gi|171697735|gb|ACB50716.1| protein subunit of ribonuclease P [Cyanothece sp. ATCC 51142]
Length = 127
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSN---LLPRVGFTVT-KKQGCAV 55
+ L+ + F V +G+ + P + V + + G +V+ K AV
Sbjct: 3 LPKQHRLRHPKIFQTVYNRGKRYQSPHLVMRVFWQADQQDCTPPTQFGISVSQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RNR++R++K +RL + K G+ V++ KR+ ++ E +
Sbjct: 63 IRNRLKRQIKAVIRLFLPKI-KPGYQVVIVVKRNTTECKYEHFLRELEELL 112
>gi|127514793|ref|YP_001095990.1| ribonuclease P protein component [Shewanella loihica PV-4]
gi|126640088|gb|ABO25731.1| ribonuclease P protein component [Shewanella loihica PV-4]
Length = 120
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V K + +L N PR+G TV K+ A +RNR++R +
Sbjct: 13 RLLTPAQFKSVFSNP-IKASSAEITLLAIPNELQHPRIGLTVAKRYVKRANQRNRVKRII 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+++ RL + D V++ + L + L + R+ R
Sbjct: 72 RDSFRLHQHEL--PPLDIVVLVRNGVLEMDNAALHKQVEKLWRKLSRR 117
>gi|268320271|ref|YP_003293927.1| ribonuclease P protein component [Lactobacillus johnsonii FI9785]
gi|262398646|emb|CAX67660.1| ribonuclease P protein component [Lactobacillus johnsonii FI9785]
Length = 122
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L N RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKENQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + + D+++IA+ A + + +R K
Sbjct: 60 RLKRFIRATLTELKPEI-RSDLDFLVIARPYARDFDMGRTKKNLIHVLRLAK 110
>gi|229816223|ref|ZP_04446533.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
gi|229808231|gb|EEP44023.1| hypothetical protein COLINT_03273 [Collinsella intestinalis DSM
13280]
Length = 120
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K + F V +G+ P + + + + RV F K+ G AV RNR +R
Sbjct: 1 MQTIKSHQDFERVFTQGKRLNHPLIRMVICDCVSEGDPARVAFAAAKRLGNAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
L+EA R C + G + +L A +++ +RR
Sbjct: 61 VLREAARACC--LPVEGREIILFATPRTRTASPEDMQVALQSLLRRAH 106
>gi|308235531|ref|ZP_07666268.1| ribonuclease P protein component [Gardnerella vaginalis ATCC 14018]
Length = 145
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
+++ R+G V+K G AV RN+++RR + + +L +G D VL AK A
Sbjct: 38 KQPQKNDVALRLGLAVSKSVGKAVIRNKVKRRFRVIAKEHES-LLPYGCDVVLRAKPTAA 96
Query: 92 FIPFKELCNHFVERVRRNKRSYYSGKN 118
F L + + ++
Sbjct: 97 QSSFDSLNEQIKKIFGKIAKNLQDQNQ 123
>gi|118462642|ref|YP_884422.1| ribonuclease P [Mycobacterium avium 104]
gi|254777661|ref|ZP_05219177.1| ribonuclease P [Mycobacterium avium subsp. avium ATCC 25291]
gi|166226723|sp|A0QND4|RNPA_MYCA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118163929|gb|ABK64826.1| ribonuclease P protein component [Mycobacterium avium 104]
Length = 119
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
+ + + +F VK G P + + ++ + PRVG V K G AV+
Sbjct: 2 LPARNRMTRSTEFDATVKHGTRMAQPDIVVHLRRDSEPDDESAGPRVGLVVGKAVGTAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+R+ RRL+ R + V+ A + L +RR
Sbjct: 62 RHRVARRLRHVARALLGELEPSD-RLVIRALPGSRTASSARLAQELQRCLRRM 113
>gi|260887482|ref|ZP_05898745.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|330840120|ref|YP_004414700.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|260862769|gb|EEX77269.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
gi|329747884|gb|AEC01241.1| ribonuclease P protein component [Selenomonas sputigena ATCC 35185]
Length = 128
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ILKK++ F V +G+ F L V ++ +VGF KK G AV+RNR
Sbjct: 4 LPRSRILKKKKDFQAVYSRGKSYANRFLVLYVFRSHGLQG--KVGFAAGKKLGNAVKRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R L+E+ RL + + G +L+ ++ AL + ++L F+ R+ +
Sbjct: 62 VKRLLRESYRLHQVEI-EEGFSLLLVGRKAALDVKCQDLEKAFLALGRKAE 111
>gi|312897430|ref|ZP_07756854.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
gi|310621491|gb|EFQ05027.1| ribonuclease P protein component [Megasphaera micronuciformis
F0359]
Length = 117
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L K R++ LV + G+ L ++ + R GF KK GCAVERN
Sbjct: 4 LKKKDRLCKNREYQLVYRHGKSYVARSVVLYIMKRSP-QQPIRSGFVTGKKVGCAVERNY 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RR +KE RL ++ G+D VLI + + + + ++ +
Sbjct: 63 CRRLMKEVYRLHRSELI-SGYDLVLIGRSRMKYGTYADAEKTIMKLFK 109
>gi|322506196|gb|ADX01650.1| RNase P, RNase P C5 component [Acinetobacter baumannii 1656-2]
Length = 133
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 14 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 73
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 74 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 123
>gi|319789451|ref|YP_004151084.1| ribonuclease P protein component [Thermovibrio ammonificans HB-1]
gi|317113953|gb|ADU96443.1| ribonuclease P protein component [Thermovibrio ammonificans HB-1]
Length = 122
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ L+KRR F V G N+ K AVERNR +
Sbjct: 10 TKEERLRKRRDFERVFAHGKSLGGSTVAFYFLENDVGRPRAGFIASKKVSRKAVERNRAK 69
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R ++E RL + D V IA++ + F+++ F+ ++
Sbjct: 70 RLMREVFRLNKHRLGP--FDIVFIARKGIVGKRFQDVEADFLRLAKKA 115
>gi|327539969|gb|EGF26568.1| ribonuclease P protein component [Rhodopirellula baltica WH47]
Length = 146
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 2 SNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL------------LPRVGFTVT 48
+ + +F +++G + + L ++ + R+G T+
Sbjct: 13 PKSSRVVRSSEFTKALRRGGVAANDCLVVFALPHDVPDADGEPSPDKSKTVKCRLGVTIP 72
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KK G AV RNR +R ++EA RL + G DYV+ K+D +K + FV+ V R
Sbjct: 73 KKTGNAVVRNRWKRLIREAFRLNQSQL-PGGFDYVVRPKKDV-TADWKMIEKGFVKLVGR 130
Query: 109 NKRSYY 114
R
Sbjct: 131 AVRRSQ 136
>gi|54027646|ref|YP_121888.1| ribonuclease P [Nocardia farcinica IFM 10152]
gi|60390311|sp|Q5YMR7|RNPA_NOCFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54019154|dbj|BAD60524.1| putative RNase P component [Nocardia farcinica IFM 10152]
Length = 156
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 22/126 (17%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSN--------------------LLPRV 43
L R F+ V++G+ + + PR
Sbjct: 6 YRLHHRADFSRTVRRGQRIGRRDLVVHAFVHTYDELAHATERHGDPVAAGSFVRVGGPRF 65
Query: 44 GFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
G V+K G AV R+R+ RRL+ + V D V+ A A EL
Sbjct: 66 GLIVSKAVGSAVVRHRVARRLRHMCATLVDEV-PADADVVIRALPGAATADSAELARQVR 124
Query: 104 ERVRRN 109
+R+
Sbjct: 125 SGLRKL 130
>gi|300869000|ref|ZP_07113603.1| ribonuclease P [Oscillatoria sp. PCC 6506]
gi|300332980|emb|CBN58795.1| ribonuclease P [Oscillatoria sp. PCC 6506]
Length = 129
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNN------------SNLLPRVGFTVT-KK 50
L+++ F+ V KG R +L L ++N S +G +++ K
Sbjct: 6 NRLRRKEDFSAVYRKGIRRNSHHLTLRALRHSNKAELAQQQKDLKSLPATCIGISISLKV 65
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+V RNR++R+++ A+R + G + V++ + A + E + +
Sbjct: 66 SKRSVVRNRIKRQIRAALRQMLPRIS-PGWNLVIVVRPTAQECNYGEFLQELEQLL 120
>gi|227893840|ref|ZP_04011645.1| ribonuclease P [Lactobacillus ultunensis DSM 16047]
gi|227864329|gb|EEJ71750.1| ribonuclease P [Lactobacillus ultunensis DSM 16047]
Length = 122
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G+ F + V+ + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYVVEKAENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDE-EKLQINPHVDFLIITRPYARNFDMVKVRKNLLHALALAHIIEEMPDE 118
Query: 119 FSRK 122
K
Sbjct: 119 VEEK 122
>gi|116630437|ref|YP_819590.1| ribonuclease P [Lactobacillus gasseri ATCC 33323]
gi|238853337|ref|ZP_04643717.1| ribonuclease P protein component [Lactobacillus gasseri 202-4]
gi|282851874|ref|ZP_06261236.1| ribonuclease P protein component [Lactobacillus gasseri 224-1]
gi|300362681|ref|ZP_07058857.1| ribonuclease P [Lactobacillus gasseri JV-V03]
gi|311111577|ref|ZP_07712974.1| ribonuclease P protein component [Lactobacillus gasseri MV-22]
gi|122272626|sp|Q040F1|RNPA_LACGA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116096019|gb|ABJ61171.1| RNase P protein component [Lactobacillus gasseri ATCC 33323]
gi|238834025|gb|EEQ26282.1| ribonuclease P protein component [Lactobacillus gasseri 202-4]
gi|282556981|gb|EFB62581.1| ribonuclease P protein component [Lactobacillus gasseri 224-1]
gi|300353672|gb|EFJ69544.1| ribonuclease P [Lactobacillus gasseri JV-V03]
gi|311066731|gb|EFQ47071.1| ribonuclease P protein component [Lactobacillus gasseri MV-22]
Length = 122
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K R F V K G+ F + L RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKTERDFQKVFKEGQSMANRGFVVYTLPKEKQKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++IA+ A + + + +R K
Sbjct: 60 RLKRFIRATLTELKPEI-RSDLDFLVIARPYARDFDMERTKKNLIHVLRLAKVLSNEETE 118
Query: 119 FSRK 122
K
Sbjct: 119 TEEK 122
>gi|239993748|ref|ZP_04714272.1| ribonuclease P protein component [Alteromonas macleodii ATCC 27126]
Length = 124
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFT-VTKKQGCAVERNR 59
S L F V P F++ L N+ PR+G T K+ A +RNR
Sbjct: 12 SRELRLLTPTHFTYVFDNATPAVSPSFTV--LARKNTLSTPRLGITLAKKRIRKAHDRNR 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R ++E+ R + D ++I K A + +E+ + ++ +
Sbjct: 70 LKRLVRESFRHKQHNL--PNVDIIVIGKSGADNLSNQEVFATLDKLWKKLNKR 120
>gi|161508220|ref|YP_001578191.1| ribonuclease P [Lactobacillus helveticus DPC 4571]
gi|260101880|ref|ZP_05752117.1| ribonuclease P protein component [Lactobacillus helveticus DSM
20075]
gi|172048192|sp|A8YTQ9|RNPA_LACH4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160349209|gb|ABX27883.1| ribonuclease P [Lactobacillus helveticus DPC 4571]
gi|260084308|gb|EEW68428.1| ribonuclease P protein component [Lactobacillus helveticus DSM
20075]
gi|323467510|gb|ADX71197.1| Ribonuclease P protein component [Lactobacillus helveticus H10]
gi|328463994|gb|EGF35492.1| ribonuclease P [Lactobacillus helveticus MTCC 5463]
Length = 122
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGNSVANRAFVIYKVEKPENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDEEKLEIDPQ-VDFLIITRPYARNFDMVKVRKNLLHALALAHIIEEMPDE 118
>gi|332308618|ref|YP_004436469.1| ribonuclease P protein component [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175947|gb|AEE25201.1| ribonuclease P protein component [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 120
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V K P +L +NN++N PR+G TV K+ A +RNR
Sbjct: 7 SRELRLLTPTHFEFVFKNATPAVSPNLTLLARHNNSAN--PRLGITVAKKRVKKAHDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
++R ++E+ R + + D V++ K + +EL + ++ + +
Sbjct: 65 IKRIVRESFRNHQQSL--PNIDIVVVGKSGLDKLSNQELFLVLSKLWKKLAKRCEKSQ 120
>gi|302535575|ref|ZP_07287917.1| ribonuclease P protein component [Streptomyces sp. C]
gi|302444470|gb|EFL16286.1| ribonuclease P protein component [Streptomyces sp. C]
Length = 124
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLN---------NNNSNLLPRVGFTVTKKQGCAV 55
L++R FA + R G + L +++ PR GF V+K G AV
Sbjct: 6 NRLRRREDFASAVRRGRRAGRPLLVVHLRTSGATDPHEPGDADPSPRAGFVVSKAVGIAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RRL+ VR + G V+ A A EL + R
Sbjct: 66 VRNRVKRRLRHLVRDRLAQL-PAGSLVVVRALPGAADAGVDELARDLDAALARL 118
>gi|255326483|ref|ZP_05367565.1| ribonuclease P protein component [Rothia mucilaginosa ATCC 25296]
gi|255296523|gb|EET75858.1| ribonuclease P protein component [Rothia mucilaginosa ATCC 25296]
Length = 121
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ +F+ + + ++ V N +VGF V+K G AV RN +
Sbjct: 2 LPQRHRMRTSAEFSHAFRSG-IRTGRRNIVVSTAKNPGKTTQVGFIVSKAVGNAVTRNLV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+E L G+ + A + + +L + + ++
Sbjct: 61 KRRLRELAALTCAA-HPEGYAIAVRALPASASASWDQLRRDYESALEAAFAKLDLSQSKE 119
Query: 121 R 121
+
Sbjct: 120 K 120
>gi|224541286|ref|ZP_03681825.1| hypothetical protein CATMIT_00446 [Catenibacterium mitsuokai DSM
15897]
gi|224525790|gb|EEF94895.1| hypothetical protein CATMIT_00446 [Catenibacterium mitsuokai DSM
15897]
Length = 112
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + K F L N N R+G +V KK G AV RN+
Sbjct: 1 MKKELRVKKSTEFETIIKKRKSVANREFVLYW--NPNDLEHMRIGLSVGKKIGNAVARNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+++ V + DY+LI ++ F++ + K+
Sbjct: 59 TKRQVRMMVHELFTKEDHN--DYILIVRKPYSQNDFEQNKKSLQNLYLKMKKRMEK 112
>gi|89897805|ref|YP_521292.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
gi|89337253|dbj|BAE86848.1| ribonuclease P protein component [Desulfitobacterium hafniense Y51]
Length = 117
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+++ + V +G+ G + + V + R GF +KK G AV RNR
Sbjct: 8 LQRSLRLRQKSLYRKVFAQGKSFSGKYVVIYV-----AEGPSRFGFIASKKVGNAVVRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E +RL + K + IA+ + + ++ N ++ + + K
Sbjct: 63 AKRLMREVIRLHLAEM-KENTQIICIARSSIKGVSYSQVENSLLKSLYKAK 112
>gi|116672713|ref|YP_833646.1| ribonuclease P protein component [Arthrobacter sp. FB24]
gi|166226698|sp|A0K2M6|RNPA_ARTS2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116612822|gb|ABK05546.1| ribonuclease P protein component [Arthrobacter sp. FB24]
Length = 136
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ L+ F+ + +R G + ++ R+GF V+K G AV RN +
Sbjct: 2 LATRNRLRTSTDFSTTVRSGVRNGRRNVVLYTVAIAADEPSRIGFIVSKSVGNAVVRNLV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+EA L + G V+ A A + +L + + + +
Sbjct: 62 KRRLREAGALSLQQYGT-GFAIVVRALPAAAAASWDQLLADYNAALETTMKRLGGRLPRA 120
>gi|293364062|ref|ZP_06610798.1| ribonuclease P protein component [Mycoplasma alligatoris A21JP2]
gi|292552552|gb|EFF41326.1| ribonuclease P protein component [Mycoplasma alligatoris A21JP2]
Length = 112
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + + + F + +S +VG TV KK AV RN
Sbjct: 1 MKKQYRLQKNWEFNDLIRRNKQFSNNFLVAYYQKADS---LKVGITVPKKFANAVWRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+L+ + + + + +V I +++ L F + + + K
Sbjct: 58 KRQLRAII--HQANIYELNYHFVFIVRKEFLNADFALKKESIQKMLEKFKNESKK 110
>gi|148266441|ref|YP_001233147.1| ribonuclease P [Geobacter uraniireducens Rf4]
gi|226736870|sp|A5G9V6|RNPA_GEOUR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146399941|gb|ABQ28574.1| ribonuclease P protein component [Geobacter uraniireducens Rf4]
Length = 113
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L KR +F F L L + + ++G TV++K G +V RNR+
Sbjct: 7 PKYERLLKRSEFVQFTNARQRIHTAHFIL--LWTHTEDSTLKIGITVSRKVGNSVIRNRV 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R ++E RL + ++ +IAK+ A + F+ L + R +
Sbjct: 65 KRLVREFYRLNKSRFVMAHYN--IIAKKGAEQLDFQRLSRELANVLERLHK 113
>gi|171911026|ref|ZP_02926496.1| ribonuclease P protein component [Verrucomicrobium spinosum DSM
4136]
Length = 130
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+ +F V+ G G + L VL + R G ++K G AV+RN +RRRL
Sbjct: 8 RLRSASEFGRVRSEGTTYPGRYVVLGVL-RADEEAPWRSGLITSRKVGGAVQRNLVRRRL 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E +R L G V+IA+ A F EL F + +R
Sbjct: 67 REILR---ATPLAPGVWLVVIARWKAAGATFDELRTDFQKVAKRA 108
>gi|302341716|ref|YP_003806245.1| ribonuclease P protein component [Desulfarculus baarsii DSM 2075]
gi|301638329|gb|ADK83651.1| ribonuclease P protein component [Desulfarculus baarsii DSM 2075]
Length = 124
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+ R QF ++ G + F + R+G TV++K AV RNR+
Sbjct: 9 PKRARLRSRGQFLQMRNGARRHRCDHFLVVWKAGPP--GPARLGLTVSRKVAGAVGRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +E R + +L D ++I +R A F + E +
Sbjct: 67 KRLAREVFR-RSGELLPPAVDVLVIVQRGADRQDFSSVWRQLREAFGKI 114
>gi|256851672|ref|ZP_05557060.1| ribonuclease P protein component [Lactobacillus jensenii 27-2-CHN]
gi|260661611|ref|ZP_05862523.1| ribonuclease P protein component [Lactobacillus jensenii 115-3-CHN]
gi|282934244|ref|ZP_06339521.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|297205281|ref|ZP_06922677.1| ribonuclease P [Lactobacillus jensenii JV-V16]
gi|256615630|gb|EEU20819.1| ribonuclease P protein component [Lactobacillus jensenii 27-2-CHN]
gi|260547668|gb|EEX23646.1| ribonuclease P protein component [Lactobacillus jensenii 115-3-CHN]
gi|281301718|gb|EFA93985.1| ribonuclease P protein component [Lactobacillus jensenii 208-1]
gi|297149859|gb|EFH30156.1| ribonuclease P [Lactobacillus jensenii JV-V16]
Length = 122
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V KG+ F + L + RVG +V KK G AV RN
Sbjct: 1 MKKSYRVKSEKDFQTVFNKGDSVANRAFVVYKLIRPENKHF-RVGISVGKKVGHTAVVRN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + V D+++I + A E+ + + + K
Sbjct: 60 RLKRYIRATLTEVKDEVDVKA-DFLVITRPYARKFTMAEVKKNLIHAMTLAK 110
>gi|327398262|ref|YP_004339131.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
gi|327180891|gb|AEA33072.1| Ribonuclease P protein component [Hippea maritima DSM 10411]
Length = 112
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++F V KG PFF L L + + +VG +KK G AV+RNR
Sbjct: 4 LKKHYKSLTSKEFKEVYEKGGKVVTPFFVLFTLKDKEN---LKVGVVASKKIGKAVKRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RRL+E VRL L + VLIA++ L F+ + N F+ +++
Sbjct: 61 AKRRLREIVRLSQP-FLPNNIWIVLIARKAVLEADFQRMQNLFLNKLK 107
>gi|317154271|ref|YP_004122319.1| ribonuclease P protein component [Desulfovibrio aespoeensis Aspo-2]
gi|316944522|gb|ADU63573.1| ribonuclease P protein component [Desulfovibrio aespoeensis Aspo-2]
Length = 123
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L QF G R F L VL ++ R+G TV++K G AV RNR++
Sbjct: 8 KERRLLGSPQFTACYEHGRKRFTKRFILFVLRRDDGPSGLRLGLTVSRKMGNAVARNRIK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHFVERVRRNK 110
R ++E RL D V++ KR +A + F + R K
Sbjct: 68 RVVREYFRLHQYDFELP-LDIVVVPKRNLEASQLTLALATEEFSPLLSRAK 117
>gi|75909639|ref|YP_323935.1| ribonuclease P [Anabaena variabilis ATCC 29413]
gi|123608788|sp|Q3M7J6|RNPA_ANAVT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|75703364|gb|ABA23040.1| ribonuclease P protein component [Anabaena variabilis ATCC 29413]
Length = 140
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 24/130 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL------------------- 40
+ LK R F V + G R F+L L +++
Sbjct: 3 LPKANRLKSRHDFQAVFREGLRRNSSHFTLRALKPSSAKKSSLDTAAKTQPADDVQDIPS 62
Query: 41 PRVGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKE 97
+G +++ K AV RNR++R++ A++ + G V+I K A ++
Sbjct: 63 TLIGVSISTKVSKRAVVRNRIKRQITAAMQQLLPRLA-PGWKLVVIVKPTAAESKCGSQQ 121
Query: 98 LCNHFVERVR 107
+ +
Sbjct: 122 FLQELEQLLA 131
>gi|325106611|ref|YP_004267679.1| ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
gi|324966879|gb|ADY57657.1| Ribonuclease P protein component [Planctomyces brasiliensis DSM
5305]
Length = 138
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
C +K +F + R G L N + R+G +V+KK G AV RNR +
Sbjct: 13 PRECRMKTPAEFQRAYARKQRAGDRNLLIFC-TPNGMTISRIGLSVSKKNGNAVCRNRKK 71
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
R L+EA RL + G DY+LI + D ++ ++ R + + +
Sbjct: 72 RLLREAFRLTRHKL-PIGFDYILIPRVDV-QSTLEDYRKSLKYLTKKLARREAASNHQA 128
>gi|171741735|ref|ZP_02917542.1| hypothetical protein BIFDEN_00826 [Bifidobacterium dentium ATCC
27678]
gi|283457087|ref|YP_003361651.1| ribonuclease P protein component [Bifidobacterium dentium Bd1]
gi|306823998|ref|ZP_07457372.1| ribonuclease P protein component [Bifidobacterium dentium ATCC
27679]
gi|309801953|ref|ZP_07696067.1| ribonuclease P protein component [Bifidobacterium dentium
JCVIHMP022]
gi|171277349|gb|EDT45010.1| hypothetical protein BIFDEN_00826 [Bifidobacterium dentium ATCC
27678]
gi|283103721|gb|ADB10827.1| RnpA Ribonuclease P protein component [Bifidobacterium dentium Bd1]
gi|304552996|gb|EFM40909.1| ribonuclease P protein component [Bifidobacterium dentium ATCC
27679]
gi|308221401|gb|EFO77699.1| ribonuclease P protein component [Bifidobacterium dentium
JCVIHMP022]
Length = 120
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 9/121 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLN--------NNNSNLLPRVGFTVTKKQGCAV 55
+ LK R F V K R + ++ + RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYAMHDDVFISDSTARSGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RN ++RR + R +L D VL AK A F L + R
Sbjct: 61 TRNTVKRRFRVLARKHE-FLLPESCDIVLRAKPSAAHADFSSLDHQMAACFEAISRKAAH 119
Query: 116 G 116
Sbjct: 120 Q 120
>gi|323516072|gb|ADX90453.1| RNase P protein component [Acinetobacter baumannii TCDC-AB0715]
Length = 133
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 14 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 73
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL + D V++ K I EL ++ +R
Sbjct: 74 RESFRLHQPK-FESDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 123
>gi|296121796|ref|YP_003629574.1| ribonuclease P protein component [Planctomyces limnophilus DSM
3776]
gi|296014136|gb|ADG67375.1| ribonuclease P protein component [Planctomyces limnophilus DSM
3776]
Length = 162
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNN--------------NNSNLLPRVGFTVT 48
L++ +F LV + + + L N + R+G +V+
Sbjct: 6 KAQHLRRPAEFELVYRHKQKVADGVLLVFARRRSAHVPNQRTTETQNEDLSITRLGLSVS 65
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K++G AV RNR +R ++EA RL G D +++ + ++ V+ R+
Sbjct: 66 KRRGNAVVRNREKRLIREAFRLTQHER-PPGLDLIVVP-IATTPLTLDQVKQSLVKLSRK 123
Query: 109 NKRSYYSGKN 118
R N
Sbjct: 124 LDRRIPQTSN 133
>gi|257470418|ref|ZP_05634509.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|317064626|ref|ZP_07929111.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
gi|313690302|gb|EFS27137.1| ribonuclease P protein component [Fusobacterium ulcerans ATCC
49185]
Length = 116
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N L R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKK-NEENLKRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA----LFIPFKELCNHFVERVRRNK 110
R E LK G+D + +AKR A + ++++ ++ ++ +K
Sbjct: 63 YYRK-FENQLKDGYDIIFVAKRTAGEKVKTLKYQDMEKDLMKVMKSSK 109
>gi|91228354|ref|ZP_01262282.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269965282|ref|ZP_06179403.1| ribonuclease P [Vibrio alginolyticus 40B]
gi|91188114|gb|EAS74418.1| ribonuclease P [Vibrio alginolyticus 12G01]
gi|269830083|gb|EEZ84311.1| ribonuclease P [Vibrio alginolyticus 40B]
Length = 118
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ NN PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNKLSHPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 69 ARESFRNNQHQL--PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|57167875|ref|ZP_00367015.1| ribonuclease P protein component [Campylobacter coli RM2228]
gi|305432099|ref|ZP_07401266.1| ribonuclease P protein component [Campylobacter coli JV20]
gi|57020997|gb|EAL57661.1| ribonuclease P protein component [Campylobacter coli RM2228]
gi|304445183|gb|EFM37829.1| ribonuclease P protein component [Campylobacter coli JV20]
Length = 108
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +F+ V K G+ + L N+ ++ +KK G AV RNR
Sbjct: 1 MKTFGKFSENEEFSAVYKTGKKWYCDGIIIFYLKNDEQ----KMAVVASKKVGKAVIRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + Y+ +AK + PF L + +++ +
Sbjct: 57 SKRILRALFTQFENKLQNGK--YIFVAKSEITQFPFSRLEKNLKWGLKKLE 105
>gi|158520117|ref|YP_001527987.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
gi|226736860|sp|A8ZRZ3|RNPA_DESOH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158508943|gb|ABW65910.1| ribonuclease P protein component [Desulfococcus oleovorans Hxd3]
Length = 121
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L KR +F + G+ F + N R+G TV+KK G A RNR+
Sbjct: 7 KKEDRLLKRYEFIEIFTSGKTVHSSCFLAGIKKNRKER--IRLGITVSKKVGKAARRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R ++E RL + + D +IAK+ A+ EL E ++ R
Sbjct: 65 KRHVREFFRLHRDNLSNC-WDINVIAKKKAVNASPAELERSLAELFHKSSR 114
>gi|189485050|ref|YP_001955991.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287009|dbj|BAG13530.1| RNase P protein component [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 139
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L ++ F + K G + + V N+ +++ R+G TK+ G AV RNR +R
Sbjct: 28 FERLHIQKDFDKIFKNGLRLENKNIKILVYKRNDGHIIRRLGLITTKRVGAAVIRNRTKR 87
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RL+E R L+ G D + I+K + + L + + ++
Sbjct: 88 RLREIFRTNKH-FLESGLDLIFISKPGTALLDYDSLKKNILGLLK 131
>gi|15603028|ref|NP_246100.1| ribonuclease P [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721511|gb|AAK03247.1| RnpA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 130
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V + P ++ L N+ PR+G TV K A +RNR
Sbjct: 18 SRELRLLTPLHFKYVFEQPFRASTPELTI--LARPNNLAHPRLGLTVAKKHLKKAHDRNR 75
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + +R+ R
Sbjct: 76 IKRLCRESFRLAQYKL--PNCDFVIVAKQGIGKLDNRTLTQTLDKLWQRHIRLAQKS 130
>gi|17230905|ref|NP_487453.1| ribonuclease P [Nostoc sp. PCC 7120]
gi|21542219|sp|Q8YRN1|RNPA_ANASP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|17132546|dbj|BAB75112.1| ribonuclease P [Nostoc sp. PCC 7120]
Length = 140
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 24/130 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-------------------NSNLL 40
+ LK R F V + G R F+L L + +
Sbjct: 3 LPKANRLKSRHDFQAVFREGLRRNSSHFTLRALKPSSARKSSLDTAAQTQPVDEVQNIPS 62
Query: 41 PRVGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKE 97
+G +++ K AV RNR++R++ A++ + G V+I K A ++
Sbjct: 63 TLIGVSISTKVSKRAVVRNRIKRQITAAMQQLLPRLA-PGWKLVVIVKPTAAESKCGSQQ 121
Query: 98 LCNHFVERVR 107
+ +
Sbjct: 122 FLQELEQLLA 131
>gi|83319517|ref|YP_424811.1| ribonuclease P protein component [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|1173100|sp|P43039|RNPA_MYCCT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|416239|dbj|BAA03619.1| RNaseP C5 subunit [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283403|gb|ABC01335.1| ribonuclease P protein component [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 109
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++KK +F + + K F + +N + G +V KK G AV RN+
Sbjct: 1 MKNKRVIKKNFEFQEIINYKKTIKNFCFVIYY--KDNEESYLKYGISVGKKIGNAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ ++ + D +++ ++ L + + L ++ ++ K
Sbjct: 59 VKRQIRMILKQNISEIGTVSKDIIILVRKSVLELKYATLSKLLIKLIKEIK 109
>gi|166714254|ref|ZP_02245461.1| ribonuclease P [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 145
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLRRA 115
>gi|156972772|ref|YP_001443679.1| ribonuclease P [Vibrio harveyi ATCC BAA-1116]
gi|163803613|ref|ZP_02197479.1| ribonuclease P [Vibrio sp. AND4]
gi|269962687|ref|ZP_06177032.1| ribonuclease P [Vibrio harveyi 1DA3]
gi|166228259|sp|A7N1E4|RNPA_VIBHB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156524366|gb|ABU69452.1| hypothetical protein VIBHAR_00437 [Vibrio harveyi ATCC BAA-1116]
gi|159172607|gb|EDP57465.1| ribonuclease P [Vibrio sp. AND4]
gi|269832610|gb|EEZ86724.1| ribonuclease P [Vibrio harveyi 1DA3]
Length = 118
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ NN PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNKLSHPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +EL F + R R
Sbjct: 69 ARESFRNNQHQL--PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 117
>gi|78045102|ref|YP_358874.1| ribonuclease P protein component [Carboxydothermus hydrogenoformans
Z-2901]
gi|123577257|sp|Q3AG60|RNPA_CARHZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|77997217|gb|ABB16116.1| ribonuclease P protein component [Carboxydothermus hydrogenoformans
Z-2901]
Length = 116
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ L K ++ + G +F + L N + LP G +V+KK G AV RNR
Sbjct: 1 MNKCRFLSKNEEYRNIYQNGRSIASRYFVVYYLKNEDEKKLPSFGISVSKKIGKAVVRNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+RRRLKEA++ L G+DYV+I + F + + ++ KRS
Sbjct: 61 LRRRLKEALKRLCFEFL-PGYDYVIIPRLSFKNDEFSVILEQLLYIIKLMKRSI 113
>gi|283458993|ref|YP_003363643.1| RNase P protein component [Rothia mucilaginosa DY-18]
gi|283135058|dbj|BAI65823.1| RNase P protein component [Rothia mucilaginosa DY-18]
Length = 121
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 2/121 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ ++ +F+ + + ++ V N +VGF V+K G AV RN +
Sbjct: 2 LPQRHRMRTSTEFSHAFRSG-IRTGRRNIVVSTAKNPGKTTQVGFIVSKAVGNAVTRNLV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+RRL+E L G+ + A + + +L + + ++
Sbjct: 61 KRRLRELAALTCAA-HPEGYAIAVRALPASASASWDQLRRDYESALETAFAKLDLHQSKE 119
Query: 121 R 121
+
Sbjct: 120 K 120
>gi|183597174|ref|ZP_02958667.1| hypothetical protein PROSTU_00417 [Providencia stuartii ATCC 25827]
gi|188023488|gb|EDU61528.1| hypothetical protein PROSTU_00417 [Providencia stuartii ATCC 25827]
Length = 119
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
L R F V K R + +L N PR+G T+ K A ERNR++R
Sbjct: 11 RLLTPRHFDNVFKQPQRASSP-EITILGRLNELGHPRIGLTIAKKNVKRAHERNRIKRLA 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E RL + D+V++ ++ + +++ + RR+ R
Sbjct: 70 REYFRLHQHEL--PPMDFVVLVRKGVANLDNQQITETLGKLWRRHCR 114
>gi|296273899|ref|YP_003656530.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM 7299]
gi|296098073|gb|ADG94023.1| ribonuclease P protein component [Arcobacter nitrofigilis DSM 7299]
Length = 111
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S L R F + + G+ P F ++ +GF +KK G AV RN+
Sbjct: 4 LSKEYRLNSSRDFRQIYQSGKKWHTPSFVAFFRSSEKLE----IGFVTSKKVGNAVFRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRRL+ V ++ YV +AK + + EL F +R
Sbjct: 60 ARRRLRAIVLENENIIITGK--YVFVAKDELFNKSYIELQKDFNFAFKRL 107
>gi|260912767|ref|ZP_05919253.1| ribonuclease P protein component [Pasteurella dagmatis ATCC 43325]
gi|260633145|gb|EEX51310.1| ribonuclease P protein component [Pasteurella dagmatis ATCC 43325]
Length = 122
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L F V + R + +L N PR+G TV K A +RNR+
Sbjct: 7 SRELRLLTPVHFEYVFEQPSRASTP-EITILARPNQLGHPRLGLTVAKKHLKRAHDRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E+ RL + +D+V++AK+ + L + +R+ R
Sbjct: 66 KRLCRESFRLAQHKL--PHYDFVIVAKQGIGKLENNALTQTLDKLWQRHIRLAQKS 119
>gi|237809903|ref|YP_002894343.1| ribonuclease P [Tolumonas auensis DSM 9187]
gi|237502164|gb|ACQ94757.1| ribonuclease P protein component [Tolumonas auensis DSM 9187]
Length = 119
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V P +L + N+ ++ PR+G + K AV RNR
Sbjct: 8 PRELRLLTPDTFQKVFAQPVRASSPHLTLLAIRNDLTH--PRLGLAIPKKALKRAVWRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+++E+ RL + D V+IAK + +L + R R
Sbjct: 66 VKRQIRESFRLHQHEL--PPIDIVVIAKAPVRGLENPDLSQLLDKLWRTLARR 116
>gi|256786611|ref|ZP_05525042.1| ribonuclease P component [Streptomyces lividans TK24]
gi|289770503|ref|ZP_06529881.1| ribonuclease P [Streptomyces lividans TK24]
gi|289700702|gb|EFD68131.1| ribonuclease P [Streptomyces lividans TK24]
Length = 123
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQG 52
+ L++R FA + R G + L + S R GF V+K G
Sbjct: 2 LPTENRLRRREDFATAVRRGRRAGRPTLVVHLRSGATDPHAPGESAPRTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV RN+++RRL+ +R +L G V+ A A +L + R
Sbjct: 62 VAVVRNKVKRRLRHLMRDRI-DLLPPGSLVVVRALPGAGDADHAQLARDLDAALARL 117
>gi|218708093|ref|YP_002415714.1| ribonuclease P [Vibrio splendidus LGP32]
gi|218321112|emb|CAV17062.1| Ribonuclease P protein component [Vibrio splendidus LGP32]
Length = 121
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V K P F++ NNS PR+G V KKQ RNR +R
Sbjct: 14 RLLTPEHYQNVFKQAHRAGSPHFTIIA--RNNSLSNPRLGLAVPKKQIKTAVGRNRFKRL 71
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + DYV+IAK+ A + +E+ + R R
Sbjct: 72 TRESFRNTQHKL--PNKDYVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 120
>gi|306840924|ref|ZP_07473666.1| ribonuclease P protein component [Brucella sp. BO2]
gi|306289047|gb|EFM60309.1| ribonuclease P protein component [Brucella sp. BO2]
Length = 113
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 49/87 (56%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+ PRVGFTVTKK G AV RNR+RRRLKEA+R A + DYV++A+ AL PF
Sbjct: 18 KTGDNPRVGFTVTKKNGNAVIRNRIRRRLKEAIRCHAGRDMAPSTDYVIVAREQALNAPF 77
Query: 96 KELCNHFVERVRRNKRSYYSGKNFSRK 122
+L R++ GK + +
Sbjct: 78 SQLTEELSRRIKAKGERRSGGKRRTER 104
>gi|260558091|ref|ZP_05830302.1| ribonuclease P [Acinetobacter baumannii ATCC 19606]
gi|260408445|gb|EEX01752.1| ribonuclease P [Acinetobacter baumannii ATCC 19606]
Length = 131
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 12 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 72 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|291327296|ref|ZP_06127707.2| ribonuclease P protein component [Providencia rettgeri DSM 1131]
gi|291310907|gb|EFE51360.1| ribonuclease P protein component [Providencia rettgeri DSM 1131]
Length = 119
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
+ L R F V K R + +L N PR+G T+ K A ERNR+
Sbjct: 7 TRELRLLTPRHFDNVFKQPQRASSP-EITILGRLNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E RL + D+V++ ++ + +++ + RR++R
Sbjct: 66 KRLAREYFRLHQHEL--PSMDFVVLVRKGVANLDNQQITEALDKLWRRHRRLAQKS 119
>gi|169797812|ref|YP_001715605.1| RNase P C5 component [Acinetobacter baumannii AYE]
gi|238688032|sp|B0V5R2|RNPA_ACIBY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169150739|emb|CAM88651.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter baumannii AYE]
Length = 131
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 12 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 72 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|294138800|ref|YP_003554778.1| ribonuclease P protein component [Shewanella violacea DSS12]
gi|293325269|dbj|BAI99999.1| ribonuclease P protein component [Shewanella violacea DSS12]
Length = 118
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V + K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 11 RLLTPAQFKSVF-AKPIKASSAEITLLAIPNSEQHPRIGLTVAKRFVKKAHQRNRIKRII 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + + + EL + R+ R
Sbjct: 70 RDNFRLHQHEL--PPVDIVVLVRNGVVEMENAELHKLVEKLWRKLTRR 115
>gi|254384776|ref|ZP_05000113.1| ribonuclease P protein component [Streptomyces sp. Mg1]
gi|194343658|gb|EDX24624.1| ribonuclease P protein component [Streptomyces sp. Mg1]
Length = 124
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNS---------NLLPRVGFTVTKKQGCAV 55
L++R FA + R G + L + + + R GF V+K G AV
Sbjct: 6 NRLRRREDFASAVRRGRRAGRPLLVVHLRTSGATDPHEPGEIDPSTRAGFVVSKAVGIAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RRL+ VR + G V+ A + EL + R
Sbjct: 66 VRNRVKRRLRHLVRERLSQL-PPGSLVVVRALPGSGDAGLDELARDLDAALARL 118
>gi|323141439|ref|ZP_08076329.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
gi|322414095|gb|EFY04924.1| ribonuclease P protein component [Phascolarctobacterium sp. YIT
12067]
Length = 125
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + LK ++ F +V S+ + + ++G V KK GCAV RNR+
Sbjct: 15 LKKLNRLKSKKSFQIVYVKGRTVVDAMSVFYIL-PDQGEDIKIGLAVGKKLGCAVVRNRV 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E R+ + K G+ V +A++ +K F+ +R
Sbjct: 74 KRLMREVFRMHKAEL-KKGYHIVWVARKKLTKADYKTFERVFLRLAKRA 121
>gi|148270461|ref|YP_001244921.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
gi|166228258|sp|A5IMC2|RNPA_THEP1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147736005|gb|ABQ47345.1| ribonuclease P protein component [Thermotoga petrophila RKU-1]
Length = 117
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F + K GE + +F + N R+G V +K G A RN+++R ++E R
Sbjct: 16 DFLTIFKEGESLQNEYFVVLFKKN--GLDYSRLGIVVKRKFGKATRRNKLKRWVREIFRK 73
Query: 71 CAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
++GV+ G D V+I ++ + F + + ++R +
Sbjct: 74 -SKGVIPKGFDIVVIPRKKLSEEFEQVDFWAVHEKLLNLLKRIE 116
>gi|50123362|ref|YP_052529.1| ribonuclease P [Pectobacterium atrosepticum SCRI1043]
gi|60390380|sp|Q6CYR1|RNPA_ERWCT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|49613888|emb|CAG77340.1| ribonuclease P protein component [Pectobacterium atrosepticum
SCRI1043]
Length = 119
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRMNSLGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|255320705|ref|ZP_05361882.1| ribonuclease P protein component [Acinetobacter radioresistens
SK82]
gi|262380665|ref|ZP_06073818.1| ribonuclease P [Acinetobacter radioresistens SH164]
gi|255302321|gb|EET81561.1| ribonuclease P protein component [Acinetobacter radioresistens
SK82]
gi|262297613|gb|EEY85529.1| ribonuclease P [Acinetobacter radioresistens SH164]
Length = 130
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 3/118 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S ++ + V G L K L R+G V KK A ERNR+
Sbjct: 7 STAVRIRCAADYKSVFDGALFKVHQPHFLFLARPTELHHSRLGIVVAKKKVRRAHERNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R +E+ RL + + D V++ K I EL ++ +R +
Sbjct: 67 KRLARESFRLHQQQLEL--LDIVVMPKIGIEDISNAELHQQLQIAWQKLQRQVKKHRK 122
>gi|227113118|ref|ZP_03826774.1| ribonuclease P [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 119
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPHITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|77361921|ref|YP_341496.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas haloplanktis TAC125]
gi|123589156|sp|Q3IK52|RNPA_PSEHT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76876832|emb|CAI88054.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Pseudoalteromonas haloplanktis TAC125]
Length = 140
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L ++ + PFF+L L N PR+G TV K+ A +RNR++R
Sbjct: 11 RLLTPSHYSRIFNEPARAATPFFTL--LAKPNDQDQPRLGLTVAKKRVKKACQRNRIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E RL + D VL+ K +EL + R+
Sbjct: 69 ARECFRLNKHNID--NIDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|209886639|ref|YP_002290496.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
gi|209874835|gb|ACI94631.1| ribonuclease P protein component [Oligotropha carboxidovorans OM5]
Length = 132
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR F +G P F ++ ++ R+GFTV+KK G A ERNR+RRRL+
Sbjct: 3 RLKKRADFLAAAQGPRAARPAFVVQARLRDDP-GPTRIGFTVSKKVGTATERNRVRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ VR G DYV++ +R+AL F+ L F + ++
Sbjct: 62 DMVRQAGLGTAPSPRDYVIVGRRNALNREFQVLIADFRAALAHLSKAK 109
>gi|297182641|gb|ADI18799.1| hypothetical protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 121
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAV 55
M LK+ +QF + K + +F++ N N + F + K G AV
Sbjct: 1 MIKFQSLKQSKQFLRILKKKRLNTKYFTIYFEKNLSSAKKNDKNFLNISFVIKKNIGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLK--HGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RN+++R+LK AV+ + + YV+ + + F+ + + + +R K+
Sbjct: 61 IRNKIKRKLKSAVQKVLKEKQPVDLNYTYVIFGRNNVYKDKFRLIFDEVNDMFKRIKQ 118
>gi|184156327|ref|YP_001844666.1| RNase P protein component [Acinetobacter baumannii ACICU]
gi|213155392|ref|YP_002317437.1| ribonuclease P protein component [Acinetobacter baumannii AB0057]
gi|215485159|ref|YP_002327400.1| ribonuclease P protein component [Acinetobacter baumannii
AB307-0294]
gi|239503911|ref|ZP_04663221.1| RNase P C5 component [Acinetobacter baumannii AB900]
gi|301345947|ref|ZP_07226688.1| ribonuclease P protein component [Acinetobacter baumannii AB056]
gi|301510084|ref|ZP_07235321.1| ribonuclease P protein component [Acinetobacter baumannii AB058]
gi|301594678|ref|ZP_07239686.1| ribonuclease P protein component [Acinetobacter baumannii AB059]
gi|332854711|ref|ZP_08435498.1| ribonuclease P protein component [Acinetobacter baumannii 6013150]
gi|332865591|ref|ZP_08436431.1| ribonuclease P protein component [Acinetobacter baumannii 6013113]
gi|183207921|gb|ACC55319.1| RNase P protein component [Acinetobacter baumannii ACICU]
gi|213054552|gb|ACJ39454.1| ribonuclease P protein component [Acinetobacter baumannii AB0057]
gi|213987026|gb|ACJ57325.1| ribonuclease P protein component [Acinetobacter baumannii
AB307-0294]
gi|332727868|gb|EGJ59270.1| ribonuclease P protein component [Acinetobacter baumannii 6013150]
gi|332735243|gb|EGJ66320.1| ribonuclease P protein component [Acinetobacter baumannii 6013113]
Length = 130
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 71 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 120
>gi|145221423|ref|YP_001132101.1| ribonuclease P protein component [Mycobacterium gilvum PYR-GCK]
gi|189043739|sp|A4T4T3|RNPA_MYCGI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145213909|gb|ABP43313.1| ribonuclease P protein component [Mycobacterium gilvum PYR-GCK]
Length = 124
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNS-NLLPRVGFTVTKKQGCAVERN 58
+ + + +F V +G P L L ++ + PRVG V+K G AV R+
Sbjct: 2 LPAQYRMTRSTEFGATVSRGTRAAQPDLVLYTLRSDETGEPGPRVGLIVSKAVGNAVVRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R+ RRL+ A R E + V+ A + + + R + +N
Sbjct: 62 RVSRRLRHAARGILERLDSRD-RVVIRALPRSRDAGTQRFEQELHTALDRIHARTITARN 120
>gi|213581268|ref|ZP_03363094.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 138
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+E+ RL + D+V++AK+ + + L
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEN 96
>gi|212712609|ref|ZP_03320737.1| hypothetical protein PROVALCAL_03704 [Providencia alcalifaciens DSM
30120]
gi|212684825|gb|EEB44353.1| hypothetical protein PROVALCAL_03704 [Providencia alcalifaciens DSM
30120]
Length = 119
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
+ L R F V K R + +L N PR+G T+ K A ERNR+
Sbjct: 7 TRELRLLTPRHFDNVFKQPQRASSP-EITILGRLNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E RL + D+V++ +R + +++ + RR++R
Sbjct: 66 KRLAREYFRLHQHEL--PSMDFVVLVRRGVADLDNQQITESLDKLWRRHRRLAQKS 119
>gi|190576476|ref|YP_001974321.1| putative ribonuclease P [Stenotrophomonas maltophilia K279a]
gi|190014398|emb|CAQ48046.1| putative ribonuclease P [Stenotrophomonas maltophilia K279a]
Length = 164
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
++ R +++ V G P +L L ++ R+G V++K AV RNR
Sbjct: 23 PRSARVRTRAEYSTVFNGARRVSDPLMTLHWLP---ADRPARLGLAVSRKVDPNAVGRNR 79
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
++R L++ +R + D+V++A+ A E+ F
Sbjct: 80 IKRVLRDILRQTRTDIQPG--DFVVVARSAARSASNDEIRQAF 120
>gi|167548871|ref|ZP_02342630.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205325568|gb|EDZ13407.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 119
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLHQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|15640038|ref|NP_062590.1| ribonuclease P [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591468|ref|ZP_01678741.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|147674882|ref|YP_001218406.1| ribonuclease P [Vibrio cholerae O395]
gi|153819846|ref|ZP_01972513.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|153821956|ref|ZP_01974623.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|153830820|ref|ZP_01983487.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|227080243|ref|YP_002808794.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|229508292|ref|ZP_04397796.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229508869|ref|ZP_04398360.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229515954|ref|ZP_04405411.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229517140|ref|ZP_04406586.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229520179|ref|ZP_04409606.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229524908|ref|ZP_04414313.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229530207|ref|ZP_04419596.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229606566|ref|YP_002877214.1| ribonuclease P [Vibrio cholerae MJ-1236]
gi|254226945|ref|ZP_04920511.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|254291133|ref|ZP_04961930.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|254851571|ref|ZP_05240921.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297581959|ref|ZP_06943879.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|298501192|ref|ZP_07010991.1| ribonuclease P [Vibrio cholerae MAK 757]
gi|13878727|sp|Q9KVY2|RNPA_VIBCH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|172047496|sp|A5F483|RNPA_VIBC3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808097|sp|C3LP79|RNPA_VIBCM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|9654397|gb|AAF93184.1| ribonuclease P protein component [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546670|gb|EAX56852.1| ribonuclease P protein component [Vibrio cholerae 2740-80]
gi|125620550|gb|EAZ48918.1| ribonuclease P protein component [Vibrio cholerae V51]
gi|126509607|gb|EAZ72201.1| ribonuclease P protein component [Vibrio cholerae NCTC 8457]
gi|126520495|gb|EAZ77718.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|146316765|gb|ABQ21304.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|148873704|gb|EDL71839.1| ribonuclease P protein component [Vibrio cholerae 623-39]
gi|150422978|gb|EDN14928.1| ribonuclease P protein component [Vibrio cholerae AM-19226]
gi|227008131|gb|ACP04343.1| ribonuclease P protein component [Vibrio cholerae M66-2]
gi|227011991|gb|ACP08201.1| ribonuclease P protein component [Vibrio cholerae O395]
gi|229332340|gb|EEN97827.1| ribonuclease P protein component [Vibrio cholerae 12129(1)]
gi|229338489|gb|EEO03506.1| ribonuclease P protein component [Vibrio cholerae bv. albensis
VL426]
gi|229342773|gb|EEO07764.1| ribonuclease P protein component [Vibrio cholerae TM 11079-80]
gi|229346203|gb|EEO11175.1| ribonuclease P protein component [Vibrio cholerae RC9]
gi|229347054|gb|EEO12016.1| ribonuclease P protein component [Vibrio cholerae TMA 21]
gi|229354144|gb|EEO19076.1| ribonuclease P protein component [Vibrio cholerae B33]
gi|229354565|gb|EEO19487.1| ribonuclease P protein component [Vibrio cholerae BX 330286]
gi|229369221|gb|ACQ59644.1| ribonuclease P protein component [Vibrio cholerae MJ-1236]
gi|254847276|gb|EET25690.1| ribonuclease P protein component [Vibrio cholerae MO10]
gi|297533826|gb|EFH72667.1| ribonuclease P protein component [Vibrio cholerae RC385]
gi|297540064|gb|EFH76126.1| ribonuclease P [Vibrio cholerae MAK 757]
Length = 118
Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P ++ NN S+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQKVFQQAHSAGSPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRI 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL N + +R R
Sbjct: 69 CRESFRLHQNQLANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|260774543|ref|ZP_05883456.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
gi|260610449|gb|EEX35655.1| ribonuclease P protein component [Vibrio metschnikovii CIP 69.14]
Length = 118
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ +N+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQKVFQQAHRAGSPHFTIIA--RDNNLSHPRLGLAVPKKQIKTAVGRNRFKRI 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL F + R R
Sbjct: 69 ARESFRLHQHKLANK--DFVVIAKKTAQDLSNEELFTLFDKLWHRLSRPSR 117
>gi|253582578|ref|ZP_04859799.1| ribonuclease P [Fusobacterium varium ATCC 27725]
gi|251835448|gb|EES63988.1| ribonuclease P [Fusobacterium varium ATCC 27725]
Length = 116
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
LKK R+F ++ + ++SL N L R GF V+KK G AV RNR++R +E
Sbjct: 4 LKKDREFQIIYNSGRKSFGYYSLIFFKK-NEENLKRCGFVVSKKTGNAVCRNRLKRLFRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDA----LFIPFKELCNHFVERVR 107
R E LK G+D + +AKR A + ++++ ++ ++
Sbjct: 63 YYRK-FENQLKDGYDIIFVAKRTAGEKVKTLKYQDMEKDLIKVMK 106
>gi|242278538|ref|YP_002990667.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
gi|259494103|sp|C6C0J4|RNPA_DESAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|242121432|gb|ACS79128.1| ribonuclease P protein component [Desulfovibrio salexigens DSM
2638]
Length = 124
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L ++ +F L +G+ F L VL + + R+G TV++K+G AV RNR+
Sbjct: 7 KKEHKLLRKPEFDLCYEQGKKLFTKSFILFVLCHGSGPSGVRLGLTVSRKKGPAVVRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDA--LFIPFKELCNHFVERVRRNKR 111
+R L+ R+ + + D +++ KR I + + V + +
Sbjct: 67 KRVLRSYFRINQ-EIFQVRADIIIVPKRALDGKTITYALAEKELLPMVGKINK 118
>gi|86147170|ref|ZP_01065486.1| ribonuclease P [Vibrio sp. MED222]
gi|85835054|gb|EAQ53196.1| ribonuclease P [Vibrio sp. MED222]
Length = 118
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V K P F++ NNS PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFKQAHRAGSPHFTIIA--RNNSLSNPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + DYV+IAK+ A + +E+ + R R
Sbjct: 69 TRESFRNTQHKL--PNKDYVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 117
>gi|153212959|ref|ZP_01948553.1| ribonuclease P protein component [Vibrio cholerae 1587]
gi|124116185|gb|EAY35005.1| ribonuclease P protein component [Vibrio cholerae 1587]
Length = 118
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P ++ NN S+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQKVFQQAHSAGSPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL N + +R R
Sbjct: 69 CRESFRLHQNQLANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|258622953|ref|ZP_05717968.1| ribonuclease P [Vibrio mimicus VM573]
gi|258626077|ref|ZP_05720928.1| ribonuclease P [Vibrio mimicus VM603]
gi|258581603|gb|EEW06501.1| ribonuclease P [Vibrio mimicus VM603]
gi|258584736|gb|EEW09470.1| ribonuclease P [Vibrio mimicus VM573]
Length = 118
Score = 70.2 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P ++ NN S+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQKVFQQAHSAGSPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL N + +R R
Sbjct: 69 CRESFRLHQNQLAHK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 117
>gi|296395445|ref|YP_003660329.1| ribonuclease P protein component [Segniliparus rotundus DSM 44985]
gi|296182592|gb|ADG99498.1| ribonuclease P protein component [Segniliparus rotundus DSM 44985]
Length = 130
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 11/126 (8%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLL---------PRVGFTVTKKQGCA 54
++ RR F V+ G + L+ + PR+G V K+ G +
Sbjct: 6 NRMRNRRDFAETVRSGRRVGRGDVVVHFLSARSEKRAGCPVAEPCAPRIGLVVGKQVGGS 65
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V R R+ RRL+ A+ ++ V+ A A EL + +R+ +
Sbjct: 66 VTRKRVSRRLRAALGELLA-LVPQSSRLVVRALPAAAGAEVAELESQLRSALRKLAPATA 124
Query: 115 SGKNFS 120
K S
Sbjct: 125 EEKGPS 130
>gi|227878345|ref|ZP_03996302.1| ribonuclease P [Lactobacillus crispatus JV-V01]
gi|256843833|ref|ZP_05549320.1| ribonuclease P [Lactobacillus crispatus 125-2-CHN]
gi|256849612|ref|ZP_05555044.1| ribonuclease P protein component [Lactobacillus crispatus MV-1A-US]
gi|262046280|ref|ZP_06019243.1| ribonuclease P [Lactobacillus crispatus MV-3A-US]
gi|312984009|ref|ZP_07791357.1| ribonuclease P protein component [Lactobacillus crispatus CTV-05]
gi|227862081|gb|EEJ69643.1| ribonuclease P [Lactobacillus crispatus JV-V01]
gi|256613738|gb|EEU18940.1| ribonuclease P [Lactobacillus crispatus 125-2-CHN]
gi|256713728|gb|EEU28717.1| ribonuclease P protein component [Lactobacillus crispatus MV-1A-US]
gi|260573610|gb|EEX30167.1| ribonuclease P [Lactobacillus crispatus MV-3A-US]
gi|310894511|gb|EFQ43585.1| ribonuclease P protein component [Lactobacillus crispatus CTV-05]
Length = 122
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYKVEKTENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDE-EKLQINPHVDFLVITRPYARDFNMAQVRKNLLHALSLAHIIEEMPDK 118
Query: 119 FSRK 122
K
Sbjct: 119 VEEK 122
>gi|254456017|ref|ZP_05069446.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083019|gb|EDZ60445.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
HTCC7211]
Length = 113
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEV-LNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
S I L K +F + K + F ++ N N + F KK G AV+RN++
Sbjct: 3 SKILALSKNEEFKNLLKQKKISNKFVTIFFGTLENKDNKKLNISFVTKKKIGNAVKRNKI 62
Query: 61 RRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RRL+ + + + +K + Y++IAK L +K + + + + K
Sbjct: 63 KRRLRNIINDAVKKISIKFNYSYLVIAKSTMLNSDYKNIKESLFQDLEKIK 113
>gi|46198385|ref|YP_004052.1| ribonuclease P protein subunit [Thermus thermophilus HB27]
gi|46196007|gb|AAS80425.1| ribonuclease P protein subunit [Thermus thermophilus HB27]
Length = 192
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G + S++ L RVG V+KK G AV RN+++
Sbjct: 90 KLLSLKGDRAFQRLRKGRAGRGRYVSVKWLPAAE----LRVGIVVSKKVGKAVVRNKVK- 144
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A F EL V +R++
Sbjct: 145 ---RRLREILRRLHLPQAHLLVVASPEAREADFAELFRDVVRALRKS 188
>gi|311114012|ref|YP_003985233.1| ribonuclease P [Gardnerella vaginalis ATCC 14019]
gi|310945506|gb|ADP38210.1| ribonuclease P [Gardnerella vaginalis ATCC 14019]
Length = 175
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 40/152 (26%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLN-------------------------------- 33
LK R F V K + + +
Sbjct: 3 RLKSHRDFVAVLKKRRKVCSRDIVAHYDMRVCVTVLDALNEDRKVSPDDIATGFENTPAA 62
Query: 34 -------NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+++ R+G V+K G AV RN+++RR + + +L +G D VL A
Sbjct: 63 FCDTLKQPQKNDVALRLGLAVSKSVGKAVIRNKVKRRFRVIAKEHES-LLPYGCDVVLRA 121
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
K A F L + + ++
Sbjct: 122 KPTAAQSSFDSLNEQIKKIFGKIAKNLQDQNQ 153
>gi|163842275|ref|YP_001626680.1| ribonuclease P protein component [Renibacterium salmoninarum ATCC
33209]
gi|162955751|gb|ABY25266.1| ribonuclease P protein component [Renibacterium salmoninarum ATCC
33209]
Length = 139
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCA 54
+ L+ +F+ V+ G L L + RVGF V K G A
Sbjct: 8 LPAANRLRASSEFSNTVRSGVRSGRRNLVLYALVEPSGVAEKTSLPSRVGFIVAKSVGNA 67
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
V RN ++RRL+ G V+ A A ++EL N + R
Sbjct: 68 VVRNLVKRRLRSLAASTVLQY-PFGLRIVVRALPLAATSSWQELQNDYEAGFR 119
>gi|294056001|ref|YP_003549659.1| ribonuclease P protein component [Coraliomargarita akajimensis DSM
45221]
gi|293615334|gb|ADE55489.1| ribonuclease P protein component [Coraliomargarita akajimensis DSM
45221]
Length = 114
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-VGFTVTKKQGCAVERNRMRRR 63
L+ +R F V+ +G+ F L+ ++ R +G +K+ G AV+RNR +R
Sbjct: 8 RLRTQRDFQQVRTEGKRFLCGPFILQWRKHSEDEGGSRRLGVIASKRVGNAVKRNRGKRL 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++E R + + D V++ + F+EL + F++ + +
Sbjct: 68 MRELFRRHEQQL-PKAVDIVIVLRNGYDRFSFEELESRFLKTCKTIHK 114
>gi|328471233|gb|EGF42135.1| ribonuclease P [Vibrio parahaemolyticus 10329]
Length = 118
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ NN PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNKLSHPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 69 ARESFRNSQHQL--PNKDFVVIAKKSAQDLSNEEILKLFDKLWQRLSRPSR 117
>gi|84626028|ref|YP_453400.1| ribonuclease P [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|123520411|sp|Q2NX51|RNPA_XANOM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|84369968|dbj|BAE71126.1| Ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 145
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + F+ +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLRRA 115
>gi|120407006|ref|YP_956835.1| ribonuclease P [Mycobacterium vanbaalenii PYR-1]
gi|166226727|sp|A1TI29|RNPA_MYCVP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119959824|gb|ABM16829.1| ribonuclease P protein component [Mycobacterium vanbaalenii PYR-1]
Length = 119
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNN-NSNLLPRVGFTVTKKQGCAVERN 58
+ + + +F V KG P + L ++ ++ PRVG V+K G AV+R+
Sbjct: 2 LPAQHRMTRSTEFGATVSKGTRAAQPDVVVYRLRSDQTADPGPRVGLIVSKAVGNAVQRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
R+ RRL+ A E + V+ A + L + R ++ +
Sbjct: 62 RVSRRLRHAALAVLEDLDPSD-RVVIRALPRSRDAVTPRLEQELRTALERIRQRTGAPS 119
>gi|293380889|ref|ZP_06626925.1| putative ribonuclease P protein component [Lactobacillus crispatus
214-1]
gi|295693885|ref|YP_003602495.1| ribonuclease p protein component [Lactobacillus crispatus ST1]
gi|290922562|gb|EFD99528.1| putative ribonuclease P protein component [Lactobacillus crispatus
214-1]
gi|295031991|emb|CBL51470.1| Ribonuclease P protein component [Lactobacillus crispatus ST1]
Length = 122
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYKVEKTENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDE-EKLQINPHVDFLIITRPYARDFNMAQVRKNLLHALSLAHIIEEMPDK 118
Query: 119 FSRK 122
K
Sbjct: 119 VEEK 122
>gi|304390478|ref|ZP_07372431.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315657687|ref|ZP_07910569.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|304326234|gb|EFL93479.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315492159|gb|EFU81768.1| ribonuclease P protein component [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 127
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 2/124 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGRHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR + V AK + + +L N +R+ + ++F
Sbjct: 62 VKRRLRHLVRDRITEFPAGSLN-VFYAKAGIAEVDYPQLENQIQILLRKMAHKQHGDRDF 120
Query: 120 SRKS 123
S
Sbjct: 121 VSPS 124
>gi|226309518|ref|YP_002769480.1| ribonuclease P protein component [Rhodococcus erythropolis PR4]
gi|259494113|sp|C0ZVP7|RNPA_RHOE4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226188637|dbj|BAH36741.1| ribonuclease P protein component [Rhodococcus erythropolis PR4]
Length = 126
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGCAVERN 58
L++ F+ V++G + + +N PR G V+K G AV R+
Sbjct: 7 RLRRHADFSVAVRRGRRMGRRDLVVHAFDREQVEALVVTNHGPRFGLIVSKAVGPAVIRH 66
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+ RRL+ V D V+ A A EL + +
Sbjct: 67 RVARRLRHICADFVGQVSPE-TDVVIRALPGAATASSAELAKQLRGGLTKM 116
>gi|90413738|ref|ZP_01221726.1| ribonuclease P [Photobacterium profundum 3TCK]
gi|90325207|gb|EAS41704.1| ribonuclease P [Photobacterium profundum 3TCK]
Length = 118
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
S L + V + P ++ L N PR+G V KKQ A RN
Sbjct: 7 SRELRLLTPEHYKKVFQQAHRAGSPHLTI--LARPNDLNHPRLGLAVPKKQIKTAPGRNH 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R ++E+ RL + +D+V+IAK+ A + +EL + R R
Sbjct: 65 FKRIVRESFRLKQHDL--PANDFVVIAKKSASELSNEELFKLLDKLWHRLSRPSR 117
>gi|332971201|gb|EGK10164.1| ribonuclease P protein component [Desmospora sp. 8437]
Length = 106
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
F + + R+G +V++K G AV RNR++R +KE R + + D
Sbjct: 2 ANRQFVVY-RSVRKEEGPVRIGISVSRKVGNAVTRNRIKRLVKEITRRWVDSL-PPDTDL 59
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRN 109
+LIA++ A + F + + + +
Sbjct: 60 ILIARKPAADMDFHRMKSSLSHLMNKA 86
>gi|315446825|ref|YP_004079704.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
gi|315265128|gb|ADU01870.1| ribonuclease P protein component [Mycobacterium sp. Spyr1]
Length = 124
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQGCAVERN 58
+ + + +F V +G P L L ++ + PRVG V+K G AV R+
Sbjct: 2 LPAQYRMTRSTEFGATVSRGTRAAQPDLVLYTLRSDETGAPGPRVGLIVSKAVGNAVVRH 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R+ RRL+ A R E + V+ A + + + R + +N
Sbjct: 62 RVSRRLRHAARGILERLDSRD-RVVIRALPRSRDAGTQRFEQELHTALDRIHARTITARN 120
>gi|229491115|ref|ZP_04384943.1| ribonuclease P protein component [Rhodococcus erythropolis SK121]
gi|229321853|gb|EEN87646.1| ribonuclease P protein component [Rhodococcus erythropolis SK121]
Length = 126
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 6 ILKKRRQFA-LVKKGELRKGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGCAVERN 58
L++ F+ V++G + + +N PR G V+K G AV R+
Sbjct: 7 RLRRHADFSVAVRRGRRMGRRDLVVHAFDREQVEALVVTNHGPRFGLIVSKAVGPAVIRH 66
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+ RRL+ V D V+ A A EL + +
Sbjct: 67 RVARRLRHICADFVGQVSPE-TDVVIRALPGAATASSAELAKQLRGGLTKM 116
>gi|160902080|ref|YP_001567661.1| ribonuclease P protein component [Petrotoga mobilis SJ95]
gi|189043741|sp|A9BJC4|RNPA_PETMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160359724|gb|ABX31338.1| ribonuclease P protein component [Petrotoga mobilis SJ95]
Length = 118
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+ +R F V KG F + + N R+ V +K G AV RN +
Sbjct: 7 KKKERLRLKRNFKNVFEKGGRLIDNNFVIIYVPNTMDYN--RIAVIVNRKFGNAVVRNLI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
+R ++E R + G+D+V I +++ I + ++ N ++ VR+ +
Sbjct: 65 KRYIREIYRTN-KTFFPLGYDFVFIPRKELSKNFKGIDYSQIKNQILKLVRKLE 117
>gi|260893981|ref|YP_003240078.1| ribonuclease P protein component [Ammonifex degensii KC4]
gi|260866122|gb|ACX53228.1| ribonuclease P protein component [Ammonifex degensii KC4]
Length = 110
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M + R F+ + + R + N R+GF V+KK AV++NR+
Sbjct: 1 MRRKRKVLSRNDFSAIFREGRRVVGRRVVVYF-RPNQLDFYRLGFAVSKKVKTAVKKNRV 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RR L+E RL + + G DYVL+ + A + E+ E +RR
Sbjct: 60 RRLLREVCRLN-PELFRPGFDYVLLGREGAEESSYWEIEEDVREALRR 106
>gi|46397713|sp|Q7X5K8|RNPA_THESC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908464|gb|AAO88975.1| RNase P protein subunit [Thermus scotoductus]
Length = 162
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F +++G + +G F +++ L + RVG V+KK G AV RNR++
Sbjct: 60 KLLSLKGDRAFQRLRQGRMGRGRFLNVKWLPASE----LRVGIVVSKKVGKAVVRNRIK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + ++IA +A + EL + ++++
Sbjct: 115 ---RRLREILRRLHLPKAHLLVIASPEAREATYAELFQDLIRALKKS 158
>gi|284007061|emb|CBA72336.1| ribonuclease P protein component [Arsenophonus nasoniae]
Length = 117
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L R F V + R + +L N PR+G T+ K A ERNR+
Sbjct: 5 PRELRLLTPRHFDYVFQQPQRASSP-EITILGRLNELGYPRIGLTIAKKNVKRAHERNRI 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E RL + D+V++ ++ + +E+ + RR+ R
Sbjct: 64 KRLTREYFRLHQHEL--PSMDFVILVRKGVADLNNQEITETLGKLWRRHCRLARGS 117
>gi|304322172|ref|YP_003855815.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
gi|303301074|gb|ADM10673.1| putative inner membrane protein translocase component YidC
[Parvularcula bermudensis HTCC2503]
Length = 112
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S + L KRR F +++G P F L+V N+ S R+GFTVTKK G AV RNR++
Sbjct: 4 SRVERLTKRRDFLSLRRGRRINRPTFLLQVAPNDLS--ATRIGFTVTKKHGNAVRRNRLK 61
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRL+ AV + +K G+D IA+ P+ L + +
Sbjct: 62 RRLRAAVESLSSSSVKPGYDLNFIARPALGARPWPLLLDDVRGAL 106
>gi|26250445|ref|NP_756485.1| ribonuclease P [Escherichia coli CFT073]
gi|29427783|sp|Q8FBV5|RNPA_ECOL6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|26110875|gb|AAN83059.1|AE016769_174 Ribonuclease P protein component [Escherichia coli CFT073]
Length = 119
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGP 119
>gi|89074707|ref|ZP_01161165.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90581129|ref|ZP_01236928.1| ribonuclease P [Vibrio angustum S14]
gi|89049471|gb|EAR55032.1| ribonuclease P [Photobacterium sp. SKA34]
gi|90437650|gb|EAS62842.1| ribonuclease P [Vibrio angustum S14]
Length = 118
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
S L + V + P ++ L +N PR+G V KKQ AV+RNR
Sbjct: 7 SRELRLLTPEHYKTVFQQAHRAGSPHLTI--LARSNELNCPRLGLAVPKKQIKTAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R ++E+ RL + D+V+IAK+ A + +EL + R R
Sbjct: 65 FKRIVRESFRLKQHQL--PAKDFVVIAKKSANELSNEELFKLLDKLWHRLSRPSR 117
>gi|218248783|ref|YP_002374154.1| ribonuclease P [Cyanothece sp. PCC 8801]
gi|226736858|sp|B7K5U5|RNPA_CYAP8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|218169261|gb|ACK67998.1| ribonuclease P protein component [Cyanothece sp. PCC 8801]
Length = 127
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVT-KKQGCAV 55
+ + LK R+F V +G+ + L VL + ++ + G ++ K AV
Sbjct: 3 LPKLNRLKSPREFQAVYQRGQRYQSDRLVLRVLWITDKTSNPAPTQFGIAISQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K A+R+ + G V+ + + ++ + + + K
Sbjct: 63 VRNRLKRQIKGAIRVLLP-FIAPGAKIVISVRGNVSECQYEHFLRELKKLLIKAK 116
>gi|269797067|ref|YP_003316522.1| ribonuclease P protein component [Sanguibacter keddieii DSM 10542]
gi|269099252|gb|ACZ23688.1| ribonuclease P protein component [Sanguibacter keddieii DSM 10542]
Length = 91
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+ V + + P VGF V+K G AV RN+++RR++ V + + G V+ A
Sbjct: 1 MVVHVAASGCAEDAPSVGFVVSKAVGNAVVRNKVKRRMRALVAERLDTL-PQGSLVVVRA 59
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+ + L + R+
Sbjct: 60 LPASADAEYARLSGDLDSCLSRSLSRQQRS 89
>gi|149919111|ref|ZP_01907595.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
gi|149820041|gb|EDM79462.1| ribonuclease P protein component [Plesiocystis pacifica SIR-1]
Length = 195
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 28/134 (20%)
Query: 6 ILKKRRQFALVKKG-ELRKGPFFSLEVLNNNN--------------------------SN 38
LK+RR+F V++G F + S
Sbjct: 11 RLKQRREFLRVQRGGRKIHVRHFMVFSSPRRTVKTQPAPKRGGGGDADGEGRPVPDSSSL 70
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R G TVT+K G AV RNR++R ++E R + G D V +AK+ A F +
Sbjct: 71 PPTRCGITVTRKVGNAVVRNRIKRLVREVFRQNRTRL-PPGLDIVWVAKQQAAEANFSAV 129
Query: 99 CNHFVERVRRNKRS 112
F + +R+
Sbjct: 130 QADFERLLVELERA 143
>gi|86160775|ref|YP_467560.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777286|gb|ABC84123.1| ribonuclease P protein component [Anaeromyxobacter dehalogenans
2CP-C]
Length = 116
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L++RR+F V++ G + L + + PR+G TV+ K G AVERNR
Sbjct: 3 LPKAARLRRRREFLQVQQHGRRLYSGDVLVLALVSGS--PRPRIGITVSSKVGNAVERNR 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++R ++EA R D V+IA+ AL +
Sbjct: 61 VKRWVREAWREIRPEF--PPVDLVVIARPAALRM 92
>gi|193078406|gb|ABO13386.2| RNase P [Acinetobacter baumannii ATCC 17978]
Length = 130
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Query: 11 RQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
+ V G L K L R+G V KK A ERNR++R +E+ R
Sbjct: 16 ADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLARESFR 75
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
L D V++ K I EL ++ +R
Sbjct: 76 LHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 120
>gi|261868620|ref|YP_003256542.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293391844|ref|ZP_06636178.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261413952|gb|ACX83323.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290952378|gb|EFE02497.1| ribonuclease P protein component [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 111
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ F V + R G + +L N PR+G TV K A +RNR++R +
Sbjct: 1 MLTPEHFKYVFQQPSRAGSP-EITILARQNHLEHPRLGLTVAKKHLKRAHDRNRIKRLCR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E+ RL + +D+V++AK+ + + L + +R+ R +
Sbjct: 60 ESFRLAQHDL--PNYDFVIVAKQGIGVLNNRTLWQTLDKLWQRHIRLAQKSSS 110
>gi|28896778|ref|NP_796383.1| ribonuclease P [Vibrio parahaemolyticus RIMD 2210633]
gi|153838497|ref|ZP_01991164.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|260876538|ref|ZP_05888893.1| ribonuclease P protein component [Vibrio parahaemolyticus AN-5034]
gi|260897405|ref|ZP_05905901.1| ribonuclease P protein component [Vibrio parahaemolyticus Peru-466]
gi|260901107|ref|ZP_05909502.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
gi|31340402|sp|Q87TR4|RNPA_VIBPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28804986|dbj|BAC58267.1| ribonuclease P protein component [Vibrio parahaemolyticus RIMD
2210633]
gi|149748120|gb|EDM58979.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ3810]
gi|308087931|gb|EFO37626.1| ribonuclease P protein component [Vibrio parahaemolyticus Peru-466]
gi|308090349|gb|EFO40044.1| ribonuclease P protein component [Vibrio parahaemolyticus AN-5034]
gi|308108174|gb|EFO45714.1| ribonuclease P protein component [Vibrio parahaemolyticus AQ4037]
Length = 118
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ NN PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNKLSHPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 69 ARESFRNSQHQL--PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|332533702|ref|ZP_08409561.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036866|gb|EGI73327.1| ribonuclease P protein component [Pseudoalteromonas haloplanktis
ANT/505]
Length = 140
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L ++ + PFF+L L N PR+G TV K+ A +RNR++R
Sbjct: 11 RLLTPSHYSRIFNEPARAATPFFTL--LAKPNDQEKPRLGLTVAKKRVKKACQRNRIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ RL + D VL+ K +EL + R+
Sbjct: 69 ARESFRLNQHSID--NIDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|184202002|ref|YP_001856209.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
gi|238689215|sp|B2GJF5|RNPA_KOCRD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|183582232|dbj|BAG30703.1| ribonuclease P protein component [Kocuria rhizophila DC2201]
Length = 113
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++ F+ V+ G + V + + RVGF V+K G AV RN+
Sbjct: 2 LPTRHRMRTSAHFSTTVRSGARGGRRNVVVSVRLS--TGAPSRVGFVVSKAVGNAVTRNK 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++RRL+E G D V+ A A P+ EL + V R
Sbjct: 60 VKRRLRELSAETVRER-PEGMDLVVRALPPAATAPWDELARDYRSAVATAVRR 111
>gi|283480421|emb|CAY76337.1| RNase P, protein component [Erwinia pyrifoliae DSM 12163]
Length = 119
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R +E+ RL + D+V++AK+ + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCRLAR 117
>gi|152979766|ref|YP_001345395.1| ribonuclease P protein component [Actinobacillus succinogenes 130Z]
gi|150841489|gb|ABR75460.1| ribonuclease P protein component [Actinobacillus succinogenes 130Z]
Length = 124
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L F V + + P ++ L +NS PR+G TV K A +RNR++R
Sbjct: 13 RLLAPEHFRHVFQNPQRASTPEVTI--LARSNSVGNPRLGLTVAKKHLKRAHDRNRIKRL 70
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+E+ RL + +D+V++AK + + +R+ R +
Sbjct: 71 CRESFRLLQHEL--PNYDFVIVAKAGIGKLDNSTFTASLAKLWQRHIRLAKKSSS 123
>gi|332873305|ref|ZP_08441260.1| ribonuclease P protein component [Acinetobacter baumannii 6014059]
gi|332738511|gb|EGJ69383.1| ribonuclease P protein component [Acinetobacter baumannii 6014059]
Length = 130
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 RIHCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 71 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 120
>gi|160932430|ref|ZP_02079820.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
gi|156868389|gb|EDO61761.1| hypothetical protein CLOLEP_01265 [Clostridium leptum DSM 753]
Length = 114
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
LK+ + F + +G+ P V+ N R+GFT +KK G AV+RNR RR
Sbjct: 7 FTTLKENKDFRRLYHRGKSYVSPVLVTYVMKNR--KAGLRIGFTTSKKIGIAVQRNRSRR 64
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++EA RL A + K G+D+V +A+ F+ + + ++++
Sbjct: 65 IMREAFRLIAPEL-KTGYDFVFVARGKTPFVKCEAVKRAMTKQLK 108
>gi|323493775|ref|ZP_08098893.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
gi|323311909|gb|EGA65055.1| ribonuclease P [Vibrio brasiliensis LMG 20546]
Length = 118
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ N+ S+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIARKNSLSH--PRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 69 ARESFRNNQHQLANK--DFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 117
>gi|169832374|ref|YP_001718356.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
gi|169639218|gb|ACA60724.1| ribonuclease P protein component [Candidatus Desulforudis
audaxviator MP104C]
Length = 109
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
I +KK R + V + + N R G TV++K G AV RNR+RRR
Sbjct: 3 IITIKKNRDYRQVFTRGRYRSDRLLVLYRMA-NGTGGRRFGITVSRKLGGAVVRNRVRRR 61
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
LKE RL G+DYV++A+ A + L + ++ V K
Sbjct: 62 LKEICRLN-PEAFPSGYDYVIVARPPAAECDHRVLTDSLLQLVGNIKN 108
>gi|315128188|ref|YP_004070191.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas sp. SM9913]
gi|315016701|gb|ADT70039.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(protein C5) [Pseudoalteromonas sp. SM9913]
Length = 141
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L ++ + PFF+L L + PR+G TV K+ A +RNR++R
Sbjct: 11 RLLTPSHYSRIFNEPARAATPFFTL--LAKPSDQSKPRLGLTVAKKRVKKACQRNRIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ RL + D VL+ K +EL + R+
Sbjct: 69 ARESFRLNQHTLD--NIDIVLMVKSGIDEQSNEELTKQLTKLWRKINER 115
>gi|188535564|ref|YP_001909361.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|292490138|ref|YP_003533033.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|292901142|ref|YP_003540511.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|238689718|sp|B2VCE5|RNPA_ERWT9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188030606|emb|CAO98501.1| Ribonuclease P protein component [Erwinia tasmaniensis Et1/99]
gi|291200990|emb|CBJ48129.1| ribonuclease P protein component [Erwinia amylovora ATCC 49946]
gi|291555580|emb|CBA24177.1| RNase P, protein component [Erwinia amylovora CFBP1430]
gi|312174331|emb|CBX82584.1| RNase P, protein component [Erwinia amylovora ATCC BAA-2158]
Length = 119
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCRLARGS 119
>gi|156936083|ref|YP_001439999.1| ribonuclease P [Cronobacter sakazakii ATCC BAA-894]
gi|166226718|sp|A7MN01|RNPA_ENTS8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156534337|gb|ABU79163.1| hypothetical protein ESA_03977 [Cronobacter sakazakii ATCC BAA-894]
Length = 119
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AKR + +EL + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PPMDFVVVAKRGIADLDNRELSEALEKLWRRHCRLVRGS 119
>gi|227498800|ref|ZP_03928940.1| ribonuclease P [Acidaminococcus sp. D21]
gi|226904252|gb|EEH90170.1| ribonuclease P [Acidaminococcus sp. D21]
Length = 140
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ +K F + KG+ + L + + ++G V KK G AV RN++
Sbjct: 32 TQAHRVKAHEDFQKIHDKGQSVVDGYGVFYFLPSP--HDHSQLGTAVGKKLGNAVLRNKI 89
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR++E R + K V +A+R PF F+ ++
Sbjct: 90 KRRMRETFRQHQYRLKKP-VSIVWVARRRLAHAPFAMYETVFLRLAKKA 137
>gi|257061842|ref|YP_003139730.1| ribonuclease P [Cyanothece sp. PCC 8802]
gi|256592008|gb|ACV02895.1| ribonuclease P protein component [Cyanothece sp. PCC 8802]
Length = 127
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVT-KKQGCAV 55
+ + LK ++F V +G+ + L V+ + ++ + G +V+ K AV
Sbjct: 3 LPKVNRLKSPKEFQAVYQRGQRYQSDRLVLRVIWITDKTSTPEPTQFGISVSQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K A+R+ + G V+ + ++ + + + K
Sbjct: 63 VRNRLKRQIKGAIRVLLP-FITPGAKIVISVRGTLSECQYEHFLRELKKLLIKAK 116
>gi|254362248|ref|ZP_04978362.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261492908|ref|ZP_05989454.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496742|ref|ZP_05993117.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153093823|gb|EDN74758.1| ribonuclease P [Mannheimia haemolytica PHL213]
gi|261307581|gb|EEY08909.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311449|gb|EEY12606.1| ribonuclease P [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 124
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 1 MSNIC-----ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGC 53
M + L QF V + P +L L N+ PR+G TV K
Sbjct: 1 MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTL--LARENNLENPRLGLTVAKKHLKR 58
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A +RNR++R ++E+ RL + D+V +AK + L + R+ R
Sbjct: 59 AHDRNRIKRIVRESFRLKQHEL--PNFDFVFVAKGGIGKLDNATLFETLEKLWSRHIRLS 116
Query: 114 YSGKNFS 120
+
Sbjct: 117 KKPAQQN 123
>gi|123444345|ref|YP_001008310.1| ribonuclease P [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|166228260|sp|A1JT84|RNPA_YERE8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122091306|emb|CAL14192.1| ribonuclease P protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 119
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++ K+ + + L + RR+ R +
Sbjct: 65 IKRLARESFRLHQHTL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPAS 119
>gi|134103816|ref|YP_001109477.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
gi|133916439|emb|CAM06552.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
Length = 147
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ +S+ RVGF V+K G AV R+R+ R+L+ +R + G V+ A
Sbjct: 50 VHTAPTRDSSESTRVGFVVSKAVGSAVVRHRVARQLRHLMRDRIPAL-PAGTLVVVRALP 108
Query: 89 DALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A P ++L +R+ + + + +R
Sbjct: 109 PAAGAPSRDLGADLDAALRKLRLTGTRAEGAAR 141
>gi|227328547|ref|ZP_03832571.1| ribonuclease P [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 119
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R +E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLHQHSL--PSMDFVVLVKKGVSELDNRTLTEALEKLWRRHCR 114
>gi|254445016|ref|ZP_05058492.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
gi|198259324|gb|EDY83632.1| ribonuclease P protein component [Verrucomicrobiae bacterium
DG1235]
Length = 135
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQGCAVERNRMR 61
L++ F ++ G+ + +F+L + PR+G + ++ G +V RN+++
Sbjct: 12 RLRRNADFLAIRGHGKPYRCQYFALFSRIRASEGADVSSPRIGISAARRVGNSVTRNKIK 71
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RR +E RL + + D VL ++ A ++EL F+ ++
Sbjct: 72 RRFRELFRLHQHDI-RPEADIVLSLRQPAGNASYEELEQRFLHALK 116
>gi|170729249|ref|YP_001763275.1| ribonuclease P [Shewanella woodyi ATCC 51908]
gi|254808086|sp|B1KQ67|RNPA_SHEWM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169814596|gb|ACA89180.1| ribonuclease P protein component [Shewanella woodyi ATCC 51908]
Length = 119
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V + K + +L N+ PR+G TV K+ A +RNR++R +
Sbjct: 12 RLLTPAQFKSVFS-KPIKASSAEITLLAIPNTEQHPRIGLTVAKRFVKKAHQRNRIKRII 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + + + EL + R+ R
Sbjct: 71 RDNFRLHQHEL--PAIDIVVLVRNGVVEMENAELHKLVEKLWRKLNRR 116
>gi|325294816|ref|YP_004281330.1| ribonuclease P protein component [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065264|gb|ADY73271.1| Ribonuclease P protein component [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 121
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L+K+ F V ++ +N+ PR GF +KK AV+RNR
Sbjct: 10 KKHERLRKQSDFKRVFDSGK-SLGGVTVAFYFVSNNVDYPRAGFIASKKISKRAVDRNRA 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E RL + D + IA++ L + ++ + F++ ++
Sbjct: 69 KRLMREVFRLNKHKLKP--VDIIFIARKGILGKKYHDVESDFLKLAKKA 115
>gi|298345818|ref|YP_003718505.1| ribonuclease P [Mobiluncus curtisii ATCC 43063]
gi|298235879|gb|ADI67011.1| ribonuclease P [Mobiluncus curtisii ATCC 43063]
Length = 127
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 2/124 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGCHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR G V AK + + +L N +R+ + ++F
Sbjct: 62 VKRRLRHLVRDRITE-FPAGSLNVFYAKAGIAEVDYPQLENQIQILLRKMAHKQHGDRDF 120
Query: 120 SRKS 123
S
Sbjct: 121 VSPS 124
>gi|139439860|ref|ZP_01773225.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
gi|133774788|gb|EBA38608.1| Hypothetical protein COLAER_02259 [Collinsella aerofaciens ATCC
25986]
Length = 112
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K R+ F V +G P + + + RV F K+ GCAV RNR +R
Sbjct: 1 MKTIKSRQDFEHVFSQGRRFNHPLIRMTICESVGEGDSGRVAFVGAKRLGCAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++EA R C G G+D +L A +E+ ++R
Sbjct: 61 VMREAARSC--GFPVAGYDIILFATPKTRVSSPQEMDKALRSLMKRA 105
>gi|86610361|ref|YP_479123.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123500626|sp|Q2JHS3|RNPA_SYNJB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|86558903|gb|ABD03860.1| ribonuclease P [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 133
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 5 CILKKRRQFALVKKGE-LRKGPFFSLEV--LNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L+ RR F + +G R G +L + + +VG + +K AV+RNR+
Sbjct: 6 HRLRDRRAFQALYQGGQRRSGAGLTLLFQPMPAGCEGIPSQVGLVIGRKVSKSAVKRNRL 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR+L+E +R + K G+ + I+K + L + EL +++
Sbjct: 66 RRQLREILRPLCPNL-KPGYRLLFISKANLLTYRWPELRAEVHRLLQKA 113
>gi|157368279|ref|YP_001476268.1| ribonuclease P [Serratia proteamaculans 568]
gi|270264117|ref|ZP_06192384.1| ribonuclease P protein component [Serratia odorifera 4Rx13]
gi|166991080|sp|A8G7Q0|RNPA_SERP5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157320043|gb|ABV39140.1| ribonuclease P protein component [Serratia proteamaculans 568]
gi|270041766|gb|EFA14863.1| ribonuclease P protein component [Serratia odorifera 4Rx13]
Length = 119
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNQLGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGIADLDNRALTEALEKLWRRHCRQAPAS 119
>gi|51244706|ref|YP_064590.1| ribonuclease P, protein component [Desulfotalea psychrophila LSv54]
gi|60390371|sp|Q6APZ0|RNPA_DESPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|50875743|emb|CAG35583.1| related to Ribonuclease P, protein component [Desulfotalea
psychrophila LSv54]
Length = 120
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K ++ V +G G F++ L N+ N R+G +V +K AV+RNR
Sbjct: 6 LPKTAFVRKGWEYDAVYRGGRRLHGVGFTIIYLLNSTENN--RLGISVHRKLRGAVKRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
++R ++E RL + D V + +++
Sbjct: 64 IKRIIRECFRLH-RDIFPQKADIVFAVRPGFALSSPEQIRQAVGSL 108
>gi|78357439|ref|YP_388888.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|123741238|sp|Q30YQ3|RNPA_DESDG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78219844|gb|ABB39193.1| ribonuclease P protein component [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 125
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L +R + G F + L + + R G V++K G AV RNR
Sbjct: 2 LARPSRLTRRPDYVACYNTGRRYFSKHFIVFALEREGAAPVWRYGLAVSRKVGDAVRRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+R L+E RL + + G D V++ KR
Sbjct: 62 TKRVLREFFRLYQDDM-PGGMDLVVVPKR 89
>gi|46397717|sp|Q7X5L6|RNPA_THEBO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908452|gb|AAO88967.1| RNase P protein subunit [Thermus brockianus]
Length = 162
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG+ +G + S++ L RVG V+KK G AV RN+++
Sbjct: 60 KLVSLKGDRAFQRLRKGKAGRGRYVSVKWLPAPE----LRVGIVVSKKVGKAVVRNKVK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A + EL ++++
Sbjct: 115 ---RRLREILRRLHLPKAHLLVVASPEAREASYVELFQDVARALKKS 158
>gi|114565215|ref|YP_752729.1| ribonuclease P protein component [Shewanella frigidimarina NCIMB
400]
gi|122298222|sp|Q07VS4|RNPA_SHEFN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114336508|gb|ABI73890.1| ribonuclease P protein component [Shewanella frigidimarina NCIMB
400]
Length = 118
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
S L QF V K + +L NS PR+G TV K+ A +RNR+
Sbjct: 7 SRELRLLTPAQFKSVFSNP-IKASSAEITLLAIPNSEQHPRLGLTVAKRFVKRANQRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R ++++ RL + D V++ + + + EL + R+ R
Sbjct: 66 KRVIRDSFRLHQHDI--PDIDIVVLVRNGVMEMENAELHKLIEKLWRKLSRR 115
>gi|291277162|ref|YP_003516934.1| ribonuclease P protein component [Helicobacter mustelae 12198]
gi|290964356|emb|CBG40206.1| ribonuclease P protein component [Helicobacter mustelae 12198]
Length = 109
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK ++ F V K G+ F + VL N +G +V+KK G A RN+++R
Sbjct: 1 MQSLKTKQDFDFVYKRGKRIYAKSFLIYVLKNQKQETF--LGLSVSKKIGIACRRNQIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R + L + +++ K + L F +L N F++ ++
Sbjct: 59 RFRAICHLHQNKL--QSLSLIIVPKIEILASSFSDLENDFLKCIK 101
>gi|84394510|ref|ZP_00993220.1| ribonuclease P [Vibrio splendidus 12B01]
gi|148982292|ref|ZP_01816699.1| ribonuclease P [Vibrionales bacterium SWAT-3]
gi|84374863|gb|EAP91800.1| ribonuclease P [Vibrio splendidus 12B01]
gi|145960557|gb|EDK25914.1| ribonuclease P [Vibrionales bacterium SWAT-3]
Length = 118
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V K P F++ NNS PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFKQAHRAGSPHFTIIA--RNNSLSNPRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ + R R
Sbjct: 69 TRESFRNTQHKL--PNKDFVVIAKKSAQDLSNEEMFKLLDKLWLRLSRPSR 117
>gi|315634813|ref|ZP_07890095.1| ribonuclease P protein component [Aggregatibacter segnis ATCC
33393]
gi|315476365|gb|EFU67115.1| ribonuclease P protein component [Aggregatibacter segnis ATCC
33393]
Length = 111
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ F V + R + +L N PR+G TV K A +RNR++R +
Sbjct: 1 MLTPEHFKYVFQQPSRASSP-EITILARKNHLEHPRLGLTVAKKHLKRAHDRNRIKRLCR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
E+ RL + +D+V++AK+ + + L + +R+ R
Sbjct: 60 ESFRLAQHDL--PNYDFVVVAKQGIGRLDNRTLWQTLDKLWQRHIRLAQKS 108
>gi|237752893|ref|ZP_04583373.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375160|gb|EEO25251.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 105
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 4 ICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L ++ F V + + +F L + R+GF+V+KK G AV RNR++R
Sbjct: 1 MVTLNTKQDFNRVYRSQKRWHNAYFVLFFREDAQQK---RIGFSVSKKVGNAVCRNRIKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RL+ R + G D +L+AK + +K L +++ + R
Sbjct: 58 RLRAIYRESM--LDLRGGDMILLAKNGLDKVAYKTLQSNYKYALIRL 102
>gi|293393719|ref|ZP_06638027.1| ribonuclease P protein component [Serratia odorifera DSM 4582]
gi|291423763|gb|EFE96984.1| ribonuclease P protein component [Serratia odorifera DSM 4582]
Length = 108
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPQRAGTPQITI--LGRLNQLGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLHQHQL--PAMDFVVVAKKGIADLDNRALTEALEKLWRRHCR 103
>gi|291005726|ref|ZP_06563699.1| putative RNase P component [Saccharopolyspora erythraea NRRL 2338]
Length = 134
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ +S+ RVGF V+K G AV R+R+ R+L+ +R + G V+ A
Sbjct: 37 VHTAPTRDSSESTRVGFVVSKAVGSAVVRHRVARQLRHLMRDRIPAL-PAGTLVVVRALP 95
Query: 89 DALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A P ++L +R+ + + + +R
Sbjct: 96 PAAGAPSRDLGADLDAALRKLRLTGTRAEGAAR 128
>gi|222100004|ref|YP_002534572.1| Ribonuclease P protein component [Thermotoga neapolitana DSM 4359]
gi|221572394|gb|ACM23206.1| Ribonuclease P protein component [Thermotoga neapolitana DSM 4359]
Length = 185
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L+ R+ F + K G+ + +F + L N + R+G V +K G A RN++
Sbjct: 74 TRKERLRLRKDFLEIFKEGKSLQNEYFVVLFLKNGLDH--SRLGIVVKRKFGKATRRNKL 131
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNK 110
+R ++E R + + G D V+I ++ + I F+ + + + R +
Sbjct: 132 KRWVRETFRKNKDKI-PKGFDIVVIPRKRLSEEFESINFRVVQKKLLSLLERIE 184
>gi|157964070|ref|YP_001504104.1| ribonuclease P [Shewanella pealeana ATCC 700345]
gi|167626218|ref|YP_001676512.1| ribonuclease P [Shewanella halifaxensis HAW-EB4]
gi|157849070|gb|ABV89569.1| ribonuclease P protein component [Shewanella pealeana ATCC 700345]
gi|167356240|gb|ABZ78853.1| ribonuclease P protein component [Shewanella halifaxensis HAW-EB4]
Length = 120
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V + K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 13 RLLTPAQFKSVFT-KPIKASSAEITLLAIPNSEQHPRLGLTVAKRYVKKANQRNRIKRII 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + L + EL N + R+ R
Sbjct: 72 RDNFRLHQHDL--PAVDIVVLVRNGVLDMENAELKNLVEKLWRKLSRR 117
>gi|325123491|gb|ADY83014.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter calcoaceticus PHEA-2]
Length = 121
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 2 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPKSRLGIVVAKKKVRRAHERNRIKRLA 61
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 62 RESFRLHQPNFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 111
>gi|329297779|ref|ZP_08255115.1| ribonuclease P [Plautia stali symbiont]
Length = 119
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + P ++ L NS PR+G T+ K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPLRAGTPQITI--LGRLNSLGHPRIGLTIAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PPMDFVIVAKKGIADLDNRALTEALEKLWRRHCRLARGS 119
>gi|226362893|ref|YP_002780673.1| ribonuclease P [Rhodococcus opacus B4]
gi|254808084|sp|C1B7S5|RNPA_RHOOB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226241380|dbj|BAH51728.1| ribonuclease P protein component [Rhodococcus opacus B4]
Length = 125
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCAVERN 58
L++ F V++G + + ++ PR G V+K G AV R+
Sbjct: 6 HRLRRHSDFSLTVRRGRRMGRRDLVVHAFDRAQADELVSSGGPRFGLVVSKAVGPAVIRH 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+ RRL+ + V G D V+ A A ++L + R
Sbjct: 66 RVARRLRHICIDLVDSV-PRGTDVVIRALPGAATASSRDLEKQLRAGLLRL 115
>gi|157373145|ref|YP_001471745.1| ribonuclease P protein component [Shewanella sediminis HAW-EB3]
gi|157315519|gb|ABV34617.1| ribonuclease P protein component [Shewanella sediminis HAW-EB3]
Length = 120
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V + K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 13 RLLTPAQFKSVFT-KPIKASSAEITLLAIPNSEQHPRLGLTVAKRFVKKAHQRNRIKRII 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + + + +L + R+ R
Sbjct: 72 RDNFRLHQHEL--PPIDIVVLVRNGVVEMENTDLHKLVEKLWRKLNRR 117
>gi|284034941|ref|YP_003384872.1| ribonuclease P protein component [Kribbella flavida DSM 17836]
gi|283814234|gb|ADB36073.1| ribonuclease P protein component [Kribbella flavida DSM 17836]
Length = 119
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVL-----NNNNSNLLPRVGFTVTKKQGCAVERN 58
L++ F V+ G + ++ RVGF V+K G AV RN
Sbjct: 6 HRLRRSDDFRRAVRSGRRAGRRAVVVHFFSGSGDQAGTADEPARVGFVVSKAVGNAVLRN 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R+ RRL+ + + G V+ A + + EL + +RR
Sbjct: 66 RVHRRLRAVLASRLTEL-PAGSLTVVRALPASASASYAELVDDVDAALRRVLVPR 119
>gi|260595829|ref|YP_003208400.1| ribonuclease P [Cronobacter turicensis z3032]
gi|260215006|emb|CBA26667.1| Ribonuclease P protein component [Cronobacter turicensis z3032]
Length = 119
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AKR + +EL + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PSMDFVVVAKRGIADLDNRELSEALEKLWRRHCRLVRGS 119
>gi|83594666|ref|YP_428418.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
gi|83577580|gb|ABC24131.1| ribonuclease P protein [Rhodospirillum rubrum ATCC 11170]
Length = 174
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNN----------NSNLLPRVGFTVTKKQG 52
+ LK+R F V K P L+ RVGFT +KK G
Sbjct: 54 VGRLKQRADFLRVAGKRCKWAAPGLVLQAAVQPAPRAGRHPALPLPPPIRVGFTTSKKVG 113
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
AVERNR RRRL+ AV L K GHDYV+I + L PF L ++R
Sbjct: 114 NAVERNRARRRLRAAVDLVIATEAKGGHDYVVIGRAATLGRPFDLLVADLRAALKRLGMR 173
Query: 113 Y 113
Sbjct: 174 R 174
>gi|111020653|ref|YP_703625.1| ribonuclease P [Rhodococcus jostii RHA1]
gi|123340330|sp|Q0SAG9|RNPA_RHOSR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110820183|gb|ABG95467.1| ribonuclease P [Rhodococcus jostii RHA1]
Length = 125
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 5 CILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCAVERN 58
L++ F+ V++G + + ++ PR G V+K G AV R+
Sbjct: 6 HRLRRHSDFSMTVRRGRRMGRRDLVVHAFDRAQADELVSSGGPRFGLVVSKAVGPAVIRH 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+ RRL+ V+ G D V+ A A ++L + R
Sbjct: 66 RVARRLRHICIDLV-DVVPRGTDVVIRALPGAATASSRDLEKQLRAGLLRL 115
>gi|52424538|ref|YP_087675.1| ribonuclease P [Mannheimia succiniciproducens MBEL55E]
gi|60390344|sp|Q65VC0|RNPA_MANSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52306590|gb|AAU37090.1| RnpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 122
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L QF V + P ++ L N PR+G TV K A ERNR
Sbjct: 7 SRELRLLTPAQFKYVFEQPLRASTPEITI--LARRNDLQYPRLGLTVAKKHLKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + +D+V++AK + + +R+ R
Sbjct: 65 VKRLCRESFRLLQHEL--PNYDFVIVAKHGIGKLDNPTFTAILSKLWQRHIRLAKKS 119
>gi|37528714|ref|NP_932059.1| ribonuclease P [Photorhabdus luminescens subsp. laumondii TTO1]
gi|48474338|sp|Q7M7H7|RNPA_PHOLL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|36788153|emb|CAE17280.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 119
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L + F V + R + +L N PR+G T+ K A ERNR+
Sbjct: 7 PRELRLLTPKHFTYVFQQPQRASSP-EITILGRPNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E+ RL + D+V++ ++ + + L + RR+ R +
Sbjct: 66 KRLARESFRLNQHEL--PPMDFVVLVRKGVAELDNRALTEALGKLWRRHCRLARAS 119
>gi|58338217|ref|YP_194802.1| ribonuclease P [Lactobacillus acidophilus NCFM]
gi|227902596|ref|ZP_04020401.1| ribonuclease P [Lactobacillus acidophilus ATCC 4796]
gi|67461230|sp|Q5FHQ3|RNPA_LACAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|58255534|gb|AAV43771.1| ribonuclease P [Lactobacillus acidophilus NCFM]
gi|227869685|gb|EEJ77106.1| ribonuclease P [Lactobacillus acidophilus ATCC 4796]
Length = 122
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
M +K + F V G+ F + + + RVG +V KK G AV RN
Sbjct: 1 MRKSYRVKSEKDFQQVFESGDSVANRAFVIYTVEKTENKHF-RVGISVGKKVGHTAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R++R ++ + + + D+++I + A ++ + + +
Sbjct: 60 RLKRYIRAVIDE-EKLRINPHVDFLIITRPYARDFNMIKVRKNLLHALALAH 110
>gi|22127983|ref|NP_671406.1| ribonuclease P [Yersinia pestis KIM 10]
gi|45443731|ref|NP_995270.1| ribonuclease P [Yersinia pestis biovar Microtus str. 91001]
gi|51598230|ref|YP_072421.1| ribonuclease P [Yersinia pseudotuberculosis IP 32953]
gi|108810135|ref|YP_654051.1| ribonuclease P [Yersinia pestis Antiqua]
gi|108814117|ref|YP_649884.1| ribonuclease P [Yersinia pestis Nepal516]
gi|145601172|ref|YP_001165248.1| ribonuclease P [Yersinia pestis Pestoides F]
gi|150260965|ref|ZP_01917693.1| ribonuclease P protein [Yersinia pestis CA88-4125]
gi|153947371|ref|YP_001403097.1| ribonuclease P [Yersinia pseudotuberculosis IP 31758]
gi|218931077|ref|YP_002348952.1| ribonuclease P [Yersinia pestis CO92]
gi|229839807|ref|ZP_04459966.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841892|ref|ZP_04462048.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. India 195]
gi|229896769|ref|ZP_04511932.1| protein C5 component of RNase P [Yersinia pestis Pestoides A]
gi|229904657|ref|ZP_04519768.1| protein C5 component of RNase P [Yersinia pestis Nepal516]
gi|21263944|sp|Q8Z9U4|RNPA_YERPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|60390348|sp|Q663S9|RNPA_YERPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123245361|sp|Q1C0B6|RNPA_YERPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123372802|sp|Q1CCJ6|RNPA_YERPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228261|sp|A4TSL3|RNPA_YERPP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991081|sp|A7FPB9|RNPA_YERP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21961129|gb|AAM87657.1|AE014013_2 RNase P [Yersinia pestis KIM 10]
gi|45438601|gb|AAS64147.1| ribonuclease P protein [Yersinia pestis biovar Microtus str. 91001]
gi|51591512|emb|CAH23184.1| ribonuclease P protein [Yersinia pseudotuberculosis IP 32953]
gi|108777765|gb|ABG20284.1| ribonuclease P protein component [Yersinia pestis Nepal516]
gi|108782048|gb|ABG16106.1| ribonuclease P protein component [Yersinia pestis Antiqua]
gi|115349688|emb|CAL22669.1| ribonuclease P protein [Yersinia pestis CO92]
gi|145212868|gb|ABP42275.1| ribonuclease P protein component [Yersinia pestis Pestoides F]
gi|149290373|gb|EDM40450.1| ribonuclease P protein [Yersinia pestis CA88-4125]
gi|152958866|gb|ABS46327.1| ribonuclease P protein component [Yersinia pseudotuberculosis IP
31758]
gi|229678775|gb|EEO74880.1| protein C5 component of RNase P [Yersinia pestis Nepal516]
gi|229691231|gb|EEO83284.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696173|gb|EEO86220.1| protein C5 component of RNase P [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700207|gb|EEO88243.1| protein C5 component of RNase P [Yersinia pestis Pestoides A]
gi|320017430|gb|ADW01002.1| protein C5 component of RNase P [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 119
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++ K+ + + L + RR+ R +
Sbjct: 65 IKRLTRESFRLHQHAL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCRQAPAS 119
>gi|57239308|ref|YP_180444.1| hypothetical protein Erum5800 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579274|ref|YP_197486.1| hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161387|emb|CAH58311.1| putative ribonuclease P protein component [Ehrlichia ruminantium
str. Welgevonden]
gi|58417900|emb|CAI27104.1| Hypothetical protein ERWE_CDS_06100 [Ehrlichia ruminantium str.
Welgevonden]
Length = 122
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
++ I +KKR F + G L+V+ + + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN+++RR + + G+ Y+LIA +D I F+++ + + ++
Sbjct: 63 RNKVKRRFRVLAESVIVQHARKGYYYILIASKDTPKISFQDMLSRLASYLNTSR 116
>gi|323496922|ref|ZP_08101950.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
gi|323317996|gb|EGA70979.1| ribonuclease P [Vibrio sinaloensis DSM 21326]
Length = 118
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRR 63
L + V + P F++ N+ S+ PR+G V KKQ RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIARKNSLSH--PRLGLAVPKKQIKTAVGRNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + E+ F + +R R
Sbjct: 69 ARESFRNKQHQL--PNKDFVVIAKKSAQDLSNDEMFKLFDKLWQRLSRPSR 117
>gi|291532563|emb|CBL05676.1| ribonuclease P protein component, eubacterial [Megamonas
hypermegale ART12/1]
Length = 121
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ I+K+ F + + G + + +V F KK G AV RNR
Sbjct: 5 LQKKLIVKENSDFQKIYRCGRSLANKNMVMYYCKA--FHPSHKVAFAAGKKLGNAVTRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R L+E RL + K + +L+ + A+ + L F +R +
Sbjct: 63 VKRLLREVYRLHRHEI-KDDYCLLLVGRAAAVDLKSTALEKSFYSLCKRANILKKEVEKK 121
>gi|289450749|ref|YP_003475563.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185296|gb|ADC91721.1| ribonuclease P protein component [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 128
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ + ++KK +F+ V KG+ S+ VL RV + V + G +V RNR
Sbjct: 1 MTKLIVIKKNYEFSRVFRKGKRYIATTLSINVLPRP-RLKYNRVAYAVGRNYGSSVRRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R +EA R A G+D ++ + F+++ + + R +
Sbjct: 60 LKRLAREAYRKYAYSCS-CGYDIIITMRATESLPEFRQVADDLRVLLVRADILREQDEPR 118
Query: 120 SR 121
Sbjct: 119 PE 120
>gi|320157822|ref|YP_004190201.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
gi|319933134|gb|ADV87998.1| ribonuclease P protein component [Vibrio vulnificus MO6-24/O]
Length = 107
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P F++ NN+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQNVFQQAHRAGSPHFTIIA--RNNNLSHPRLGLAVPKKQIKTAVGRNRFKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +EL F + R R
Sbjct: 59 RESFRNTQHQL--PNKDFVVIAKKSAQDLSNEELFKLFDKLWHRLSRPSR 106
>gi|307635187|gb|ADI86222.2| RNase P protein component [Geobacter sulfurreducens KN400]
Length = 114
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L +R F + F + L R+G TV++K G AV RNR+
Sbjct: 5 TKDERLLRRADFLRLSAAARKLHTSSFIV--LWTPGETGRRRIGITVSRKVGTAVVRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E R + + D +IAK+ A + + +C V R
Sbjct: 63 KRLVREYYRHHRDAL--PSIDLNVIAKKGAERLDYHGVCRELDPVVERL 109
>gi|212632923|ref|YP_002309448.1| ribonuclease P [Shewanella piezotolerans WP3]
gi|212554407|gb|ACJ26861.1| Ribonuclease P protein [Shewanella piezotolerans WP3]
Length = 120
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V + K + +L NS PR+G TV K+ A +RN+++R +
Sbjct: 13 RLLTPAQFKSVFT-KPIKASSAEITLLAIPNSEQHPRLGLTVAKRYVKKAHQRNKIKRII 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + L + EL + R+ R
Sbjct: 72 RDNFRLHQHDL--PAVDIVVLVRNGVLDMENAELKKLVEKLWRKLSRR 117
>gi|229822698|ref|YP_002884224.1| ribonuclease P protein component [Beutenbergia cavernae DSM 12333]
gi|259494100|sp|C5C6N8|RNPA_BEUC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229568611|gb|ACQ82462.1| ribonuclease P protein component [Beutenbergia cavernae DSM 12333]
Length = 119
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ +++ +FA + R+G + ++ PRVGF V+K G AV RNR+
Sbjct: 2 LPAANRMRRSDEFARTFRRGTRRGTRRLVVHAATTDAGEPPRVGFVVSKAVGGAVVRNRV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+RRL+ + +L G V+ A + EL +
Sbjct: 62 KRRLRAVLMHRVTDLL-PGTLVVVRALPPSANATSAELERDVDGSL 106
>gi|210634755|ref|ZP_03298283.1| hypothetical protein COLSTE_02210 [Collinsella stercoris DSM 13279]
gi|210158695|gb|EEA89666.1| hypothetical protein COLSTE_02210 [Collinsella stercoris DSM 13279]
Length = 114
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K + F V +G+ P + + + + RV F K+ G AV RNR +R
Sbjct: 1 MQTIKSHQDFERVFTQGKRLNHPLIRMVICDCVSEGDPARVAFAAAKRLGNAVVRNRSKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+EA R C + G + +L A +E+ +RR + + S ++
Sbjct: 61 VLREAARSCQ--LPIEGREIILFATPRTRSASPEEMREALQTLLRRARVAAPSARS 114
>gi|41410447|ref|NP_963283.1| ribonuclease P [Mycobacterium avium subsp. paratuberculosis K-10]
gi|22001935|sp|Q9L7L9|RNPA_MYCPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|6969274|gb|AAF33695.1| rnpA [Mycobacterium avium subsp. paratuberculosis]
gi|41399281|gb|AAS06899.1| RnpA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 119
Score = 68.6 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
+ + + +F VK G P + + ++ + PRVG V K G AV+
Sbjct: 2 LPARNRMTRSTEFDATVKHGTRMAQPDIVVHLRRGSEPDDESAGPRVGLVVGKAVGTAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 RHRVARRLRHVARPLLGELQPSD-RLVIRALPGSRTVSSARLAQELQRCLRRM 113
>gi|289662286|ref|ZP_06483867.1| ribonuclease P [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 145
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDP--LLSLHWRIGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|254000531|ref|YP_003052594.1| ribonuclease P [Methylovorus sp. SIP3-4]
gi|253987210|gb|ACT52067.1| ribonuclease P protein component [Methylovorus sp. SIP3-4]
Length = 125
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 6/118 (5%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
+ K F+ V + G + ++ N S PR+G V KK AV+RN M+R
Sbjct: 12 VRIIKTDDFSSVFNFRKRISGHYLAIHYQYN--SLDTPRLGLIVGKKIAKRAVDRNYMKR 69
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
L+E RL + D V+ +R + L F E +++ + K+ S
Sbjct: 70 VLREQFRLHQHDIA--SLDLVVRVQRAYEPGDYPSLVGEFCELLQKLGKQIEKRKSMS 125
>gi|58617328|ref|YP_196527.1| hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
gi|58416940|emb|CAI28053.1| Hypothetical protein ERGA_CDS_06010 [Ehrlichia ruminantium str.
Gardel]
Length = 122
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN---NNNSNLLPRVGFTVTKKQGCAVE 56
++ I +KKR F + G L+V+ + + RVGFTV+KK G AV
Sbjct: 3 LNGIVTIKKREDFLFAQHNGCFIGSFGLFLQVVRESSKPLQHDVIRVGFTVSKKVGNAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN+++RR + + G+ Y+LIA +D I F+++ + + ++
Sbjct: 63 RNKVKRRFRVLAESVMVQHARKGYYYILIASKDTPKISFQDMLSRLASYLNTSR 116
>gi|84497196|ref|ZP_00996018.1| ribonuclease P protein [Janibacter sp. HTCC2649]
gi|84382084|gb|EAP97966.1| ribonuclease P protein [Janibacter sp. HTCC2649]
Length = 90
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
PRVGF V+K G AV RNR +RRL+ A+ G+ G D V+ A+ A F EL
Sbjct: 14 PPRVGFVVSKAVGNAVVRNRTKRRLRAAIATELTGI-PTGLDVVVRAQPAAASATFAELS 72
Query: 100 NHFVERVRRNKRS 112
+ + R
Sbjct: 73 ESLKPLLHKVIRR 85
>gi|59710611|ref|YP_203387.1| ribonuclease P [Vibrio fischeri ES114]
gi|67461223|sp|Q5E8Z7|RNPA_VIBF1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59478712|gb|AAW84499.1| ribonuclease P protein component [Vibrio fischeri ES114]
Length = 117
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNR 59
S L + V K P F++ L NS PR+G V KKQ RN+
Sbjct: 6 SRELRLLTPEDYKFVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNK 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R ++E+ R + D+V+IAK+ A + ++ + R R
Sbjct: 64 FKRIVRESFRNKQHSL--PAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|209965567|ref|YP_002298482.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
gi|209959033|gb|ACI99669.1| ribonuclease P protein component, putative [Rhodospirillum centenum
SW]
Length = 179
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNN------SNLLPRVGFTVTKKQGCAVE 56
+ L +R QF V P L+ ++ RVGFT +KK G AVE
Sbjct: 24 VGRLTRRPQFLAVAGARRKWAAPGLILQARAHDERQHPRPDEPSVRVGFTASKKVGGAVE 83
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RNR RRRL+ AV G+D+VL+A+ + + P+ +L N ++R K
Sbjct: 84 RNRARRRLRAAVAEVLAPHAAAGYDFVLVARGETVRRPWPDLKNDLATALKRLKAWR 140
>gi|256826458|ref|YP_003150418.1| ribonuclease P protein component [Kytococcus sedentarius DSM 20547]
gi|256689851|gb|ACV07653.1| ribonuclease P protein component [Kytococcus sedentarius DSM 20547]
Length = 93
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
++ RVGF V+K+ G +V R+R++RRL+ V + GHD V+ A A
Sbjct: 13 DSTTDPHPVRVGFVVSKQVGNSVVRSRVQRRLRHVVAERLSEL-PVGHDLVVRAHPAAAT 71
Query: 93 IPFKELCNHFVERVRRNKRS 112
+ L ++R +
Sbjct: 72 AEWGRLVADLDRCLQRARPR 91
>gi|308810481|ref|XP_003082549.1| RNPA_PSEAO Ribonuclease P protein component (ISS) [Ostreococcus
tauri]
gi|116061018|emb|CAL56406.1| RNPA_PSEAO Ribonuclease P protein component (ISS) [Ostreococcus
tauri]
Length = 239
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNN--NSNLLPRVGFTV-TKKQGCAVERNRM 60
LK F VK+ G G ++ ++N ++ R+G V K+ AV+RN +
Sbjct: 97 ERLKTNADFDRVKRFGRTFNGSHLRIKAVDNASYDAATCTRLGIVVPKKRVRRAVDRNLI 156
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+RR++ R + D ++ A AL F+ L +
Sbjct: 157 KRRIRHVFRTNKDKW-PPRVDIIVFAGDTALEGGFEGLRDDM 197
>gi|303228592|ref|ZP_07315419.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
gi|303230630|ref|ZP_07317380.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302514685|gb|EFL56677.1| ribonuclease P protein component [Veillonella atypica
ACS-049-V-Sch6]
gi|302516771|gb|EFL58686.1| ribonuclease P protein component [Veillonella atypica
ACS-134-V-Col7a]
Length = 115
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + ++ LV K + + + R+GF KK GCAVERNR
Sbjct: 5 LDKTRRIINNNEYRLVYKHGKYEVGRLCVLYRM-PVAKQKTRIGFVTGKKVGCAVERNRA 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR +KE RL + + G+ V++ + ++ + +R++K
Sbjct: 64 RRLMKEVYRLNQHQI-REGYHIVIVGRGPLKDATYERAEKEILYLLRKSK 112
>gi|291615645|ref|YP_003518387.1| RnpA [Pantoea ananatis LMG 20103]
gi|291150675|gb|ADD75259.1| RnpA [Pantoea ananatis LMG 20103]
gi|327395911|dbj|BAK13333.1| ribonuclease P protein component RnpA [Pantoea ananatis AJ13355]
Length = 119
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNALGYPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PSMDFVVVAKKGVADLDNRMLAEALEKLWRRHCRLARGS 119
>gi|222035418|emb|CAP78163.1| ribonuclease P protein component [Escherichia coli LF82]
Length = 119
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRQARGS 119
>gi|19554288|ref|NP_602290.1| ribonuclease P [Corynebacterium glutamicum ATCC 13032]
gi|62391946|ref|YP_227348.1| ribonuclease P [Corynebacterium glutamicum ATCC 13032]
gi|24638169|sp|Q8NL51|RNPA_CORGL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21325871|dbj|BAC00492.1| RNase P protein component [Corynebacterium glutamicum ATCC 13032]
gi|41223093|emb|CAF19038.1| RNase P protein component [Corynebacterium glutamicum ATCC 13032]
Length = 133
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTV 47
+ L QF V +KG + + ++ S PR G V
Sbjct: 2 LPAQHKLNSSMQFRTVMRKGRRAGSKTVVVHLWDSAESLDGTEKQGEVASFGGPRFGLVV 61
Query: 48 TKKQGCAVERNRMRRRLKEA---VRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+K G AV R+R RRL+ + + +L H V+ A A EL
Sbjct: 62 SKAVGNAVVRHRTSRRLRHICASIAEKSPELLSPTHHVVIRALAGAGNATSAELERDIRY 121
Query: 105 RVRRNKRSY 113
+ + R
Sbjct: 122 GLGKASRVR 130
>gi|309811374|ref|ZP_07705161.1| ribonuclease P protein component [Dermacoccus sp. Ellin185]
gi|308434681|gb|EFP58526.1| ribonuclease P protein component [Dermacoccus sp. Ellin185]
Length = 149
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)
Query: 1 MSNICILKKRRQFALV---KKGELRKGPFFSLEVLN------NNNSNLLPRVGFTVTKKQ 51
+ ++ Q+ V ++ G ++ V++ + + PRVGF V+K
Sbjct: 2 LPAQHRIRDAGQYRAVLRDRRAGRAGGSLLAVHVIDADAFGLSPEDRVGPRVGFVVSKAV 61
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
G AV R+R +R L+ R + G D V+ A ++ F + + R
Sbjct: 62 GNAVVRSRAKRVLRHVARDALSEID-PGLDIVVRANPAIAGASSHDVAREFDRMLAKATR 120
Query: 112 SYYSGK 117
Sbjct: 121 RQRPQD 126
>gi|284047384|ref|YP_003397724.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
gi|283951605|gb|ADB54349.1| ribonuclease P protein component [Conexibacter woesei DSM 14684]
Length = 132
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
S L + +F V + G L PR+G +V++K G AVERN +
Sbjct: 12 SKRGRLSRSAEFDRVFRQGRSLANRVLVLYAFPRAE-EGEPRLGVSVSRKVGGAVERNHV 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL----FIPFKELCNHFVERVRRNKRSYYSG 116
+R L+EA + G+ GHD V++A+ +A + E + R +
Sbjct: 71 KRLLREAFEQESRGL-PDGHDVVVVARPEARAVAEREGLAGIQAALAELIARARERADGE 129
Query: 117 KNF 119
+
Sbjct: 130 RRR 132
>gi|78050042|ref|YP_366217.1| ribonuclease P [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|294627439|ref|ZP_06706023.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|123583681|sp|Q3BLZ6|RNPA_XANC5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|78038472|emb|CAJ26217.1| ribonuclease P, protein component [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598260|gb|EFF42413.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 145
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|53802854|ref|YP_115422.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
gi|67461353|sp|Q602M8|RNPA_METCA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53756615|gb|AAU90906.1| ribonuclease P protein component [Methylococcus capsulatus str.
Bath]
Length = 128
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERNRM 60
L +F V + R L VL NS PR+G ++ K+ AV+RNR+
Sbjct: 13 PRSHRLASPVEFRFVFEDACRSSDS-WLTVLARPNSLAHPRLGLALSRKQIRKAVDRNRI 71
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++E+ RL + DYV++A+ A + L + R +
Sbjct: 72 KRLVRESFRLRQAQLGT--IDYVVMARTPATSVNSAVLLRALEKHWLILTRRCSGSSS 127
>gi|301154701|emb|CBW14164.1| protein C5 component of RNase P [Haemophilus parainfluenzae T3T1]
Length = 122
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A +RNR+
Sbjct: 7 SRELRLLTPTQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHDRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++E+ RL + D+V +AKR + + + R+ R +
Sbjct: 66 KRLVRESFRLSQHNL--PSCDFVFVAKRGIGQLDNQTFLQTLDKLWARHIRLAQKSSS 121
>gi|289667651|ref|ZP_06488726.1| ribonuclease P [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 145
Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDNARRTSDP--LLSLHWRIGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRV 115
>gi|224367784|ref|YP_002601947.1| RnpA [Desulfobacterium autotrophicum HRM2]
gi|259494104|sp|C0QIZ3|RNPA_DESAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|223690500|gb|ACN13783.1| RnpA [Desulfobacterium autotrophicum HRM2]
Length = 117
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L KR F + + G ++ +F + R+G TV+K+ G AVERNR+
Sbjct: 7 PKTERLLKRADFLKLSRSGRTKQTRYFI--AAMLGSETDTTRLGITVSKRVGNAVERNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R +++ RL + + D +IA++ + +E+ + + ++ RS
Sbjct: 65 KRIVRDYYRLNRDTIS-GNRDINIIARKYVASLNNREVRDELGKLFKKIVRS 115
>gi|253991872|ref|YP_003043228.1| ribonuclease P [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253783322|emb|CAQ86487.1| ribonuclease P protein component [Photorhabdus asymbiotica]
Length = 119
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L + F V + R + +L N PR+G T+ K A ERNR+
Sbjct: 7 PRELRLLTPKHFTYVFQQPQRASSP-EITILGRLNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E+ RL + D+V++ ++ + +EL + RR+ R +
Sbjct: 66 KRLARESFRLNQHSL--PPMDFVVLVRKGVAELDNRELTEALGKLWRRHCRLVRAS 119
>gi|316932101|ref|YP_004107083.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
gi|315599815|gb|ADU42350.1| ribonuclease P protein component [Rhodopseudomonas palustris DX-1]
Length = 113
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ L + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MERLRQRADFIAVAGGLRINGPAFVLQSLRRED-QGPIRVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+E V+ G L DYVL+ +R AL F + + R R
Sbjct: 60 LRELVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERAARRSPKP 112
>gi|283787596|ref|YP_003367461.1| protein C5 component of RNase P [Citrobacter rodentium ICC168]
gi|282951050|emb|CBG90728.1| protein C5 component of RNase P [Citrobacter rodentium ICC168]
Length = 119
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|260771042|ref|ZP_05879970.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|260613931|gb|EEX39122.1| ribonuclease P protein component [Vibrio furnissii CIP 102972]
gi|315178631|gb|ADT85545.1| ribonuclease P [Vibrio furnissii NCTC 11218]
Length = 107
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P F++ +N+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQNVFQQAHRAGSPHFTIIA--RDNNLSHPRLGLAVPKKQIKTAVGRNRFKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + DYV+IAK+ A + +E+ F + R R
Sbjct: 59 RESFRLNQHKLAHK--DYVVIAKKSAQDLSNEEMFTLFDKLWHRLSRPSR 106
>gi|13878718|sp|P57915|RNPA_PASMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 119
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V + P ++ L N+ PR+G TV K A +RNR
Sbjct: 7 SRELRLLTPLHFKYVFEQPFRASTPELTI--LARPNNLAHPRLGLTVAKKHLKKAHDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + +R+ R
Sbjct: 65 IKRLCRESFRLAQYKL--PNCDFVIVAKQGIGKLDNRTLTQTLDKLWQRHIRLAQKS 119
>gi|328545249|ref|YP_004305358.1| ribonuclease P protein component [polymorphum gilvum SL003B-26A1]
gi|326414991|gb|ADZ72054.1| Ribonuclease P protein component [Polymorphum gilvum SL003B-26A1]
Length = 136
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LKKR +F V KG F L+ L + R G+TVTK+ G AVERNR+RRR
Sbjct: 1 MKTLKKRTEFLAVAKGGRADRRAFVLQGLRRGDDRG-TRFGYTVTKRTGNAVERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+ AV + G + G DYVLI +R AL +PF +L + + +
Sbjct: 60 LRAAVAALSPGDVPEGADYVLIGRRSALDMPFADLVRDLRSGLAKALDPNSARNA 114
>gi|219670953|ref|YP_002461388.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
gi|219541213|gb|ACL22952.1| ribonuclease P protein component [Desulfitobacterium hafniense
DCB-2]
Length = 111
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+++ + V +G+ G + + V + R GF +KK G AV RNR
Sbjct: 2 LQRSLRLRQKSLYRKVFAQGKSFSGKYVVIYV-----AEGPSRFGFIASKKVGNAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E +RL + K + IA+ + + ++ N ++ + + K
Sbjct: 57 AKRLMREVIRLHLAEM-KENTQIICIARSSIKGVSYSQVENSLLKSLYKAK 106
>gi|86153103|ref|ZP_01071308.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121613177|ref|YP_001000642.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005569|ref|ZP_02271327.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
gi|166226709|sp|A1VZV1|RNPA_CAMJJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85843988|gb|EAQ61198.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87248886|gb|EAQ71849.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 108
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN+ ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEK----KIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + Y+ IAK + + F L + +++ +
Sbjct: 57 SKRILRALFAKFERYLQDGK--YIFIAKNEITELSFSRLEKNLKWGLKKLE 105
>gi|283768632|ref|ZP_06341544.1| ribonuclease P protein component [Bulleidia extructa W1219]
gi|283105024|gb|EFC06396.1| ribonuclease P protein component [Bulleidia extructa W1219]
Length = 109
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK+ +F L+ +G+ + P F R+G ++ KK G AV+RN
Sbjct: 1 MKKRNRIKKKEEFQELIHQGKKKVNPSFVFYYQKKMEEQA--RMGISIPKKIGHAVQRNL 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R+++ + + +D VLI + F+E + +
Sbjct: 59 YKRQIRMMLEGMIP-FENYPYDVVLIVRFAYPTKNFEENQKLLERTLIK 106
>gi|160944269|ref|ZP_02091498.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
gi|158444451|gb|EDP21455.1| hypothetical protein FAEPRAM212_01778 [Faecalibacterium prausnitzii
M21/2]
Length = 166
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL RVG T TKK G AV+RNR RR +K
Sbjct: 37 IRRNSEFGRVYARGKSYVNPALVLYVLKTR--GRNTRVGLTATKKIGHAVQRNRARRVMK 94
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR------RNKRSYYSGKN 118
A+ + + G+D + +A+ + +L + + + KR
Sbjct: 95 AAIDEHLDYNI-GGYDLIFVARGMTPKLKSWQLSSVVAKLFAQAGLPDKAKRPDAKPPA 152
>gi|91202021|emb|CAJ75081.1| strongly similar to RNAse P protein [Candidatus Kuenenia
stuttgartiensis]
Length = 126
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L ++++F V G + K F L V + R+G V+KK G AV RNR+
Sbjct: 9 TKAERLLRKKEFDKVFDEGTVFKNKFLVLYVA--PGAQKCSRMGLVVSKKIGNAVRRNRV 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL-FIPFKELCNHFVERVRRNKR 111
+R L+E RL + D V+I + + ++ F + + + +
Sbjct: 67 KRLLREVFRLNKNRLTVP-VDIVIIPRNTFTSSLKLFDISAGFQQAIHQINK 117
>gi|320109425|ref|YP_004185015.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
gi|319927946|gb|ADV85021.1| ribonuclease P protein component [Terriglobus saanensis SP1PR4]
Length = 154
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL-------PRVGFTVTKKQGCAVER 57
L+ + + G + G + S S PRVG TV + G AV R
Sbjct: 35 RLRSHGDYQRMYAVGRKQFGKYISYFYAVRQPSENPRHRVHVGPRVGLTVGRVMGDAVTR 94
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
NR++RRL+ AV+ + D L KR + + + L R ++ +
Sbjct: 95 NRIKRRLRSAVQQHLVLLGGLNLDVALHPKRGFVDLEWSALERDVAVIFRAIAKAAGKPQ 154
>gi|163851775|ref|YP_001639818.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
gi|163663380|gb|ABY30747.1| ribonuclease P protein component [Methylobacterium extorquens PA1]
Length = 165
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTDRMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSLTRPA 120
Query: 114 YSGKNFSRK 122
+ S +
Sbjct: 121 TPRSSDSAR 129
>gi|91777108|ref|YP_546864.1| ribonuclease P [Methylobacillus flagellatus KT]
gi|91711095|gb|ABE51023.1| ribonuclease P protein component [Methylobacillus flagellatus KT]
Length = 127
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 6/122 (4%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V + G + L +N R+G V +K AV+RN
Sbjct: 9 RRQAKLLKTDEFSSVFNFRKRVSGQYLVLHY--RHNELAYARLGLVVGRKTARRAVDRNY 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++E R+ + G D V R F E+ F E V + +R S +
Sbjct: 67 IKRVMRELFRVNQHQL--PGLDLVARPHRMFGRQQFAEIEQEFTELVAKLQRKLASRQEQ 124
Query: 120 SR 121
Sbjct: 125 PE 126
>gi|304398070|ref|ZP_07379945.1| ribonuclease P protein component [Pantoea sp. aB]
gi|308188767|ref|YP_003932898.1| RNase P, protein component [Pantoea vagans C9-1]
gi|304354356|gb|EFM18728.1| ribonuclease P protein component [Pantoea sp. aB]
gi|308059277|gb|ADO11449.1| RNase P, protein component [Pantoea vagans C9-1]
Length = 119
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L N+ PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PSMDFVVVAKKGVADLDNRMLAEALEKLWRRHCRLARGS 119
>gi|39933710|ref|NP_945986.1| ribonuclease P protein component [Rhodopseudomonas palustris
CGA009]
gi|192289067|ref|YP_001989672.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
gi|39647557|emb|CAE26077.1| probable ribonuclease p protein component (protein c5)
[Rhodopseudomonas palustris CGA009]
gi|192282816|gb|ACE99196.1| ribonuclease P protein component [Rhodopseudomonas palustris TIE-1]
Length = 113
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ L++R F V G GP F L+ L + RVGFTVTKK G A ERNR+RRR
Sbjct: 1 MERLRQRADFIAVAGGLRINGPAFVLQSLRRED-QGPIRVGFTVTKKIGTATERNRIRRR 59
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L+E V+ G L DYVL+ +R AL F + + R R
Sbjct: 60 LRELVKRTDRGFLLPHSDYVLVGRRAALSRDFAVMLGDLRTALERVARRSPKP 112
>gi|54307241|ref|YP_128261.1| ribonuclease P [Photobacterium profundum SS9]
gi|60390459|sp|Q6LW54|RNPA_PHOPR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46911661|emb|CAG18459.1| Putative RNase P protein component [Photobacterium profundum SS9]
Length = 118
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
S L + V + P ++ L N PR+G V KKQ A RN
Sbjct: 7 SRELRLLTPEHYKKVFQQAHRAGSPHLTI--LARPNDLNHPRLGLAVPKKQIKTAPGRNH 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R ++E+ RL + +D+V+IAK+ A + +EL + R R
Sbjct: 65 FKRIVRESFRLKQHDL--PANDFVVIAKKSASELSNEELFKLLDKLWHRLSRLSR 117
>gi|322835124|ref|YP_004215151.1| ribonuclease P [Rahnella sp. Y9602]
gi|321170325|gb|ADW76024.1| ribonuclease P protein component [Rahnella sp. Y9602]
Length = 108
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ R F V + + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPRHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 59 RESFRLNQHTL--PSMDFVVVAKKGVADLDNRALTEALEKLWRRHCRQAPAS 108
>gi|221135463|ref|ZP_03561766.1| ribonuclease P protein component [Glaciecola sp. HTCC2999]
Length = 119
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
L F+ V ++ N+N PR+G T+ K + A +RNR++R
Sbjct: 11 RLLTPAHFSYVFADAVPAPSKHITILARKNSN-YTHPRLGITIAKNRVRKAHDRNRLKRV 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++E+ R + D ++I K + + +E ++ K+
Sbjct: 70 IRESFRHHQHFL--PNVDIIVIGKSNLDTLSNQEFNALLNTLWKKLKKRCEK 119
>gi|197286948|ref|YP_002152820.1| ribonuclease P [Proteus mirabilis HI4320]
gi|227354812|ref|ZP_03839229.1| ribonuclease P protein component [Proteus mirabilis ATCC 29906]
gi|133182|sp|P22835|RNPA_PROMI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690076|sp|B4F0U3|RNPA_PROMH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150876|gb|AAA83956.1| RNaseP C5 subunit [Proteus mirabilis]
gi|194684435|emb|CAR46148.1| ribonuclease P protein component [Proteus mirabilis HI4320]
gi|227165130|gb|EEI49961.1| ribonuclease P protein component [Proteus mirabilis ATCC 29906]
Length = 119
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L + F V + R + +L N PR+G T+ K A ERNR+
Sbjct: 7 PRELRLLTPKHFNFVFQQPQRASSP-EVTILGRQNELGHPRIGLTIAKKNVKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R +E RL + D+V++ ++ + +L + RR+ R
Sbjct: 66 KRLAREYFRLHQHQL--PAMDFVVLVRKGVAELDNHQLTEVLGKLWRRHCRLAQKS 119
>gi|16131572|ref|NP_418159.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
MG1655]
gi|24114986|ref|NP_709496.1| ribonuclease P [Shigella flexneri 2a str. 301]
gi|30065012|ref|NP_839183.1| ribonuclease P [Shigella flexneri 2a str. 2457T]
gi|74314018|ref|YP_312437.1| ribonuclease P [Shigella sonnei Ss046]
gi|82546032|ref|YP_409979.1| ribonuclease P [Shigella boydii Sb227]
gi|82779233|ref|YP_405582.1| ribonuclease P [Shigella dysenteriae Sd197]
gi|89110309|ref|AP_004089.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
W3110]
gi|91213227|ref|YP_543213.1| ribonuclease P [Escherichia coli UTI89]
gi|117625979|ref|YP_859302.1| ribonuclease P [Escherichia coli APEC O1]
gi|157156562|ref|YP_001465189.1| ribonuclease P [Escherichia coli E24377A]
gi|157163184|ref|YP_001460502.1| ribonuclease P [Escherichia coli HS]
gi|170083205|ref|YP_001732525.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
DH10B]
gi|170679855|ref|YP_001746034.1| ribonuclease P [Escherichia coli SMS-3-5]
gi|170766655|ref|ZP_02901108.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|187731058|ref|YP_001882462.1| ribonuclease P [Shigella boydii CDC 3083-94]
gi|188492336|ref|ZP_02999606.1| ribonuclease P protein component [Escherichia coli 53638]
gi|191165811|ref|ZP_03027649.1| ribonuclease P protein component [Escherichia coli B7A]
gi|191170299|ref|ZP_03031852.1| ribonuclease P protein component [Escherichia coli F11]
gi|193063844|ref|ZP_03044931.1| ribonuclease P protein component [Escherichia coli E22]
gi|193069131|ref|ZP_03050088.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194428119|ref|ZP_03060663.1| ribonuclease P protein component [Escherichia coli B171]
gi|194435905|ref|ZP_03068008.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209921181|ref|YP_002295265.1| ribonuclease P [Escherichia coli SE11]
gi|215489044|ref|YP_002331475.1| ribonuclease P [Escherichia coli O127:H6 str. E2348/69]
gi|218551234|ref|YP_002385026.1| ribonuclease P [Escherichia fergusonii ATCC 35469]
gi|218556270|ref|YP_002389184.1| ribonuclease P [Escherichia coli IAI1]
gi|218560779|ref|YP_002393692.1| ribonuclease P [Escherichia coli S88]
gi|218691992|ref|YP_002400204.1| ribonuclease P [Escherichia coli ED1a]
gi|218697426|ref|YP_002405093.1| ribonuclease P [Escherichia coli 55989]
gi|218702553|ref|YP_002410182.1| ribonuclease P [Escherichia coli IAI39]
gi|218707350|ref|YP_002414869.1| ribonuclease P [Escherichia coli UMN026]
gi|237703506|ref|ZP_04533987.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238902794|ref|YP_002928590.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|254038923|ref|ZP_04872975.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|254163655|ref|YP_003046763.1| ribonuclease P [Escherichia coli B str. REL606]
gi|260846511|ref|YP_003224289.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|260857885|ref|YP_003231776.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|260870435|ref|YP_003236837.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|291285123|ref|YP_003501941.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|293407344|ref|ZP_06651266.1| rnpA [Escherichia coli FVEC1412]
gi|293413159|ref|ZP_06655825.1| ribonuclease P [Escherichia coli B354]
gi|293417176|ref|ZP_06659803.1| ribonuclease P [Escherichia coli B185]
gi|293464027|ref|ZP_06664441.1| ribonuclease P [Escherichia coli B088]
gi|298383085|ref|ZP_06992680.1| rnpA [Escherichia coli FVEC1302]
gi|309784246|ref|ZP_07678885.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|331644428|ref|ZP_08345557.1| ribonuclease P protein component [Escherichia coli H736]
gi|331649531|ref|ZP_08350617.1| ribonuclease P protein component [Escherichia coli M605]
gi|331655365|ref|ZP_08356364.1| ribonuclease P protein component [Escherichia coli M718]
gi|331660047|ref|ZP_08360985.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331665354|ref|ZP_08366255.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331670548|ref|ZP_08371387.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331675195|ref|ZP_08375948.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331679802|ref|ZP_08380472.1| ribonuclease P protein component [Escherichia coli H591]
gi|331685428|ref|ZP_08386014.1| ribonuclease P protein component [Escherichia coli H299]
gi|332282507|ref|ZP_08394920.1| ribonuclease P protein component [Shigella sp. D9]
gi|67472378|sp|P0A7Y8|RNPA_ECOLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67472379|sp|P0A7Y9|RNPA_SHIFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|122421837|sp|Q1R4N2|RNPA_ECOUT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123558281|sp|Q31UV7|RNPA_SHIBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123561064|sp|Q329B4|RNPA_SHIDS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123615902|sp|Q3YWB0|RNPA_SHISS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226717|sp|A1AHN8|RNPA_ECOK1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991076|sp|A7ZTR0|RNPA_ECO24 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166991077|sp|A8A6G5|RNPA_ECOHS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736863|sp|B7MGC5|RNPA_ECO45 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736864|sp|B7NR06|RNPA_ECO7I RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736865|sp|B7M556|RNPA_ECO8A RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736866|sp|B7NF21|RNPA_ECOLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736867|sp|B1LL31|RNPA_ECOSM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226736868|sp|B7LK46|RNPA_ESCF3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741388|sp|B6I3T7|RNPA_ECOSE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890166|sp|B1X9T2|RNPA_ECODH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238691695|sp|B2TUS4|RNPA_SHIB3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808065|sp|B7UMH1|RNPA_ECO27 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808066|sp|B7L844|RNPA_ECO55 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808067|sp|B7N2E9|RNPA_ECO81 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494105|sp|C4ZYY1|RNPA_ECOBW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147683|gb|AAA24567.1| ribonuclease P protein component [Escherichia coli]
gi|290552|gb|AAA62055.1| RNase P, protein component [Escherichia coli]
gi|1790139|gb|AAC76727.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
MG1655]
gi|24054238|gb|AAN45203.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
301]
gi|30043273|gb|AAP18994.1| RNase P, protein component; protein C5 [Shigella flexneri 2a str.
2457T]
gi|73857495|gb|AAZ90202.1| RNase P, protein component [Shigella sonnei Ss046]
gi|81243381|gb|ABB64091.1| RNase P, protein component [Shigella dysenteriae Sd197]
gi|81247443|gb|ABB68151.1| RnpA [Shigella boydii Sb227]
gi|85676340|dbj|BAE77590.1| protein C5 component of RNase P [Escherichia coli str. K12 substr.
W3110]
gi|91074801|gb|ABE09682.1| ribonuclease P protein component [Escherichia coli UTI89]
gi|115515103|gb|ABJ03178.1| inner membrane protein translocase component YidC [Escherichia coli
APEC O1]
gi|157068864|gb|ABV08119.1| ribonuclease P protein component [Escherichia coli HS]
gi|157078592|gb|ABV18300.1| ribonuclease P protein component [Escherichia coli E24377A]
gi|169891040|gb|ACB04747.1| protein C5 component of RNase P [Escherichia coli str. K-12 substr.
DH10B]
gi|170124093|gb|EDS93024.1| ribonuclease P protein component [Escherichia albertii TW07627]
gi|170517573|gb|ACB15751.1| ribonuclease P protein component [Escherichia coli SMS-3-5]
gi|187428050|gb|ACD07324.1| ribonuclease P protein component [Shigella boydii CDC 3083-94]
gi|188487535|gb|EDU62638.1| ribonuclease P protein component [Escherichia coli 53638]
gi|190904135|gb|EDV63846.1| ribonuclease P protein component [Escherichia coli B7A]
gi|190909107|gb|EDV68693.1| ribonuclease P protein component [Escherichia coli F11]
gi|192930559|gb|EDV83166.1| ribonuclease P protein component [Escherichia coli E22]
gi|192957455|gb|EDV87901.1| ribonuclease P protein component [Escherichia coli E110019]
gi|194413877|gb|EDX30155.1| ribonuclease P protein component [Escherichia coli B171]
gi|194425448|gb|EDX41432.1| ribonuclease P protein component [Escherichia coli 101-1]
gi|209754088|gb|ACI75351.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754094|gb|ACI75354.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209914440|dbj|BAG79514.1| ribonuclease P protein component [Escherichia coli SE11]
gi|215267116|emb|CAS11563.1| protein C5 component of RNase P [Escherichia coli O127:H6 str.
E2348/69]
gi|218354158|emb|CAV00761.1| protein C5 component of RNase P [Escherichia coli 55989]
gi|218358776|emb|CAQ91434.1| protein C5 component of RNase P [Escherichia fergusonii ATCC 35469]
gi|218363039|emb|CAR00678.1| protein C5 component of RNase P [Escherichia coli IAI1]
gi|218367548|emb|CAR05333.1| protein C5 component of RNase P [Escherichia coli S88]
gi|218372539|emb|CAR20414.1| protein C5 component of RNase P [Escherichia coli IAI39]
gi|218429556|emb|CAR10520.2| protein C5 component of RNase P [Escherichia coli ED1a]
gi|218434447|emb|CAR15375.1| protein C5 component of RNase P [Escherichia coli UMN026]
gi|226838888|gb|EEH70915.1| ribonuclease P protein component [Escherichia sp. 1_1_43]
gi|226902770|gb|EEH89029.1| ribonuclease P protein component [Escherichia sp. 3_2_53FAA]
gi|238863295|gb|ACR65293.1| protein C5 component of RNase P [Escherichia coli BW2952]
gi|242379243|emb|CAQ34048.1| RNAse P protein component; processes tRNA, 4.5S RNA, subunit of
RNase P [Escherichia coli BL21(DE3)]
gi|253975556|gb|ACT41227.1| ribonuclease P [Escherichia coli B str. REL606]
gi|253979712|gb|ACT45382.1| ribonuclease P [Escherichia coli BL21(DE3)]
gi|257756534|dbj|BAI28036.1| protein C5 component of RNase P [Escherichia coli O26:H11 str.
11368]
gi|257761658|dbj|BAI33155.1| protein C5 component of RNase P [Escherichia coli O103:H2 str.
12009]
gi|257766791|dbj|BAI38286.1| protein C5 component of RNase P [Escherichia coli O111:H- str.
11128]
gi|281180759|dbj|BAI57089.1| ribonuclease P protein component [Escherichia coli SE15]
gi|281603070|gb|ADA76054.1| RNase P, protein component (Protein C5), processes tRNA, 45S RNA
[Shigella flexneri 2002017]
gi|284923787|emb|CBG36885.1| ribonuclease P protein component [Escherichia coli 042]
gi|290764996|gb|ADD58957.1| Ribonuclease P protein component [Escherichia coli O55:H7 str.
CB9615]
gi|291321659|gb|EFE61095.1| ribonuclease P [Escherichia coli B088]
gi|291425635|gb|EFE98671.1| rnpA [Escherichia coli FVEC1412]
gi|291431207|gb|EFF04200.1| ribonuclease P [Escherichia coli B185]
gi|291468292|gb|EFF10787.1| ribonuclease P [Escherichia coli B354]
gi|294490598|gb|ADE89354.1| ribonuclease P protein component [Escherichia coli IHE3034]
gi|298276921|gb|EFI18439.1| rnpA [Escherichia coli FVEC1302]
gi|308927753|gb|EFP73221.1| ribonuclease P protein component [Shigella dysenteriae 1617]
gi|309704151|emb|CBJ03498.1| ribonuclease P protein component [Escherichia coli ETEC H10407]
gi|315138288|dbj|BAJ45447.1| protein C5 component of RNase P [Escherichia coli DH1]
gi|323380929|gb|ADX53197.1| ribonuclease P protein component [Escherichia coli KO11]
gi|323934945|gb|EGB31323.1| ribonuclease P [Escherichia coli E1520]
gi|323939233|gb|EGB35446.1| ribonuclease P [Escherichia coli E482]
gi|323944176|gb|EGB40256.1| ribonuclease P [Escherichia coli H120]
gi|323949948|gb|EGB45832.1| ribonuclease P [Escherichia coli H252]
gi|323955001|gb|EGB50779.1| ribonuclease P [Escherichia coli H263]
gi|323959769|gb|EGB55419.1| ribonuclease P [Escherichia coli H489]
gi|323965765|gb|EGB61216.1| ribonuclease P [Escherichia coli M863]
gi|323971181|gb|EGB66427.1| ribonuclease P [Escherichia coli TA007]
gi|323975229|gb|EGB70333.1| ribonuclease P [Escherichia coli TW10509]
gi|324111601|gb|EGC05582.1| ribonuclease P [Escherichia fergusonii B253]
gi|324115944|gb|EGC09870.1| ribonuclease P [Escherichia coli E1167]
gi|331036722|gb|EGI08948.1| ribonuclease P protein component [Escherichia coli H736]
gi|331042029|gb|EGI14173.1| ribonuclease P protein component [Escherichia coli M605]
gi|331047380|gb|EGI19458.1| ribonuclease P protein component [Escherichia coli M718]
gi|331053262|gb|EGI25295.1| ribonuclease P protein component [Escherichia coli TA206]
gi|331057864|gb|EGI29850.1| ribonuclease P protein component [Escherichia coli TA143]
gi|331062610|gb|EGI34530.1| ribonuclease P protein component [Escherichia coli TA271]
gi|331067640|gb|EGI39042.1| ribonuclease P protein component [Escherichia coli TA280]
gi|331072974|gb|EGI44299.1| ribonuclease P protein component [Escherichia coli H591]
gi|331077799|gb|EGI49011.1| ribonuclease P protein component [Escherichia coli H299]
gi|332104859|gb|EGJ08205.1| ribonuclease P protein component [Shigella sp. D9]
gi|332764075|gb|EGJ94312.1| ribonuclease P protein component [Shigella flexneri 2930-71]
gi|224748|prf||1112173A RNase P
Length = 119
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|119475235|ref|ZP_01615588.1| ribonuclease P [marine gamma proteobacterium HTCC2143]
gi|119451438|gb|EAW32671.1| ribonuclease P [marine gamma proteobacterium HTCC2143]
Length = 128
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L + + V K + L N + PR+G + K A +RNR+
Sbjct: 7 SKSQRLLEASAYKSVFDDARLKASRQQVLFLARPNDLINPRLGLVIAKKNVRKANQRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + D V++A+R + +L F + + ++ N
Sbjct: 67 KRIIRESFRLKQHRL--SNIDTVVLARRGLDQLSNADLHTLFGQLWHQLQQKADKLANQP 124
Query: 121 R 121
+
Sbjct: 125 K 125
>gi|260553774|ref|ZP_05826044.1| ribonuclease P protein component [Acinetobacter sp. RUH2624]
gi|260405078|gb|EEW98578.1| ribonuclease P protein component [Acinetobacter sp. RUH2624]
Length = 131
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 12 RVRCAADYKSVFDGALFKVHQPHFLFLAKFTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 72 RESFRLNQPKFGL-DIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|213966269|ref|ZP_03394453.1| ribonuclease P protein component [Corynebacterium amycolatum SK46]
gi|213951121|gb|EEB62519.1| ribonuclease P protein component [Corynebacterium amycolatum SK46]
Length = 126
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNL------------LPRVGFTV 47
+ L+ R F V++G L + + S PRVG V
Sbjct: 2 LPQSNKLRSSRDFTVTVRRGRRIGRKTLVLHIRDTAASGGEDKTDTQIARFGGPRVGLVV 61
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+K G AV R+ + R+L+ + A+ + D V+ A + +EL + +
Sbjct: 62 SKAVGNAVTRHAVSRKLRHVMAAAAQDL-PSTMDIVVRALPASATATSQELSHDVQSALA 120
Query: 108 RNKRSY 113
+R
Sbjct: 121 TYERRR 126
>gi|145297092|ref|YP_001139913.1| ribonuclease P [Corynebacterium glutamicum R]
gi|166226716|sp|A4QIE5|RNPA_CORGB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|140847012|dbj|BAF56011.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 133
Score = 68.2 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTV 47
+ L QF V +KG + + ++ S PR G V
Sbjct: 2 LPAQHKLNSSMQFRTVMRKGRRAGSKTVVVHLWDSAESLDGTEKQGEVASFGGPRFGLVV 61
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCA---EGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+K G AV R+R RRL+ +L H V+ A A P EL
Sbjct: 62 SKAVGNAVVRHRTSRRLRHICASIVEKSPELLSPTHHVVIRALAGAGNAPSAELERDIRY 121
Query: 105 RVRRNKRSY 113
+ + R
Sbjct: 122 GLGKTSRVR 130
>gi|313681704|ref|YP_004059442.1| ribonuclease p protein component [Sulfuricurvum kujiense DSM 16994]
gi|313154564|gb|ADR33242.1| ribonuclease P protein component [Sulfuricurvum kujiense DSM 16994]
Length = 114
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK +F V +G+ +L L +VG+T +KK G AV RNR +RRL+
Sbjct: 2 LKLHSEFQRVYQRGKNAHSTSIALFYLPLAGEK---KVGYTASKKVGNAVVRNRCKRRLR 58
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ V YV +AK+ PF + ++R
Sbjct: 59 ALFDEFSPSV--QDGWYVFVAKKGLFDNPFDTVRRDCKYVLKR 99
>gi|312882240|ref|ZP_07741986.1| ribonuclease P [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370084|gb|EFP97590.1| ribonuclease P [Vibrio caribbenthicus ATCC BAA-2122]
Length = 118
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L + V + P F++ NNS PR+G V KKQ + RNR +R
Sbjct: 11 RLLTPEHYQNVFQQAHRAGSPHFTIIA--RNNSLSHPRLGLAVPKKQIKTSPARNRFKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + R R
Sbjct: 69 ARESFRNKQHQL--PNKDFVVIAKKSAQDLTNEEIFKLFDKLWHRLSRPSR 117
>gi|319405207|emb|CBI78812.1| ribonuclease P protein component (fragment) [Bartonella sp. AR
15-3]
Length = 109
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
V GE R+GP F LE+ + RVGFTVT+K G AV+RNR++RRL+EAVR
Sbjct: 2 AVHTGEKRRGPLFLLEIKRREQTAKTKYPLTARVGFTVTRKNGNAVQRNRIKRRLREAVR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ ++ G DYV+IA R+ L PF L + R++ +
Sbjct: 62 VGLTNEMEAGTDYVIIAHRNILHAPFTLLISELSRRIKSKTKK 104
>gi|157144346|ref|YP_001451665.1| ribonuclease P [Citrobacter koseri ATCC BAA-895]
gi|166226710|sp|A8ACL6|RNPA_CITK8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157081551|gb|ABV11229.1| hypothetical protein CKO_00050 [Citrobacter koseri ATCC BAA-895]
Length = 119
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|307297276|ref|ZP_07577082.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916536|gb|EFN46918.1| ribonuclease P protein component [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 142
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S L+++ F V K G+ PFF + + N R+G ++ +K G A RNR
Sbjct: 8 LSKNERLRRKADFDRVFKKGKSIVDPFFVVLYVKN--GLPFSRIGISIRRKFGKAHLRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI------PFKELCNHFVERVRRN 109
+RR +KE R + V G+D + IA++D + + ++ +
Sbjct: 66 LRRLVKEVYRTN-KQVFPEGYDILFIARKDLSDLFKKRKVGYFDIVQIIKRIAEKI 120
>gi|239980789|ref|ZP_04703313.1| RNase P component [Streptomyces albus J1074]
gi|291452648|ref|ZP_06592038.1| ribonuclease P protein component [Streptomyces albus J1074]
gi|291355597|gb|EFE82499.1| ribonuclease P protein component [Streptomyces albus J1074]
Length = 123
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVL-------NNNNSNLLPRVGFTVTKKQG 52
+ + L++R F V++G P + + + + R GF V+K G
Sbjct: 2 LPSENRLRRREDFATAVRRGRRAGRPALVVHLRSGVTDPHASGEESPPTRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV R ++R+L+ +R + G V+ A A +L + R
Sbjct: 62 GAVVRTAVKRKLRHLMRERLSRL-PEGSLVVVRALPPAGDADHAQLARDLDAALERL 117
>gi|16762485|ref|NP_458102.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16767125|ref|NP_462740.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143973|ref|NP_807315.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56415713|ref|YP_152788.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168242060|ref|ZP_02666992.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260375|ref|ZP_02682348.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168464829|ref|ZP_02698721.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194442892|ref|YP_002043090.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194448360|ref|YP_002047873.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194471801|ref|ZP_03077785.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736278|ref|YP_002116784.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197249097|ref|YP_002148778.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197265669|ref|ZP_03165743.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198243786|ref|YP_002217790.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200388996|ref|ZP_03215608.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928601|ref|ZP_03219800.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354573|ref|YP_002228374.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859066|ref|YP_002245717.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213052695|ref|ZP_03345573.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213648783|ref|ZP_03378836.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|54039264|sp|P66687|RNPA_SALTI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|54042178|sp|P66686|RNPA_SALTY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461318|sp|Q5PKU4|RNPA_SALPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741392|sp|B5EYX4|RNPA_SALA4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741393|sp|B5FN12|RNPA_SALDC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741394|sp|B5QUQ2|RNPA_SALEP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741395|sp|B5RFY5|RNPA_SALG2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690238|sp|B4TAV1|RNPA_SALHS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690701|sp|B4TN09|RNPA_SALSV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238693554|sp|B4SYB0|RNPA_SALNS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|25289267|pir||AG0957 RNase P, protein component [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16422414|gb|AAL22699.1| RNase P [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16504790|emb|CAD03155.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139609|gb|AAO71175.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56129970|gb|AAV79476.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194401555|gb|ACF61777.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406664|gb|ACF66883.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194458165|gb|EDX47004.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711780|gb|ACF91001.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195632089|gb|EDX50573.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197212800|gb|ACH50197.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243924|gb|EDY26544.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197938302|gb|ACH75635.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199606094|gb|EDZ04639.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322034|gb|EDZ07232.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274354|emb|CAR39379.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205339035|gb|EDZ25799.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205350335|gb|EDZ36966.1| ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206710869|emb|CAR35233.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261248981|emb|CBG26838.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996127|gb|ACY91012.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160373|emb|CBW19898.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914969|dbj|BAJ38943.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320088261|emb|CBY98023.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322617248|gb|EFY14153.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619064|gb|EFY15950.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625131|gb|EFY21959.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630182|gb|EFY26953.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322635277|gb|EFY31992.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642899|gb|EFY39483.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647621|gb|EFY44108.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650573|gb|EFY46980.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656401|gb|EFY52693.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322661581|gb|EFY57804.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322668224|gb|EFY64382.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672847|gb|EFY68955.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322674972|gb|EFY71058.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322687738|gb|EFY83707.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323132201|gb|ADX19631.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323192047|gb|EFZ77282.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200529|gb|EFZ85607.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323206698|gb|EFZ91655.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211770|gb|EFZ96603.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323220033|gb|EGA04503.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224803|gb|EGA09068.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232488|gb|EGA16590.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235263|gb|EGA19348.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241051|gb|EGA25088.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323248630|gb|EGA32560.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252071|gb|EGA35931.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258625|gb|EGA42288.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262344|gb|EGA45902.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268180|gb|EGA51656.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270594|gb|EGA54039.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326629709|gb|EGE36052.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
gi|332990690|gb|AEF09673.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 119
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|209693638|ref|YP_002261566.1| ribonuclease P [Aliivibrio salmonicida LFI1238]
gi|226741384|sp|B6EP41|RNPA_ALISL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|208007589|emb|CAQ77689.1| ribonuclease P protein component (RNase P protein) [Aliivibrio
salmonicida LFI1238]
Length = 117
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNR 59
S L + V K P F++ L NS PR+G V KKQ RN+
Sbjct: 6 SRELRLLTPEDYKSVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNK 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R +E+ R + D+V+IAK+ A + ++ + R R
Sbjct: 64 FKRITRESFRNKQHSL--PAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 116
>gi|206576561|ref|YP_002241309.1| ribonuclease P protein component [Klebsiella pneumoniae 342]
gi|238897215|ref|YP_002921963.1| ribonuclease P [Klebsiella pneumoniae NTUH-K2044]
gi|290511688|ref|ZP_06551056.1| ribonuclease P [Klebsiella sp. 1_1_55]
gi|330005211|ref|ZP_08305170.1| ribonuclease P protein component [Klebsiella sp. MS 92-3]
gi|226741391|sp|B5XZP6|RNPA_KLEP3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206565619|gb|ACI07395.1| ribonuclease P protein component [Klebsiella pneumoniae 342]
gi|238549545|dbj|BAH65896.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|289775478|gb|EFD83478.1| ribonuclease P [Klebsiella sp. 1_1_55]
gi|328536343|gb|EGF62705.1| ribonuclease P protein component [Klebsiella sp. MS 92-3]
Length = 119
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AKR + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PPMDFVVVAKRGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|46397712|sp|Q7X5K6|RNPA_THET8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67461462|sp|Q72LI2|RNPA_THET2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908467|gb|AAO88977.1| RNase P protein subunit [Thermus thermophilus]
Length = 163
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G + S++ L RVG V+KK G AV RN+++
Sbjct: 61 KLLSLKGDRAFQRLRKGRAGRGRYVSVKWLPAAE----LRVGIVVSKKVGKAVVRNKVK- 115
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +++A +A F EL V +R++
Sbjct: 116 ---RRLREILRRLHLPQAHLLVVASPEAREADFAELFRDVVRALRKS 159
>gi|262377657|ref|ZP_06070877.1| ribonuclease P [Acinetobacter lwoffii SH145]
gi|262307416|gb|EEY88559.1| ribonuclease P [Acinetobacter lwoffii SH145]
Length = 130
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 1 MSNIC------ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGC 53
M+ + L+ + V G L K L ++ R+G V KK
Sbjct: 1 MTKLYSFGTELRLRCAADYKGVFDGALFKVHQPHFLFLAKHSELPNSRLGLVVAKKKVRR 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR++R +E+ RL + + D V++ K +P EL ++ R
Sbjct: 61 AHERNRVKRLARESFRLHQQQLD--DLDIVIMPKMGVEAVPNAELHQQLQFAWQKLNRLA 118
Query: 114 YS 115
Sbjct: 119 KK 120
>gi|330447271|ref|ZP_08310921.1| ribonuclease P protein component [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491462|dbj|GAA05418.1| ribonuclease P protein component [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 107
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ + V + P ++ L +N PR+G V K+ AV+RNR +R +
Sbjct: 1 MLTPEHYKTVFQQAHRAGSPHLTI--LARSNELNCPRLGLAVPKKQIKNAVDRNRFKRIV 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL + R R
Sbjct: 59 RESFRLKQHQL--PAKDFVVIAKKSANELSNEELFKLLDKLWHRLSRPSR 106
>gi|167855251|ref|ZP_02478020.1| ribonuclease P [Haemophilus parasuis 29755]
gi|167853615|gb|EDS24860.1| ribonuclease P [Haemophilus parasuis 29755]
Length = 136
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + P +L L+ N R+G TV K A +RNR
Sbjct: 17 PRELRLLAPVQFKAVFELPLRASTPQLTL--LSRQNDIEHARIGLTVAKKHLKKAHDRNR 74
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++E+ RL + +D+V +AK + +EL + +R+ R
Sbjct: 75 IKRIVRESFRLKQHQL--PAYDFVFVAKGGIGKLSNQELFETLDKLWQRHIRLAQK 128
>gi|146313781|ref|YP_001178855.1| ribonuclease P protein component [Enterobacter sp. 638]
gi|145320657|gb|ABP62804.1| ribonuclease P protein component [Enterobacter sp. 638]
Length = 108
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPYRAGTPQITI--LGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R +
Sbjct: 59 RESFRLRQHEL--PSMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLAHGS 108
>gi|91795122|ref|YP_564773.1| ribonuclease P protein component [Shewanella denitrificans OS217]
gi|123060480|sp|Q12HM6|RNPA_SHEDO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91717124|gb|ABE57050.1| ribonuclease P protein component [Shewanella denitrificans OS217]
Length = 118
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
S L QF V K + +L N PR+G TV K+ A +RNR+
Sbjct: 7 SRELRLLTPAQFKSVFSNP-IKASSAEITLLAIPNIEQHPRLGLTVAKRFVKRANQRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R ++E+ RL + D V++ + + + +L + R+ R
Sbjct: 66 KRVIRESFRLNQHDI--PALDIVVLVRNGVMEMENADLNKLIEKLWRKLSRR 115
>gi|194367816|ref|YP_002030426.1| ribonuclease P protein component [Stenotrophomonas maltophilia
R551-3]
gi|238693460|sp|B4SPG1|RNPA_STRM5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|194350620|gb|ACF53743.1| ribonuclease P protein component [Stenotrophomonas maltophilia
R551-3]
Length = 152
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
++ R +++ V G P +L L ++ R+G V++K AV RNR
Sbjct: 11 PRSARVRTRAEYSTVFNGARRVSDPLMTLHWLP---ADRPARLGLAVSRKVDPHAVGRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
++R L++A+R + D+V++A+ A ++ F
Sbjct: 68 IKRVLRDALRQTRTDMQPG--DFVVVARSAARNASNDDIRQAF 108
>gi|95929984|ref|ZP_01312724.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
gi|95133953|gb|EAT15612.1| ribonuclease P protein component [Desulfuromonas acetoxidans DSM
684]
Length = 103
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K + + + G + +F L + +N R GFTV+KK G AV RNR++R L+
Sbjct: 3 IKNKTDYTQCYQSGIKKHTRYFILFFIA---TNSPARFGFTVSKKIGGAVVRNRIKRLLR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDAL---FIPFKELCNHFVERV 106
E VR L +D V++AKR A + EL + + ++
Sbjct: 60 EFVRNNYSDDLL--YDVVIVAKRRAALFNKKKYAELADDLLPQL 101
>gi|301064568|ref|ZP_07204964.1| ribonuclease P protein component [delta proteobacterium NaphS2]
gi|300441316|gb|EFK05685.1| ribonuclease P protein component [delta proteobacterium NaphS2]
Length = 111
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L +R +F V + G+ R F ++ N + R+G T ++K G AV RNR +R
Sbjct: 11 ERLLRRTEFVNVNRSGKHRHMRHFI--AVSGKNELGITRLGVTASRKVGNAVRRNRAKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
++E RL + G D V+IAK+ A ++ + E +
Sbjct: 69 IREFYRLH-KACFPKGVDIVVIAKKGAGYLNYHEAEKELEKI 109
>gi|328950560|ref|YP_004367895.1| Ribonuclease P protein component [Marinithermus hydrothermalis DSM
14884]
gi|328450884|gb|AEB11785.1| Ribonuclease P protein component [Marinithermus hydrothermalis DSM
14884]
Length = 150
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L+ F V+KG + S+ L N S RVG V+KK G AV RN++R
Sbjct: 45 RLTSLRGDAAFRRVRKGRPGRSRLVSVRWLPLNASE--IRVGIVVSKKVGKAVVRNKVR- 101
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + + ++IA+ +A F+EL + + ++
Sbjct: 102 ---RRIREIVRRLHLPPAEIMIIARPEAAQASFQELARDLRKALAKS 145
>gi|325915703|ref|ZP_08178008.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
gi|325538120|gb|EGD09811.1| ribonuclease P protein component [Xanthomonas vesicatoria ATCC
35937]
Length = 159
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 25 PRSARVRTRAQYTVVFDTARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 83 KRVLRDAMRHLLPDLA--GGDYVIVARSAAAKATNPQIRDAFVRLLRR 128
>gi|308273507|emb|CBX30109.1| Ribonuclease P protein component [uncultured Desulfobacterium sp.]
Length = 113
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 3 NICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ KRR+F L KKG K + ++ + S R+G TVTKK G +V+RNR++
Sbjct: 10 KTERILKRREFYELSKKGNRIKNKYVTVIY--SPGSTEKCRLGLTVTKKIGNSVQRNRIK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R ++E R+ K+ D +I K +A + F+ + + ++
Sbjct: 68 RYIREFFRVNKSR-FKNNWDINVIPKSEAANLTFENTHLYLLNIFKK 113
>gi|323342259|ref|ZP_08082491.1| ribonuclease P protein component [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463371|gb|EFY08565.1| ribonuclease P protein component [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 108
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK +F + K F++ + N R G KK G AV RN+
Sbjct: 1 MREEFRVKKAAEFQKIMGARRFKNTKAFTVYIDKRTKDN--SRYGIAAPKKLGNAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ ++ + +DY+++ ++ ++E ++ K
Sbjct: 59 TKRQIRSMLQDI--NMFDTPYDYIVLVRKKYYEQSYEENQKDLENLIKTVK 107
>gi|218283268|ref|ZP_03489323.1| hypothetical protein EUBIFOR_01912 [Eubacterium biforme DSM 3989]
gi|218215958|gb|EEC89496.1| hypothetical protein EUBIFOR_01912 [Eubacterium biforme DSM 3989]
Length = 113
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + K +F+ + + K F + RVG +V KK G AV RN+
Sbjct: 1 MKKEFRVLKNYEFSSIIQNRQFVKSSSFVCYFQKRKLDHA--RVGISVGKKLGNAVCRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+L+ V + G+D ++I + F+E N E R +
Sbjct: 59 VKRQLRSIVDDVFT--FEEGYDVIIIVRPAYTNKSFEENKNEMKENQNRINKR 109
>gi|169634941|ref|YP_001708677.1| RNase P C5 component [Acinetobacter baumannii SDF]
gi|238688229|sp|B0VQP7|RNPA_ACIBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169153733|emb|CAP02934.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Acinetobacter baumannii]
Length = 131
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V L K L R+G V KK A ERNR++R
Sbjct: 12 RIRCAADYKSVFDDALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I EL ++ +R
Sbjct: 72 RESFRLHQPKFG-SDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 121
>gi|197364641|ref|YP_002144278.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238690764|sp|B5BIL6|RNPA_SALPK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|197096118|emb|CAR61714.1| RNase P, protein component [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 119
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 SRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|237729026|ref|ZP_04559507.1| ribonuclease P protein component [Citrobacter sp. 30_2]
gi|226909648|gb|EEH95566.1| ribonuclease P protein component [Citrobacter sp. 30_2]
Length = 119
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPTHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|120600876|ref|YP_965450.1| ribonuclease P [Shewanella sp. W3-18-1]
gi|146295082|ref|YP_001185506.1| ribonuclease P [Shewanella putrefaciens CN-32]
gi|166228248|sp|A4YCM4|RNPA_SHEPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228250|sp|A1RQF1|RNPA_SHESW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120560969|gb|ABM26896.1| ribonuclease P protein component [Shewanella sp. W3-18-1]
gi|145566772|gb|ABP77707.1| ribonuclease P protein component [Shewanella putrefaciens CN-32]
gi|319428595|gb|ADV56669.1| ribonuclease P protein component [Shewanella putrefaciens 200]
Length = 118
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 11 RLLTPAQFKSVFSNP-IKASSAEITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRII 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+++ RL + D V++ + + + E+ + R+ R
Sbjct: 70 RDSFRLNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRR 115
>gi|283781965|ref|YP_003372720.1| ribonuclease P protein component [Pirellula staleyi DSM 6068]
gi|283440418|gb|ADB18860.1| ribonuclease P protein component [Pirellula staleyi DSM 6068]
Length = 152
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ +F V + + + R+G ++++K G AV RNR +
Sbjct: 38 PKSLRLQTPAEFDAVFATRVFAADDQLIMHAAKST-LPFARLGLSISRKVGNAVVRNRWK 96
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR-NKRSYYSGKN 118
R ++EA R + G D V ++ A + L V+ +R KR+ +
Sbjct: 97 RLIREAFRQRQHQL-PPGIDLVARPQKGA-SPNLQLLERSIVDLAKRCLKRAERGPRP 152
>gi|302543967|ref|ZP_07296309.1| ribonuclease P protein component [Streptomyces hygroscopicus ATCC
53653]
gi|302461585|gb|EFL24678.1| ribonuclease P protein component [Streptomyces himastatinicus ATCC
53653]
Length = 127
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVL-----------NNNNSNLLPRVGFTVT 48
+ L++R+ FA + R G P + S R GF V+
Sbjct: 2 LPTEHRLRRRQDFAAAVRRGRRAGRPLLVVHFRSGLTSKNTDPHAPGESAPPARAGFVVS 61
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G AV RN ++RRL+ +R G V+ A A +L V+R
Sbjct: 62 KAVGGAVVRNLVKRRLRHLMRDRL-DHFPAGSLVVVRALPGAGEAGHDQLARDLDTAVQR 120
Query: 109 N 109
Sbjct: 121 L 121
>gi|116750021|ref|YP_846708.1| ribonuclease P protein component [Syntrophobacter fumaroxidans
MPOB]
gi|229470487|sp|A0LLH1|RNPA_SYNFM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|116699085|gb|ABK18273.1| ribonuclease P protein component [Syntrophobacter fumaroxidans
MPOB]
Length = 119
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L+ + VK+ G + F + N+ + R+G V K+ AV RNR++RR++
Sbjct: 13 LRASDDYQRVKRSGRRVRTAHFGVNFAANDLPHH--RLGLVVQKRYWNAVGRNRIKRRIR 70
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
E RL + D V++A+ A + ++ +
Sbjct: 71 EWFRLNKTRIPAPYRDIVVVARPGAEKLSSLDVTKELLAIF 111
>gi|161505629|ref|YP_001572741.1| ribonuclease P [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189043744|sp|A9MJT8|RNPA_SALAR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|160866976|gb|ABX23599.1| hypothetical protein SARI_03805 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 119
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ R + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRQRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 119
>gi|24371606|ref|NP_715648.1| ribonuclease P protein component [Shewanella oneidensis MR-1]
gi|29427754|sp|Q8EKT4|RNPA_SHEON RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|24345356|gb|AAN53093.1|AE015452_6 ribonuclease P protein component [Shewanella oneidensis MR-1]
Length = 118
Score = 67.9 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 11 RLLTPAQFKSVFSNP-IKASSAEITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+++ RL + D V++ + + + EL + R+ R
Sbjct: 70 RDSFRLNQHNI--PHLDIVVLVRNGVMEMENAELNKLIEKLWRKLSRR 115
>gi|113972269|ref|YP_736062.1| ribonuclease P [Shewanella sp. MR-4]
gi|114049518|ref|YP_740068.1| ribonuclease P [Shewanella sp. MR-7]
gi|117918467|ref|YP_867659.1| ribonuclease P [Shewanella sp. ANA-3]
gi|123324469|sp|Q0HD62|RNPA_SHESM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123325560|sp|Q0HPE4|RNPA_SHESR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166228249|sp|A0KR34|RNPA_SHESA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|113886953|gb|ABI41005.1| ribonuclease P protein component [Shewanella sp. MR-4]
gi|113890960|gb|ABI45011.1| ribonuclease P protein component [Shewanella sp. MR-7]
gi|117610799|gb|ABK46253.1| ribonuclease P protein component [Shewanella sp. ANA-3]
Length = 118
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L QF V K + +L NS PR+G TV K+ A +RNR++R +
Sbjct: 11 RLLTPAQFKSVFSNP-IKASSAEITLLAIPNSEQHPRLGLTVAKRYVKRANQRNRIKRVI 69
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+++ RL + D V++ + + + E+ + R+ R
Sbjct: 70 RDSFRLNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRR 115
>gi|255746811|ref|ZP_05420757.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262155891|ref|ZP_06029013.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|262167095|ref|ZP_06034810.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|255735568|gb|EET90967.1| ribonuclease P protein component [Vibrio cholera CIRS 101]
gi|262024481|gb|EEY43167.1| ribonuclease P protein component [Vibrio cholerae RC27]
gi|262030343|gb|EEY48985.1| ribonuclease P protein component [Vibrio cholerae INDRE 91/1]
gi|327482919|gb|AEA77326.1| Ribonuclease P protein component [Vibrio cholerae LMA3894-4]
Length = 107
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P ++ NN S+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQKVFQQAHSAGSPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRIC 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL N + +R R
Sbjct: 59 RESFRLHQNQLANK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 106
>gi|15804298|ref|NP_290337.1| ribonuclease P [Escherichia coli O157:H7 EDL933]
gi|15833893|ref|NP_312666.1| ribonuclease P [Escherichia coli O157:H7 str. Sakai]
gi|168748578|ref|ZP_02773600.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|168753595|ref|ZP_02778602.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|168772259|ref|ZP_02797266.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|168779928|ref|ZP_02804935.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|168786536|ref|ZP_02811543.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|168798741|ref|ZP_02823748.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208806396|ref|ZP_03248733.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208813040|ref|ZP_03254369.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208819513|ref|ZP_03259833.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209396527|ref|YP_002273232.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|217326050|ref|ZP_03442134.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254795707|ref|YP_003080544.1| ribonuclease P [Escherichia coli O157:H7 str. TW14359]
gi|261258902|ref|ZP_05951435.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
FRIK966]
gi|21263938|sp|Q8XB43|RNPA_ECO57 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|226741387|sp|B5YXA8|RNPA_ECO5E RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|12518543|gb|AAG58901.1|AE005601_7 RNase P, protein component; protein C5; processes tRNA, 4.5S RNA
[Escherichia coli O157:H7 str. EDL933]
gi|13364114|dbj|BAB38062.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
Sakai]
gi|187771399|gb|EDU35243.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4196]
gi|188016991|gb|EDU55113.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4113]
gi|189002536|gb|EDU71522.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4076]
gi|189359348|gb|EDU77767.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4401]
gi|189373418|gb|EDU91834.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC869]
gi|189378731|gb|EDU97147.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC508]
gi|208726197|gb|EDZ75798.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4206]
gi|208734317|gb|EDZ83004.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4045]
gi|208739636|gb|EDZ87318.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4042]
gi|209157927|gb|ACI35360.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
EC4115]
gi|209754090|gb|ACI75352.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754092|gb|ACI75353.1| 60 KD inner-membrane protein [Escherichia coli]
gi|209754096|gb|ACI75355.1| 60 KD inner-membrane protein [Escherichia coli]
gi|217322271|gb|EEC30695.1| ribonuclease P protein component [Escherichia coli O157:H7 str.
TW14588]
gi|254595107|gb|ACT74468.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
TW14359]
Length = 119
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 65 IKRLTRESFRLRQHEL--PAMDFVVVAKKGVANLDNRALSEALEKLWRRHCRLARGS 119
>gi|257437738|ref|ZP_05613493.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
gi|257200045|gb|EEU98329.1| ribonuclease P protein component [Faecalibacterium prausnitzii
A2-165]
Length = 152
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL RVG T TKK G AV+RNR RR +K
Sbjct: 26 IRRNSEFGRVYARGKSYVNPALVLYVLKTR--GKKTRVGLTATKKIGHAVQRNRARRVMK 83
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A+ + + G+D V +A+ + +L + + + ++
Sbjct: 84 AAIDEHLDQNI-GGYDLVFVARGMTPRLKSWQLSEVVARLFAQAGLPDKAKQPGAK 138
>gi|259910297|ref|YP_002650653.1| Ribonuclease P protein component [Erwinia pyrifoliae Ep1/96]
gi|224965919|emb|CAX57452.1| Ribonuclease P protein component [Erwinia pyrifoliae Ep1/96]
Length = 108
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L N+ PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPQRAGTPQITI--LGRLNALGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V++AK+ + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCRLAR 106
>gi|86150663|ref|ZP_01068884.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86150795|ref|ZP_01069011.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88596311|ref|ZP_01099548.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 84-25]
gi|153951419|ref|YP_001397948.1| ribonuclease P protein component [Campylobacter jejuni subsp.
doylei 269.97]
gi|157415222|ref|YP_001482478.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 81116]
gi|218562579|ref|YP_002344358.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283956366|ref|ZP_06373846.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 1336]
gi|9789793|sp|Q9PNX5|RNPA_CAMJE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226708|sp|A7H368|RNPA_CAMJD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|172047132|sp|A8FM14|RNPA_CAMJ8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|85838844|gb|EAQ56112.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85841965|gb|EAQ59211.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88191152|gb|EAQ95124.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360285|emb|CAL35080.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|152938865|gb|ABS43606.1| ribonuclease P protein component [Campylobacter jejuni subsp.
doylei 269.97]
gi|157386186|gb|ABV52501.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 81116]
gi|283792086|gb|EFC30875.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 1336]
gi|284926193|gb|ADC28545.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747864|gb|ADN91134.1| Ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni M1]
gi|315928322|gb|EFV07637.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315928510|gb|EFV07814.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 305]
gi|315932547|gb|EFV11480.1| ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni 327]
Length = 108
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN+ ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEK----KIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + Y+ +AK + + F L + +++ +
Sbjct: 57 SKRILRALFAKFERYLQDGK--YIFVAKNEITELSFSRLEKNLKWGLKKLE 105
>gi|50365497|ref|YP_053922.1| ribonuclease P protein component [Mesoplasma florum L1]
gi|60390402|sp|Q6F0D5|RNPA_MESFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|50364053|gb|AAT76038.1| ribonuclease P protein component [Mesoplasma florum L1]
Length = 110
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 12 QFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F + K E + F + N+ R G +V KK G AV RN+++R+++ ++
Sbjct: 12 EFQEIISKQEFHRNSAFVIYYSKND--KGYFRYGISVGKKLGNAVTRNKIKRQIRMMIQD 69
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+ + + +D V+IA+ + F + + V R +
Sbjct: 70 QIKILPEFSYDIVIIARNRMMQNSFDQNQKELNKLVVRFLK 110
>gi|315654391|ref|ZP_07907299.1| ribonuclease P protein component [Mobiluncus curtisii ATCC 51333]
gi|315491426|gb|EFU81043.1| ribonuclease P protein component [Mobiluncus curtisii ATCC 51333]
Length = 127
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 2/124 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ L + + F + + N + R+GF V K+ A RN
Sbjct: 2 LAKANRLTRAQDFRQAMREGRHAHCHNMVFHQYLGNGSEPARIGFVVAKRFVKHATGRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++RRL+ VR + V AK + + L N +R+ + ++F
Sbjct: 62 IKRRLRHLVRDRIAEFPAGSLN-VFYAKAGIAEVDYPRLENQIQILLRKMAHKQHGDRDF 120
Query: 120 SRKS 123
S
Sbjct: 121 VSPS 124
>gi|205356683|ref|ZP_03223444.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205345421|gb|EDZ32063.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 108
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN+ ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKIGKKWHCEGVIIFYLNSYEK----KIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + Y+ +AK + + F L + +++ +
Sbjct: 57 SKRILRALFAKFERYLQDGK--YIFVAKNEITELSFSRLEKNLKWGLKKLE 105
>gi|261213268|ref|ZP_05927550.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|262172773|ref|ZP_06040451.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262402087|ref|ZP_06078651.1| ribonuclease P protein component [Vibrio sp. RC586]
gi|260837542|gb|EEX64245.1| ribonuclease P protein component [Vibrio sp. RC341]
gi|261893849|gb|EEY39835.1| ribonuclease P protein component [Vibrio mimicus MB-451]
gi|262351733|gb|EEZ00865.1| ribonuclease P protein component [Vibrio sp. RC586]
Length = 107
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P ++ NN S+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQKVFQQAHSAGSPHLTIIARANNLSH--PRLGLAVPKKQIKTAVGRNRFKRLC 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ RL + D+V+IAK+ A + +EL N + +R R
Sbjct: 59 RESFRLHQNQLAHK--DFVVIAKKSAQDLSNEELFNLLGKLWQRLSRPSR 106
>gi|68537198|ref|YP_251903.1| ribonuclease P protein component [Corynebacterium jeikeium K411]
gi|123649953|sp|Q4JSC2|RNPA_CORJK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68264797|emb|CAI38285.1| ribonuclease P protein component [Corynebacterium jeikeium K411]
Length = 129
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEVLN------------NNNSNLLPRVGFTVTKKQ 51
L+ F ++ G + + VL + PR+G V+K
Sbjct: 6 YRLRSTALFGQTIRNGRKKGSRTVVVHVLAGGSRAEELPLPLQEGATAGPRMGLVVSKAV 65
Query: 52 GCAVERNRMRRRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
G AV R+ R+L+ A R E G V+ A + F+EL +RR
Sbjct: 66 GNAVTRHNTSRKLRHAFRAVMEEDSLDFPVGTTVVIRALPKSATASFEELVGDVRSCIRR 125
Query: 109 N 109
Sbjct: 126 A 126
>gi|87122921|ref|ZP_01078786.1| ribonuclease P protein component [Marinomonas sp. MED121]
gi|86161794|gb|EAQ63094.1| ribonuclease P protein component [Marinomonas sp. MED121]
Length = 132
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 5/124 (4%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L + V F L ++ + K + AV RNR
Sbjct: 7 PRQVRLLTAGDYQTVFNHTSCKVFAGEFLLLATKRDDDLSRLGL-IVAKKNEKRAVGRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++E+ R + G D V +A++ + L + + + N
Sbjct: 66 IKRLVRESFRHHKVELA--GFDVVFLARQGIKELDNPTLAKRIDKAWHQLIKRSKKANNQ 123
Query: 120 SRKS 123
+ +
Sbjct: 124 PKDT 127
>gi|326386365|ref|ZP_08207988.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209026|gb|EGD59820.1| ribonuclease P protein component [Novosphingobium nitrogenifigens
DSM 19370]
Length = 119
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L V + R G TVT+K G AV RNRM+RR + +R G D+VLI +
Sbjct: 1 MLLVKPGVRAPAQARFGVTVTRKIGNAVFRNRMKRRFRALLREILPTRGLAGADHVLIGR 60
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
+ F L + + R R
Sbjct: 61 EGGVERDFTLLRQELEQALARAVAGKGDPPRRPRD 95
>gi|256827815|ref|YP_003151774.1| ribonuclease P protein component [Cryptobacterium curtum DSM 15641]
gi|256583958|gb|ACU95092.1| ribonuclease P protein component [Cryptobacterium curtum DSM 15641]
Length = 112
Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMR 61
+ +K +L+ +G +L + ++ + RV F KK G AV RN +
Sbjct: 1 METIKASTDISLLFSQGTRFSTSCITLLAIQVDDQHDPVGRVAFIAGKKLGNAVWRNMAK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR++ G+ V +AK + + ++ + + +RR
Sbjct: 61 RRMRSICHELGGPWD--GYHIVFLAKASLMNQEYSKVLHACQKLLRRM 106
>gi|261250644|ref|ZP_05943219.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
gi|260939213|gb|EEX95200.1| ribonuclease P protein component [Vibrio orientalis CIP 102891]
Length = 107
Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P F++ N+ S+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQNVFQQAHRAGSPHFTIIARKNSLSH--PRLGLAVPKKQIKTAVGRNRFKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + DYV+IAK+ A + +E+ F + +R R
Sbjct: 59 RESFRNNQHQLAHK--DYVVIAKKTAQDLSNEEIFKLFDKLWQRLSRPSR 106
>gi|294790222|ref|ZP_06755380.1| ribonuclease P [Scardovia inopinata F0304]
gi|294458119|gb|EFG26472.1| ribonuclease P [Scardovia inopinata F0304]
Length = 133
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 16/117 (13%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKK F V K + + + R+G V+K G AV+RN+++RR +
Sbjct: 3 RLKKHDDFLAVLKTRKKAVSKDLVVHYKISGQTGRLRLGLAVSKAVGHAVDRNKVKRRFR 62
Query: 66 EAVRLCAEGVLKH----------------GHDYVLIAKRDALFIPFKELCNHFVERV 106
R + D V+ AK A + F +L +
Sbjct: 63 VLARRHENLLKIPLASDDSADSVDLCRFLSLDCVMRAKPSAAHVTFNQLDKQVEKLF 119
>gi|262392788|ref|YP_003284642.1| ribonuclease P protein component [Vibrio sp. Ex25]
gi|262336382|gb|ACY50177.1| ribonuclease P protein component [Vibrio sp. Ex25]
Length = 107
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P F++ N S+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQNVFQQAHRAGSPHFTIIARKNKLSH--PRLGLAVPKKQIKTAVGRNRFKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 59 RESFRNNQHQL--PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 106
>gi|257465187|ref|ZP_05629558.1| ribonuclease P protein component [Actinobacillus minor 202]
gi|257450847|gb|EEV24890.1| ribonuclease P protein component [Actinobacillus minor 202]
Length = 114
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 12 QFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + + P +L L N +PR+G TV K A +RNR++R ++E R
Sbjct: 6 QFKAVFENPQRASTPQMTL--LAKANDAEVPRLGLTVAKKHLKRAHDRNRIKRIVRETFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
L + D+V +AK + L + R+ R + +K
Sbjct: 64 LKQHEL--PCADFVFVAKAGIGKLDNATLFETLEKLWARHIRLSKNPAPPVQK 114
>gi|238783047|ref|ZP_04627074.1| Ribonuclease P protein component [Yersinia bercovieri ATCC 43970]
gi|238797846|ref|ZP_04641338.1| Ribonuclease P protein component [Yersinia mollaretii ATCC 43969]
gi|238716048|gb|EEQ08033.1| Ribonuclease P protein component [Yersinia bercovieri ATCC 43970]
gi|238718262|gb|EEQ10086.1| Ribonuclease P protein component [Yersinia mollaretii ATCC 43969]
Length = 108
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPSHFTFVFQQPLRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 59 RESFRLHQHTL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCR 103
>gi|297158789|gb|ADI08501.1| RNase P component [Streptomyces bingchenggensis BCW-1]
Length = 127
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 13/121 (10%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN------------NSNLLPRVGFTVT 48
+ L++R FA + R G + + S R GF V+
Sbjct: 2 LPTEKRLRRREDFAAAVRRGRRAGRPLLVVHYRSGLASGETDPHAPGESAPPARAGFVVS 61
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K G AV RN ++RRL+ +R G V+ A A +L VRR
Sbjct: 62 KAVGGAVVRNLVKRRLRHLMRDRL-DHFPAGSLVVVRALPGAGEAGHDQLARDLDTAVRR 120
Query: 109 N 109
Sbjct: 121 L 121
>gi|125718924|ref|YP_001036057.1| ribonuclease P protein component [Streptococcus sanguinis SK36]
gi|125498841|gb|ABN45507.1| Ribonuclease P protein component, putative [Streptococcus sanguinis
SK36]
Length = 88
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
RVG +V+KK G AV RNR++R+++ + + +++ D+V+IA++ +
Sbjct: 3 EKEQKHFRVGISVSKKLGNAVVRNRIKRKIRHVLMQHQKQLVQA--DFVVIARKGVEELD 60
Query: 95 FKELCNHFVERVRRNK 110
+ ++ + + ++ K
Sbjct: 61 YHQVEQNLLHVLKIAK 76
>gi|117927033|ref|YP_867650.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
gi|117610789|gb|ABK46244.1| ribonuclease P protein component [Magnetococcus sp. MC-1]
Length = 130
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L + F V + + F L + + S PRVG TV++K G A RNR+
Sbjct: 19 PKSARLLTAKAFRQVLAAQNRVQSRAFVLY--SRDGSGADPRVGLTVSRKVGKAYVRNRI 76
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+R +E R + + G D+VLIA+ A + L +
Sbjct: 77 KRVARELFRSNRQRLA-FGRDFVLIARNRAASMDNDALRGELNRLFK 122
>gi|23465225|ref|NP_695828.1| ribonuclease P protein component [Bifidobacterium longum NCC2705]
gi|189440300|ref|YP_001955381.1| RNase P protein component [Bifidobacterium longum DJO10A]
gi|227547515|ref|ZP_03977564.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239622845|ref|ZP_04665876.1| ribonuclease P protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296455144|ref|YP_003662288.1| ribonuclease P protein component [Bifidobacterium longum subsp.
longum JDM301]
gi|312133634|ref|YP_004000973.1| rnpa [Bifidobacterium longum subsp. longum BBMN68]
gi|317482357|ref|ZP_07941377.1| ribonuclease P [Bifidobacterium sp. 12_1_47BFAA]
gi|322690181|ref|YP_004209915.1| ribonuclease P [Bifidobacterium longum subsp. infantis 157F]
gi|322692116|ref|YP_004221686.1| ribonuclease P [Bifidobacterium longum subsp. longum JCM 1217]
gi|29427810|sp|Q8G6J8|RNPA_BIFLO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808047|sp|B3DP24|RNPA_BIFLD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23325854|gb|AAN24464.1| ribonuclease P protein component [Bifidobacterium longum NCC2705]
gi|189428735|gb|ACD98883.1| RNase P protein component [Bifidobacterium longum DJO10A]
gi|227212030|gb|EEI79926.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239514842|gb|EEQ54709.1| ribonuclease P protein [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296184577|gb|ADH01459.1| ribonuclease P protein component [Bifidobacterium longum subsp.
longum JDM301]
gi|311772892|gb|ADQ02380.1| RnpA [Bifidobacterium longum subsp. longum BBMN68]
gi|316916237|gb|EFV37639.1| ribonuclease P [Bifidobacterium sp. 12_1_47BFAA]
gi|320456972|dbj|BAJ67594.1| ribonuclease P [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461517|dbj|BAJ72137.1| ribonuclease P [Bifidobacterium longum subsp. infantis 157F]
Length = 119
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQGCAVE 56
+ L+ R F V K + G + + + R+G V+K G AV
Sbjct: 1 MERLQSHRDFVTVLKRRRKAGGKDIVVHYLVPDDHHDDDDRTVHRRLGLAVSKSVGHAVT 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR + R +L D VL AK A F L +
Sbjct: 61 RNTVKRRFRVLARAHE-DLLPAHCDIVLRAKPSAATASFASLDQQIAKAFATVAHK 115
>gi|330861749|emb|CBX71923.1| ribonuclease P protein component [Yersinia enterocolitica W22703]
Length = 108
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPSHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 59 RESFRLHQHTL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCR 103
>gi|254510261|ref|ZP_05122328.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
gi|221533972|gb|EEE36960.1| ribonuclease P protein component [Rhodobacteraceae bacterium KLH11]
Length = 90
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 27 FSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
++ + RVGFT +KK G AV RNR +RRL+EA R + G DYVLI
Sbjct: 1 MMVQARKRGTDEIVGIRVGFTCSKKVGNAVARNRAKRRLREAARTVLSTQGRDGWDYVLI 60
Query: 86 AKRDA-LFIPFKELCNHFVERVRRNKRSYY 114
+ + P+ L + +R+ +
Sbjct: 61 GRAEVTATRPYDALLDDLRYALRKLHDNRK 90
>gi|307721587|ref|YP_003892727.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
gi|306979680|gb|ADN09715.1| ribonuclease P protein component [Sulfurimonas autotrophica DSM
16294]
Length = 103
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+K ++F V KG+ + L L + +VGFT TKK G AV+RNR +RRL+
Sbjct: 1 MKLHKEFQYVYNKGKNQHSQSVVLFFLPQP---GVRKVGFTATKKLGNAVKRNRAKRRLR 57
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++ YV +AK PF++L N F + + R K
Sbjct: 58 ALFCEYSDSF--KDGTYVFVAKAAIFDAPFEKLTNDFNKVLSRAK 100
>gi|320531081|ref|ZP_08032110.1| ribonuclease P protein component [Selenomonas artemidis F0399]
gi|320136663|gb|EFW28616.1| ribonuclease P protein component [Selenomonas artemidis F0399]
Length = 130
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S I+K+R F V KG G + L +L ++ + +VGF KK G A R+R
Sbjct: 8 LSRAQIIKRRSDFQNVYHKGTAFPGRYMILYILR--DARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++EA RL + + +LI + ++ + RR K +G
Sbjct: 66 IKRLMREAYRLMQHEL-RPDVGILLIGRAGLADHKMQDAAADLKKLARRAKILIPAGHAP 124
Query: 120 SRK 122
R+
Sbjct: 125 RRE 127
>gi|306834797|ref|ZP_07467861.1| ribonuclease P [Corynebacterium accolens ATCC 49726]
gi|304569325|gb|EFM44826.1| ribonuclease P [Corynebacterium accolens ATCC 49726]
Length = 109
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 14/102 (13%)
Query: 20 ELRKGPFFSLEVLNNNNSNL-------------LPRVGFTVTKKQGCAVERNRMRRRLKE 66
+ + + ++N PR G V+K G AV R+R RRL+
Sbjct: 5 RRQGTRTVVVHARDTMSANSNGTMGNPAEIAATGPRFGLIVSKAVGNAVVRHRTSRRLRH 64
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ G D V+ A + ++L + +R+
Sbjct: 65 VCMTLIPKL-PAGVDVVIRALPASATATSEQLEKDITKALRK 105
>gi|126176563|ref|YP_001052712.1| ribonuclease P [Shewanella baltica OS155]
gi|153002877|ref|YP_001368558.1| ribonuclease P [Shewanella baltica OS185]
gi|160877624|ref|YP_001556940.1| ribonuclease P [Shewanella baltica OS195]
gi|217975465|ref|YP_002360216.1| ribonuclease P [Shewanella baltica OS223]
gi|166226739|sp|A3DAT0|RNPA_SHEB5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226740|sp|A6WUK6|RNPA_SHEB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043746|sp|A9KX22|RNPA_SHEB9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808085|sp|B8EDW7|RNPA_SHEB2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|125999768|gb|ABN63843.1| ribonuclease P protein component [Shewanella baltica OS155]
gi|151367495|gb|ABS10495.1| ribonuclease P protein component [Shewanella baltica OS185]
gi|160863146|gb|ABX51680.1| ribonuclease P protein component [Shewanella baltica OS195]
gi|217500600|gb|ACK48793.1| ribonuclease P protein component [Shewanella baltica OS223]
gi|315269823|gb|ADT96676.1| ribonuclease P protein component [Shewanella baltica OS678]
Length = 118
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
S L QF V K + +L N+ PR+G TV K+ A +RNR+
Sbjct: 7 SRELRLLTPAQFKSVFSNP-IKASSAEITLLAIPNTEQHPRMGLTVAKRFVKRANQRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R ++++ RL + D V++ + + + E+ + R+ R
Sbjct: 66 KRVIRDSFRLNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRR 115
>gi|71894610|ref|YP_278718.1| ribonuclease P protein component [Mycoplasma synoviae 53]
gi|123643936|sp|Q4A5G4|RNPA_MYCS5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71851398|gb|AAZ44007.1| ribonuclease P protein component [Mycoplasma synoviae 53]
Length = 112
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F LV K + + + +VG TV KK +V RN
Sbjct: 1 MKKQYRLRKNWEFDLVLKNKKFIANKYVIVYYKKA----SAFKVGITVPKKFANSVGRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R++K V + + ++ V+I +++ + F + + K+
Sbjct: 57 HKRQMKAIV--HKMNLYNYPYEMVIIIRKNFINCNFLTKVIEIEKIFTQFKQQNEK 110
>gi|262374717|ref|ZP_06067989.1| ribonuclease P [Acinetobacter junii SH205]
gi|262310373|gb|EEY91465.1| ribonuclease P [Acinetobacter junii SH205]
Length = 131
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
++ + V G L K L R+G V KK A ERNR++R
Sbjct: 11 RIRCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLA 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E+ RL D V++ K I KEL ++ +R
Sbjct: 71 RESFRLHQAQFD-ADIDIVVMPKVGIEAIANKELHQQLDFAWQKLQRLAKK 120
>gi|260774976|ref|ZP_05883876.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609066|gb|EEX35225.1| ribonuclease P protein component [Vibrio coralliilyticus ATCC
BAA-450]
Length = 107
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V + P F++ NN+ PR+G V KKQ RNR +R
Sbjct: 1 MLTPEHYQNVFQQAHRAGSPHFTIIA--RNNNLSHPRLGLAVPKKQIKTAVGRNRFKRLA 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 59 RESFRNNQHQLAHK--DFVVIAKKSAQDLSNEEMFKLFDKLWQRLSRPSR 106
>gi|240138940|ref|YP_002963415.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
gi|240008912|gb|ACS40138.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens AM1]
Length = 165
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTDRMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRK 122
+ S +
Sbjct: 121 TPRSSDSAR 129
>gi|46397714|sp|Q7X5L0|RNPA_THEOS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908461|gb|AAO88973.1| RNase P protein subunit [Thermus oshimai]
Length = 151
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK F +++G +G + ++ L RVG V+KK G V RNR++
Sbjct: 50 LKSLKGDSAFRRLRQGRTGRGRYVTVRWLPAPE----LRVGIVVSKKVGKTVVRNRVK-- 103
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +L+A +A F EL ++++
Sbjct: 104 --RRLREILRRLHLPRAHLLLVATPEAREAGFAELFQDLTRALKKS 147
>gi|157363656|ref|YP_001470423.1| ribonuclease P protein component [Thermotoga lettingae TMO]
gi|157314260|gb|ABV33359.1| ribonuclease P protein component [Thermotoga lettingae TMO]
Length = 121
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L+ R F V + G + + ++ + N+ + R+G V +K G A +RN+
Sbjct: 10 LRRTERLRFSRDFDRVFRFGAVIQSELLTILYVGNDLEHN--RIGVIVKRKFGKAHDRNK 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD----ALFIPFKELCNHFVERVRRNK 110
+RR +KE RL + D V++ ++ IP++E C H + ++R K
Sbjct: 68 IRRWIKEIYRLKKHDL-NKSFDIVVLPRKTLSDIFKDIPYEEFCKHLTDLLKRIK 121
>gi|304414289|ref|ZP_07395657.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
gi|304283503|gb|EFL91899.1| RNase P protein component [Candidatus Regiella insecticola LSR1]
Length = 114
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L FA V + + G + L N PR+GF + K+ A ERNR+
Sbjct: 7 PRELRLLTPASFAFVFQQPKQAGTPQ-ITFLGRMNELGHPRIGFAIAKKQIKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RR ++E+ RL + D+V++AK+ A+ + L + R
Sbjct: 66 RRLIRESFRLRQHQL--PSMDFVVLAKKGAVELDNLVLAKMLEKLWHR 111
>gi|6094113|sp|O86449|RNPA_PSEAO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3341478|emb|CAA04148.1| RNase P protein [Pseudanabaena sp. PCC 6903]
Length = 116
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ N L++R FA V KG+ +G + SL++L ++N+ R+G V+KK AV RN
Sbjct: 2 LPNQNRLRRREDFAKVYAKGDRYRGTYLSLKILFDSNT-TYTRIGIVVSKKVSKLAVTRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R +R+L+ R + K G V+ A ++EL + + + K
Sbjct: 61 RFKRQLRAIFRQLLSQL-KDGLQIVVTVTTVASKPNYQELGDDLKNILAKAK 111
>gi|219871957|ref|YP_002476332.1| ribonuclease P [Haemophilus parasuis SH0165]
gi|219692161|gb|ACL33384.1| ribonuclease P [Haemophilus parasuis SH0165]
Length = 136
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + P +L L+ N R+G TV K A +RNR
Sbjct: 17 PRELRLLAPVQFKAVFELPLRASTPQLTL--LSRQNDIEHARIGLTVAKKHLKRAHDRNR 74
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++E+ RL + +D+V +AK + +EL + +R+ R
Sbjct: 75 IKRIVRESFRLKQHQL--PAYDFVFVAKGGIGKLSNQELFETLDKLWQRHIRLAQK 128
>gi|331700393|ref|YP_004336632.1| Ribonuclease P protein component [Pseudonocardia dioxanivorans
CB1190]
gi|326955082|gb|AEA28779.1| Ribonuclease P protein component [Pseudonocardia dioxanivorans
CB1190]
Length = 119
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L +R +F + R G + L+ + S+ PR GF V+K G AV R+R+ RRL
Sbjct: 6 ARLTRRDEFTTTMRHGRRSGRSRLVVHLDVSGSD-APRAGFVVSKAVGNAVVRHRVSRRL 64
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+ V + G V+ A + EL +R R
Sbjct: 65 RHVVAPRLGAL-PAGARLVVRALPASATASSAELAADLDGALRTAVRRLAEPAAR 118
>gi|254561548|ref|YP_003068643.1| ribonuclease P protein component [Methylobacterium extorquens DM4]
gi|254268826|emb|CAX24787.1| ribonuclease P protein component (RNaseP protein, RNase P protein,
protein C5) [Methylobacterium extorquens DM4]
Length = 165
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGC 53
M I L++R F +G S + + S +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPSETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRK 122
+ S +
Sbjct: 121 TPRSSDSAR 129
>gi|172041703|ref|YP_001801417.1| ribonuclease P protein component [Corynebacterium urealyticum DSM
7109]
gi|238056790|sp|B1VJ37|RNPA_CORU7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171853007|emb|CAQ05983.1| ribonuclease P protein component [Corynebacterium urealyticum DSM
7109]
Length = 127
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 15/122 (12%)
Query: 5 CILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNL-------LPRVGFTVTKKQGCAVE 56
L+ F+ V KKG + + + PR G V+K G AV
Sbjct: 6 HRLRSSALFSTVVKKGARKGSRTLVVHLWTPEPGPDAPLELTGGPRAGLIVSKAVGNAVV 65
Query: 57 RNRMRRRLKEAVRLCAEG-------VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R+ + R+L+ + + L+ V+ A + KEL + + R
Sbjct: 66 RHAVSRKLRAVLATIIDEDATAASPQLQETSFVVVRALPGSAEASSKELESDVRRCLSRL 125
Query: 110 KR 111
R
Sbjct: 126 SR 127
>gi|315225753|ref|ZP_07867541.1| ribonuclease P protein component [Parascardovia denticolens DSM
10105]
gi|315119885|gb|EFT83017.1| ribonuclease P protein component [Parascardovia denticolens DSM
10105]
Length = 150
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 33/150 (22%)
Query: 4 ICILKKRRQFALVKKGEL-RKGPFFSLEVLN-------------------------NNNS 37
+ LK R F V K L N +S
Sbjct: 1 MERLKSHRDFVAVLKHRRKVSTRDLVLHYRLQDLSSGLSSPADSQREVADPSPKGFNGSS 60
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-------YVLIAKRDA 90
+ +G V+K G AVERN+++RR + R + + D V+ AK
Sbjct: 61 DQPIYLGLAVSKAVGHAVERNKVKRRFRVLARKYEPLLAQALKDRPGTRLSLVMRAKPQT 120
Query: 91 LFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+PF +L + + R
Sbjct: 121 AHVPFADLDQQVEKAFVKLVRQMNGSDGRP 150
>gi|162450794|ref|YP_001613161.1| putative ribonuclease P protein component [Sorangium cellulosum 'So
ce 56']
gi|161161376|emb|CAN92681.1| putative ribonuclease P protein component [Sorangium cellulosum 'So
ce 56']
Length = 187
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 23/133 (17%)
Query: 11 RQFALVKKGE-LRKGPFFSLEVLNNNN------------------SNLLPRVGFTVTKKQ 51
+F ++ G V + PR+G ++K
Sbjct: 25 AEFVRIQNGGHRVSTRHLLFLVAAPTEGAAHGGARRGTKSAAAPVPSGAPRLGLVASRKV 84
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRR 108
G AV RNR +R L+EA R + D V+I + A + ++ +RR
Sbjct: 85 GGAVARNRAKRLLREAFR-RFPELFPERVDIVVILRTGAGSLGLDDVLAELRGVVPVLRR 143
Query: 109 NKRSYYSGKNFSR 121
+ + + +R
Sbjct: 144 RAKEALTAASRAR 156
>gi|296105490|ref|YP_003615636.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059949|gb|ADF64687.1| ribonuclease P [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 108
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPAHFTFVFQQPLRAGTPQITI--LGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PSMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 108
>gi|21233658|ref|NP_639575.1| ribonuclease P [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770624|ref|YP_245386.1| ribonuclease P [Xanthomonas campestris pv. campestris str. 8004]
gi|188993862|ref|YP_001905872.1| ribonuclease P [Xanthomonas campestris pv. campestris str. B100]
gi|24638172|sp|Q8P337|RNPA_XANCP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|81303429|sp|Q4UNK7|RNPA_XANC8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229890168|sp|B0RMM7|RNPA_XANCB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21115531|gb|AAM43457.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575956|gb|AAY51366.1| ribonuclease P protein component [Xanthomonas campestris pv.
campestris str. 8004]
gi|167735622|emb|CAP53840.1| ribonuclease P, protein component [Xanthomonas campestris pv.
campestris]
Length = 148
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R + + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDTARRTSDPLLSLHWRSGET--PPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|238750291|ref|ZP_04611793.1| Ribonuclease P protein component [Yersinia rohdei ATCC 43380]
gi|238711524|gb|EEQ03740.1| Ribonuclease P protein component [Yersinia rohdei ATCC 43380]
Length = 108
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L N PR+G T+ K A ERNR++R
Sbjct: 1 MLTPSHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTIAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 59 RESFRLHQHTL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCR 103
>gi|217966561|ref|YP_002352067.1| ribonuclease P protein component [Dictyoglomus turgidum DSM 6724]
gi|226736862|sp|B8DYS1|RNPA_DICTD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|217335660|gb|ACK41453.1| ribonuclease P protein component [Dictyoglomus turgidum DSM 6724]
Length = 119
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 2 SNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
LKK+ F + + F + + R+G +V KK G AV RN+
Sbjct: 7 PKEERLKKQEDFLRILREGKPYSLSKNFVVYIRKGAEKR---RIGISVNKKVGKAVVRNK 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD--ALFIPFKELCNHFVERVRRN 109
++R ++E RL + K + ++I K + F ++ ++ +
Sbjct: 64 IKRLIREVYRLHRPYL-KEDIEMLVIVKPGENIKNLDFHKVKEMLIKIWEKA 114
>gi|254818677|ref|ZP_05223678.1| ribonuclease P [Mycobacterium intracellulare ATCC 13950]
Length = 112
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL--PRVGFTVTKKQGCAVERNRMRRR 63
+ + +F VK G P + + P VG V K G AVER+R+ RR
Sbjct: 1 MTRSIEFDATVKHGIRMAQPDIVVHFRRETDGGDATAPHVGLVVGKPVGSAVERHRVARR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+ R + V+ A + L +RR
Sbjct: 61 LRHVARTILGDLQDSD-RLVIRALPSSRTASSARLEQELRRCLRRM 105
>gi|170026452|ref|YP_001722957.1| ribonuclease P [Yersinia pseudotuberculosis YPIII]
gi|186897492|ref|YP_001874604.1| ribonuclease P [Yersinia pseudotuberculosis PB1/+]
gi|169752986|gb|ACA70504.1| ribonuclease P protein component [Yersinia pseudotuberculosis
YPIII]
gi|186700518|gb|ACC91147.1| ribonuclease P protein component [Yersinia pseudotuberculosis
PB1/+]
Length = 108
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPSHFTFVFQQPQRAGTPQITI--LGRLNELGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++ K+ + + L + RR+ R
Sbjct: 59 RESFRLHQHAL--PSMDFVVLVKKGVADLDNRALTEALEKLWRRHCR 103
>gi|320539852|ref|ZP_08039511.1| protein C5 component of RNase P [Serratia symbiotica str. Tucson]
gi|320030038|gb|EFW12058.1| protein C5 component of RNase P [Serratia symbiotica str. Tucson]
Length = 108
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + P ++ L N PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPLRAGTPQITI--LGRLNKLGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ R + D+V++AK+ + L + RR+ R
Sbjct: 59 RESFRQRQHEL--PAMDFVVVAKKGIADLDNCALTETLEKLWRRHCR 103
>gi|296444657|ref|ZP_06886621.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
gi|296257925|gb|EFH04988.1| ribonuclease P protein component [Methylosinus trichosporium OB3b]
Length = 139
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 20 ELRKGPFFSLEVLNNN-NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
+ G F L+ + PR G TVTKK AV RNR+RRRL+EA+RLC
Sbjct: 29 QRSGGAAFKLQAAAREGDDEAPPRFGLTVTKKVAGAVGRNRIRRRLREALRLCGAAGALP 88
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
G+DYV IA+ AL +PF EL E + + + + + ++
Sbjct: 89 GYDYVFIARPGALTMPFAELEAQMAEALAKLRPRASGPQPRNSRA 133
>gi|218530583|ref|YP_002421399.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
gi|218522886|gb|ACK83471.1| ribonuclease P protein component [Methylobacterium chloromethanicum
CM4]
Length = 165
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGC 53
M I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MPTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPGETRDGATAEGLFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A G D V+IA+R AL PF L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAADAPAIGADVVVIARRPALDAPFDSLVADLRRALHSVTRPA 120
Query: 114 YSGKNFSRK 122
+ S +
Sbjct: 121 TPRSSDSAR 129
>gi|322513808|ref|ZP_08066894.1| ribonuclease P protein component [Actinobacillus ureae ATCC 25976]
gi|322120376|gb|EFX92306.1| ribonuclease P protein component [Actinobacillus ureae ATCC 25976]
Length = 142
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L QF V + P ++ L +N +PR+G TV K A +RNR
Sbjct: 28 SRELRLLAPTQFKAVFEQPFRASTPELTI--LARHNHLDIPRLGLTVAKKHLKRAHDRNR 85
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
++R ++E+ RL + D+V +AK + L + R+ R +
Sbjct: 86 IKRIVRESFRLKQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWVRHIRLAKKPQA 142
>gi|163795449|ref|ZP_02189416.1| Ribonuclease P protein component [alpha proteobacterium BAL199]
gi|159179435|gb|EDP63966.1| Ribonuclease P protein component [alpha proteobacterium BAL199]
Length = 126
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLL----PRVGFTVTKKQGCAVERNR 59
+ L R F +G P L+V + PRVGFT ++K G AV RNR
Sbjct: 9 LSRLLSRADFLRAARGVKAVAPGLVLQVRRRSPDETGDDTRPRVGFTASRKVGNAVVRNR 68
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RRRL+ AV + G DYVLIA+ + EL + + R +
Sbjct: 69 SRRRLRAAVTDVLSARAEAGFDYVLIARAGTAERTYDELLADLGKALDRARSGKGRRS 126
>gi|113460281|ref|YP_718339.1| ribonuclease P [Haemophilus somnus 129PT]
gi|170718323|ref|YP_001785334.1| ribonuclease P [Haemophilus somnus 2336]
gi|122945112|sp|Q0I0Y9|RNPA_HAES1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043736|sp|B0URU5|RNPA_HAES2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|112822324|gb|ABI24413.1| ribonuclease P protein component [Haemophilus somnus 129PT]
gi|168826452|gb|ACA31823.1| ribonuclease P protein component [Haemophilus somnus 2336]
Length = 119
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
S L F V + P ++ NN + R+G TV K A +RNR
Sbjct: 7 SRELRLLTPSHFKCVFQKPLRVSTPEITILARKNNLEH--SRLGLTVAKKHLKRAHDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + +D+V+I K+ + ++L + +R+ R
Sbjct: 65 VKRISRESFRLLQGQLA--NYDFVIITKKGIGNLDNQQLFQTLDKLWKRHIRLVQKS 119
>gi|218885992|ref|YP_002435313.1| ribonuclease P [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756946|gb|ACL07845.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 180
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R + KG F L VL + S R+G VT+K G AV+RNR+
Sbjct: 10 NRLVRRPDYLACYDKGRRLFTKHFVLFVLFDLDRTASPEGWRLGLAVTRKTGSAVQRNRV 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+R L+E RL ++ D +++ KR
Sbjct: 70 KRVLREFFRLH-RALMPGDVDVIVVPKR 96
>gi|251791871|ref|YP_003006591.1| ribonuclease P [Aggregatibacter aphrophilus NJ8700]
gi|247533258|gb|ACS96504.1| ribonuclease P protein component [Aggregatibacter aphrophilus
NJ8700]
Length = 122
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L F V + R + +L N+ PR+G TV K A RNR+
Sbjct: 7 PRELRLLTPEHFKYVFQQPFRASSP-EITILARKNNLEHPRLGLTVAKKHLKRANARNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R +E+ RL + +D+V++AK+ + + L + R
Sbjct: 66 KRLCRESFRLSQHSL--PSYDFVIVAKQGIGRLDNRTLWQTLDKLWLR 111
>gi|33151920|ref|NP_873273.1| ribonuclease P [Haemophilus ducreyi 35000HP]
gi|48474364|sp|Q7VN34|RNPA_HAEDU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33148141|gb|AAP95662.1| ribonuclease P protein component [Haemophilus ducreyi 35000HP]
Length = 123
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R L +L N PR+G TV K A +RNR+
Sbjct: 7 SRELRLLAPIQFKAVFEQPYRASTA-ELTILARQNCVNTPRLGLTVAKKHLKRAHDRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ RL + D+V +AK + L + R+ R ++ +
Sbjct: 66 KRIVRESFRLKQHQL--PNFDFVFVAKHGIGKLDNATLFATIDKLWTRHIRLSQQAQSKN 123
>gi|328477492|gb|EGF47593.1| ribonuclease P [Lactobacillus rhamnosus MTCC 5462]
Length = 103
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVL 76
G+ F + + + RVG +V KK G AV RN+++R +++++ +
Sbjct: 4 HGDSVANRNFVIYHMKRD--QPHFRVGISVGKKVGHTAVMRNQIKRYIRQSLLELKPEID 61
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
D+++IA++ A + E + + +R
Sbjct: 62 PQ-TDFLVIARKSANQLDMAETKKNLIHVMR 91
>gi|90415382|ref|ZP_01223316.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2207]
gi|90332705|gb|EAS47875.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2207]
Length = 124
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRL 64
L K + V + +L +L+ N R+G + KK AV RN+++R +
Sbjct: 11 RLLKSSDYTEVFDNNSVRVAHPNLLILSQPNGTETSRLGLVIGKKNVPTAVARNKIKRVV 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+E RL L D V +A++D + EL + R N
Sbjct: 71 RETFRLTE---LPVAVDLVFLARKDLGKLSSAELAALIRQSWGRLTARLNKEINR 122
>gi|290477352|ref|YP_003470273.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus bovienii SS-2004]
gi|289176706|emb|CBJ83515.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus bovienii SS-2004]
Length = 108
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ F V + R + +L N PR+G TV K A ERNR++R +
Sbjct: 1 MLTPEHFTYVFQQPQRASSA-EITILGRLNELGHPRIGLTVAKKNVKRAHERNRIKRLAR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
E+ RL + D+V++ ++ + +EL + RR+ R
Sbjct: 60 ESFRLNQHNL--PSMDFVVLVRKGVAELDNRELTEALGKLWRRHCRLVRGS 108
>gi|149175832|ref|ZP_01854450.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
gi|148845279|gb|EDL59624.1| probable ribonuclease P protein component [Planctomyces maris DSM
8797]
Length = 134
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
++ ++ F + + R G L N R+G +V+KK G A++R R +R L
Sbjct: 24 HRIRSQQDFDAIYAAKQRAGDQNLLLFAIR-NELPCTRLGVSVSKKNGNAIQRARKKRLL 82
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+EA RL + G D + I + D L K ++ KR
Sbjct: 83 REAFRLIRSQL-PAGLDLIAIPRAD-LDGDLKGYQKSLKYLSQKLKRRLEQQSG 134
>gi|170783402|ref|YP_001711736.1| ribonuclease P protein component [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157972|emb|CAQ03182.1| ribonuclease P protein component [Clavibacter michiganensis subsp.
sepedonicus]
Length = 106
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+ + V++G + L S+ R GF V+KK G AV RN +RRRLK
Sbjct: 1 MTSGADYRTIVRRGRRTSTGTAVVSALAGP-SDAPTRFGFIVSKKVGNAVTRNLVRRRLK 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ G V+ + L V R R+
Sbjct: 60 AVTAGLLPTLC-PGVSIVIRVLPGMERTAWDTLQEEIASAVTRAVRTL 106
>gi|325577777|ref|ZP_08148052.1| ribonuclease P protein component [Haemophilus parainfluenzae ATCC
33392]
gi|325160522|gb|EGC72648.1| ribonuclease P protein component [Haemophilus parainfluenzae ATCC
33392]
Length = 111
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ QF V + R + +L N+ PR+G TV K A +RNR++R ++
Sbjct: 1 MLTPTQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHDRNRIKRLVR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E+ RL + D+V +AKR + + + R+ R +
Sbjct: 60 ESFRLSQHNL--PSCDFVFVAKRGIGQLDNQTFLQTLDKLWARHIRLAQKSSS 110
>gi|283954519|ref|ZP_06372038.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 414]
gi|283793923|gb|EFC32673.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni 414]
Length = 108
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + L++ ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKVGKKWHCEGVIVFYLHSYEK----KIAVVASKKVGKAVIRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + + Y+ IAK + + F L + +++ +
Sbjct: 57 SKRILRALFVKFEKYLQDGK--YIFIAKNEITELSFSRLEKNLKWGLKKLE 105
>gi|319403769|emb|CBI77353.1| ribonuclease P protein component [Bartonella rochalimae ATCC
BAA-1498]
Length = 105
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F LE+ + RVGF VT+K G AV+RNR++RRL+EAVR
Sbjct: 2 AARTGEKRRGPLFLLEIKPREQTAKTKGPLTARVGFAVTRKNGNAVQRNRIKRRLREAVR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ ++ G DYV+I R+ L PF L N R++R +
Sbjct: 62 VGLVNEMEAGTDYVIIGHRNVLHAPFTSLINELSRRIKRKTQRQ 105
>gi|331007967|ref|ZP_08331020.1| Ribonuclease P protein component [gamma proteobacterium IMCC1989]
gi|330418222|gb|EGG92835.1| Ribonuclease P protein component [gamma proteobacterium IMCC1989]
Length = 120
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L F V + +L N+ R+G + KK AV RNR+
Sbjct: 5 RRSQRLLNAADFQNVFSEPPLRASHQHCLILAKPNNLGYNRLGLVIAKKNIRLAVHRNRI 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R ++E+ R G D +++A++ + + ++ R ++ S
Sbjct: 65 KRLIRESFRHLPSN--NVGIDAIVLARKGLGEVDNPGVTQIMDKQWLRIQKKALS 117
>gi|312794743|ref|YP_004027666.1| ribonuclease p protein component [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312876165|ref|ZP_07736152.1| ribonuclease P protein component [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796980|gb|EFR13322.1| ribonuclease P protein component [Caldicellulosiruptor
lactoaceticus 6A]
gi|312181883|gb|ADQ42053.1| ribonuclease P protein component [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 119
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWILENIDKI-KQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|238926595|ref|ZP_04658355.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
gi|238885541|gb|EEQ49179.1| possible ribonuclease P [Selenomonas flueggei ATCC 43531]
Length = 135
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+R F V KG G L VL + + +VGF KK GCA RNR
Sbjct: 15 LPRSKMIKRRSDFQCVYQKGHSAAGRHMILYVLRDP--RVAGKVGFAAGKKLGCAAVRNR 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+EA R + + +LI + ++ RR +N
Sbjct: 73 TKRLLREAYRGLQHEL-RSDIGILLIGRAGLADGKMQDAAEDLRRLARRAGIFAGGEQNR 131
Query: 120 SR 121
+
Sbjct: 132 GK 133
>gi|268610506|ref|ZP_06144233.1| ribonuclease P protein component [Ruminococcus flavefaciens FD-1]
Length = 122
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 10 RRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
+ F + K + + V N R+G T KK G AV RNR +R ++ A
Sbjct: 10 NKDFLTLYKKGRYAASKYSVIYV--RPNGRPFNRLGITAGKKVGNAVCRNRAKRLIRLAY 67
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
R + G D V++A+ I +E
Sbjct: 68 RQSEVDM-PVGMDIVIVARTAITTIKSQE 95
>gi|187735750|ref|YP_001877862.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
gi|187425802|gb|ACD05081.1| ribonuclease P protein component [Akkermansia muciniphila ATCC
BAA-835]
Length = 115
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+ + QFA V+ G G L + + G TKK GCAV RN++RRR++
Sbjct: 1 MTRAFQFARVRNEGPSVAGRLIVLSAAPLEHPEEPSKFGIICTKKIGCAVVRNKLRRRVR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E +R G V + + A+ + +L + + R+ K S +
Sbjct: 61 EILRAHGAPFEN-GVHLVCVLRWRAVEASYADLERDWRKAARKLKLQLLSREQ 112
>gi|206901604|ref|YP_002251656.1| ribonuclease P protein component [Dictyoglomus thermophilum H-6-12]
gi|226736861|sp|B5YBN8|RNPA_DICT6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206740707|gb|ACI19765.1| ribonuclease P protein component [Dictyoglomus thermophilum H-6-12]
Length = 120
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 2 SNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L+K+ F V + F + + R+G +V KK G AV RNR
Sbjct: 7 PKEEKLRKQEDFLRVLREGRPYSLSKSFIIYIRKGAEKR---RIGISVNKKVGKAVVRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRD--ALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++E RL + + + ++I K + F ++ + ++ +
Sbjct: 64 IKRLIREVYRLHRPYL-REDIEMLVIVKPGENIKDLDFHKVKDMLIKIWEKAGALKEQ 120
>gi|189218936|ref|YP_001939577.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
gi|189185794|gb|ACD82979.1| Ribonuclease P protein component [Methylacidiphilum infernorum V4]
Length = 145
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 8 KKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
KK+++ AL KG+ FF L L + P+V F V+KK A +RN ++RR++E
Sbjct: 37 KKKKEIALFFSKGKKFSSSFFIL-FLLSTEYQSFPKVFFAVSKKVNRACQRNLIKRRMRE 95
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + IAK AL PF+EL ++ +
Sbjct: 96 IFRQH-PFFKLSPFAFGWIAKEKALKAPFEELKTDMIKLGEKA 137
>gi|57237788|ref|YP_179036.1| ribonuclease P protein component [Campylobacter jejuni RM1221]
gi|148926119|ref|ZP_01809805.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8486]
gi|67461262|sp|Q5HUJ9|RNPA_CAMJR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|57166592|gb|AAW35371.1| ribonuclease P protein component [Campylobacter jejuni RM1221]
gi|145845598|gb|EDK22690.1| putative ribonuclease P protein component [Campylobacter jejuni
subsp. jejuni CG8486]
gi|315058401|gb|ADT72730.1| Ribonuclease P protein component [Campylobacter jejuni subsp.
jejuni S3]
Length = 108
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N +F+ V K G+ + LN+ ++ +KK G AV RNR
Sbjct: 1 MKNFDKFSTNEEFSSVYKIGKKWHCEGVIIFYLNSYEK----KIAVVASKKVGKAVVRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+ + Y+ +AK + + F L + +++ +
Sbjct: 57 SKRILRALFAKFERYLRDGK--YIFVAKNEITELSFSRLEKNLKWGLKKLE 105
>gi|312948271|gb|ADR29098.1| ribonuclease P [Escherichia coli O83:H1 str. NRG 857C]
Length = 108
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ QF V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRQARGS 108
>gi|255016878|ref|ZP_05289004.1| ribonuclease P [Listeria monocytogenes FSL F2-515]
Length = 88
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ R+G +V+KK G AV RNR++R ++++ + +Y++IA++ A +
Sbjct: 3 KQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPEN-EYIIIARKPAANM 61
Query: 94 PFKELCNHFVERVRRNKRSYYSGKN 118
F E+ + ++ + N
Sbjct: 62 DFHEVKKSLIHVLKVGRVLKQKPNN 86
>gi|29840592|ref|NP_829698.1| ribonuclease P [Chlamydophila caviae GPIC]
gi|33301608|sp|Q821V0|RNPA_CHLCV RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|29834942|gb|AAP05576.1| ribonuclease P protein component [Chlamydophila caviae GPIC]
Length = 139
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KR+QF + + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKYARVLKRKQFLYISRAGSHCQGSQVIFHVAPSRYSGCCKLGITVSKKFGKAHKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + V++ K F++L F +++
Sbjct: 66 KRIVREAFRKKRHSL--PACQIVVMPKNK-QQPKFEDLLQDFAQQI 108
>gi|312128803|ref|YP_003993677.1| ribonuclease p protein component [Caldicellulosiruptor
hydrothermalis 108]
gi|311778822|gb|ADQ08308.1| ribonuclease P protein component [Caldicellulosiruptor
hydrothermalis 108]
Length = 119
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWILENIDKI-KQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|25029502|ref|NP_739556.1| ribonuclease P [Corynebacterium efficiens YS-314]
gi|29427799|sp|Q8FSU8|RNPA_COREF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|23494791|dbj|BAC19756.1| putative ribonuclease P protein component [Corynebacterium
efficiens YS-314]
Length = 133
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 16/129 (12%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTV 47
+ L QF ++KG + + ++ S PR G V
Sbjct: 2 LPAQNKLTSSVQFRTTMRKGRRAGSSTVVVHLWDSAESLDGTGEKGEVASFGGPRFGLIV 61
Query: 48 TKKQGCAVERNRMRRRLKEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
+K G AV R+R RRL+ + +L H V+ A + ++L
Sbjct: 62 SKAVGNAVIRHRTSRRLRHVCARIAADSPELLTPTHHVVIRALAGSGQASSQDLERDIRH 121
Query: 105 RVRRNKRSY 113
+R+ R
Sbjct: 122 GLRKAGRVR 130
>gi|317484432|ref|ZP_07943346.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
gi|316924320|gb|EFV45492.1| LOW QUALITY PROTEIN: ribonuclease P [Bilophila wadsworthia 3_1_6]
Length = 103
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F L G F + V S RVG VTKK G AV RNR++R L+E RL
Sbjct: 1 DFTLCYDEGRRFFSKHFVVFVRFRA-SGDPWRVGMAVTKKIGTAVMRNRVKRVLRECFRL 59
Query: 71 CAEGVLKHGHDYVLIAKRDAL--FIPFKELCNHFVERVRRN 109
+L D V++ KR + F+ ++
Sbjct: 60 HQA-LLPPAVDLVIVPKRHLKPEQLDLAAATREFLPLIKEI 99
>gi|62185409|ref|YP_220194.1| ribonuclease P [Chlamydophila abortus S26/3]
gi|81312441|sp|Q5L548|RNPA_CHLAB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|62148476|emb|CAH64246.1| putative ribonuclease P protein component [Chlamydophila abortus
S26/3]
Length = 139
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KRRQF + + R + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRRQFLYISRAGSRCQGSQVIFHVAPSKYPGCCKLGITVSKKFGKANKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA RL + V++ K F+EL F +++
Sbjct: 66 KRIVREAFRLKRHSL--PSCQIVVMPKNK-HRPKFEELLQDFTQQI 108
>gi|152998481|ref|YP_001343316.1| ribonuclease P protein component [Marinomonas sp. MWYL1]
gi|254808072|sp|A6W3V2|RNPA_MARMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|150839405|gb|ABR73381.1| ribonuclease P protein component [Marinomonas sp. MWYL1]
Length = 132
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 5 CILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L + V F L ++ R+G V+KK AV RNR++
Sbjct: 10 VRLLNAGDYQSVFNDTSSKVFAGEFLLLARKRDDDQ--TRLGLIVSKKTDKRAVGRNRIK 67
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
R ++++ R + G D V +A+ + +L N + + + +
Sbjct: 68 RLVRDSFRHH--KIPLSGLDIVFLARHGIKELENADLHNRLDKAWDQLAKKALKPTQNKK 125
Query: 122 K 122
+
Sbjct: 126 R 126
>gi|222530705|ref|YP_002574587.1| ribonuclease P protein component [Caldicellulosiruptor bescii DSM
6725]
gi|222457552|gb|ACM61814.1| ribonuclease P protein component [Caldicellulosiruptor bescii DSM
6725]
Length = 119
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWILENMDKI-KQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|238921765|ref|YP_002935280.1| ribonuclease P protein component, [Edwardsiella ictaluri 93-146]
gi|259494106|sp|C5BF62|RNPA_EDWI9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238871334|gb|ACR71045.1| ribonuclease P protein component, putative [Edwardsiella ictaluri
93-146]
Length = 119
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L F V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPNHFNFVFQQPQRAGTPQLTI--LGRMNSLGYPRIGLTVAKKHVKRAHERNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R +E+ RL + D+V+I K+ + + L + RR+ R +
Sbjct: 65 IKRLTRESFRLRQHSL--PAMDFVVIVKKGVQELDNRALTEMLEKLWRRHCRQARAS 119
>gi|240950207|ref|ZP_04754494.1| ribonuclease P protein component [Actinobacillus minor NM305]
gi|240295294|gb|EER46080.1| ribonuclease P protein component [Actinobacillus minor NM305]
Length = 114
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 12 QFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + + P +L L N +PR+G TV K A +RNR++R ++E+ R
Sbjct: 6 QFKAVFENPQRASTPQMTL--LAKANDAEVPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRK 122
L + D+V + K + L + R+ R + +K
Sbjct: 64 LKQHEL--PCADFVFVVKAGIGKLDNATLFETLEKLWARHIRLSKNPAPPVQK 114
>gi|289523250|ref|ZP_06440104.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503793|gb|EFD24957.1| ribonuclease P protein component [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 126
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L++R +F L+ + G+ +G + + + R+G V KKQG + RNR RR L
Sbjct: 2 RLRRREEFDLLFREGKRARGAYVRMLYIKAPEG-AGTRIGVAVGKKQGKSCVRNRGRRLL 60
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
KEA R LK G+ VL L +++ + RR
Sbjct: 61 KEAARRLLP-WLKEGYWIVLQLSSAGLTKGARDIYFDMGDLWRR 103
>gi|300719143|ref|YP_003743946.1| ribonuclease P protein component [Erwinia billingiae Eb661]
gi|299064979|emb|CAX62099.1| Ribonuclease P protein component [Erwinia billingiae Eb661]
Length = 108
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVIVAKKGVADLDNRALTEALEKLWRRHCRLARGS 108
>gi|260580089|ref|ZP_05847919.1| ribonuclease P [Haemophilus influenzae RdAW]
gi|260093373|gb|EEW77306.1| ribonuclease P [Haemophilus influenzae RdAW]
Length = 128
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 16 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 74
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 75 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIRLAQKS 128
>gi|324999880|ref|ZP_08120992.1| ribonuclease P protein component [Pseudonocardia sp. P1]
Length = 128
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVERNR 59
L +R +FA K R G + L+ + PR GF V+K G AV R+R
Sbjct: 6 ARLTRRPEFASTIKRGRRAGRSRLVVHLDLTRPGGVPEHASPRAGFVVSKAVGNAVVRHR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RRL+ V + + G V+ A A EL +
Sbjct: 66 VTRRLRHLVSDRMDQL-PAGAALVVRALPPAGRATSAELGADLDSAL 111
>gi|320103591|ref|YP_004179182.1| ribonuclease P protein component [Isosphaera pallida ATCC 43644]
gi|319750873|gb|ADV62633.1| ribonuclease P protein component [Isosphaera pallida ATCC 43644]
Length = 165
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
L+ +FA V + + + N R+G +V K+ A ER R
Sbjct: 24 RKTHRLRAAAEFAAVFQHRKTCSDSILIVYGH-PNHRSEARLGLSVGKRKYRRAHERARF 82
Query: 61 RRRLKEAVRLCA-EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R ++EA RL G L G DYV++ + L F ++ R R
Sbjct: 83 KRLVREAFRLARASGELPEGIDYVVVPRGGPLPR-FDQVRASLTHLCRGVARRLS 136
>gi|110644047|ref|YP_671777.1| ribonuclease P protein component [Escherichia coli 536]
gi|110807606|ref|YP_691126.1| ribonuclease P [Shigella flexneri 5 str. 8401]
gi|227883926|ref|ZP_04001731.1| ribonuclease P protein component [Escherichia coli 83972]
gi|253775662|ref|YP_003038493.1| ribonuclease P [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|256021278|ref|ZP_05435143.1| ribonuclease P [Shigella sp. D9]
gi|256025565|ref|ZP_05439430.1| ribonuclease P [Escherichia sp. 4_1_40B]
gi|297521628|ref|ZP_06940014.1| ribonuclease P [Escherichia coli OP50]
gi|300815049|ref|ZP_07095274.1| ribonuclease P protein component [Escherichia coli MS 107-1]
gi|300824311|ref|ZP_07104427.1| ribonuclease P protein component [Escherichia coli MS 119-7]
gi|300896033|ref|ZP_07114594.1| ribonuclease P protein component [Escherichia coli MS 198-1]
gi|300903020|ref|ZP_07120962.1| ribonuclease P protein component [Escherichia coli MS 84-1]
gi|300917466|ref|ZP_07134126.1| ribonuclease P protein component [Escherichia coli MS 115-1]
gi|300925528|ref|ZP_07141403.1| ribonuclease P protein component [Escherichia coli MS 182-1]
gi|300932336|ref|ZP_07147604.1| ribonuclease P protein component [Escherichia coli MS 187-1]
gi|300940890|ref|ZP_07155417.1| ribonuclease P protein component [Escherichia coli MS 21-1]
gi|300947534|ref|ZP_07161711.1| ribonuclease P protein component [Escherichia coli MS 116-1]
gi|300956290|ref|ZP_07168592.1| ribonuclease P protein component [Escherichia coli MS 175-1]
gi|300983656|ref|ZP_07176697.1| ribonuclease P protein component [Escherichia coli MS 200-1]
gi|300984537|ref|ZP_07177027.1| ribonuclease P protein component [Escherichia coli MS 45-1]
gi|301020906|ref|ZP_07184961.1| ribonuclease P protein component [Escherichia coli MS 69-1]
gi|301028498|ref|ZP_07191738.1| ribonuclease P protein component [Escherichia coli MS 196-1]
gi|301047523|ref|ZP_07194599.1| ribonuclease P protein component [Escherichia coli MS 185-1]
gi|301305949|ref|ZP_07212031.1| ribonuclease P protein component [Escherichia coli MS 124-1]
gi|301325004|ref|ZP_07218554.1| ribonuclease P protein component [Escherichia coli MS 78-1]
gi|301644376|ref|ZP_07244377.1| ribonuclease P protein component [Escherichia coli MS 146-1]
gi|306815943|ref|ZP_07450081.1| ribonuclease P [Escherichia coli NC101]
gi|307140404|ref|ZP_07499760.1| ribonuclease P [Escherichia coli H736]
gi|307313227|ref|ZP_07592852.1| ribonuclease P protein component [Escherichia coli W]
gi|309795747|ref|ZP_07690162.1| ribonuclease P protein component [Escherichia coli MS 145-7]
gi|312967886|ref|ZP_07782098.1| ribonuclease P protein component [Escherichia coli 2362-75]
gi|312972004|ref|ZP_07786178.1| ribonuclease P protein component [Escherichia coli 1827-70]
gi|110345639|gb|ABG71876.1| ribonuclease P protein component [Escherichia coli 536]
gi|110617154|gb|ABF05821.1| ribonuclease P [Shigella flexneri 5 str. 8401]
gi|227839204|gb|EEJ49670.1| ribonuclease P protein component [Escherichia coli 83972]
gi|253326706|gb|ACT31308.1| ribonuclease P protein component [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260451438|gb|ACX41860.1| ribonuclease P protein component [Escherichia coli DH1]
gi|299878460|gb|EFI86671.1| ribonuclease P protein component [Escherichia coli MS 196-1]
gi|300300583|gb|EFJ56968.1| ribonuclease P protein component [Escherichia coli MS 185-1]
gi|300306879|gb|EFJ61399.1| ribonuclease P protein component [Escherichia coli MS 200-1]
gi|300316877|gb|EFJ66661.1| ribonuclease P protein component [Escherichia coli MS 175-1]
gi|300360093|gb|EFJ75963.1| ribonuclease P protein component [Escherichia coli MS 198-1]
gi|300398373|gb|EFJ81911.1| ribonuclease P protein component [Escherichia coli MS 69-1]
gi|300404926|gb|EFJ88464.1| ribonuclease P protein component [Escherichia coli MS 84-1]
gi|300408370|gb|EFJ91908.1| ribonuclease P protein component [Escherichia coli MS 45-1]
gi|300415270|gb|EFJ98580.1| ribonuclease P protein component [Escherichia coli MS 115-1]
gi|300418368|gb|EFK01679.1| ribonuclease P protein component [Escherichia coli MS 182-1]
gi|300452871|gb|EFK16491.1| ribonuclease P protein component [Escherichia coli MS 116-1]
gi|300454371|gb|EFK17864.1| ribonuclease P protein component [Escherichia coli MS 21-1]
gi|300459922|gb|EFK23415.1| ribonuclease P protein component [Escherichia coli MS 187-1]
gi|300523198|gb|EFK44267.1| ribonuclease P protein component [Escherichia coli MS 119-7]
gi|300531941|gb|EFK53003.1| ribonuclease P protein component [Escherichia coli MS 107-1]
gi|300838800|gb|EFK66560.1| ribonuclease P protein component [Escherichia coli MS 124-1]
gi|300848098|gb|EFK75858.1| ribonuclease P protein component [Escherichia coli MS 78-1]
gi|301077317|gb|EFK92123.1| ribonuclease P protein component [Escherichia coli MS 146-1]
gi|305850339|gb|EFM50796.1| ribonuclease P [Escherichia coli NC101]
gi|306906910|gb|EFN37419.1| ribonuclease P protein component [Escherichia coli W]
gi|307555844|gb|ADN48619.1| ribonuclease P protein component [Escherichia coli ABU 83972]
gi|307628780|gb|ADN73084.1| ribonuclease P [Escherichia coli UM146]
gi|308120626|gb|EFO57888.1| ribonuclease P protein component [Escherichia coli MS 145-7]
gi|310334381|gb|EFQ00586.1| ribonuclease P protein component [Escherichia coli 1827-70]
gi|312287447|gb|EFR15355.1| ribonuclease P protein component [Escherichia coli 2362-75]
gi|313647712|gb|EFS12160.1| ribonuclease P protein component [Shigella flexneri 2a str. 2457T]
gi|315063010|gb|ADT77337.1| protein C5 component of RNase P [Escherichia coli W]
gi|315254608|gb|EFU34576.1| ribonuclease P protein component [Escherichia coli MS 85-1]
gi|315285490|gb|EFU44935.1| ribonuclease P protein component [Escherichia coli MS 110-3]
gi|315292863|gb|EFU52215.1| ribonuclease P protein component [Escherichia coli MS 153-1]
gi|315296903|gb|EFU56191.1| ribonuclease P protein component [Escherichia coli MS 16-3]
gi|315618590|gb|EFU99176.1| ribonuclease P protein component [Escherichia coli 3431]
gi|320174822|gb|EFW49945.1| Ribonuclease P protein component [Shigella dysenteriae CDC 74-1112]
gi|320180046|gb|EFW54988.1| Ribonuclease P protein component [Shigella boydii ATCC 9905]
gi|320185531|gb|EFW60297.1| Ribonuclease P protein component [Shigella flexneri CDC 796-83]
gi|320193749|gb|EFW68382.1| Ribonuclease P protein component [Escherichia coli WV_060327]
gi|320201268|gb|EFW75849.1| Ribonuclease P protein component [Escherichia coli EC4100B]
gi|320644872|gb|EFX13908.1| ribonuclease P [Escherichia coli O157:H- str. 493-89]
gi|320650136|gb|EFX18632.1| ribonuclease P [Escherichia coli O157:H- str. H 2687]
gi|320655484|gb|EFX23419.1| ribonuclease P [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320661110|gb|EFX28546.1| ribonuclease P [Escherichia coli O55:H7 str. USDA 5905]
gi|320666236|gb|EFX33242.1| ribonuclease P [Escherichia coli O157:H7 str. LSU-61]
gi|323161044|gb|EFZ46963.1| ribonuclease P protein component [Escherichia coli E128010]
gi|323177716|gb|EFZ63300.1| ribonuclease P protein component [Escherichia coli 1180]
gi|324008041|gb|EGB77260.1| ribonuclease P protein component [Escherichia coli MS 57-2]
gi|324012734|gb|EGB81953.1| ribonuclease P protein component [Escherichia coli MS 60-1]
gi|324018427|gb|EGB87646.1| ribonuclease P protein component [Escherichia coli MS 117-3]
gi|327250847|gb|EGE62549.1| ribonuclease P protein component [Escherichia coli STEC_7v]
gi|330908021|gb|EGH36540.1| ribonuclease P protein component [Escherichia coli AA86]
gi|332084894|gb|EGI90077.1| ribonuclease P protein component [Shigella boydii 5216-82]
gi|332089515|gb|EGI94619.1| ribonuclease P protein component [Shigella boydii 3594-74]
gi|332345695|gb|AEE59029.1| ribonuclease P protein RnpA [Escherichia coli UMNK88]
gi|332750525|gb|EGJ80934.1| ribonuclease P protein component [Shigella flexneri K-671]
gi|332750696|gb|EGJ81104.1| ribonuclease P protein component [Shigella flexneri 4343-70]
gi|332751775|gb|EGJ82173.1| ribonuclease P protein component [Shigella flexneri 2747-71]
gi|332997071|gb|EGK16687.1| ribonuclease P protein component [Shigella flexneri K-218]
gi|332997870|gb|EGK17478.1| ribonuclease P protein component [Shigella flexneri K-272]
gi|333013262|gb|EGK32635.1| ribonuclease P protein component [Shigella flexneri K-304]
gi|333013665|gb|EGK33030.1| ribonuclease P protein component [Shigella flexneri K-227]
Length = 108
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ QF V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 108
>gi|297627572|ref|YP_003689335.1| ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296923337|emb|CBL57938.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 142
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 46/136 (33%), Gaps = 14/136 (10%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEV-------LNNNNSNLLPRVGFTVTKKQG 52
+ L+ +F V+ G P + N +VGF V+KK G
Sbjct: 2 LPTAARLRNSAEFRSIVRHGVRVGRPTLVVHADLAEHAPRGNTPGPTSTKVGFVVSKKVG 61
Query: 53 CAVERNRMRRRLKEAVRLCA-----EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV RNR++RRL+ R + L V+ A A P K L F
Sbjct: 62 NAVTRNRVKRRLRHMARARVVASTADVPLPGALRVVVRALPAAATEP-KRLAGDFDSAWD 120
Query: 108 RNKRSYYSGKNFSRKS 123
R + + S
Sbjct: 121 RALARLTPAPSAAGTS 136
>gi|319957041|ref|YP_004168304.1| ribonuclease p protein component [Nitratifractor salsuginis DSM
16511]
gi|319419445|gb|ADV46555.1| ribonuclease P protein component [Nitratifractor salsuginis DSM
16511]
Length = 121
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 1 MSNICILKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
++ + ++R F V + ++ P+F L V F KK G AV RN
Sbjct: 4 LNRFQRITQQRDFDRVYRRADKVWHTPWFVLFYQK----GSRYSVAFVAGKKVGKAVARN 59
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R +RRL+ + Y+L+AK L + + EL + + + R+ S +
Sbjct: 60 RAKRRLRALFQERIAEYRPGS--YILVAKAAILDVEYAELQQAWSKALERSGAIQPSARR 117
Query: 119 FSR 121
R
Sbjct: 118 AVR 120
>gi|317050196|ref|YP_004117844.1| ribonuclease P protein component [Pantoea sp. At-9b]
gi|316951813|gb|ADU71288.1| ribonuclease P protein component [Pantoea sp. At-9b]
Length = 108
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPTHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKHVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALAEALEKLWRRHCRLARGS 108
>gi|332288921|ref|YP_004419773.1| ribonuclease P [Gallibacterium anatis UMN179]
gi|330431817|gb|AEC16876.1| ribonuclease P [Gallibacterium anatis UMN179]
Length = 111
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ QF V + R + ++ N+ PR+G TV K A +RNR++R +
Sbjct: 1 MLTPSQFNFVFQQPFRAS-LPEISIIARPNTLQHPRLGLTVAKKYVKRANQRNRIKRICR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
E+ RL L +D+++IA++ I L + +R+ R +
Sbjct: 60 ESFRLQQH--LLPDYDFIIIARKGIGDIDNALLFKMLDKLWQRHLRFSKKSSS 110
>gi|40062652|gb|AAR37573.1| ribonuclease P protein component [uncultured marine bacterium 313]
Length = 121
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAV 55
M L + +QF + K + +FS+ N N + + F + K G AV
Sbjct: 1 MIKFKSLNRSKQFIRILKKKRLNAKYFSIYFEKNLSNVKKNDKKILNISFVIKKNVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLK--HGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RN+++R+LK AV+ + + YV+ + F+ + + + +R K+
Sbjct: 61 IRNKIKRKLKSAVQKVLKEKQPIDLNYTYVIFGRNSVYKDKFQLIFDEVNDMFKRIKQ 118
>gi|1075286|pir||F64107 ribonuclease P (EC 3.1.26.5) protein component - Haemophilus
influenzae (strain Rd KW20)
Length = 136
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 24 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 83 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIRLAQKS 136
>gi|149911781|ref|ZP_01900385.1| ribonuclease P [Moritella sp. PE36]
gi|149805127|gb|EDM65149.1| ribonuclease P [Moritella sp. PE36]
Length = 93
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHG 79
P ++ L NNS PR+G V KK AV RNR++R ++E+ R
Sbjct: 2 RSASPHITI--LAKNNSLGHPRLGLAVPKKAIKLAVGRNRVKRLIRESFRTRQHDF--PN 57
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
D V+IAK + E+ + R+ R
Sbjct: 58 VDIVVIAKSGIANLENAEIDALLEKLWRKLCRR 90
>gi|21245085|ref|NP_644667.1| ribonuclease P [Xanthomonas axonopodis pv. citri str. 306]
gi|24638174|sp|Q8PEH6|RNPA_XANAC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21110819|gb|AAM39203.1| ribonuclease P, protein component [Xanthomonas axonopodis pv. citri
str. 306]
Length = 145
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDP--LLSLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L++A+R + G DYV++A+ A ++ + F+ + R
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFLRLLHR 114
>gi|161616959|ref|YP_001590924.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|213424950|ref|ZP_03357700.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213622274|ref|ZP_03375057.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|224585639|ref|YP_002639438.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238913092|ref|ZP_04656929.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289826406|ref|ZP_06545518.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|161366323|gb|ABX70091.1| hypothetical protein SPAB_04780 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|224470167|gb|ACN47997.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|321225559|gb|EFX50614.1| Ribonuclease P protein component [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322634392|gb|EFY31126.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322661662|gb|EFY57881.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322683662|gb|EFY79675.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322716819|gb|EFZ08390.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323204955|gb|EFZ89940.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323218632|gb|EGA03339.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323241399|gb|EGA25431.1| ribonuclease P [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|326625576|gb|EGE31921.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 108
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 108
>gi|262040468|ref|ZP_06013711.1| ribonuclease P protein component [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042221|gb|EEW43249.1| ribonuclease P protein component [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 108
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPSHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVKRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AKR + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PPMDFVVVAKRGVADLDNRALSEALEKLWRRHCRLARGS 108
>gi|213693344|ref|YP_002323930.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|254808048|sp|B7GPF7|RNPA_BIFLI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|213524805|gb|ACJ53552.1| ribonuclease P protein component [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459525|dbj|BAJ70146.1| ribonuclease P [Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 119
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQGCAVE 56
+ L+ R F V K + G + + + R+G V+K G AV
Sbjct: 1 MERLQSHRDFVTVLKRRRKAGGKDIVVHYLVPDDHHDDDDRTVHRRLGLAVSKSVGHAVT 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR + R +L D VL AK A F L +
Sbjct: 61 RNTVKRRFRVLARAHE-DLLPAHCDIVLRAKPSAATASFVSLDQQIAKAFATVAHK 115
>gi|299132592|ref|ZP_07025787.1| ribonuclease P protein component [Afipia sp. 1NLS2]
gi|298592729|gb|EFI52929.1| ribonuclease P protein component [Afipia sp. 1NLS2]
Length = 125
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LKKR F +G P F ++ +++ R+GFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLKKRADFIAAAQGPRIARPAFVVQSRLRDDT-GPTRIGFTVTKKVGTATERNRVRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR-SYYSGKNFS 120
E VRL D+V++ +R AL F + F + R R +G
Sbjct: 62 EMVRLAGVIAPPSPRDHVIVGRRAALDHEFSVMIEDFRSALMRLTRMKDRAGDPRP 117
>gi|227487664|ref|ZP_03917980.1| ribonuclease P [Corynebacterium glucuronolyticum ATCC 51867]
gi|227092358|gb|EEI27670.1| ribonuclease P [Corynebacterium glucuronolyticum ATCC 51867]
Length = 102
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNS---NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL-CA 72
K G + ++ + PR G V+K G AV R+ RRL+ A
Sbjct: 2 KNGVRAGTRVLVVHAVDCSTDVERQGGPRFGLVVSKAVGNAVVRHHTSRRLRHLAMDAIA 61
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ DYVL A +EL +HF +R+
Sbjct: 62 RETARPQCDYVLRALPGIDEATAEELSHHFSAALRKAHGKL 102
>gi|165977384|ref|YP_001652977.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877485|gb|ABY70533.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 110
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + P ++ L +N+ +PR+G TV K A +RNR++R ++E+ R
Sbjct: 6 QFKAVFEQPLRASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + D+V +AK + L + R+ R +
Sbjct: 64 LKQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLAKKPQA 110
>gi|159042888|ref|YP_001531682.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
gi|157910648|gb|ABV92081.1| ribonuclease P protein component [Dinoroseobacter shibae DFL 12]
Length = 129
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 27 FSLEVLNNNNSNL--LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
F L+ RVGFT +KK G AV RNR +RRL+E RL + G DYVL
Sbjct: 37 FLLQARRRAPDEPATGIRVGFTCSKKVGNAVARNRAKRRLREIARLELPTNGRDGWDYVL 96
Query: 85 IAKRDA-LFIPF 95
I ++ A F
Sbjct: 97 IGRKAATAERDF 108
>gi|39938734|ref|NP_950500.1| ribonuclease P [Onion yellows phytoplasma OY-M]
gi|60390478|sp|Q6YQX5|RNPA_ONYPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|39721843|dbj|BAD04333.1| ribonuclease P [Onion yellows phytoplasma OY-M]
Length = 141
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V K + R G + + + +V KK G A ERN +
Sbjct: 27 MKRKYILKKESEITPVFKSKKRYGNSLFIIYYVKQTAFPHFKFALSVGKKYGKAHERNLI 86
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+RRL+ +R + L +V++ K A + F++L F++ + +
Sbjct: 87 KRRLRAIIRSVSP-CLNPKMFFVIVIKAQAKNLTFQQLKTFFLQFATKTR 135
>gi|307547062|ref|YP_003899541.1| ribonuclease P [Halomonas elongata DSM 2581]
gi|307219086|emb|CBV44356.1| ribonuclease P [Halomonas elongata DSM 2581]
Length = 132
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L + V K L L + N PR+G +KK AV+RNR+
Sbjct: 7 PRRLRLLTAEDYRRVFDTAAFKLHGKGLMALASPNELGHPRLGLIFSKKNVRRAVDRNRL 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R +E++RL + D VL+A+R + + + RR +R
Sbjct: 67 KRITRESIRLRQHRL--PAVDIVLLARRGVQELDNEVVHRQLHGMWRRLEREAQKTSGRP 124
>gi|313848328|emb|CBY17331.1| putative ribonuclease P protein component [Chlamydophila psittaci
RD1]
gi|328915012|gb|AEB55845.1| Ribonuclease P protein component [Chlamydophila psittaci 6BC]
Length = 139
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KRRQF + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRRQFLYISRAGSHCQGSQVIFHVAPSKYPGCCKLGITVSKKFGKANKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA RL + V++ K F+EL F +++
Sbjct: 66 KRIVREAFRLKRHSL--PSCQIVVMPKNK-HRPKFEELLQDFAQQI 108
>gi|258655510|ref|YP_003204666.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
gi|258558735|gb|ACV81677.1| ribonuclease P protein component [Nakamurella multipartita DSM
44233]
Length = 130
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVL--NNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L QFA V ++G P + +L + PRVGF V+ K G AV R+R+ R
Sbjct: 7 RLHTSEQFAAVVRRGSRSAAPRLVVHLLTEHRPGPPADPRVGFVVSGKVGNAVVRHRITR 66
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
RL+ VR + G D V+ A A EL
Sbjct: 67 RLRALVRPRLAEL-PPGTDVVVRALPAAAAASSAELGVDLAS 107
>gi|309778006|ref|ZP_07672948.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
3_1_53]
gi|308914295|gb|EFP60093.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
3_1_53]
Length = 113
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++FA + + P F++ V + RVG +V KK G AV RN+
Sbjct: 1 MKKEYRVKKSQEFAEIMNYKKFYTCPSFAIYVKPRKEDHA--RVGISVGKKMGKAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R+++ V+ D +++ + + N + + +++ K
Sbjct: 59 IKRQVRMMVQDIYT--FNENFDTIILVRVKYHEENYINNKNSWKDWLKKLKYKGRQ 112
>gi|118475116|ref|YP_891742.1| ribonuclease P protein component [Campylobacter fetus subsp. fetus
82-40]
gi|118414342|gb|ABK82762.1| ribonuclease P protein component [Campylobacter fetus subsp. fetus
82-40]
Length = 110
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 3 NICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
+ ++F V +G + + L ++ + +KK G AV RNR++
Sbjct: 5 RFSSISDSKEFIRVYQGAKKWHFECAVIYFLESDT----TKFAAVASKKVGKAVVRNRIK 60
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R L+ A LK G Y+LIAK +PF ++ + +++
Sbjct: 61 RVLRSAF-FNFSSELKDGI-YILIAKAGLEKMPFDKVEKNLKWALKKV 106
>gi|213421848|ref|ZP_03354914.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 103
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ F V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPAHFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCR 103
>gi|21326647|gb|AAL30087.1| ribonuclease P [Xanthomonas campestris pv. campestris]
Length = 148
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R + + R+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTVVFDTARRTSDPLLSLHWRSGET--PARLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRRA 115
>gi|85712626|ref|ZP_01043673.1| RNase P protein component [Idiomarina baltica OS145]
gi|85693617|gb|EAQ31568.1| RNase P protein component [Idiomarina baltica OS145]
Length = 88
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L N PR+G T++KK+ AV RNR +R+++E RL + D V+IAK
Sbjct: 2 LACPNQLGHPRIGVTISKKRAKTAVARNRFKRQVRETFRLKQHNI--PAFDIVVIAKHGI 59
Query: 91 LFIPFKELCNHFVERVRRNKRSYYS 115
+ ++ + R+ +
Sbjct: 60 DTLDNAQMADTLNYLWRKLAKRCKQ 84
>gi|195936326|ref|ZP_03081708.1| ribonuclease P [Escherichia coli O157:H7 str. EC4024]
gi|261225857|ref|ZP_05940138.1| protein C5 component of RNase P [Escherichia coli O157:H7 str.
FRIK2000]
gi|320191196|gb|EFW65846.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
EC1212]
gi|320639429|gb|EFX09044.1| ribonuclease P [Escherichia coli O157:H7 str. G5101]
gi|326337247|gb|EGD61082.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
1044]
gi|326341618|gb|EGD65407.1| Ribonuclease P protein component [Escherichia coli O157:H7 str.
1125]
Length = 108
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ QF V + + P ++ L NS PR+G TV K A ERNR++R
Sbjct: 1 MLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVANLDNRALSEALEKLWRRHCRLARGS 108
>gi|170022260|ref|YP_001727214.1| ribonuclease P protein component [Escherichia coli ATCC 8739]
gi|169757188|gb|ACA79887.1| ribonuclease P protein component [Escherichia coli ATCC 8739]
Length = 108
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 7 LKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRL 64
+ QF V + + P ++ L NS PR+G T+ K A ERNR++R
Sbjct: 1 MLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTIAKKNVRRAHERNRIKRLT 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 59 RESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 108
>gi|304437934|ref|ZP_07397880.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369074|gb|EFM22753.1| ribonuclease P protein component [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 130
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+R F V KG G L VL + + +VGF KK GCA R+R
Sbjct: 8 LPRSRMIKRRSDFQCVYQKGRSVAGRSMILYVLRDP--RVAGKVGFAAGKKLGCAAVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R L+EA R + + +LI + ++ +RR
Sbjct: 66 TKRLLREAYRCLQHEL-RGDVGILLIGRAGLADGKMQDAAEDLRRLIRRAGIFADGASEK 124
Query: 120 SRK 122
R+
Sbjct: 125 HRR 127
>gi|300934351|ref|ZP_07149607.1| ribonuclease P protein component [Corynebacterium resistens DSM
45100]
Length = 146
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 35/140 (25%)
Query: 5 CILKKRRQF-ALVKKGELRKGPFFSLEVLNNNN--------------------------- 36
L+ F V+ G + +L+
Sbjct: 6 YRLRSSALFGRTVRNGRKKGSRTVVAYILHGPTGRVRNELLSSDGSVSRETSAFLKSSSQ 65
Query: 37 ----SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL---KHGHDYVLIAKRD 89
S+ PRVG V+K G AV R+ + RRL+ A + G VL A
Sbjct: 66 LPLSSDPHPRVGLVVSKAVGNAVSRHAVSRRLRHATGALLAEIEESCPPGTTIVLRALPR 125
Query: 90 ALFIPFKELCNHFVERVRRN 109
A ++E+ ++R
Sbjct: 126 AATATYEEILKDVHSCIKRA 145
>gi|294155970|ref|YP_003560354.1| ribonuclease P, protein component [Mycoplasma crocodyli MP145]
gi|291599899|gb|ADE19395.1| ribonuclease P, protein component [Mycoplasma crocodyli MP145]
Length = 112
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K +F L++K + + + +VG T+ KK AV RN
Sbjct: 1 MKKQYRLQKNWEFNDLIQKNKQFSNNYLVSYF----ERSESLKVGITIPKKFANAVWRNY 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R+L+ + + + +V I ++D L + + + + K
Sbjct: 57 YKRQLRAILHEL--NIYEFKFHFVFIIRKDFLKAEYAIKKQSIQKMLEKFKNESKK 110
>gi|71280614|ref|YP_271690.1| ribonuclease P protein component [Colwellia psychrerythraea 34H]
gi|71146354|gb|AAZ26827.1| ribonuclease P protein component [Colwellia psychrerythraea 34H]
Length = 128
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNN--------NSNLLPRVGFTVTKKQGC-AV 55
L F V F+L V NS R+G + KK+ AV
Sbjct: 11 RLLTPGHFQAVFSKPIRFGSRHFTLLVTPKPHTFVSDKHNSVAKNRLGLAIAKKRVKLAV 70
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+RNR++R+++E+ RL + + D V++ K + K + + R+ +
Sbjct: 71 QRNRVKRQVRESFRLNQDNL--PAIDIVVMVKSGIDQLDNKTINQELEKIWRKIIQR 125
>gi|312623588|ref|YP_004025201.1| ribonuclease p protein component [Caldicellulosiruptor
kronotskyensis 2002]
gi|312204055|gb|ADQ47382.1| ribonuclease P protein component [Caldicellulosiruptor
kronotskyensis 2002]
Length = 119
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +K+G + L N S + R G +++ K G A RNR
Sbjct: 1 MNKFYSLKKNDEFEACIKRGRFAVQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA++ A I K+ + + +R +
Sbjct: 59 FKRIVRAWILENMDKI-KQGFDIVVIARKIKDDKIKAREIHLKDFKDDLEKAFKRLR 114
>gi|197333937|ref|YP_002154776.1| ribonuclease P protein component [Vibrio fischeri MJ11]
gi|197315427|gb|ACH64874.1| ribonuclease P protein component [Vibrio fischeri MJ11]
Length = 107
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
+ + V K P F++ L NS PR+G V KKQ RN+ +R +
Sbjct: 1 MLTPEDYKFVFKQAHRAGSPHFTI--LARENSLSHPRLGLAVPKKQIKTAVGRNKFKRIV 58
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + ++ + R R
Sbjct: 59 RESFRNKQHSL--PAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSR 106
>gi|303251715|ref|ZP_07337886.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649145|gb|EFL79330.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 109
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + P ++ L +N+ +PR+G TV K A +RNR++R ++E+ R
Sbjct: 6 QFKAVFEQPLRASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + D+V +AK + L + R+ R
Sbjct: 64 LKQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLTKKP 108
>gi|302531356|ref|ZP_07283698.1| ribonuclease P protein component [Streptomyces sp. AA4]
gi|302440251|gb|EFL12067.1| ribonuclease P protein component [Streptomyces sp. AA4]
Length = 110
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R GF V+K G +V R+R+ RRL+ V + G V+ A A EL
Sbjct: 14 RAGFVVSKAVGNSVVRHRVTRRLRHLVSARLGTL-PAGSSLVVRALPPAATASSAELGAD 72
Query: 102 FVERVRRN 109
+RR
Sbjct: 73 LDAALRRL 80
>gi|225352377|ref|ZP_03743400.1| hypothetical protein BIFPSEUDO_03994 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156884|gb|EEG70253.1| hypothetical protein BIFPSEUDO_03994 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 120
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 9/117 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGP-FFSLEVLNNNNSN-------LLPRVGFTVTKKQGCAV 55
+ LK R F V K R + L ++++ RVG V+K G AV
Sbjct: 1 MERLKSHRDFVAVLKRRRRVSREDIVVHYLVHDDAIIDDSAAMRGRRVGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
RN ++RR + R + D VL AK A F L R
Sbjct: 61 TRNAVKRRFRVLARKYESAL-PESCDIVLRAKPSAAHADFLSLEQQIAACFEAVNRK 116
>gi|317178152|dbj|BAJ55941.1| ribonuclease P, protein component [Helicobacter pylori F16]
Length = 161
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSGKNFSRK 122
+ K +K
Sbjct: 136 LTSIKNYMNKALKNLKK 152
>gi|220936475|ref|YP_002515374.1| ribonuclease P protein component [Thioalkalivibrio sp. HL-EbGR7]
gi|254808096|sp|B8GRD3|RNPA_THISH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219997785|gb|ACL74387.1| ribonuclease P protein component [Thioalkalivibrio sp. HL-EbGR7]
Length = 120
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L + Q+ V F+L V +N R+G ++KK AV+R R
Sbjct: 8 PRSVRLTRPEQYKQVFGDARKLSDAGFTLLV--RDNDGDSARLGLAISKKCARRAVDRQR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R ++E R + + D V++ + + R +
Sbjct: 66 IKRLVRETFRQHRQHLAP--VDVVVMCRPAVTGWDNARIRASLERFWARLSTPCANP 120
>gi|294665121|ref|ZP_06730424.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292605122|gb|EFF48470.1| ribonuclease P [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 146
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R Q+ +V R L+ + PR+G V++K AV RNR+
Sbjct: 11 PRSARVRTRAQYTIVFDTARRTSDPLL--SLHWRTGDTPPRLGMAVSRKVDTRAVGRNRI 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L++A+R + G DYV++A+ A ++ + FV +RR
Sbjct: 69 KRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRLLRR 114
>gi|281412768|ref|YP_003346847.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
gi|281373871|gb|ADA67433.1| ribonuclease P protein component [Thermotoga naphthophila RKU-10]
Length = 117
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+GE + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGESLQNEYFVVLFRKN--GLDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
G D V+I ++ + F + + ++R +
Sbjct: 79 PKGFDIVVIPRKKLSEEFEQVDFWAVHEKLLNLLKRIE 116
>gi|54299009|ref|YP_125378.1| hypothetical protein lpp3076 [Legionella pneumophila str. Paris]
gi|148361344|ref|YP_001252551.1| ribonuclease P protein component [Legionella pneumophila str.
Corby]
gi|296108686|ref|YP_003620387.1| ribonuclease P protein component [Legionella pneumophila 2300/99
Alcoy]
gi|67461338|sp|Q5X0M0|RNPA_LEGPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226722|sp|A5IIK5|RNPA_LEGPC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53752794|emb|CAH14229.1| hypothetical protein lpp3076 [Legionella pneumophila str. Paris]
gi|148283117|gb|ABQ57205.1| ribonuclease P protein component [Legionella pneumophila str.
Corby]
gi|295650588|gb|ADG26435.1| ribonuclease P protein component [Legionella pneumophila 2300/99
Alcoy]
Length = 114
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
L K+ F V + F L N R+G ++KK A +RNR
Sbjct: 5 KKAQRLLKKNDFDFVFESAKKITTDDFI--FLFRENKLGYARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L+E+ R D +++A+ + + +
Sbjct: 63 IKRLLRESFRHT----NLPAVDIIILARPGLAKKTNLGINTKLNKTWEKL 108
>gi|326383907|ref|ZP_08205591.1| ribonuclease P [Gordonia neofelifaecis NRRL B-59395]
gi|326197366|gb|EGD54556.1| ribonuclease P [Gordonia neofelifaecis NRRL B-59395]
Length = 140
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 2 SNICILKKRRQFAL-VKKGELRKGPFFSLEV-------------LNNNNSNLLPRVGFTV 47
++ + ++ F + KG ++ V + +N P +G +
Sbjct: 3 ADSARISRKSDFTRTLSKGVRVSARDLTVHVAPLGADWPDESALRPDVATNGGPWLGLII 62
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+KK G AV R+R RRL+ A A L VL A + +L +
Sbjct: 63 SKKVGNAVIRHRTARRLRHAFAEAATTGLPPETFVVLRAHPGIVDRTSTDLADVLRTAF 121
>gi|332976006|gb|EGK12877.1| ribonuclease P protein component [Psychrobacter sp. 1501(2011)]
Length = 132
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 5/116 (4%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L K +F V P F ++ + + T K+ AV RN
Sbjct: 7 PKAKRLLKPAEFKPVFNQPLFKIHQPHFMAFAYDSESEQARLGMAIT-KKRIPTAVARNT 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++R ++E R + D V I K+ + ++ E + +
Sbjct: 66 IKRIIREQFRHKHPEL--PALDLVFILKQSTKDLSNDQMRQQVNEILAKVIAKQRR 119
>gi|285019934|ref|YP_003377645.1| ribonuclease p protein [Xanthomonas albilineans GPE PC73]
gi|283475152|emb|CBA17651.1| probable ribonuclease p protein [Xanthomonas albilineans]
Length = 145
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 10 RRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAV 68
++ +V R L L+ + PR+G V++K AV RNR++R L+EA
Sbjct: 19 SAEYRVVFDTARRCSEP--LMSLHWRSVAHPPRLGLAVSRKVDKRAVVRNRIKRVLREAT 76
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + DYV++A+ A ++L ++ +RR
Sbjct: 77 RQLLPWLAPG--DYVVVARSAAAQASGQQLRQAYLRLLRRA 115
>gi|319651098|ref|ZP_08005232.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
gi|317397268|gb|EFV77972.1| ribonuclease P [Bacillus sp. 2_A_57_CT2]
Length = 90
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
R+G +V+KK G AV RN+++R +++A E + K +D ++IA++ +
Sbjct: 2 RKEEQNHFRIGLSVSKKIGNAVMRNQIKRYIRQAFLELEEEI-KPQYDLIVIARKPVAEM 60
Query: 94 PFKELCNHFVERVRRNKRSYYSGKNFSR 121
F E+ + ++ ++ ++
Sbjct: 61 DFHEVKKSLIHVLKVSRVLNKPRLGNTK 88
>gi|224283950|ref|ZP_03647272.1| ribonuclease P protein component [Bifidobacterium bifidum NCIMB
41171]
gi|313141102|ref|ZP_07803295.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
gi|313133612|gb|EFR51229.1| ribonuclease P protein [Bifidobacterium bifidum NCIMB 41171]
Length = 123
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQGCAV 55
+ LK R F V K + + ++ R+G V+K G AV
Sbjct: 1 MKRLKSHRDFIAVLKRRFKVTDSDIVVHFVVHDDTRDVQASADIMRRMGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RR + R E +L D V+ AK A + F +L F +
Sbjct: 61 TRNRVKRRFRVLAR-RYEDMLPMQCDIVVRAKPSASRVDFADLDRQFSRCFAKV 113
>gi|190151296|ref|YP_001969821.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189916427|gb|ACE62679.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 110
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + P ++ L +N+ +PR+G TV K A +RNR++R ++E+ R
Sbjct: 6 QFKAVFEQPLRASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + D+V +AK + L + R+ R +
Sbjct: 64 LKQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKVWARHIRLAKKPQA 110
>gi|320095105|ref|ZP_08026814.1| ribonuclease P protein component [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977972|gb|EFW09606.1| ribonuclease P protein component [Actinomyces sp. oral taxon 178
str. F0338]
Length = 120
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 2/120 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ + F + R G + + VGF V K++ A RNR
Sbjct: 2 LPRAHRMVDPADFRSTIRTGSRGGDPLVVVHARTDEGEENRLVGFVVPKREIKRANGRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R+L+ +R + G V+ A AL +EL + R R + G
Sbjct: 62 VKRQLRHIMRERVGSL-PPGARVVVRASGRALGASSQELARRLDGALARAWRKWSGGGER 120
>gi|260581923|ref|ZP_05849719.1| ribonuclease P [Haemophilus influenzae NT127]
gi|260095116|gb|EEW79008.1| ribonuclease P [Haemophilus influenzae NT127]
Length = 119
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 7 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 66 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNSTFAQILEKLWQRHIRLAQKS 119
>gi|303250322|ref|ZP_07336521.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650792|gb|EFL80949.1| ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 109
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 12 QFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVR 69
QF V + P ++ L +N+ +PR+G TV K A +RNR++R ++E+ R
Sbjct: 6 QFKAVFEQPLRASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFR 63
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
L + D+V +AK + L + R+ R
Sbjct: 64 LKQHEL--PSADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLAKKP 108
>gi|212704365|ref|ZP_03312493.1| hypothetical protein DESPIG_02420 [Desulfovibrio piger ATCC
29098]
gi|212672224|gb|EEB32707.1| hypothetical protein DESPIG_02420 [Desulfovibrio piger ATCC
29098]
Length = 131
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ ++K+ +++ +G F + V N R+G V++K G AV RNR
Sbjct: 7 LPRQSRIRKQAEYSACYERGRRYHTEHFLVFVRPRENG-ACTRMGMAVSRKVGKAVTRNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++R L+E RL +L D V +AK+
Sbjct: 66 VKRLLREFFRLH-RALLPEHLDIVAVAKKHTGAAD 99
>gi|103491962|gb|ABF71982.1| ribonuclease P protein component [Persephonella marina]
Length = 117
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
+ LK R +++ KG F + NN PR F +++K AV RNR +R
Sbjct: 1 MITLKDREIKSILSKGRSLHTENFIVIY--RNNDLGYPRFAFILSRKFSKKAVVRNRAKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+KEA+R + +D + IAK++ + ++L + +
Sbjct: 59 IIKEALRAYYGSLKNLSYDIIFIAKKNIIGKKTQDLYRDMEKLI 102
>gi|94501618|ref|ZP_01308135.1| ribonuclease P [Oceanobacter sp. RED65]
gi|94426301|gb|EAT11292.1| ribonuclease P [Oceanobacter sp. RED65]
Length = 127
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L + V G K + +L N R+G V KK AV+RN++
Sbjct: 7 PRQVRLLTAGDYRRVFDGADAKAQTKQILILARRNDLGFARLGLIVAKKHAKRAVDRNQI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E+ R + D V++++ A + +L + + R R+ + + S
Sbjct: 67 KRIVRESFRHHQTEL--ENFDCVVLSRAGAKDLDKDQLRHMVDQLWTRL-RTSHGHRPRS 123
Query: 121 RKS 123
+KS
Sbjct: 124 KKS 126
>gi|188581561|ref|YP_001925006.1| ribonuclease P protein component [Methylobacterium populi BJ001]
gi|179345059|gb|ACB80471.1| ribonuclease P protein component [Methylobacterium populi BJ001]
Length = 169
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-------LLPRVGFTVTKKQGC 53
MS I L++R F +G S + + +GFT+TK+ G
Sbjct: 1 MSTIGRLRRRPDFLAAAQGRRFHTERMSAQGRLRDPGETRDGGPAEGVFLGFTITKRVGH 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A ERNR+RRRL+ AV A D V+IA+R AL PF+ L + R
Sbjct: 61 ATERNRIRRRLRSAVAAVAAEAPSIEADVVVIARRPALDAPFESLVADLRRALHTVTRPA 120
Query: 114 YSGKNFSRK 122
+ +
Sbjct: 121 PPRSGDASR 129
>gi|15828624|ref|NP_325984.1| ribonuclease P protein component (protein C5) (RNase P) [Mycoplasma
pulmonis UAB CTIP]
gi|21542223|sp|Q98R57|RNPA_MYCPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|14089566|emb|CAC13326.1| RIBONUCLEASE P PROTEIN COMPONENT (PROTEIN C5) (RNASE P) [Mycoplasma
pulmonis]
Length = 111
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M I ++K +F + + + + NN+ ++G ++ KK AV+RN
Sbjct: 1 MKKIYHIRKNWEFQAIINSKRQVISKNLIFYYQRNNT---FKIGVSIPKKFAGAVKRNFY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R++ +R + + V+I +++ + + F E + + R K
Sbjct: 58 KRQIMAILRDIQ-DLTNLEYKIVMIVRKNFMALDFLEKKKEIQKMLERFKNEKRK 111
>gi|115522670|ref|YP_779581.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
gi|115516617|gb|ABJ04601.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisA53]
Length = 113
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F V G P F L+ ++ + RVGFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFIAVANGARANRPAFVLQARGRDD-DGPVRVGFTVTKKIGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
E V+ V++ DYVL+ +RDAL F + + R R S K
Sbjct: 62 ELVKRVDGAVIRPHSDYVLVGRRDALSRGFSVMLDDLHSAFDRVARRSPSAK 113
>gi|85057753|ref|YP_456669.1| ribonuclease P [Aster yellows witches'-broom phytoplasma AYWB]
gi|84789858|gb|ABC65590.1| ribonuclease P [Aster yellows witches'-broom phytoplasma AYWB]
Length = 128
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK + V K + R G F + + + +V KK G A ERN +
Sbjct: 14 MKRKYILKKENEITPVFKSKKRYGNSFFIIYYVKQTTFPHFKFALSVGKKYGKAHERNLI 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+RRL+ + + L +V++ K A + FK+L
Sbjct: 74 KRRLRAIISSFSP-CLNPKMCFVIVIKAPAKTLTFKQLK 111
>gi|94312546|ref|YP_585756.1| ribonuclease P protein component [Cupriavidus metallidurans CH34]
gi|93356398|gb|ABF10487.1| Ribonuclease P protein component (modular protein) [Cupriavidus
metallidurans CH34]
Length = 385
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N + R+G V KK A ERN
Sbjct: 244 PKAARLTKTDEFSSVFALRPRRRTTHFVLYVRANGQAQA--RLGIVVGKKFAPRAAERNL 301
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
++R ++E R G D +L + F
Sbjct: 302 VKRMVRELFRSRQAQFA--GRDILLRLQAKFPRAEFS 336
>gi|16272935|ref|NP_439161.1| ribonuclease P [Haemophilus influenzae Rd KW20]
gi|145628058|ref|ZP_01783859.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145634174|ref|ZP_01789885.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145637304|ref|ZP_01792965.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145638180|ref|ZP_01793790.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145640674|ref|ZP_01796257.1| ribonuclease P [Haemophilus influenzae R3021]
gi|229843942|ref|ZP_04464083.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|2507338|sp|P44306|RNPA_HAEIN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1574030|gb|AAC22661.1| ribonuclease P (rnpA) [Haemophilus influenzae Rd KW20]
gi|144979833|gb|EDJ89492.1| ribonuclease P [Haemophilus influenzae 22.1-21]
gi|145268618|gb|EDK08611.1| ribonuclease P [Haemophilus influenzae PittAA]
gi|145269556|gb|EDK09498.1| ribonuclease P [Haemophilus influenzae PittHH]
gi|145272509|gb|EDK12416.1| ribonuclease P [Haemophilus influenzae PittII]
gi|145274600|gb|EDK14463.1| ribonuclease P [Haemophilus influenzae 22.4-21]
gi|229812936|gb|EEP48624.1| ribonuclease P [Haemophilus influenzae 6P18H1]
gi|309751336|gb|ADO81320.1| Ribonuclease P, protein component [Haemophilus influenzae R2866]
gi|309973502|gb|ADO96703.1| Ribonuclease P, protein component [Haemophilus influenzae R2846]
Length = 119
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 7 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 66 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNNTFAQILEKLWQRHIRLAQKS 119
>gi|187251670|ref|YP_001876152.1| ribonuclease P protein component [Elusimicrobium minutum Pei191]
gi|186971830|gb|ACC98815.1| Ribonuclease P protein component [Elusimicrobium minutum Pei191]
Length = 127
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L +R F + K G+ L N + LP++ V++K G A RNR
Sbjct: 11 LTRNFRLHLKRDFEDIFKNGKKVTHGGLVLWYRPNLGDDKLPKMAIAVSRKLGHAPLRNR 70
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R L+E RL + + HG +++ + I F C E ++
Sbjct: 71 TKRLLREVFRLN-KYKINHGVAFIISPRESGNLINFHTTCKVVFELWQKA 119
>gi|148658061|ref|YP_001278266.1| ribonuclease P protein component [Roseiflexus sp. RS-1]
gi|166226737|sp|A5V0B3|RNPA_ROSS1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148570171|gb|ABQ92316.1| ribonuclease P protein component [Roseiflexus sp. RS-1]
Length = 122
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ Q+ V++ + N L R GF K+ G AV RNR+
Sbjct: 1 MKRAYRLRTPEQYQRVRRDGRTWDAGMLML-NAAPNRRRLSRCGFVTPKRLGGAVTRNRI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RRR++EAVRL ++ G D V IA+ I F +L + ++R S
Sbjct: 60 RRRVREAVRLLYPQIV-PGWDIVFIARSPALAEIAFPQLQALVQQALQRAGVLQASDSGQ 118
Query: 120 S 120
S
Sbjct: 119 S 119
>gi|54295841|ref|YP_128256.1| hypothetical protein lpl2932 [Legionella pneumophila str. Lens]
gi|67461333|sp|Q5WSE7|RNPA_LEGPL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|53755673|emb|CAH17176.1| hypothetical protein lpl2932 [Legionella pneumophila str. Lens]
Length = 114
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
L K+ F V + F L N R+G ++KK A +RNR
Sbjct: 5 KKAQRLLKKNDFDFVFESAKKITTEDFI--FLFRENKLGYARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L+E+ R D +++A+ + + +
Sbjct: 63 IKRLLRESFRHT----NLPAVDIIILARPGLAKKTNLGINTKLNKTWEKL 108
>gi|256751457|ref|ZP_05492335.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749676|gb|EEU62702.1| ribonuclease P protein component [Thermoanaerobacter ethanolicus
CCSD1]
Length = 86
Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N+ RVG++V+KK G +V RNR+RR L E+ RL + +K G D + +A+ +
Sbjct: 5 ENNLGFNRVGYSVSKKIGKSVVRNRVRRLLHESFRL-LDIEIKTGFDIIFVARGKIVEAD 63
Query: 95 FKELCNHFVERVRR 108
F L N + + +
Sbjct: 64 FHTLKNSMRKLIMK 77
>gi|319406775|emb|CBI80408.1| ribonuclease P protein component [Bartonella sp. 1-1C]
Length = 105
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLL-----PRVGFTVTKKQGCAVERNRMRRRLKEAVR 69
+ GE R+GP F LE+ + RVGFTVT+K G AV+RNR++RRL+EAVR
Sbjct: 2 AARTGEKRRGPLFLLEIKPREQTAKTKAPLTARVGFTVTRKNGNAVQRNRIKRRLREAVR 61
Query: 70 LCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ ++ G DYV+I R+ L +PF L + R+RR +
Sbjct: 62 VGLVNEMEAGTDYVIIGHRNVLHVPFTSLISELSRRIRRKTQRQ 105
>gi|217033921|ref|ZP_03439345.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
gi|216943684|gb|EEC23129.1| hypothetical protein HP9810_870g53 [Helicobacter pylori 98-10]
Length = 161
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|149197355|ref|ZP_01874406.1| ribonuclease P [Lentisphaera araneosa HTCC2155]
gi|149139373|gb|EDM27775.1| ribonuclease P [Lentisphaera araneosa HTCC2155]
Length = 131
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F ++ E +G L + R+G V+K+ AV+RNR
Sbjct: 23 PKSHRLVKGHEFRYMRENAESIRGKSIILCYAPAPDDQR--RLGIVVSKRFHKHAVKRNR 80
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++EA R + + +V+I++ E+ ++ + ++K
Sbjct: 81 AKRIIREAYRHLQDKL--PNCWFVIISRAHLSGKSSIEVQEELLKLIDKSK 129
>gi|83859294|ref|ZP_00952815.1| ribonuclease P protein component [Oceanicaulis alexandrii HTCC2633]
gi|83852741|gb|EAP90594.1| ribonuclease P protein component [Oceanicaulis alexandrii HTCC2633]
Length = 131
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP-RVGFTVTKKQGCAVERNRMR 61
+ +RR F ++ P +++L + P R GFT TKK G AV RNR +
Sbjct: 5 RAARITERRDFLRAREAPRSAKPSVVIQMLVRKDDRDGPTRAGFTATKKIGNAVARNRAK 64
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
RRL+ A RL + G DYV IA+ + L + + R SR
Sbjct: 65 RRLRAAARLLLPLHGQPGTDYVFIARAQTAARSWPALLDDVKAALISLARRERGPTGGSR 124
Query: 122 K 122
Sbjct: 125 D 125
>gi|68249583|ref|YP_248695.1| ribonuclease P [Haemophilus influenzae 86-028NP]
gi|145630096|ref|ZP_01785878.1| ribonuclease P [Haemophilus influenzae R3021]
gi|145632384|ref|ZP_01788119.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148828169|ref|YP_001292922.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229846056|ref|ZP_04466168.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|319775068|ref|YP_004137556.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
gi|81335988|sp|Q4QLR2|RNPA_HAEI8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226720|sp|A5UID3|RNPA_HAEIG RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|68057782|gb|AAX88035.1| ribonuclease P protein component [Haemophilus influenzae 86-028NP]
gi|144984377|gb|EDJ91800.1| ribonuclease P [Haemophilus influenzae R3021]
gi|144987291|gb|EDJ93821.1| ribonuclease P [Haemophilus influenzae 3655]
gi|148719411|gb|ABR00539.1| ribonuclease P [Haemophilus influenzae PittGG]
gi|229811060|gb|EEP46777.1| ribonuclease P [Haemophilus influenzae 7P49H1]
gi|317449659|emb|CBY85865.1| Ribonuclease P protein component [Haemophilus influenzae F3047]
Length = 119
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 7 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 66 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNSAFAQILEKLWQRHIRLAQKS 119
>gi|295101865|emb|CBK99410.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii L2-6]
Length = 131
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ L VL + RVG T TKK G AV+RNR RR +K
Sbjct: 6 IRRNGEFGRVYARGKSYVNQALVLYVLKTRS--KRTRVGLTATKKIGHAVQRNRARRVMK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A+ + + G+D V +A+ + +L + + + + ++
Sbjct: 64 AAIDEHLDYNI-GGYDLVFVARGMTPRLKSWQLSAIVAKLFAQAGLPDKAKQPGAK 118
>gi|308179189|ref|YP_003918595.1| ribonuclease P protein component [Arthrobacter arilaitensis Re117]
gi|307746652|emb|CBT77624.1| ribonuclease P protein component [Arthrobacter arilaitensis Re117]
Length = 117
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSN-LLPRVGFTVTKKQGCAVERN 58
+ L+ + V+ G L + R GF V+K G AV+RN
Sbjct: 2 LPKNQRLRLAQDLTATVRSGVRSGRRNVVLYARHRETEEFQGDRFGFIVSKAVGIAVKRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+RR++E ++ + D+V+ A A + ++EL + + R +
Sbjct: 62 LTKRRMREIAQVLRR--VDGDVDFVVRALPGAAELSWEELNSQINSALAAVLRKIEAR 117
>gi|317182653|dbj|BAJ60437.1| ribonuclease P, protein component [Helicobacter pylori F57]
Length = 161
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDLLSCRLKDKKALCLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|317179624|dbj|BAJ57412.1| ribonuclease P, protein component [Helicobacter pylori F30]
Length = 161
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V VL G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAVLCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|300859526|ref|YP_003784509.1| ribonuclease P protein component [Corynebacterium
pseudotuberculosis FRC41]
gi|300686980|gb|ADK29902.1| ribonuclease P protein component [Corynebacterium
pseudotuberculosis FRC41]
gi|302207209|gb|ADL11551.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis C231]
gi|302331770|gb|ADL21964.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis 1002]
gi|308277462|gb|ADO27361.1| Ribonuclease P protein component [Corynebacterium
pseudotuberculosis I19]
Length = 118
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCA 54
+ + L +F ++KG+ + + + + PR G V+K G A
Sbjct: 2 LPSRHKLSSSDEFRRTIRKGKRAGRSTVVIHLRTHATAGEIAAVGGPRFGLVVSKAVGNA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
V R+ + R+L+ + + + V+ A A KEL + V +
Sbjct: 62 VTRHAVSRKLRHVLMGIKDQI-PQDAHIVVRALPPAATATSKELESDVRSGVEKL 115
>gi|71894023|ref|YP_279469.1| ribonuclease P protein component [Mycoplasma hyopneumoniae J]
gi|72081004|ref|YP_288062.1| ribonuclease P protein component [Mycoplasma hyopneumoniae 7448]
gi|123644592|sp|Q4A750|RNPA_MYCH7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123645364|sp|Q4A913|RNPA_MYCHJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71852150|gb|AAZ44758.1| ribonuclease P protein component [Mycoplasma hyopneumoniae J]
gi|71914128|gb|AAZ54039.1| ribonuclease P protein component [Mycoplasma hyopneumoniae 7448]
Length = 112
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I +KK +F + + + + ++ +G +V KK AV+RN
Sbjct: 1 MQKIRSIKKNWEFQAIINKKNQIVTNYLIFYYVKSD----FFEIGISVPKKFANAVKRNY 56
Query: 60 MRRRLKEAVRLCAEG-VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R++K A+ + + + VLIA+++ L + F+ + + KR
Sbjct: 57 YKRQIKNALYILWKKGEIFLNFRVVLIARKNFLPLSFETKYQKLAKIFKELKR 109
>gi|15828469|ref|NP_302732.1| ribonuclease P [Mycobacterium leprae TN]
gi|221230946|ref|YP_002504362.1| ribonuclease P [Mycobacterium leprae Br4923]
gi|1173101|sp|P46610|RNPA_MYCLE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808073|sp|B8ZTN6|RNPA_MYCLB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|886323|gb|AAB53139.1| ribonuclease P protein subunit [Mycobacterium leprae]
gi|13093899|emb|CAC32244.1| ribonuclease P protein component [Mycobacterium leprae]
gi|219934053|emb|CAR72812.1| ribonuclease P protein component [Mycobacterium leprae Br4923]
Length = 120
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLN--NNNSNLLPRVGFTVTKKQGCAVER 57
+S +++ +F VK G + V N + P VG + K G AVER
Sbjct: 2 LSACNRMRRSSEFDATVKFGLRAVQSDVIIHVWRGCNRDETKAPHVGLIIAKTVGSAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHD-YVLIAKRDALFIPFKELCNHFVERVR 107
+R+ RRL+ R + G D V+ A + + L +R
Sbjct: 62 HRVARRLRHVARTMLGELG--GADQVVIRALPSSRNVSSAWLAQQLRNGLR 110
>gi|300725386|ref|YP_003714725.1| RNase P [Xenorhabdus nematophila ATCC 19061]
gi|297631942|emb|CBJ92667.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA
[Xenorhabdus nematophila ATCC 19061]
Length = 108
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLK 65
+ F V + R + VL N PR+G TV K A ERNR++R +
Sbjct: 1 MLTPEHFTYVFQQPQRASTA-EITVLGRLNELGHPRIGLTVAKKNVKRAHERNRIKRLAR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
E+ RL + D+V++ ++ + +EL + RR+ R +
Sbjct: 60 ESFRLNQHKL--PSMDFVILVRKGVSELDNRELTEALGKLWRRHSRLVRAS 108
>gi|193217060|ref|YP_002000302.1| ribonuclease P protein component [Mycoplasma arthritidis 158L3-1]
gi|193002383|gb|ACF07598.1| ribonuclease P protein component [Mycoplasma arthritidis 158L3-1]
Length = 112
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N +LKK +F V + + + + +VG ++ K+ AV RN
Sbjct: 1 MTNKHVLKKNWEFKAVLAARKQVVSKNLIIYYVPSE----IFQVGISIPKQFANAVMRNH 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
R +++ +R + + ++IA++ L + FK R +
Sbjct: 57 YRNQIRAIIRELDKTNIL--FRTIIIARKTFLSLDFKTKQQEIKNLYERIVK 106
>gi|295103713|emb|CBL01257.1| ribonuclease P protein component, eubacterial [Faecalibacterium
prausnitzii SL3/3]
Length = 135
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P L VL RVG T TKK G AV+RNR RR +K
Sbjct: 6 IRRNSEFGRVYARGKSYVNPALVLYVLKTR--GRNTRVGLTATKKIGHAVQRNRARRVMK 63
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
A+ + + G+D + +A+ + +L + + + + + ++
Sbjct: 64 AAIDEHLDHNI-GGYDLIFVARGMTPKLKSWQLSSVVAKLFAQAGLPDKAKRPDAK 118
>gi|298246127|ref|ZP_06969933.1| ribonuclease P protein component [Ktedonobacter racemifer DSM
44963]
gi|297553608|gb|EFH87473.1| ribonuclease P protein component [Ktedonobacter racemifer DSM
44963]
Length = 152
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 12/105 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNN----------NNSNLLPRVGFTVTKK 50
+ L+K F V++ + + + + RVGF V+K+
Sbjct: 3 LRRAQRLRKNGDFQRVRQQRQSVSSRLLILAWSPHPKSDLESHLEPNVAITRVGFVVSKR 62
Query: 51 QGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
A RN ++R L EAVR + G+D VL A+ +
Sbjct: 63 ISKNATIRNTIKRLLSEAVRSLWHEI-PPGYDLVLTARHQLVGTD 106
>gi|288942816|ref|YP_003445056.1| ribonuclease P protein component [Allochromatium vinosum DSM 180]
gi|288898188|gb|ADC64024.1| ribonuclease P protein component [Allochromatium vinosum DSM 180]
Length = 128
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 6 ILKKRRQFALVKKGELRKGP-FFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L + QF V R G F + N PR+G + KK AV+RNR++R
Sbjct: 19 RLTQSSQFKRVFADASRAGRQGFVVLY--RPNGLDQPRLGLAIAKKCARRAVDRNRLKRI 76
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E+ R + + G D V++ + A P + L + +S
Sbjct: 77 ARESFRRSCQQL--PGVDIVVLCAQGAPREPNQRLFDVLERAWAHIGKS 123
>gi|88658516|ref|YP_507257.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
gi|88599973|gb|ABD45442.1| hypothetical protein ECH_0439 [Ehrlichia chaffeensis str. Arkansas]
Length = 119
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNN---SNLLPRVGFTVTKKQGCAVE 56
+ + +KKR+ F + G G L+V N + RVGFTV+KK G AV
Sbjct: 3 LKGVVTVKKRKCFLFARNNGTFVGGNGLFLQVAKEPNGLLEDGCVRVGFTVSKKVGKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR + + G+ Y+LI R + FKE+ +
Sbjct: 63 RNKVKRRFRVLAQSVLVKYAIKGYYYILIGNRYTPKVNFKEMSLRLKSYL 112
>gi|227549435|ref|ZP_03979484.1| ribonuclease P [Corynebacterium lipophiloflavum DSM 44291]
gi|227078512|gb|EEI16475.1| ribonuclease P [Corynebacterium lipophiloflavum DSM 44291]
Length = 121
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 4/121 (3%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNS--NLLPRVGFTVTKKQGCAVER 57
+ L QF + V + PR G V+K G AV R
Sbjct: 2 LPKANKLASPEQFRRTMAARTRAGSRTVVVHVAARTELALSGGPRFGLIVSKAVGNAVTR 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ + R+L+ V + + + D V+ A A EL + + + + S +
Sbjct: 62 HSVSRKLRHVVVSGVDTLAR-DTDVVVRALPPAATATSAELARDYEQALATALKKLRSKE 120
Query: 118 N 118
+
Sbjct: 121 S 121
>gi|291543428|emb|CBL16537.1| ribonuclease P protein component, eubacterial [Ruminococcus sp.
18P13]
Length = 114
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L + + F + K G L V N R+G T KK G AV RNR +R ++
Sbjct: 2 LNQNKDFLALYKRGVCIPLRHVVLYVRRNRF--GFNRLGVTAGKKLGNAVCRNRAKRLIR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV-ERVRRNKRSYYSGKNFS 120
+A R +L G D V++A+ L I EL + +R+ + +
Sbjct: 60 QAYRETEA-LLPCGVDLVIVARSSILQIKSPELTALLAGKGLRQLQAAAARDPQKQ 114
>gi|83313453|ref|YP_423717.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
gi|123540375|sp|Q2VZ17|RNPA_MAGSA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|82948294|dbj|BAE53158.1| RNase P protein component [Magnetospirillum magneticum AMB-1]
Length = 133
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSN---LLPRVGFTVTKKQGCAVER 57
+ + LKKR F V P L+ + ++ RVGFTV+KK G +V R
Sbjct: 3 ARLDRLKKRADFLRVAALRRKWAAPGLILQAAPASGTDLQADSLRVGFTVSKKVGNSVCR 62
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
NR RRRL+EAV G DYV+I +++ L P+
Sbjct: 63 NRARRRLREAVAQVFPAHASAGLDYVVIGRKETLERPYS 101
>gi|312601632|gb|ADQ90887.1| Ribonuclease P protein component [Mycoplasma hyopneumoniae 168]
Length = 112
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I +KK +F + + + + ++ +G +V KK AV+RN
Sbjct: 1 MQKIRSIKKNWEFQAIINKKNQIVTNYLIFYYVKSD----FFEIGISVPKKFANAVKRNY 56
Query: 60 MRRRLKEAVRLCAEG-VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R++K + + + + VLIA+++ L + F+ + + KR
Sbjct: 57 YKRQIKNVLYILWKKGEIFLNFRVVLIARKNFLPLSFETKYQKLAKIFKELKR 109
>gi|227876538|ref|ZP_03994649.1| hypothetical protein HMPREF0577_1950 [Mobiluncus mulieris ATCC
35243]
gi|227842852|gb|EEJ53050.1| hypothetical protein HMPREF0577_1950 [Mobiluncus mulieris ATCC
35243]
Length = 117
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + L K ++ LV + R+ + +S+ R+G V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYPARIGLVVPKKSVRLATRRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR + G V +A+ A + + EL + + +R
Sbjct: 62 VKRRLRGAVREHLDE-FPPGSLTVFLARPAADKVAYSELDSQLESLIAGWQRPQQK 116
>gi|319897490|ref|YP_004135687.1| ribonuclease p protein component [Haemophilus influenzae F3031]
gi|329123021|ref|ZP_08251592.1| ribonuclease P protein component [Haemophilus aegyptius ATCC 11116]
gi|317432996|emb|CBY81367.1| Ribonuclease P protein component [Haemophilus influenzae F3031]
gi|327471952|gb|EGF17392.1| ribonuclease P protein component [Haemophilus aegyptius ATCC 11116]
Length = 119
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L QF V + R + +L N+ PR+G TV K A ERNR+
Sbjct: 7 SRELRLLTPIQFKNVFEQPFRASTP-EITILARKNNLEHPRLGLTVAKKHLKRAHERNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+R ++E+ RL + +D+V +AK + + +R+ R
Sbjct: 66 KRLVRESFRLSQHRL--PAYDFVFVAKNGIGKLDNSTFAQILEKLWQRHIRLALKS 119
>gi|330505871|ref|YP_004382740.1| ribonuclease P [Pseudomonas mendocina NK-01]
gi|328920157|gb|AEB60988.1| ribonuclease P [Pseudomonas mendocina NK-01]
Length = 84
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
K AVERNR++R+++E+ RL + + G D V++A++ + EL F +
Sbjct: 1 MIGKKSVKLAVERNRIKRQIRESFRLNQDNL--TGWDIVVVARKGLGDLENGELAQQFGK 58
Query: 105 RVRRNKRSYYSGKN 118
+R RS S
Sbjct: 59 LWKRLARSRPSRDA 72
>gi|146297760|ref|YP_001181531.1| ribonuclease P protein component [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411336|gb|ABP68340.1| ribonuclease P protein component [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 143
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M I +KK +F ++KG + L N R+G +++ K G A RNR
Sbjct: 25 MKKIVSIKKSEEFEACIRKGRFAAEKNVVVYSLKNGLE--YSRLGVSMSSKLGKATARNR 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R +K +K G D V++A++ A I K+ + +R +
Sbjct: 83 FKRIVKAWYLENF-ERIKKGFDIVVLARKTKEEKIKAREICLKDYRDELERAFKRLR 138
>gi|256381075|ref|YP_003104735.1| ribonuclease P protein [Actinosynnema mirum DSM 43827]
gi|255925378|gb|ACU40889.1| ribonuclease P protein [Actinosynnema mirum DSM 43827]
Length = 81
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ +VGF V+K G +V R+R+ RRL+ +R + G V+ A A
Sbjct: 6 PTLDAESKVGFVVSKAVGNSVVRHRVSRRLRHVLRDRLASL-PAGSSLVVRALPPAATAS 64
Query: 95 FKELCNHFVERVRRNKR 111
EL +RR R
Sbjct: 65 SAELAEDVDAALRRLVR 81
>gi|315585835|gb|ADU40216.1| ribonuclease P [Helicobacter pylori 35A]
Length = 161
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|313894728|ref|ZP_07828289.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976637|gb|EFR42091.1| ribonuclease P protein component [Selenomonas sp. oral taxon 137
str. F0430]
Length = 130
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S ++K+R F V KG G + L +L ++ + +VGF KK G A R+R
Sbjct: 8 LSRAQMIKRRSDFQNVYHKGTAFPGRYIILYILR--DARVAGKVGFAAGKKLGSAPVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+R ++EA RL + + +LI + ++ + RR K +G
Sbjct: 66 TKRLMREAYRLMQYEL-RPDVGILLIGRAGLADHKMQDAAADLKKLARRAKILIPAGHAP 124
Query: 120 SRK 122
R+
Sbjct: 125 RRE 127
>gi|311065164|ref|YP_003971890.1| ribonuclease P protein component RnpA [Bifidobacterium bifidum
PRL2010]
gi|310867484|gb|ADP36853.1| RnpA Ribonuclease P protein component [Bifidobacterium bifidum
PRL2010]
Length = 123
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--------RVGFTVTKKQGCAV 55
+ LK R F V K + + ++ R+G V+K G AV
Sbjct: 1 MKRLKSHRDFIAVLKRRFKVTDSDIVVHFVVHDDTRDVQASADIMRRMGLAVSKAVGNAV 60
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RR + R E +L D V+ AK A + F +L F +
Sbjct: 61 TRNRVKRRFRVLAR-RYEDMLPMQCDIVVRAKPSASRVDFADLDRQFSRCFAKV 113
>gi|313891372|ref|ZP_07824988.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
gi|313120147|gb|EFR43323.1| ribonuclease P protein component-like protein [Dialister
microaerophilus UPII 345-E]
Length = 127
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +++ ++F + +G + V N R+GF TKK G AV RNR
Sbjct: 15 LHRSYRVRRSKEFRRIYSRGRRFSNRSALMYVFNVR--RSGVRIGFVATKKIGTAVMRNR 72
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +KE RL + GHD +++A ++E + +
Sbjct: 73 AKRLMKEVYRLHRHEL-NSGHDAIMLANAFLTRATYEEAEEAILSLWHKA 121
>gi|313103918|pdb|3OK7|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna
gi|313103921|pdb|3OKB|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna And In The Presence Of 5' Leader
gi|325534016|pdb|3Q1Q|A Chain A, Structure Of A Bacterial Ribonuclease P Holoenzyme In
Complex With Trna
gi|325534019|pdb|3Q1R|A Chain A, Crystal Structure Of A Bacterial Rnase P Holoenzyme In
Complex With Trna And In The Presence Of 5' Leader
Length = 118
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 23 KEGKSLQNEYFVVLFRKN--GLDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 79
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
G D V+I ++ + F + + ++R +
Sbjct: 80 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE 117
>gi|254293248|ref|YP_003059271.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
gi|254041779|gb|ACT58574.1| hypothetical protein Hbal_0880 [Hirschia baltica ATCC 49814]
Length = 167
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNN-----------------------SNL 39
+ L+ RR F V KG + ++ + S
Sbjct: 13 RVERLRVRRAFLFVAKGYAERRRSVVVQARPRLSLQVDSVTNPPSQNNINTPVNKLISPK 72
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
+ GFT TKK G AV RNR +RRL+EA DYV IA+RD + L
Sbjct: 73 IAGAGFTATKKIGGAVVRNRAKRRLREASSQLMYKHALADVDYVFIARRDTATRQWDGLL 132
Query: 100 NHFVERVRRNKRSYYSGKN 118
+ + ++ SG
Sbjct: 133 DDVESALLSLRQKILSGDP 151
>gi|332674214|gb|AEE71031.1| ribonuclease P protein component [Helicobacter pylori 83]
Length = 161
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|33357536|pdb|1NZ0|A Chain A, Rnase P Protein From Thermotoga Maritima
gi|33357537|pdb|1NZ0|C Chain C, Rnase P Protein From Thermotoga Maritima
gi|33357538|pdb|1NZ0|B Chain B, Rnase P Protein From Thermotoga Maritima
gi|33357539|pdb|1NZ0|D Chain D, Rnase P Protein From Thermotoga Maritima
Length = 118
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 23 KEGKSLQNEYFVVLFRKN--GXDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 79
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
G D V+I ++ + F + + ++R +
Sbjct: 80 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE 117
>gi|311742161|ref|ZP_07715971.1| ribonuclease P protein component [Aeromicrobium marinum DSM 15272]
gi|311314654|gb|EFQ84561.1| ribonuclease P protein component [Aeromicrobium marinum DSM 15272]
Length = 121
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
++ +F +++G P V + VGF V+K G AV RNR++RR
Sbjct: 6 HRMRDGEEFRRTMRRGTKAVTPTVVAHVAPGTDGVRS--VGFVVSKAVGPAVVRNRVKRR 63
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF--KELCNHFVERVRRNKRSYYSGKNFS 120
L+ + E + G V+ A A +L +RR+ + S
Sbjct: 64 LRHLMAQRIERL-PAGTRVVVRALPPAATADSLADDLDASLDRGLRRSADRTATSVGRS 121
>gi|160914810|ref|ZP_02077024.1| hypothetical protein EUBDOL_00817 [Eubacterium dolichum DSM 3991]
gi|158433350|gb|EDP11639.1| hypothetical protein EUBDOL_00817 [Eubacterium dolichum DSM 3991]
Length = 108
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K R+F+ + + P F++ V + RVG + KK G AV RN+
Sbjct: 1 MKKEYRIKSTREFSSIMNYKKFYACPSFTIYVKPRQQEHA--RVGISAGKKLGNAVMRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++E V + D +++ + + H V+ K
Sbjct: 59 IKRQVREMVHDIYT--FEEKFDTIILVRVKYHEESYINNKKHLERLVKHVK 107
>gi|15646057|ref|NP_208239.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
gi|2500593|sp|P55997|RNPA_HELPY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|2314624|gb|AAD08489.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
26695]
Length = 161
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGF------------------- 45
LK + +F V KG + PFFSL VL+ + + GF
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSQEPPKEKAGFKDPLFCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|254788527|ref|YP_003075956.1| ribonuclease P [Teredinibacter turnerae T7901]
gi|237687237|gb|ACR14501.1| ribonuclease P protein component [Teredinibacter turnerae T7901]
Length = 136
Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L ++ V K +L + N+ R+G + K AV+RNR+
Sbjct: 10 RKSQRLLTSGNYSAVFDDAQIKASHPHFLILASPNAATHARLGLVIAKKNVRHAVDRNRL 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+R ++E R + D +++A+R + + +E + R + +
Sbjct: 70 KRLIRETFRGKQHQM--PAIDAIVLARRGSDQLNNRETAKILDKLWERVAKKANNPNPQQ 127
Query: 121 R 121
R
Sbjct: 128 R 128
>gi|317181131|dbj|BAJ58917.1| ribonuclease P, protein component [Helicobacter pylori F32]
Length = 161
Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|170289144|ref|YP_001739382.1| ribonuclease P protein component [Thermotoga sp. RQ2]
gi|238688852|sp|B1LBK1|RNPA_THESQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|170176647|gb|ACB09699.1| ribonuclease P protein component [Thermotoga sp. RQ2]
Length = 117
Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+GE + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGESLQNEYFVVLFRKN--GLDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
G D V+I ++ + F + + ++R +
Sbjct: 79 PKGFDIVVIPRKKLSEEFERVDFWTIREKLLNLLKRIE 116
>gi|307265439|ref|ZP_07546995.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919553|gb|EFN49771.1| ribonuclease P protein component [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 86
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N+ RVG++V+KK G +V RNR+RR L E+ R + +K G D + +A+ +
Sbjct: 5 ENNLGFNRVGYSVSKKIGKSVVRNRVRRLLHESFR-FLDIEIKTGFDIIFVARGKIVEAD 63
Query: 95 FKELCNHFVERVRRNKRSYYSGKNF 119
F L N + + K Y+G
Sbjct: 64 FHTLKNSMRKLI--MKTPLYAGNER 86
>gi|261838723|gb|ACX98489.1| ribonuclease P protein component [Helicobacter pylori 51]
Length = 161
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|73667200|ref|YP_303216.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
gi|72394341|gb|AAZ68618.1| hypothetical protein Ecaj_0584 [Ehrlichia canis str. Jake]
Length = 119
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNS---NLLPRVGFTVTKKQGCAVE 56
+ + LKKR+ F + G G L+V+ + + RVGFTV+KK G AV
Sbjct: 3 LKGVTTLKKRKCFLFARNNGAFIGGFGLFLQVVKEPHGELLDGTIRVGFTVSKKVGKAVI 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN+++RR + R G+ Y+LI R + FKE+ + + ++
Sbjct: 63 RNKVKRRFRILARDVLVKHANKGYYYILIGNRYTPKVSFKEMSLRLISYLNTSR 116
>gi|118620078|ref|YP_908410.1| ribonuclease P [Mycobacterium ulcerans Agy99]
gi|183985457|ref|YP_001853748.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
gi|166226726|sp|A0PX70|RNPA_MYCUA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690944|sp|B2HNT8|RNPA_MYCMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|118572188|gb|ABL06939.1| ribonuclease P protein component RnpA [Mycobacterium ulcerans
Agy99]
gi|183178783|gb|ACC43893.1| ribonuclease P protein component RnpA [Mycobacterium marinum M]
Length = 120
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQGCAVER 57
+S +++ +F V++G P + V ++ PRVG + K G AVER
Sbjct: 2 LSARNRMRRSTEFDATVRQGVRTVQPDVIVHVRRAKECAADSSPRVGLIIAKSVGTAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 HRVARRLRHVARPMLMNLHPCD-RVVIRALPSSRHVSSAWLEQQLRSGLRRA 112
>gi|254779959|ref|YP_003058066.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
gi|254001872|emb|CAX30122.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Helicobacter pylori B38]
Length = 161
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPREKEGFKDPLFCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|71909812|ref|YP_287399.1| ribonuclease P protein [Dechloromonas aromatica RCB]
gi|71849433|gb|AAZ48929.1| ribonuclease P protein component [Dechloromonas aromatica RCB]
Length = 123
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 4/120 (3%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ L K +F+ V +G L SN R+G V KK AV+RN
Sbjct: 6 ARRYRLTKTDEFSSVFGFRKAIRGKLLMLHYQPRPESNTEARLGLVVGKKLLKRAVDRNL 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++R ++E R D V+ + K++ + FV + + +R
Sbjct: 66 VKRIVREQFR--LRRAALPPVDLVVRLACKPAPLDRKQVADDFVALLDKLQRPRNKRDGQ 123
>gi|121998019|ref|YP_001002806.1| ribonuclease P protein component [Halorhodospira halophila SL1]
gi|254808068|sp|A1WWE2|RNPA_HALHL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|121589424|gb|ABM62004.1| ribonuclease P protein component [Halorhodospira halophila SL1]
Length = 122
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L +RR+F V + + V N PR+G V K+ A++R+R++R
Sbjct: 11 ARLLRRREFEGVLRAPEWRTANRYFRVSARQNQCGRPRLGLAVPKRVLRLAIQRHRVKRI 70
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++E+ R+ G+ HD+V+ + L + E +
Sbjct: 71 IRESFRVRQGGL--PDHDFVVGVRGAVAEADNATLFSALEELWAHAR 115
>gi|186682019|ref|YP_001865215.1| ribonuclease P [Nostoc punctiforme PCC 73102]
gi|238691258|sp|B2J0Q5|RNPA_NOSP7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|186464471|gb|ACC80272.1| ribonuclease P protein component [Nostoc punctiforme PCC 73102]
Length = 140
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 24/133 (18%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP------------------ 41
+ LK R+ F V + G R G + +L L S
Sbjct: 3 LPKANRLKSRKDFQAVFREGIRRNGSYLTLRALKPLYSRKPSLDTATQTTQPIESVHISS 62
Query: 42 --RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP--FKE 97
TK AV RNR++R++ A+ + G V I K A +
Sbjct: 63 IRIGISISTKVSKRAVVRNRIKRQITSALYSLLPRLA-PGWRLVFIVKPTAAESKCVSPQ 121
Query: 98 LCNHFVERVRRNK 110
+ + + +
Sbjct: 122 FLQELEQLLAQAE 134
>gi|261840123|gb|ACX99888.1| ribonuclease P [Helicobacter pylori 52]
Length = 161
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLV--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|15644212|ref|NP_229262.1| ribonuclease P protein component [Thermotoga maritima MSB8]
gi|9789801|sp|Q9X1H4|RNPA_THEMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4982028|gb|AAD36531.1|AE001797_11 ribonuclease P protein component [Thermotoga maritima MSB8]
Length = 117
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K+G+ + +F + N R+G V +K G A RN+++R ++E R +GV+
Sbjct: 22 KEGKSLQNEYFVVLFRKN--GLDYSRLGIVVKRKFGKATRRNKLKRWVREIFRRN-KGVI 78
Query: 77 KHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
G D V+I ++ + F + + ++R +
Sbjct: 79 PKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE 116
>gi|304412703|ref|ZP_07394306.1| ribonuclease P protein component [Shewanella baltica OS183]
gi|307305832|ref|ZP_07585578.1| ribonuclease P protein component [Shewanella baltica BA175]
gi|304348913|gb|EFM13328.1| ribonuclease P protein component [Shewanella baltica OS183]
gi|306911325|gb|EFN41751.1| ribonuclease P protein component [Shewanella baltica BA175]
Length = 107
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLK 65
+ QF V K + +L N+ PR+G TV K+ A +RNR++R ++
Sbjct: 1 MLTPAQFKSVFSNP-IKASSAEITLLAIPNTEQHPRMGLTVAKRFVKRANQRNRIKRVIR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ RL + D V++ + + + E+ + R+ R
Sbjct: 60 DSFRLNQHDI--PHLDIVVLVRNGVMEMENAEINKLIEKLWRKLSRR 104
>gi|154250756|ref|YP_001411580.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
gi|154154706|gb|ABS61923.1| ribonuclease P protein component [Parvibaculum lavamentivorans
DS-1]
Length = 134
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
MS I L+KRR F + R L+ + PRVGFTVT+K G +V RNR
Sbjct: 1 MSQIERLRKRRDFLAAARASKRAERGLVLQANERGD-IAPPRVGFTVTRKVGSSVVRNRA 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+RRL+ A K G+DYVLI ++ L +
Sbjct: 60 KRRLRAAAAEILPLAAKDGYDYVLIGRQATLTRRWS 95
>gi|188528218|ref|YP_001910905.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|238691954|sp|B2UVJ3|RNPA_HELPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188144458|gb|ACD48875.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
Shi470]
gi|308062711|gb|ADO04599.1| ribonuclease P protein component [Helicobacter pylori Cuz20]
Length = 161
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|317010180|gb|ADU80760.1| ribonuclease P protein component [Helicobacter pylori India7]
Length = 161
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDVSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|212715147|ref|ZP_03323275.1| hypothetical protein BIFCAT_00033 [Bifidobacterium catenulatum DSM
16992]
gi|212661828|gb|EEB22403.1| hypothetical protein BIFCAT_00033 [Bifidobacterium catenulatum DSM
16992]
Length = 91
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVG V+K G AV RN ++RR + R E +L D VL AK A F L
Sbjct: 17 RVGLAVSKAVGNAVTRNTVKRRFRVLARK-YESLLPESCDIVLRAKPSAARADFLSLEQQ 75
Query: 102 FVERVRRNKRS 112
KR
Sbjct: 76 MASCFEAVKRK 86
>gi|302336543|ref|YP_003801750.1| ribonuclease P protein component [Olsenella uli DSM 7084]
gi|301320383|gb|ADK68870.1| ribonuclease P protein component [Olsenella uli DSM 7084]
Length = 106
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +K +R+F V G R + + +V F K+ G AV RNR +R
Sbjct: 1 METIKSKREFEKVFSGGKRVNHRLVRACVLRTDEGGFGKVAFVAPKRLGNAVYRNRCKRV 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+EA R G G D +L+A R E+ + R
Sbjct: 61 LREAAR--LSGFPLEGADVILLATRQTHESHPSEVGRAIASLIERV 104
>gi|121635909|ref|YP_976132.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|121639834|ref|YP_980058.1| ribonuclease P [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663790|ref|YP_001285313.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148825131|ref|YP_001289885.1| ribonuclease P [Mycobacterium tuberculosis F11]
gi|224992329|ref|YP_002647019.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800973|ref|YP_003033975.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|254366459|ref|ZP_04982503.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|254548927|ref|ZP_05139374.1| ribonuclease P [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|260184852|ref|ZP_05762326.1| ribonuclease P [Mycobacterium tuberculosis CPHL_A]
gi|260198983|ref|ZP_05766474.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|260203136|ref|ZP_05770627.1| ribonuclease P [Mycobacterium tuberculosis K85]
gi|289441366|ref|ZP_06431110.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289445524|ref|ZP_06435268.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289567880|ref|ZP_06448107.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289572575|ref|ZP_06452802.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289747767|ref|ZP_06507145.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289748461|ref|ZP_06507839.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289756058|ref|ZP_06515436.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289760096|ref|ZP_06519474.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|289764114|ref|ZP_06523492.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|294995605|ref|ZP_06801296.1| ribonuclease P [Mycobacterium tuberculosis 210]
gi|297636610|ref|ZP_06954390.1| ribonuclease P [Mycobacterium tuberculosis KZN 4207]
gi|297733605|ref|ZP_06962723.1| ribonuclease P [Mycobacterium tuberculosis KZN R506]
gi|298527395|ref|ZP_07014804.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|313660936|ref|ZP_07817816.1| ribonuclease P [Mycobacterium tuberculosis KZN V2475]
gi|2808708|emb|CAA16236.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium tuberculosis H37Rv]
gi|31620694|emb|CAD96140.1| RIBONUCLEASE P PROTEIN COMPONENT RNPA (RNaseP PROTEIN) (RNase P
PROTEIN) (PROTEIN C5) [Mycobacterium bovis AF2122/97]
gi|121491556|emb|CAL70013.1| Ribonuclease p protein component rnpA (RNaseP) [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|121495482|emb|CAL73971.1| Ribonuclease P protein component rnpA [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134151971|gb|EBA44016.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
str. Haarlem]
gi|148507942|gb|ABQ75751.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|148723658|gb|ABR08283.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
F11]
gi|224775445|dbj|BAH28251.1| ribonuclease P [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322477|gb|ACT27080.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 1435]
gi|289414285|gb|EFD11525.1| ribonuclease P [Mycobacterium tuberculosis T46]
gi|289418482|gb|EFD15683.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
CPHL_A]
gi|289537006|gb|EFD41584.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
K85]
gi|289541633|gb|EFD45282.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T17]
gi|289688295|gb|EFD55783.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
02_1987]
gi|289689048|gb|EFD56477.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
T92]
gi|289696645|gb|EFD64074.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
EAS054]
gi|289711620|gb|EFD75636.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
GM 1503]
gi|289715660|gb|EFD79672.1| ribonuclease p protein component rnpa [Mycobacterium tuberculosis
T85]
gi|298497189|gb|EFI32483.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
94_M4241A]
gi|326905756|gb|EGE52689.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
W-148]
gi|328460701|gb|AEB06124.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 4207]
Length = 125
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+++ F VK G + S PRVG + K G AVER+R+ RR
Sbjct: 15 NRMRRSADFETTVKHGMRTVRSDMVVYWWR--GSGGGPRVGLIIAKSVGSAVERHRVARR 72
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+ + + H V+ A + + L +RR
Sbjct: 73 LRHVAGSIVKELHPSDH-VVIRALPSSRHVSSARLEQQLRCGLRRA 117
>gi|319440489|ref|ZP_07989645.1| ribonuclease P protein component [Corynebacterium variabile DSM
44702]
Length = 102
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV-----LKHGHDYVLIAKRDALFI 93
PRVG V+K G AV R+ + RRL+ V + L+ VL A A
Sbjct: 25 GGPRVGLVVSKAVGNAVTRHAVSRRLRHTVGRVLDDAEMAGTLRPDLSIVLRALPAAATA 84
Query: 94 PFKELCNHFVERVRRN 109
EL +RR
Sbjct: 85 TSGELERDVRHALRRL 100
>gi|307699980|ref|ZP_07637031.1| ribonuclease P protein component [Mobiluncus mulieris FB024-16]
gi|307615018|gb|EFN94236.1| ribonuclease P protein component [Mobiluncus mulieris FB024-16]
Length = 117
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + L K ++ LV + R+ + +S+ R+GF V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYPARIGFVVPKKSVRLATRRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR G V +A+ A + ++EL + + +R
Sbjct: 62 VKRRLRGAVREHLGE-FPPGSLTVFLARPAADKVAYRELDSQLESLIAGWQRPQQK 116
>gi|259508316|ref|ZP_05751216.1| ribonuclease P protein component [Corynebacterium efficiens YS-314]
gi|259164134|gb|EEW48688.1| ribonuclease P protein component [Corynebacterium efficiens YS-314]
Length = 116
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLL------------PRVGFTVTKKQGCAVERNRMRRRL 64
+KG + + ++ S PR G V+K G AV R+R RRL
Sbjct: 2 RKGRRAGSSTVVVHLWDSAESLDGTGEKGEVASFGGPRFGLIVSKAVGNAVIRHRTSRRL 61
Query: 65 KEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+ + +L H V+ A + ++L +R+ R
Sbjct: 62 RHVCARIAADSPELLTPTHHVVIRALAGSGQASSQDLERDIRHGLRKAGRVR 113
>gi|300115606|ref|YP_003762181.1| ribonuclease P protein component [Nitrosococcus watsonii C-113]
gi|299541543|gb|ADJ29860.1| ribonuclease P protein component [Nitrosococcus watsonii C-113]
Length = 119
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERNR 59
+ + L F G F++ +NS PR+G + K AV+RNR
Sbjct: 7 ARLMRLADPDDFKQAFTAGGRVSNKAFTVLY--RSNSLEYPRLGMAIPRKHFSRAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R ++E+ R + G D V+++K EL + + R +
Sbjct: 65 IKRLVRESFRQRQRVLG--GRDLVVLSKPGINRRSNSELLSCLERQWMRLVK 114
>gi|217033103|ref|ZP_03438567.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298735586|ref|YP_003728109.1| ribonuclease P protein component [Helicobacter pylori B8]
gi|216945176|gb|EEC23867.1| hypothetical protein HPB128_27g10 [Helicobacter pylori B128]
gi|298354773|emb|CBI65645.1| ribonuclease P protein component [Helicobacter pylori B8]
Length = 161
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLA--LKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|297380699|gb|ADI35586.1| ribonuclease P protein component [Helicobacter pylori v225d]
gi|308064205|gb|ADO06092.1| ribonuclease P protein component [Helicobacter pylori Sat464]
Length = 161
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|294101693|ref|YP_003553551.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
gi|293616673|gb|ADE56827.1| ribonuclease P protein component [Aminobacterium colombiense DSM
12261]
Length = 123
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
LKK ++ V + G KG L + + R+G V K+QG A RNR RR L
Sbjct: 2 RLKKGWEYDYVFRTGSRFKGELVRLLFVEAPDDR--TRIGLAVGKRQGSACVRNRGRRIL 59
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
KE++R +K V + L ++ + V + R
Sbjct: 60 KESIRRILP-WVKGTWWCVFSLRTAGLEANAYDVYDDMVALLGRV 103
>gi|315105161|gb|EFT77137.1| ribonuclease P protein component [Propionibacterium acnes HL050PA2]
Length = 140
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 63 RSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 121
Query: 94 PFKELCNHFVERVRRNKRSY 113
P + + R
Sbjct: 122 P-DRVAKDLDGAWHQALRKL 140
>gi|269114776|ref|YP_003302539.1| ribonuclease P protein component [Mycoplasma hominis]
gi|62177286|gb|AAX70925.1| RNAse P [Mycoplasma hominis ATCC 23114]
gi|268322401|emb|CAX37136.1| Ribonuclease P protein component [Mycoplasma hominis ATCC 23114]
Length = 109
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
++KK +F + + N + +VG ++ K+ AV RN +
Sbjct: 4 KNNVVKKNWEFQKILDSHNQVVSKNLIIYF----NKSDFFKVGISIPKQFANAVLRNHYK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+++ +R ++ V+IA++ L + + + + R
Sbjct: 60 NQIRSILRNI--DFSTLNYETVIIARKGFLSLDWNQKVKEVKKLYERI 105
>gi|58584949|ref|YP_198522.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419265|gb|AAW71280.1| RNase P protein component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 119
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 1 MSNICILKKRRQFALVKKGE------LRKGPFFSLEVLNNNNSNLL---PRVGFTVTKKQ 51
M N I K++ F+L K + +G + SL + RVG ++KK
Sbjct: 1 MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKA 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G A +RN+++RRL+ R + G+ Y+++ ++ + +K L +++ K
Sbjct: 61 GKATKRNKIKRRLRVLARTNILDISNIGYYYIILTHKNIMQASYKNLRKDITICLKKIK 119
>gi|183602666|ref|ZP_02964030.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis HN019]
gi|183218084|gb|EDT88731.1| ribonuclease P protein component [Bifidobacterium animalis subsp.
lactis HN019]
Length = 93
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G V+K G AV RN ++RR + + D VL AK A F+ L
Sbjct: 20 RLGLAVSKSVGNAVVRNTVKRRFRVLAHRYEHEL-PADCDIVLRAKPGAAHASFQSLEAQ 78
Query: 102 FVERVRRNKRSYYSG 116
R R
Sbjct: 79 IQALFRAVMRKSEQS 93
>gi|15612406|ref|NP_224059.1| putative ribonuclease P protein component [Helicobacter pylori J99]
gi|9789807|sp|Q9ZJH0|RNPA_HELPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4155953|gb|AAD06918.1| putative RIBONUCLEASE P PROTEIN COMPONENT [Helicobacter pylori J99]
Length = 161
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V A L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGFALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNK 110
+ K
Sbjct: 136 LTSIK 140
>gi|292493918|ref|YP_003529357.1| ribonuclease P protein component [Nitrosococcus halophilus Nc4]
gi|291582513|gb|ADE16970.1| ribonuclease P protein component [Nitrosococcus halophilus Nc4]
Length = 119
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERNR 59
+ L F V G+ G F++ +NS PR+G + K AV+RNR
Sbjct: 7 TRSMRLVDPGDFKQVFAAGKRASGKAFTVLY--RSNSLDHPRLGMAIPRKHFSRAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++R ++E+ R + G D V++++ +L + R
Sbjct: 65 IKRLIRESFRQWQRVLG--GRDLVVLSRPGINQRSNSDLLRCLEGQWMRLIERRN 117
>gi|126661518|ref|ZP_01732567.1| ribonuclease P [Cyanothece sp. CCY0110]
gi|126617203|gb|EAZ88023.1| ribonuclease P [Cyanothece sp. CCY0110]
Length = 127
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNL---LPRVGFTVT-KKQGCAV 55
+ L+ + F V +G+ + + V N+ + G +++ K AV
Sbjct: 3 LPKQNRLRHPQAFKTVYNRGKRYQSSHLVMRVFCKNDQQEAKLPTQFGISISQKVSKKAV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR++R++K +RL + K V++ KR+ ++ E + + +
Sbjct: 63 VRNRLKRQIKAVIRLFLPRI-KQRCQVVIVVKRNTTECKYEHFLRELEELLIKAE 116
>gi|317013214|gb|ADU83822.1| ribonuclease P protein component [Helicobacter pylori Lithuania75]
Length = 161
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LASIKNYMNKA 146
>gi|34499861|ref|NP_904076.1| ribonuclease P [Chromobacterium violaceum ATCC 12472]
gi|48474348|sp|Q7NPT6|RNPA_CHRVO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|34105711|gb|AAQ62065.1| ribonuclease P [Chromobacterium violaceum ATCC 12472]
Length = 121
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L K +F+ V ++ F +V N RVG V KK AV RN +
Sbjct: 7 RRAHRLLKTDEFSSVFSLRQQRSNAF-FQVFARPNGLDHARVGLVVGKKVAKRAVRRNYI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+R ++E RL +G+ G DYV+ AK E + R S +
Sbjct: 66 KRCVREWFRLNQQGLD--GVDYVVRAKTAFTREQRAEAVTALQALFAKLARCRASSSS 121
>gi|88798541|ref|ZP_01114125.1| ribonuclease P [Reinekea sp. MED297]
gi|88778641|gb|EAR09832.1| ribonuclease P [Reinekea sp. MED297]
Length = 120
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L QF V K P +L +NS PR+GF ++KK AV+RNR++R
Sbjct: 12 RLLSPAQFRTVFDQVDVKAPAEHCLLLARHNSENRPRLGFILSKKNVRLAVQRNRIKRYA 71
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+E +RL + + D + + ++ + EL ++ + R S
Sbjct: 72 REYLRLHQQEL--PPLDIIFMGRKGLGSLSDAELHRLVRKQFEKLSRRARS 120
>gi|188579257|ref|YP_001916186.1| ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188523709|gb|ACD61654.1| ribonuclease P protein component [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 109
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 32 LNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
L+ + PR+G V++K AV RNR++R L++A+R + G DYV++A+ A
Sbjct: 3 LHWRTGDTPPRLGMAVSRKVDTRAVGRNRIKRVLRDAMRHLLPELA--GGDYVIVARSAA 60
Query: 91 LFIPFKELCNHFVERVRRN 109
++ + F+ +RR
Sbjct: 61 AKATNPQIRDAFLRLLRRA 79
>gi|257452992|ref|ZP_05618291.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
gi|317059532|ref|ZP_07924017.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
gi|313685208|gb|EFS22043.1| ribonuclease P protein component [Fusobacterium sp. 3_1_5R]
Length = 110
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+K + F + K G+ G + L N ++ + GF +KK G AV RNR++R
Sbjct: 2 FHTIKSQDNFQNIYKTGKKIYGTYSLLFYKENQMNHN--QYGFVASKKIGNAVCRNRIKR 59
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVR 107
+E ++ +L ++L+AK+ + I ++++ + +
Sbjct: 60 LFREFIKQNE-ILLPKFTTFILVAKKKSGEEIKTIKYEQIEKDLYKIFK 107
>gi|210135614|ref|YP_002302053.1| ribonuclease P protein component [Helicobacter pylori P12]
gi|226741390|sp|B6JNU5|RNPA_HELP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|210133582|gb|ACJ08573.1| ribonuclease P protein component [Helicobacter pylori P12]
Length = 161
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDKVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKALYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|302872914|ref|YP_003841550.1| ribonuclease P protein component [Caldicellulosiruptor obsidiansis
OB47]
gi|302575773|gb|ADL43564.1| ribonuclease P protein component [Caldicellulosiruptor obsidiansis
OB47]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N S + R G +++ K G A RNR
Sbjct: 1 MNRYVTLKKNEEFEACIRRGRFAAQEKVVVYSLKNGLS--ISRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA++ A I K+ + +R +
Sbjct: 59 FKRIVRAWILENMDKI-KQGFDIVVIARKIKDDKIKAREIHLKDYRDDLERAFKRLR 114
>gi|75677254|ref|YP_319675.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
gi|74422124|gb|ABA06323.1| ribonuclease P protein [Nitrobacter winogradskyi Nb-255]
Length = 111
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F G P F ++ ++ + R+GFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRADFLAAAHGPRVSTPAFVVQNRRRSD-DGAIRIGFTVTKKNGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
E V+ ++ DYV+I +R AL F + + ++R R
Sbjct: 62 ELVKRVDAVSMRPHSDYVIIGRRAALNRRFAVMLDDLRSALQRLDRR 108
>gi|308183544|ref|YP_003927671.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
gi|308065729|gb|ADO07621.1| ribonuclease P protein component [Helicobacter pylori PeCan4]
Length = 161
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKESPKGKEGFKDPLSCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCCHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|46397716|sp|Q7X5L4|RNPA_THEAQ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30908455|gb|AAO88969.1| RNase P protein subunit [Thermus aquaticus]
Length = 162
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LK R F ++KG +G F S++ L + RVG V+KK G AV RN+++
Sbjct: 60 RLLSLKGDRAFQRLRKGRAGRGRFVSVKWLPAPEA----RVGIVVSKKVGKAVVRNKVK- 114
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + +L+A +A F EL V +R++
Sbjct: 115 ---RRLREILRRLHLPKAHILLVASPEAREAGFAELFQDVVRALRKS 158
>gi|314961661|gb|EFT05762.1| ribonuclease P [Propionibacterium acnes HL002PA2]
gi|327333671|gb|EGE75388.1| ribonuclease P protein component [Propionibacterium acnes HL096PA3]
Length = 95
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 17 RSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 75
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 76 P-DRVAKDLDGAWHQALRKLR 95
>gi|262277965|ref|ZP_06055758.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
gi|262225068|gb|EEY75527.1| putative ribonuclease P protein component (RNaseP protein) (RNaseP
protein) (Protein C5) [alpha proteobacterium HIMB114]
Length = 117
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRV--GFTVTKKQGCAVERNRMR 61
L ++F V G+ F++ N NNS+ + KK G AV+RNRMR
Sbjct: 7 FHSLSGSKEFKEVLSGKKISSNLFTIFYKNKNNSDQNKEILLSCVAAKKLGNAVKRNRMR 66
Query: 62 RRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRLK A R + K Y + AK F+ + N ++R
Sbjct: 67 RRLKMATRKAIIEIKNNFKKKFKYAIFAKPKIYDENFQNIVNELTSKLRSI 117
>gi|238899056|ref|YP_002924738.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|259494110|sp|C4K7P7|RNPA_HAMD5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229466816|gb|ACQ68590.1| RNase P, protein C5 component, processes tRNA, 4.5S RNA [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 115
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L F V + R + VL N PR+GF ++KK A RNR+
Sbjct: 8 PRELRLLTPHSFGFVFEKPQRASTEQ-ITVLARINDLKHPRIGFAISKKNVKHAHHRNRI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R +E+ RL +L D++++AK+ + + L RR
Sbjct: 67 KRLTRESFRLHQHFLLP--MDFIILAKKGVDKLDNQVLNAVLERLWRR 112
>gi|89897985|ref|YP_515095.1| ribonuclease P [Chlamydophila felis Fe/C-56]
gi|123483805|sp|Q255T8|RNPA_CHLFF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|89331357|dbj|BAE80950.1| ribonuclease P protein component [Chlamydophila felis Fe/C-56]
Length = 139
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KR+QF + + + + + ++G TV+KK G A +RN
Sbjct: 6 LPKRARVLKRKQFLYISRTGSHCQGSQVIFQVAPSKYPGCCKLGITVSKKFGKAHKRNYF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + V++ K F++L F +++
Sbjct: 66 KRLVREAFRQKRHSL--PACQIVVMPKNK-QQPRFRDLLQDFSQQI 108
>gi|293400060|ref|ZP_06644206.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306460|gb|EFE47703.1| ribonuclease P protein component [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 108
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +K R+FA + + P F + V + RVG +V KK G AV RN+
Sbjct: 1 MKKEFRVKDTREFAEIMNYKKFYTCPSFVIYVKPRKEDHA--RVGISVGKKMGKAVIRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ V+ D +++ + + +++ K
Sbjct: 59 IKRQVRSMVQDIYT--FDENFDTIILVRVKYHEENYINNKKLLERLIKKVK 107
>gi|71083174|ref|YP_265893.1| ribonuclease P protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062287|gb|AAZ21290.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 114
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKKQGC-AVERNR 59
S I L K F + K + + +L + N + F KK AV+RN+
Sbjct: 3 SKIVALSKNEDFKNLLKKKKISNKYITLFFGPLADKDNKKLNISFVAKKKLIRSAVKRNK 62
Query: 60 MRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ + + V + + Y++IAK L + + + + + + K
Sbjct: 63 IKRRLRNIMNEAIKKVSINFNYSYLVIAKITMLNNEYAIIKDTLFQDIEKIK 114
>gi|308185211|ref|YP_003929344.1| ribonuclease P protein component [Helicobacter pylori SJM180]
gi|308061131|gb|ADO03027.1| ribonuclease P protein component [Helicobacter pylori SJM180]
Length = 161
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDKKVLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHVALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|91762397|ref|ZP_01264362.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718199|gb|EAS84849.1| Bacterial ribonuclease P protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 114
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKKQGC-AVERNR 59
S I L K F + K + + +L + N + F KK AV+RN+
Sbjct: 3 SKIVALSKNEDFKNLLKKKKISNKYITLFFGPLVDKDNRKLNISFVAKKKLIRGAVKRNK 62
Query: 60 MRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++RRL+ + + + + + Y++IAK L + + + + + + K
Sbjct: 63 VKRRLRNIINEAVKKLSINFNYSYLVIAKITMLNNEYAIIKDTLFQDIEKIK 114
>gi|326797442|ref|YP_004315262.1| ribonuclease P protein component [Marinomonas mediterranea MMB-1]
gi|326548206|gb|ADZ93426.1| Ribonuclease P protein component [Marinomonas mediterranea MMB-1]
Length = 132
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L + V K +L + S R+G V K + AV RNR++R
Sbjct: 10 NRLLNAGDYQSVFNNTSFKVFAGEFLILAHKKSGTDARLGLIVAKKNEKRAVGRNRIKRV 69
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++E+ R + + D V +A++ + +EL + +
Sbjct: 70 VRESFRHH--KLKLNDLDIVFLARQGIKEVDNQELHKRLEKAWAQL 113
>gi|225077256|ref|ZP_03720455.1| hypothetical protein NEIFLAOT_02311 [Neisseria flavescens
NRL30031/H210]
gi|224951400|gb|EEG32609.1| hypothetical protein NEIFLAOT_02311 [Neisseria flavescens
NRL30031/H210]
Length = 113
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L K F+ V + R+ + +N+ PR+G V+KK A ERN M
Sbjct: 6 SKQYRLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHERNYM 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R +++ RL + HD+V+ ++ E N + +++
Sbjct: 66 KRVIRDWFRLNQHQL--PPHDFVVRVRQAFNRETAPEARNQLAQLMKK 111
>gi|269216522|ref|ZP_06160376.1| ribonuclease P protein component [Slackia exigua ATCC 700122]
gi|269130051|gb|EEZ61133.1| ribonuclease P protein component [Slackia exigua ATCC 700122]
Length = 114
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
+G+ + +L VLN+ + RV KK G AV RN +RRL+ +
Sbjct: 13 LFFSQGKRINTRYITLLVLNHTQHDHSGRVAVIAGKKIGGAVVRNAAKRRLRAVIHDIGG 72
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+G D +AK L P+ ++ + +
Sbjct: 73 PW--NGVDVAFMAKPLLLNAPYDKVVDACFHALE 104
>gi|254483185|ref|ZP_05096418.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2148]
gi|214036556|gb|EEB77230.1| ribonuclease P protein component [marine gamma proteobacterium
HTCC2148]
Length = 127
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L ++ V G + L +L ++ R+G + KK A +RNR++
Sbjct: 9 KARRLLNAEDYSRVFDGAEARASHKHLLLLARTSTRPGHRLGLVIAKKNIRLAAQRNRIK 68
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R +E R+ + + D +L+A+R + + L ++ ++
Sbjct: 69 RVAREVFRVLPDS--EPSLDVILLARRGLDQLDNEALSTILRQQWQKL 114
>gi|317126739|ref|YP_004100851.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
gi|315590827|gb|ADU50124.1| ribonuclease P protein component [Intrasporangium calvum DSM 43043]
Length = 90
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
PRVGF V+K G AV RN +RRL+ AV G+ G D V+ A A ++EL
Sbjct: 13 PPRVGFVVSKAVGNAVTRNLTKRRLRAAVATQLSGI-PLGVDVVVRANPSAALASYQELA 71
Query: 100 NHFVERVRRNKRSYYSGKN 118
+ ++ R RS +
Sbjct: 72 DSIALQLDRVCRSVSKASS 90
>gi|314922675|gb|EFS86506.1| ribonuclease P [Propionibacterium acnes HL001PA1]
Length = 95
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 17 RSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 75
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 76 P-DRVAKDLDGAWHQALRKLR 95
>gi|284799978|ref|ZP_05985358.2| ribonuclease P protein component [Neisseria subflava NJ9703]
gi|319639362|ref|ZP_07994113.1| ribonuclease P protein component [Neisseria mucosa C102]
gi|284796250|gb|EFC51597.1| ribonuclease P protein component [Neisseria subflava NJ9703]
gi|317399546|gb|EFV80216.1| ribonuclease P protein component [Neisseria mucosa C102]
Length = 113
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L K F+ V + R+ + +N+ PR+G V+KK A +RN M
Sbjct: 6 SKQYRLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHDRNYM 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R +++ RL + HD+V+ ++ E N + +++
Sbjct: 66 KRVIRDWFRLNQHQL--PPHDFVVRVRQAFNRETAPEARNQLAQLMKK 111
>gi|332654816|ref|ZP_08420558.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
gi|332516159|gb|EGJ45767.1| ribonuclease P protein component [Ruminococcaceae bacterium D16]
Length = 121
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK+ +F + KG P+F++ + + R+G T K G AV+RNR
Sbjct: 1 MKHTIALKQNHEFRRLYNKGRSAVSPYFAIYCRK--TNRPISRLGITTGVKLGNAVKRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
RRR++E R + G+D V++A+ ++ +++L F++ +R+ +
Sbjct: 59 ARRRIRELYRTNEARLA-PGYDIVVVARTRVIYGRYRDLERSFLQLMRKLELVRPQEGAK 117
Query: 120 SR 121
S
Sbjct: 118 SE 119
>gi|258544270|ref|ZP_05704504.1| ribonuclease P protein component [Cardiobacterium hominis ATCC
15826]
gi|258520508|gb|EEV89367.1| ribonuclease P protein component [Cardiobacterium hominis ATCC
15826]
Length = 118
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Query: 2 SNICILKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L +R F V + F++ ++ A ERNR
Sbjct: 6 PRTARLTQRADFDRVFQAPERKSSDRCFTVLGRCRLQDGAARLGLVIAKRQIRRAHERNR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R ++E+ R + D ++IA+ A + +R
Sbjct: 66 IKRLVRESFRQ-LPARERAALDIIVIARHAAEEHDNAAIARALARHWQRL 114
>gi|92119161|ref|YP_578890.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
gi|91802055|gb|ABE64430.1| ribonuclease P protein component [Nitrobacter hamburgensis X14]
Length = 111
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L++R F G P F ++ N + R+GFTVTKK G A ERNR+RRRL+
Sbjct: 3 RLRQRAAFLAAANGLRVNAPAFVVQNRRR-NDDGPIRIGFTVTKKNGTATERNRIRRRLR 61
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
E V+ ++ DYV+I +R AL F + + R R
Sbjct: 62 ELVKRVDAVSMRPHSDYVVIGRRAALDRGFAVMLDDLRSAFNRLDR 107
>gi|328956380|ref|YP_004373713.1| ribonuclease P protein component [Coriobacterium glomerans PW2]
gi|328456704|gb|AEB07898.1| ribonuclease P protein component [Coriobacterium glomerans PW2]
Length = 110
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ F V +G P + + ++ RV F K+ GCA RNR +R +
Sbjct: 3 TIASHSDFERVFSRGYRLNHPLMRMVICRLDDEGAPGRVAFAAAKRLGCAPRRNRAKRVM 62
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ R G G D +L A R +L + R
Sbjct: 63 RACARNL--GFPVQGFDVILFATRATGSASQADLTSALTSLCGRA 105
>gi|297621042|ref|YP_003709179.1| Ribonuclease P protein component [Waddlia chondrophila WSU 86-1044]
gi|297376343|gb|ADI38173.1| Ribonuclease P protein component [Waddlia chondrophila WSU 86-1044]
Length = 115
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S L K+ QF V + R F + V + N R+G TV++K G AV+RNR +
Sbjct: 6 SKQSRLLKKYQFLRVVRYGKRHAGNFLV-VESVKNRLNRSRLGITVSRKFGKAVQRNRFK 64
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R ++E R + G D + + A + F+ + ++
Sbjct: 65 RLIREGFRQ-LGSLRNSGIDIHVKPRSKAKDVDFEMMRTELSALLK 109
>gi|313765028|gb|EFS36392.1| ribonuclease P protein component [Propionibacterium acnes HL013PA1]
Length = 141
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 63 RSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 121
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 122 P-DRVAKDLDGAWHQALRKLR 141
>gi|317014861|gb|ADU82297.1| ribonuclease P protein component [Helicobacter pylori Gambia94/24]
Length = 161
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V A L G V + K D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGLTLVFVPKSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNK 110
+ K
Sbjct: 136 LTSIK 140
>gi|313112580|ref|ZP_07798241.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625102|gb|EFQ08396.1| ribonuclease P protein component [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 167
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+++ +F V +G+ P + VL + RVG T TKK G AV+RNR RR +K
Sbjct: 37 IRRNSEFGRVYARGKSYVNPGLVMYVLKTRSKK--TRVGLTATKKIGHAVQRNRARRVMK 94
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
A+ + + G+D + +A+ + +L + +
Sbjct: 95 AAIDEHLDYNI-GGYDLIFVARGMTPRLKSWQLSSVVAKLFA 135
>gi|315086611|gb|EFT58587.1| ribonuclease P protein component [Propionibacterium acnes HL002PA3]
Length = 141
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 63 RSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 121
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 122 P-DRVAKDLDGAWHQALRKLR 141
>gi|262204661|ref|YP_003275869.1| ribonuclease P protein component [Gordonia bronchialis DSM 43247]
gi|262088008|gb|ACY23976.1| ribonuclease P protein component [Gordonia bronchialis DSM 43247]
Length = 132
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 36/117 (30%), Gaps = 14/117 (11%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNN-------------SNLLPRVGFTVTKK 50
+ + F+ ++ G F L + P +G V+K
Sbjct: 6 HRISRGSDFSRTLRTGVRVSARDFVLHASPVPPVWPDDSRIRRDVALHGGPWLGLIVSKA 65
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
G AV R+ + RRL+ A + V+ A R A EL R
Sbjct: 66 VGPAVTRHAVARRLRAAFTATMDSCPSPETYVVVRAHRSAAQRSSVELAEQLEAAWR 122
>gi|297565965|ref|YP_003684937.1| ribonuclease P protein component [Meiothermus silvanus DSM 9946]
gi|296850414|gb|ADH63429.1| ribonuclease P protein component [Meiothermus silvanus DSM 9946]
Length = 98
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
+ RVG V+KK G AV RN++R +R + + V++A+ +A
Sbjct: 22 PSPPYKAEVRVGIVVSKKVGKAVVRNKVR----RRLREILRRMHLPSCELVVVAQPEAAG 77
Query: 93 IPFKELCNHFVERVRRN 109
F EL + +++
Sbjct: 78 ASFAELLRDLTQALKKA 94
>gi|312136224|ref|YP_004003562.1| ribonuclease p protein component [Caldicellulosiruptor owensensis
OL]
gi|311776275|gb|ADQ05762.1| ribonuclease P protein component [Caldicellulosiruptor owensensis
OL]
Length = 119
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+ LKK +F +++G + L N + R G +++ K G A RNR
Sbjct: 1 MNKYVALKKNEEFEACIRRGRFAAQEKVVVYSLKN--GLTVSRFGISMSAKLGKATARNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKR------DALFIPFKELCNHFVERVRRNK 110
+R ++ + + + K G D V+IA+R A I K+ +R +
Sbjct: 59 FKRVVRAWILENIDKI-KQGFDIVVIARRIKDDKIKAREIHLKDFKEDLERAFKRLR 114
>gi|224437879|ref|ZP_03658826.1| ribonuclease P [Helicobacter cinaedi CCUG 18818]
gi|313144328|ref|ZP_07806521.1| ribonuclease P protein [Helicobacter cinaedi CCUG 18818]
gi|313129359|gb|EFR46976.1| ribonuclease P protein [Helicobacter cinaedi CCUG 18818]
Length = 147
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 21/139 (15%)
Query: 3 NICILKKRRQFALVKKG-ELRKGPFFSLEVLN-----------------NNNSNLLPRVG 44
+ LK + +F + K + F L L ++ N VG
Sbjct: 2 RLDSLKNKTEFDFIYKNAQRFFHKNFVLYALQISSIKPNNFRTQKFVDSLSSHNAEVYVG 61
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++++K G A RN ++RRLK + + + +V++A+ + F L +
Sbjct: 62 LSISRKVGKACVRNLLKRRLKAIMYENRTKL--QDYIFVIVARESIILADFATLQRDILF 119
Query: 105 RVRR-NKRSYYSGKNFSRK 122
+ S+K
Sbjct: 120 ACSKVIHSKIIQSGAKSQK 138
>gi|269977739|ref|ZP_06184699.1| ribonuclease P protein component [Mobiluncus mulieris 28-1]
gi|306817499|ref|ZP_07451243.1| ribonuclease P protein component [Mobiluncus mulieris ATCC 35239]
gi|269934043|gb|EEZ90617.1| ribonuclease P protein component [Mobiluncus mulieris 28-1]
gi|304649723|gb|EFM47004.1| ribonuclease P protein component [Mobiluncus mulieris ATCC 35239]
Length = 117
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + L K ++ LV + R+ + +S+ R+G V KK A RN
Sbjct: 2 LAKVNRLVKATEYRLVMRRGQRRTQRHFIGFQYWQDSSYPARIGLVVPKKSVRLATRRNL 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++RRL+ AVR G V +A+ A + ++EL + + +R
Sbjct: 62 VKRRLRGAVREHLGE-FPPGSLTVFLARPAADKVAYRELDSQLESLIAGWQRPQQK 116
>gi|109946794|ref|YP_664022.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
gi|123173592|sp|Q17ZA3|RNPA_HELAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|109714015|emb|CAJ99023.1| ribonuclease P protein component [Helicobacter acinonychis str.
Sheeba]
Length = 153
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR---------------VGFTVTK 49
LK + +F V +G + FFSL VL+ + + +G +V+K
Sbjct: 18 SLKNKSEFDRVYQRGFKKHNSFFSLFVLDASKEPSHFKNPFFCRLKDTEKSCLLGLSVSK 77
Query: 50 KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
K G AV+RN ++RRL+ V L G V + K+D + F L HF+E +
Sbjct: 78 KVGNAVKRNLIKRRLRSLV--LKHASLCQGFALVFVPKKDCERLDFLTLEKHFLEMLISI 135
Query: 110 K 110
K
Sbjct: 136 K 136
>gi|291319995|ref|YP_003515253.1| ribonuclease P protein component [Mycoplasma agalactiae]
gi|290752324|emb|CBH40295.1| Ribonuclease P protein component [Mycoplasma agalactiae]
Length = 107
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + NS ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQFANNFLVLYYKPANS---FKLGITVPKKFCNAVLRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R++K + V VLI +++ L F + + + +
Sbjct: 58 KRQVKAIIHKL--NVYDFKFHCVLILRKEFLNEKFDAKFSATQKLFNKLR 105
>gi|282853037|ref|ZP_06262374.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
gi|282582490|gb|EFB87870.1| putative ribonuclease P protein component [Propionibacterium acnes
J139]
Length = 148
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 70 RSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 128
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 129 P-DRVAKDLDGAWHQALRKLR 148
>gi|148654187|ref|YP_001281280.1| ribonuclease P protein component [Psychrobacter sp. PRwf-1]
gi|229470482|sp|A5WI39|RNPA_PSYWF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|148573271|gb|ABQ95330.1| ribonuclease P protein component [Psychrobacter sp. PRwf-1]
Length = 130
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 5/117 (4%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L K +F V F ++++ + T KK AV RN
Sbjct: 7 PKAKRLLKPAEFKPVFNQPLFKVHQTHFMAFAYDSDHLQARLGMAIT-KKKIPTAVARNT 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++R ++E R + D V I K+ + +++ + + +
Sbjct: 66 IKRIIREQFRHTHAQL--PALDVVFILKKSTKALSNEQMRQEISDILSKVISKQRRA 120
>gi|292669290|ref|ZP_06602716.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
gi|292649131|gb|EFF67103.1| ribonuclease P protein component [Selenomonas noxia ATCC 43541]
Length = 130
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ I+K+R F V G + G L VL + + +VGF KK GCA R+R
Sbjct: 8 LPRAKIIKRRSDFQNVYQNGAVVPGRGMILYVLRDP--RVAGKVGFAAGKKLGCAAVRSR 65
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R L+EA R + + +LI + ++ RR K
Sbjct: 66 TKRLLREAYRHMQHEL-RTDVGILLIGRAGLAACKMQDAAAELRRLARRAK 115
>gi|32265614|ref|NP_859646.1| ribonuclease P [Helicobacter hepaticus ATCC 51449]
gi|48474805|sp|Q7VJX7|RNPA_HELHP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|32261662|gb|AAP76712.1| ribonuclease P [Helicobacter hepaticus ATCC 51449]
Length = 146
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 21/138 (15%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLN------------------NNNSNLLP 41
M+ + LK + +F V + + F L +L + N
Sbjct: 1 MARLDTLKNKAEFDFVYRNAQRFFHKDFVLYMLKFSSIRESYPLRQQRIFQSIQSRNAKL 60
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+G +V++K G A RN ++RR+K ++++ K + F L N+
Sbjct: 61 HLGLSVSRKIGKAYMRNLIKRRIKAIAYENCADF--KDVIFLIVVKEGIREMDFATLKNN 118
Query: 102 FVERVRRNKRSYYSGKNF 119
+ + + +
Sbjct: 119 LLASFIKMYNAKKTRNIR 136
>gi|207092097|ref|ZP_03239884.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
HPKX_438_AG0C1]
Length = 161
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 22/131 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNPFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ A L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLTSKHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSG 116
+ K
Sbjct: 136 LTSIKNYMNKA 146
>gi|154249721|ref|YP_001410546.1| ribonuclease P protein component [Fervidobacterium nodosum Rt17-B1]
gi|154153657|gb|ABS60889.1| ribonuclease P protein component [Fervidobacterium nodosum Rt17-B1]
Length = 129
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK RR L+ K G+ + +F + N R+ +V KK G A RN++
Sbjct: 13 RKKERLKLRRDITLLFKEGKSVQNEYFVIIYRKN--GLDYSRIAISVKKKFGKANRRNKL 70
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRN 109
RR ++E R + K G D+++IA+++ ++ +C+ + R
Sbjct: 71 RRWVRECFRTNKYNISK-GFDFLIIARKNLSEKFDKADYRSICSSLLNVFERI 122
>gi|313900922|ref|ZP_07834412.1| ribonuclease P protein component [Clostridium sp. HGF2]
gi|312954342|gb|EFR36020.1| ribonuclease P protein component [Clostridium sp. HGF2]
Length = 108
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M +KK ++FA + + P F++ V + RVG +V KK G AV RN+
Sbjct: 1 MKKEYRVKKSQEFAEIMNYKKFYTCPSFAIYVKPRKEDHA--RVGISVGKKMGKAVVRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++R+++ V+ + D +++ + + V++ K
Sbjct: 59 IKRQVRMMVQDIYS--FEEKFDTIILVRVKYHEENYINNKKLLERLVKKVK 107
>gi|227496607|ref|ZP_03926885.1| ribonuclease P [Actinomyces urogenitalis DSM 15434]
gi|226833887|gb|EEH66270.1| ribonuclease P [Actinomyces urogenitalis DSM 15434]
Length = 117
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 4/116 (3%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPR-VGFTV-TKKQGCAVERNRMRRR 63
+ + F V+ G + + P VG V K+ A RNR++RR
Sbjct: 1 MLRSEDFTTAVRSGARAGSRRLVIHYSAGEAGDTTPALVGVVVPKKQVAKATHRNRIKRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
++ +R G+ + G VL A +EL + R + +
Sbjct: 61 VRALMRDRVAGL-EPGAKIVLRGLAGADGATSQELAADLDRLLERGRSGKPRRQGR 115
>gi|88860618|ref|ZP_01135255.1| Ribonuclease P protein component [Pseudoalteromonas tunicata D2]
gi|88817213|gb|EAR27031.1| Ribonuclease P protein component [Pseudoalteromonas tunicata D2]
Length = 135
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L ++ V F+L L N PR+G TV KK+ A +RNR++R
Sbjct: 11 RLLTPSHYSKVFNEPVRAATENFTL--LAKPNDVNKPRLGLTVAKKRVKQANQRNRIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+E+ RL + D VL+ K L + + G
Sbjct: 69 ARESFRLSQHKLD--NIDIVLMVKDGCALQDNTLLRKQLDKLWLKINERCKPGAPKP 123
>gi|253997711|ref|YP_003049775.1| ribonuclease P [Methylotenera mobilis JLW8]
gi|253984390|gb|ACT49248.1| ribonuclease P protein component [Methylotenera mobilis JLW8]
Length = 136
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
+ L K +F+ V R F N+ PR+G V KK AV RN M
Sbjct: 7 TKQAKLIKTDEFSSVFNFRKRIFAQFLAVHYQ-PNALARPRLGLVVGKKTAKSAVHRNYM 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
RR L+E RL + + D V+ ++ F + F +++ +
Sbjct: 66 RRVLREFFRLHQQSINP--LDLVVRVQKKFNKKDFLAVVQEFDSLLKKVNQRTS 117
>gi|317011579|gb|ADU85326.1| ribonuclease P protein component [Helicobacter pylori SouthAfrica7]
Length = 161
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 22/125 (17%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + +G
Sbjct: 18 SLKNKSEFDRVYRKGFKKHNPFFSLFVLDLPKEPPKEKESLKDPLSYRLKDKETLFLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G A +RN ++RRL+ A L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAAKRNLIKRRLRSLASRHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLET 135
Query: 106 VRRNK 110
+ K
Sbjct: 136 LTSIK 140
>gi|317509425|ref|ZP_07967043.1| ribonuclease P [Segniliparus rugosus ATCC BAA-974]
gi|316252254|gb|EFV11706.1| ribonuclease P [Segniliparus rugosus ATCC BAA-974]
Length = 142
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 11/115 (9%)
Query: 5 CILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRV---------GFTVTKKQGCA 54
++ R F+ V+ G + +L + + RV G V K+ G +
Sbjct: 6 NRMRSRLDFSETVRCGRRTGRRDMVVHLLTRDFGDAQGRVVAAPCASKAGLIVGKQVGGS 65
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
V R ++ R+L+ A+R + V+ A + E +R+
Sbjct: 66 VTRKKVSRKLRSALRSVLPEL-PPSSLLVVRALPGSAQTQVAEFEGQLRSALRKL 119
>gi|114327388|ref|YP_744545.1| ribonuclease P protein component [Granulibacter bethesdensis
CGDNIH1]
gi|114315562|gb|ABI61622.1| ribonuclease P protein component [Granulibacter bethesdensis
CGDNIH1]
Length = 129
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 3 NICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LK+R +F V KG L+ L ++ R+G+TVTKK G AV RNR R
Sbjct: 14 REKRLKRRAEFLRVASKGRKAAVHGLVLQALPAQAADAPLRIGYTVTKKVGNAVVRNRTR 73
Query: 62 RRLKEAVRLCAEGVLKHG-----HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRL+EA RL A + G HD VLI + PF L + + +
Sbjct: 74 RRLREAARLVAREYDQAGTPLSAHDLVLIGRDSTRGRPFDSLLDDLRRALAKA 126
>gi|297539960|ref|YP_003675729.1| ribonuclease P protein component [Methylotenera sp. 301]
gi|297259307|gb|ADI31152.1| ribonuclease P protein component [Methylotenera sp. 301]
Length = 132
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ + K F+ V R + + N+ R+G V KK AV RN
Sbjct: 7 LVKQAKMIKTDDFSSVFNFRKRFSLKYLVMHY--QPNTLQRARLGLVVGKKTAKLAVSRN 64
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
MRR L+E RL + D ++ ++ + F ++ F + + +
Sbjct: 65 YMRRVLREFFRLNQHDI--CHVDLIIRVQKKFDKVDFIQIKQEFDSLIYKLNQR 116
>gi|307638099|gb|ADN80549.1| Ribonuclease P protein component [Helicobacter pylori 908]
gi|325996700|gb|ADZ52105.1| Ribonuclease P protein component [Helicobacter pylori 2018]
gi|325998292|gb|ADZ50500.1| putative ribonuclease P protein component [Helicobacter pylori
2017]
Length = 161
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + PFFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYRKGFKKHNPFFSLFVLDLSKEPPKEKEGFKDPLSCRLKDRNTLCLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ V A L G V + K D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSLVTRHAA--LCQGLALVFVPKSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNK 110
+ K
Sbjct: 136 LTSIK 140
>gi|153877060|ref|ZP_02004059.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
gi|152066476|gb|EDN65941.1| Bacterial ribonuclease P protein [Beggiatoa sp. PS]
Length = 129
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 7 LKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L ++ V + ++ L N+ + R+G +TKK+ AV+RNR++R +
Sbjct: 13 LLTAAEYKYVFNKPYKSADRYLTV--LARLNAQDVARLGLAITKKRAKLAVDRNRIKRLI 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E+ R ++ G D V++AK + L + +
Sbjct: 71 RESFRHHQSDLV--GLDCVVLAKGGTKTTDNRTLLQSLAKHWQNL 113
>gi|194246771|ref|YP_002004410.1| Ribonuclease P [Candidatus Phytoplasma mali]
gi|193807128|emb|CAP18566.1| Ribonuclease P [Candidatus Phytoplasma mali]
Length = 112
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
+ PFF L N N + ++ KK G A ERN ++RRL+ + ++
Sbjct: 21 KSIGNPFFVLYYSKNKNQTHF-KFALSIGKKYGKAYERNLIKRRLRMIIHE-FHILIDFK 78
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+VL+ K A + F+++ F ++++
Sbjct: 79 ISFVLVIKPKAKNLTFQQIKEDFFILLKKS 108
>gi|15618843|ref|NP_225129.1| ribonuclease P [Chlamydophila pneumoniae CWL029]
gi|15836467|ref|NP_300991.1| ribonuclease P [Chlamydophila pneumoniae J138]
gi|16752097|ref|NP_445464.1| ribonuclease P [Chlamydophila pneumoniae AR39]
gi|33242299|ref|NP_877240.1| ribonuclease P [Chlamydophila pneumoniae TW-183]
gi|9789806|sp|Q9Z6X2|RNPA_CHLPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|4377257|gb|AAD19072.1| Ribonuclease P Protein Component [Chlamydophila pneumoniae CWL029]
gi|8163525|gb|AAF73717.1| ribonuclease P protein component [Chlamydophila pneumoniae AR39]
gi|8979308|dbj|BAA99142.1| ribonuclease P protein component [Chlamydophila pneumoniae J138]
gi|33236810|gb|AAP98897.1| ribonuclease P protein component [Chlamydophila pneumoniae TW-183]
Length = 139
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ + KR+QF + + + + + R+G TV+KK G A ERN
Sbjct: 6 LPKQSRVLKRKQFLYITRSGFCCRGSQATFYVVPSRHPGTCRMGITVSKKFGKAHERNSF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++E R + V+ K F +L F+ ++
Sbjct: 66 KRVVREVFRHVRHQL--PNCQIVVFPKGHKQRPVFSKLLQDFINQI 109
>gi|330993391|ref|ZP_08317326.1| Ribonuclease P protein component [Gluconacetobacter sp. SXCC-1]
gi|329759421|gb|EGG75930.1| Ribonuclease P protein component [Gluconacetobacter sp. SXCC-1]
Length = 116
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 3 NICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LKKR +F V KG P L+ L ++ R GFTVTKK G +V RNR R
Sbjct: 4 QSTRLKKRAEFLRVAAKGRKAPAPGLVLQALERGDTEAA-RYGFTVTKKVGNSVVRNRAR 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
RRL+E VRL G D V+I + F L + + +R+ S
Sbjct: 63 RRLREVVRLLGREKALRGVDIVVIGRSGTCGRRFDALMGDYRKALRKAGVKEES 116
>gi|225020860|ref|ZP_03710052.1| hypothetical protein CORMATOL_00868 [Corynebacterium matruchotii
ATCC 33806]
gi|224946342|gb|EEG27551.1| hypothetical protein CORMATOL_00868 [Corynebacterium matruchotii
ATCC 33806]
Length = 85
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ PR G V+K G AV R+ + R+L+ +R + + G V+ A A
Sbjct: 8 RDVLTPKPRCGLVVSKAVGNAVTRHAVSRKLRAIIRPLFDDL-PPGTLIVIRALPAAAHA 66
Query: 94 PFKELCNHFVERVRRNKRS 112
+EL + + + +
Sbjct: 67 NSEELSHDVQRALAKIRER 85
>gi|261856986|ref|YP_003264269.1| ribonuclease P [Halothiobacillus neapolitanus c2]
gi|261837455|gb|ACX97222.1| ribonuclease P protein component [Halothiobacillus neapolitanus c2]
Length = 123
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 6/110 (5%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
L++ ++ + G+ L + N PR+G + K+Q A ERNR++R
Sbjct: 14 VRLRRPDEYKRTLTSGKRVHCE--LLMAVVTPNQGANPRLGLAIAKRQTRLAHERNRVKR 71
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++ R D V++AK + EL + +
Sbjct: 72 IARDHFRRHQAQW--PSFDCVIMAKAGIEKVSNPELQIMMKQLFEKVAAR 119
>gi|241659449|emb|CAZ65701.1| Ribonuclease P protein component [Mycoplasma conjunctivae]
Length = 114
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + I+ K QF + + L N +G ++ KK +V+RN
Sbjct: 1 MYKLQIVSKNWQFQEIIDSKQQIVTKNLILYYKKFTNFE----IGISIPKKFANSVKRNF 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+R++K +R + +LI ++ L + F + + ++
Sbjct: 57 YKRQIKNVLRKLIKNYDLPNFRIILITRKSFLDLKFVQKEEKIQKIFEELLKNVKQAS 114
>gi|88705402|ref|ZP_01103113.1| Bacterial ribonuclease P protein [Congregibacter litoralis KT71]
gi|88700492|gb|EAQ97600.1| Bacterial ribonuclease P protein [Congregibacter litoralis KT71]
Length = 119
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 3/106 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L + V K K L +L N R+G V K AV+RN ++R
Sbjct: 9 QRLLTADDYRQVFKAPDHKAGQKELLLLARQNDLTCHRLGLAVAKKHVPTAVKRNVIKRL 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E R + D V++ + A + + V++ R
Sbjct: 69 TREHFRALSPS--TPSFDIVVLTRPGARDATATRIKDALVKQFTRL 112
>gi|308234062|ref|ZP_07664799.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|328943459|ref|ZP_08240924.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
gi|327491428|gb|EGF23202.1| ribonuclease P protein component [Atopobium vaginae DSM 15829]
Length = 105
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ +K ++ FA+V K G+ P + + + RV + KK GCA RNR +R
Sbjct: 1 MQTIKSKQDFAMVFKNGKRLFHPAVRIVFIPST---QTTRVAYCAPKKIGCAPLRNRCKR 57
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+ AVR + D ++ A EL + +
Sbjct: 58 LLRAAVRDI--PYVPQNFDVIMFATHKTKAYSSCELSKIVNKLLHSI 102
>gi|58040257|ref|YP_192221.1| ribonuclease P protein component [Gluconobacter oxydans 621H]
gi|67461236|sp|Q5FPY1|RNPA_GLUOX RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|58002671|gb|AAW61565.1| Ribonuclease P protein component [Gluconobacter oxydans 621H]
Length = 124
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+KKR QF V KG P +++L +++ RVGFTVTKK G +V RNR RRRL+
Sbjct: 1 MKKRPQFLRVAGKGRKVATPGMVVQILP-DDTATETRVGFTVTKKVGNSVIRNRTRRRLR 59
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
EA+RL A D+VLI + F L + + +R+
Sbjct: 60 EALRLVAREDGLPSGDFVLIGRDKTRERDFSLLKDDLRQALRK 102
>gi|241759423|ref|ZP_04757527.1| ribonuclease P protein component [Neisseria flavescens SK114]
gi|241320205|gb|EER56538.1| ribonuclease P protein component [Neisseria flavescens SK114]
Length = 113
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
S L K F+ V + R+ + +N+ PR+G V+KK A +RN M
Sbjct: 6 SKQYRLLKTDDFSSVFALKNRRSRDLLQVSQSADNALGHPRLGLVVSKKTAKRAHDRNYM 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R +++ RL + HD+V+ ++ E + + +++
Sbjct: 66 KRVIRDWFRLNQHQLSP--HDFVVRVRQAFNRETAPEARDQLAQLMKK 111
>gi|221633071|ref|YP_002522296.1| ribonuclease P protein component [Thermomicrobium roseum DSM 5159]
gi|221157186|gb|ACM06313.1| ribonuclease P protein component [Thermomicrobium roseum DSM 5159]
Length = 129
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 2 SNICILKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L++ +F V++ + N R GF + ++ G AV RN++
Sbjct: 3 ARRYRLRRSSEFERVRRRGRSVSNRLLVVSFAANQLGEN--RYGFAIGRRVGKAVRRNKV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF--IPFKELCNHFVERVRRN 109
+R L+EAVR + + G+D V +A+ + + + E + R
Sbjct: 61 KRWLREAVRRLHPRL-RQGYDIVFVARGALADPAMTYHRVVAAVEELLDRA 110
>gi|315638578|ref|ZP_07893752.1| ribonuclease P protein component [Campylobacter upsaliensis JV21]
gi|315481202|gb|EFU71832.1| ribonuclease P protein component [Campylobacter upsaliensis JV21]
Length = 107
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V K G+ L L N +KK G AV RNR +R L+
Sbjct: 11 EFVAVYKSGKKWFCDGLILFYLPANERKR----AVVASKKVGKAVVRNRAKRVLRALFAK 66
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ YVL+AK D F +L ++R +
Sbjct: 67 VENDLKNGK--YVLVAKADLNEFSFLKLEKSLKWGLKRIQ 104
>gi|77166534|ref|YP_345059.1| ribonuclease P protein [Nitrosococcus oceani ATCC 19707]
gi|254436115|ref|ZP_05049622.1| ribonuclease P protein component [Nitrosococcus oceani AFC27]
gi|123593185|sp|Q3J6L7|RNPA_NITOC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76884848|gb|ABA59529.1| ribonuclease P protein component [Nitrosococcus oceani ATCC 19707]
gi|207089226|gb|EDZ66498.1| ribonuclease P protein component [Nitrosococcus oceani AFC27]
Length = 119
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERNR 59
+ + L F + GE F++ ++NS PR+G + K AV+RNR
Sbjct: 7 TRLMRLVDPGDFKQIFAAGERVSSKAFTVLY--HSNSLEYPRLGMAIPRKHFSRAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R ++E+ R + + G D V+++K P +L +
Sbjct: 65 IKRLVRESFRQRQQVLG--GRDLVVLSKPGINRHPNSDLLRCLERQW 109
>gi|91205682|ref|YP_538037.1| ribonuclease P [Rickettsia bellii RML369-C]
gi|157826860|ref|YP_001495924.1| ribonuclease P [Rickettsia bellii OSU 85-389]
gi|122425507|sp|Q1RI66|RNPA_RICBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226736|sp|A8GVL0|RNPA_RICB8 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91069226|gb|ABE04948.1| Ribonuclease P [Rickettsia bellii RML369-C]
gi|157802164|gb|ABV78887.1| ribonuclease P [Rickettsia bellii OSU 85-389]
Length = 120
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNN-----NNSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + N S +G V+KK AV
Sbjct: 3 ITSLKNQKEFELINKLGKKFHEKYFILVIAKNIPKIFLESKYNIFLGIKVSKKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR+K +RL ++I ++ F L + + +
Sbjct: 63 RNKIKRRIKHLIRLICNNSNLKKLAMIIIPRKGFDTADFSVLNHELSKAI 112
>gi|289166755|ref|YP_003456893.1| ribonuclease P protein component (RNase P) [Legionella longbeachae
NSW150]
gi|288859928|emb|CBJ13914.1| putative ribonuclease P protein component (RNase P) [Legionella
longbeachae NSW150]
Length = 114
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
L + ++ V + F + NN R+G ++KK A +RNR
Sbjct: 5 KKTQRLITKNDYSHVFEQASKIVTSEFIILYRKNN--LGYARLGLALSKKMIAKAHDRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R L+E+ R D + +A++ + + ++
Sbjct: 63 IKRLLRESFRYEE----LPSVDIIFLARQGVAKQTNANINARLGKTWKKL 108
>gi|296115057|ref|ZP_06833699.1| ribonuclease P protein component [Gluconacetobacter hansenii ATCC
23769]
gi|295978394|gb|EFG85130.1| ribonuclease P protein component [Gluconacetobacter hansenii ATCC
23769]
Length = 116
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 3 NICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
LKKR +F V KG L+ L+ ++++ R GFTVTKK G +V R+R+R
Sbjct: 4 RSIRLKKRAEFLKVAAKGRKAPVSGMVLQALHRDDADSA-RHGFTVTKKVGNSVVRSRVR 62
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRL+E VR + G D V+I + + F L + + +++
Sbjct: 63 RRLREVVRQVGRELPLCGVDLVVIGRSATINRKFSSLLADYRKALKKA 110
>gi|289424482|ref|ZP_06426265.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|295131880|ref|YP_003582543.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|289155179|gb|EFD03861.1| ribonuclease P protein component [Propionibacterium acnes SK187]
gi|291375994|gb|ADD99848.1| ribonuclease P protein component [Propionibacterium acnes SK137]
gi|327446725|gb|EGE93379.1| ribonuclease P protein component [Propionibacterium acnes HL043PA2]
Length = 148
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 70 RSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 128
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 129 P-DRVAKDLDGAWHQALRKLR 148
>gi|289427475|ref|ZP_06429188.1| ribonuclease P protein component [Propionibacterium acnes J165]
gi|289159405|gb|EFD07596.1| ribonuclease P protein component [Propionibacterium acnes J165]
Length = 148
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 70 RSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 128
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 129 P-DRVAKDLDGAWHQALRKLR 148
>gi|154496120|ref|ZP_02034816.1| hypothetical protein BACCAP_00404 [Bacteroides capillosus ATCC
29799]
gi|150274675|gb|EDN01739.1| hypothetical protein BACCAP_00404 [Bacteroides capillosus ATCC
29799]
Length = 115
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + LK +F + KG+ P ++ N R+GFT K G AV RNR
Sbjct: 1 MDHTVSLKLNHEFRRLYAKGKSAVNPCMAVYCRKNRLGYN--RLGFTTGTKLGKAVVRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RRRL+E R + + + G+D V++A+ A + EL F+ +
Sbjct: 59 VRRRLREIYRTNEDKI-RPGYDIVVVARVRACHSRYAELQRQFLRTADKL 107
>gi|152993158|ref|YP_001358879.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
gi|151425019|dbj|BAF72522.1| ribonuclease P protein component [Sulfurovum sp. NBC37-1]
Length = 96
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
+ P+F L + +VGF +KK G AV RNR +R L+ +LK G
Sbjct: 7 KTWHSPYFVLFYKRSEEY----KVGFVASKKIGNAVHRNRAKRLLRAHFIENI-DLLKSG 61
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRR 108
YVL+AK L F E ++ +++
Sbjct: 62 -SYVLVAKPALLSKSFSESRKAYLHALKK 89
>gi|148377327|ref|YP_001256203.1| ribonuclease P protein component [Mycoplasma agalactiae PG2]
gi|148291373|emb|CAL58756.1| Ribonuclease P protein component [Mycoplasma agalactiae PG2]
Length = 107
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + NS ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQFANNFLVLYYKQANS---FKLGITVPKKFCNAVLRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R++K + V VLI +++ L F + + + +
Sbjct: 58 KRQVKAIIHKL--NVYDFKFHCVLILRKEFLNEKFDAKFSATQKLFNKLR 105
>gi|254496742|ref|ZP_05109601.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354037|gb|EET12713.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 114
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L ++ + V + + F + N+ R+G ++KK A +RNR+
Sbjct: 6 KTQRLLTKKDYNHVFEQAKKIVTSEFIILF--RENNLGYARLGLALSKKMIAKAHDRNRI 63
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R ++E+ R D + +A++ + + +
Sbjct: 64 KRLIRESFRQKE----LPAVDMIFLARQGVAKQANSNINTRLGKSWEKL 108
>gi|299783734|gb|ADJ41732.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Lactobacillus fermentum CECT 5716]
Length = 82
Score = 60.5 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ RVG +V KK G AV+R ++RR+++ + + K D+++IA++ A +
Sbjct: 3 KPNQPHFRVGISVGKKVGNAVQRGWVKRRIRQTLLEVKPEL-KQDVDFLVIARKSAADLS 61
Query: 95 FKELCNHFVERVRRNK 110
KE+ + V +
Sbjct: 62 MKEIKKNLVHALTLAH 77
>gi|166154126|ref|YP_001654244.1| ribonuclease P [Chlamydia trachomatis 434/Bu]
gi|166155001|ref|YP_001653256.1| ribonuclease P [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335365|ref|ZP_07223609.1| ribonuclease P [Chlamydia trachomatis L2tet1]
gi|226741386|sp|B0BAN9|RNPA_CHLTB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238687428|sp|B0B910|RNPA_CHLT2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|165930114|emb|CAP03597.1| ribonuclease P protein component [Chlamydia trachomatis 434/Bu]
gi|165930989|emb|CAP06551.1| ribonuclease P protein component [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 120
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ L KR+QF V++ + + + +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTSKVGITVSKKFGKAHQRNRF 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 66 KRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|15843557|ref|NP_338594.1| ribonuclease P [Mycobacterium tuberculosis CDC1551]
gi|161352458|ref|NP_218440.2| ribonuclease P [Mycobacterium tuberculosis H37Rv]
gi|161511523|ref|NP_857589.2| ribonuclease P [Mycobacterium bovis AF2122/97]
gi|254233405|ref|ZP_04926731.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289556191|ref|ZP_06445401.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308232613|ref|ZP_07664134.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308369279|ref|ZP_07666710.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308371504|ref|ZP_07667186.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308371554|ref|ZP_07667205.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308372784|ref|ZP_07667458.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308373865|ref|ZP_07433895.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308375036|ref|ZP_07667931.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308376283|ref|ZP_07668242.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308378518|ref|ZP_07668777.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308379668|ref|ZP_07669018.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308380867|ref|ZP_07669311.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|61234238|sp|P0A5X8|RNPA_MYCTU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|61234242|sp|P0A5X9|RNPA_MYCBO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1321902|emb|CAA63255.1| rnpA [Mycobacterium tuberculosis H37Rv]
gi|13883935|gb|AAK48408.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551]
gi|124603198|gb|EAY61473.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
C]
gi|289440823|gb|EFD23316.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
KZN 605]
gi|308213437|gb|EFO72836.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu001]
gi|308328154|gb|EFP17005.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu002]
gi|308328616|gb|EFP17467.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu003]
gi|308336271|gb|EFP25122.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu004]
gi|308339877|gb|EFP28728.1| ribonuclease P protein component [Mycobacterium tuberculosis
SUMu005]
gi|308343889|gb|EFP32740.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu006]
gi|308347673|gb|EFP36524.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu007]
gi|308351591|gb|EFP40442.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu008]
gi|308352298|gb|EFP41149.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu009]
gi|308356301|gb|EFP45152.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu010]
gi|308360188|gb|EFP49039.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu011]
gi|323717339|gb|EGB26544.1| ribonuclease P protein component [Mycobacterium tuberculosis
CDC1551A]
Length = 116
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 5 CILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+++ F VK G + S PRVG + K G AVER+R+ RR
Sbjct: 6 NRMRRSADFETTVKHGMRTVRSDMVVYWWR--GSGGGPRVGLIIAKSVGSAVERHRVARR 63
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+ + + H V+ A + + L +RR
Sbjct: 64 LRHVAGSIVKELHPSDH-VVIRALPSSRHVSSARLEQQLRCGLRRA 108
>gi|291278769|ref|YP_003495604.1| ribonuclease P protein component [Deferribacter desulfuricans SSM1]
gi|290753471|dbj|BAI79848.1| ribonuclease P protein component [Deferribacter desulfuricans SSM1]
Length = 115
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 2 SNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++K+++F V + + + GF V+KK AV RN+
Sbjct: 6 KKYERIRKKKEFEHVFSSGRWLNSKYVDICYA----FGQSRKAGFIVSKKISKKAVIRNK 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++R+L+E RL + +++AK+ + + +L N
Sbjct: 62 VKRKLREIYRLNKHSL-PDNLQLIIVAKKGVDKLKYSDLENEIKTLF 107
>gi|257785166|ref|YP_003180383.1| ribonuclease P protein component [Atopobium parvulum DSM 20469]
gi|257473673|gb|ACV51792.1| ribonuclease P protein component [Atopobium parvulum DSM 20469]
Length = 107
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ +K R +F V R + + V F K+ G AV RNR +R
Sbjct: 1 MKTIKSRAEFERVFSTGKRAQSSVLRIRVAPSTEAHPSEVAFVAPKRLGNAVFRNRCKRV 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L+EA R G+ G+ +L A +D ++ +R+
Sbjct: 61 LREAAR--KSGLPVEGYGIILFATKDTHSTNPADISISLDALLRK 103
>gi|94676620|ref|YP_588603.1| ribonuclease P protein component [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166226701|sp|Q1LTW1|RNPA_BAUCH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|94219770|gb|ABF13929.1| ribonuclease P protein component [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 115
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 1 MSNIC-----ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-A 54
M + L K FA V + + +L N+ + PRVG + KK A
Sbjct: 1 MVKLHFSRNLRLLKPDHFAFVFQKPKLV-RIQQMVILGRINTLVYPRVGMIIAKKYIKLA 59
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
ERN ++R ++E+ RL + D+++IAK + ++ + R
Sbjct: 60 HERNHIKRLIRESFRLNQHKLCI--MDFIIIAKSGLTKMNNFDIIKALEKLWHR 111
>gi|291294535|ref|YP_003505933.1| ribonuclease P protein component [Meiothermus ruber DSM 1279]
gi|290469494|gb|ADD26913.1| ribonuclease P protein component [Meiothermus ruber DSM 1279]
Length = 110
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVT-KKQGCAVERNRMRRR 63
LK + F ++ G + +G + ++ + RVG V+ K A RN++R
Sbjct: 5 SLKGEKAFQRLRGGRVGRGKYLTVRWFPLRPTAFNPVRVGIVVSNKVSKKATVRNKIR-- 62
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R + + V++A+ +A+ + +L ++++
Sbjct: 63 --RRLREILRKMHLPPCEMVVVAQPEAVEASYWDLLKDLTHALKKS 106
>gi|169632027|ref|YP_001705676.1| ribonuclease P protein component [Mycobacterium abscessus ATCC
19977]
gi|238688931|sp|B1MN96|RNPA_MYCA9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|169243994|emb|CAM65022.1| Ribonuclease P protein component [Mycobacterium abscessus]
Length = 127
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 7/127 (5%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLN-----NNNSNLLPRVGFTVTKKQGCA 54
+ + K +F VK+G + + P+VG V K G A
Sbjct: 2 LPTRHRMTKSSEFRQTVKRGVRTTHADLVIHLRRGCPDSACEQVEGPKVGLIVGKSVGGA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V R+R+ RRL+ A + V+ A + L + + R+ R
Sbjct: 62 VVRHRVSRRLRHAAAELLPKLEPVD-RMVIRALPSSSTALSASLRQQLRDGIDRSARRQE 120
Query: 115 SGKNFSR 121
R
Sbjct: 121 PAAERQR 127
>gi|315453619|ref|YP_004073889.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
gi|315132671|emb|CBY83299.1| ribonuclease P protein component [Helicobacter felis ATCC 49179]
Length = 122
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL------PRVGFTVTKKQGCAVE 56
+ LK RQF+ V K G + F L L N+++ +G +V+KK G AV+
Sbjct: 2 VVSLKTSRQFSYVYKKGVKKHHGLFMLYTLPLNSTHRHFLGIQESVLGLSVSKKVGNAVQ 61
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN ++RR++ V +AK +P+ L +H + +
Sbjct: 62 RNLIKRRVRAIF-QHLPLKTPQA--IVFVAKAGLHQLPYITLQDHIRQCL 108
>gi|261338548|ref|ZP_05966432.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
gi|270276570|gb|EFA22424.1| ribonuclease P protein component [Bifidobacterium gallicum DSM
20093]
Length = 89
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R+G V+K G AV RN ++RR + R E VL G D V+ AK A F+ L
Sbjct: 16 RLGLAVSKSVGNAVVRNAVKRRFRVLART-YEDVLPLGCDVVMRAKPSAAHASFQSLDLQ 74
Query: 102 FVERVRRNKRSYYSG 116
+ + +
Sbjct: 75 VHKLFKAIAQQMEQQ 89
>gi|300087855|ref|YP_003758377.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527588|gb|ADJ26056.1| ribonuclease P protein component [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 95
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
L + N + L R GF V++K G AV RN +RRRLKE +R L G+D V IA++
Sbjct: 12 LVMKKVFNGSSLNRYGFVVSRKVGGAVVRNMVRRRLKEIIR---GQNLMPGYDIVFIARQ 68
Query: 89 DALFIPFKELCNHFVERVRRN 109
+ + +L +R
Sbjct: 69 TSARATYAQLEKSSRGLAKRA 89
>gi|239918806|ref|YP_002958364.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|281414967|ref|ZP_06246709.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
gi|133181|sp|P21172|RNPA_MICLU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494112|sp|C5C7X2|RNPA_MICLC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|455290|gb|AAA25313.1| ribonuclease P (rnpA) [Micrococcus luteus]
gi|239840013|gb|ACS31810.1| ribonuclease P protein component [Micrococcus luteus NCTC 2665]
Length = 132
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSL--------EVLNNNNSNLLPRVGFTVTKKQG 52
+ ++ +F + + R G + + + + S PR GF V+K G
Sbjct: 2 LPRDRRVRTPAEFRHLGRTGTRAGRRTVVVSVATDPDQTRSTSPSAPRPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRL--CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++RRL+ V + + A A + L V + +
Sbjct: 62 NAVTRNRVKRRLRAVVAEQMRLPPLRDLPVLVQVRALPAAAEADYALLRRETVGALGKAL 121
Query: 111 RS 112
+
Sbjct: 122 KP 123
>gi|15616644|ref|NP_239856.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11134494|sp|P57130|RNPA_BUCAI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|25289268|pir||F84931 ribonuclease P (EC 3.1.26.5) protein component [imported] -
Buchnera sp. (strain APS)
gi|10038707|dbj|BAB12742.1| ribonuclease P protein component [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 115
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L F V G ++K + +L N PR+G ++ +K A RN +
Sbjct: 7 KKQLRLSDSTSFQDVFNGSVKKKNTLEISILGRFNLLGHPRLGLSIPRKNIKHAHNRNLI 66
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++E RL +L D+V+IAK++ LF+ + +
Sbjct: 67 KRLVRETFRLLQYKLL--SMDFVVIAKKNILFLNNTRIIDMLNSLW 110
>gi|307249015|ref|ZP_07531023.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854473|gb|EFM86668.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 100
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P ++ L +N+ +PR+G TV K A +RNR++R ++E+ RL +
Sbjct: 7 RASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PS 62
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
D+V +AK + L + R+ R
Sbjct: 63 ADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLTKKP 99
>gi|313678195|ref|YP_004055935.1| ribonuclease P protein component [Mycoplasma bovis PG45]
gi|312950222|gb|ADR24817.1| ribonuclease P protein component [Mycoplasma bovis PG45]
Length = 107
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+K +F + K + + F + ++G TV KK AV RN
Sbjct: 1 MKKEFRLQKSWEFDEIIKSKKQHANNFLVLYYK---EASSFKLGITVPKKFCNAVFRNYY 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R++K + LK VLI +++ L F N + + K
Sbjct: 58 KRQVKAIIHKLNAYDLK--FHCVLILRKEFLKEKFVAKFNATQKLFNKLK 105
>gi|146329543|ref|YP_001209840.1| ribonuclease P protein component [Dichelobacter nodosus VCS1703A]
gi|146233013|gb|ABQ13991.1| ribonuclease P protein component [Dichelobacter nodosus VCS1703A]
Length = 116
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
S L +R +F V ++ VL R+G V + A ERNR+
Sbjct: 9 SKNARLTQRGEFDRVFATPDQRSSDRYFTVLGRFCGEERARLGIIVAKRHIARAHERNRV 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++E+ R L D V++A+ A EL + +
Sbjct: 69 KRVVRESFRQYRFKKLL---DLVVLARASAQTATNDELQRSLARHWKHIQ 115
>gi|71066700|ref|YP_265427.1| ribonuclease P protein component [Psychrobacter arcticus 273-4]
gi|71039685|gb|AAZ19993.1| ribonuclease P protein component [Psychrobacter arcticus 273-4]
Length = 123
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
+ L F V RK L N++ PRVG +TK++ AV RN +
Sbjct: 14 TKEQRLLTPTAFREVFDAPERKLHQSHLMAFVRTNTHEQPRVGMAITKRKVPTAVTRNLI 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R+++E R + D V I K + KEL ++ ++
Sbjct: 74 KRQIREQFR--VKAFSLENKDVVFIIKNSVKGLSNKELKTEINNIFKKIEKK 123
>gi|240168407|ref|ZP_04747066.1| ribonuclease P [Mycobacterium kansasii ATCC 12478]
Length = 120
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 1 MSNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNL--LPRVGFTVTKKQGCAVER 57
+S +++ +F VK G P + V S PRVG + K G AVER
Sbjct: 2 LSARNRMRRSTEFDATVKYGVRTVQPDVVVHVRRGTQSQDCSGPRVGLIIAKSVGTAVER 61
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R+ RRL+ R + V+ A + + L +RR
Sbjct: 62 HRVARRLRHVARPLLGNLHPCD-QVVIRALPSSRQVSSVRLEQQVRRGLRRA 112
>gi|90023656|ref|YP_529483.1| ribonuclease P protein component [Saccharophagus degradans 2-40]
gi|123089894|sp|Q21DF8|RNPA_SACD2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|89953256|gb|ABD83271.1| ribonuclease P protein component [Saccharophagus degradans 2-40]
Length = 135
Score = 60.5 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L F V + + +L ++ R+G V KK A +RN+ +
Sbjct: 14 KDQRLLNSSDFTPVFNDAPIRASNSEILILCKLSTTGKARLGLVVAKKNIKHANKRNQFK 73
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
R +E+ RL + D +++A+R A + EL F +R +
Sbjct: 74 RIARESFRLKQHKL--PPIDAIVLARRGADSLSKVELRRMFDGLWKRVVKKAEK 125
>gi|147679255|ref|YP_001213470.1| RNase P protein component [Pelotomaculum thermopropionicum SI]
gi|189043740|sp|A5CY49|RNPA_PELTS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146275352|dbj|BAF61101.1| RNase P protein component [Pelotomaculum thermopropionicum SI]
Length = 112
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + +LKK + + V ++G+ + L +N+ R GF V++K AV RNR
Sbjct: 1 MKVLDVLKKNKDYGRVCRRGKSVADRHIVMYFL--DNNLGRCRYGFAVSRKIRSAVRRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
RR L+EA RL + G+D+V +A+RD + +++ ++ ++R + +
Sbjct: 59 ARRLLREACRLN-KEKFPEGYDFVFMARRDMTDLKCQQVEESILKLLKRAEINRS 112
>gi|71901966|ref|ZP_00684017.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|71728271|gb|EAO30451.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
Length = 121
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AYKLVPG--DYVVVVRQTAKDLSNAELSVALLSLLRRI 98
>gi|254515872|ref|ZP_05127932.1| ribonuclease P protein component [gamma proteobacterium NOR5-3]
gi|219675594|gb|EED31960.1| ribonuclease P protein component [gamma proteobacterium NOR5-3]
Length = 116
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRR 63
L ++ V K K L +L +N R+G V K AV+RN ++R
Sbjct: 6 QRLLTAADYSQVFKDPDHKAGQKELLLLARHNDLAQHRLGLAVAKKHVPTAVKRNIIKRL 65
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+E R+ A+ D V++ + A + ++ R
Sbjct: 66 AREQFRVLAQE--TPAMDIVVLTRPGARDASSTHIKEALKKQFARL 109
>gi|307264649|ref|ZP_07546229.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306869961|gb|EFN01725.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 101
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P ++ L +N+ +PR+G TV K A +RNR++R ++E+ RL +
Sbjct: 7 RASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PS 62
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
D+V +AK + L + R+ R +
Sbjct: 63 ADFVFVAKGGIGKLDNATLFAMLEKVWARHIRLAKKPQA 101
>gi|317051004|ref|YP_004112120.1| ribonuclease P protein component [Desulfurispirillum indicum S5]
gi|316946088|gb|ADU65564.1| ribonuclease P protein component [Desulfurispirillum indicum S5]
Length = 117
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
L+K RQF V G++ + +F L L + V +KK G AV RNR++R +
Sbjct: 11 RLQKNRQFRAVYDAGKVVRSQYFVLVFLRAEQLKVGVVV----SKKVGNAVVRNRLKRLM 66
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+EA R ++ + ++ A+ A + E + ++R K
Sbjct: 67 REAFRRN-RKYIQGQYHIIMAARPPAAELKGPEAMSALEHLLQRAK 111
>gi|289209761|ref|YP_003461827.1| ribonuclease P protein component [Thioalkalivibrio sp. K90mix]
gi|288945392|gb|ADC73091.1| ribonuclease P protein component [Thioalkalivibrio sp. K90mix]
Length = 116
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L + V +G + +L + A +RNR+
Sbjct: 9 PRQARLLVGADYRHVFADARPIRGRYLTLLYRAREGGGEPRLGLAIAKRHVRNATDRNRV 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R ++EA R D +++A+ A + L + + R +
Sbjct: 69 KRIVREAFR--QRRAALPPVDLIVLARAGAGTCDRRALRSEMETLLDRLQ 116
>gi|32034083|ref|ZP_00134327.1| COG0594: RNase P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209397|ref|YP_001054622.1| ribonuclease P [Actinobacillus pleuropneumoniae L20]
gi|307246877|ref|ZP_07528942.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251212|ref|ZP_07533133.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253631|ref|ZP_07535498.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255859|ref|ZP_07537660.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260312|ref|ZP_07542019.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262441|ref|ZP_07544086.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126098189|gb|ABN75017.1| ribonuclease P [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|306852162|gb|EFM84402.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856728|gb|EFM88863.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858867|gb|EFM90913.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861127|gb|EFM93120.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865563|gb|EFM97444.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306867818|gb|EFM99649.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 100
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P ++ L +N+ +PR+G TV K A +RNR++R ++E+ RL +
Sbjct: 7 RASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PS 62
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
D+V +AK + L + R+ R
Sbjct: 63 ADFVFVAKGGIGKLDNATLFAMLEKLWARHIRLAKKP 99
>gi|307258044|ref|ZP_07539796.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863407|gb|EFM95338.1| Ribonuclease P protein component [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 100
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P ++ L +N+ +PR+G TV K A +RNR++R ++E+ RL +
Sbjct: 7 RASTPELTI--LARHNNLDIPRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHEL--PS 62
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
D+V +AK + L + R+ R
Sbjct: 63 ADFVFVAKGGIGKLDNATLFAMLEKLWTRHIRLAKKP 99
>gi|257127033|ref|YP_003165147.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
gi|257050972|gb|ACV40156.1| ribonuclease P protein component [Leptotrichia buccalis C-1013-b]
Length = 109
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I +KK + F+L+ K + + + + N N+ R GF +KK G AV+RNR++R
Sbjct: 3 INKIKKSKDFSLIYNKSQKMHTKYAIIFIKENMNNEQ--RFGFVASKKTGNAVQRNRIKR 60
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVR 107
KE V+ + + DY+ + K + +K++ ++ ++
Sbjct: 61 LFKEFVKTH-KNKFRENTDYIFVGKSVLKEKIKNLKYKDIEKDIIKVIK 108
>gi|182682732|ref|YP_001830892.1| ribonuclease P [Xylella fastidiosa M23]
gi|182632842|gb|ACB93618.1| ribonuclease P protein component [Xylella fastidiosa M23]
Length = 121
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRRI 98
>gi|328905783|gb|EGG25559.1| ribonuclease P protein component [Propionibacterium sp. P08]
Length = 95
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ + PRVGF V+K G AV RNR++RRL+ R + + G V+ A A
Sbjct: 17 RSDLGVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVNEL-EDGTVVVVRALPAAATQ 75
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 76 PN-RVAKDLDGAWHQALRKLR 95
>gi|325267551|ref|ZP_08134203.1| ribonuclease P protein component [Kingella denitrificans ATCC
33394]
gi|324980901|gb|EGC16561.1| ribonuclease P protein component [Kingella denitrificans ATCC
33394]
Length = 119
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
C L K +F+ V ++ F + NN R+G V+KK A RN M+
Sbjct: 7 KACRLLKTEEFSSVFALRKQRSREFLQVLRLENNVQGFARLGLVVSKKAAKRANRRNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
R ++E R + HD+V+ ++ +
Sbjct: 67 RVIREWFRRHQ--CVLPPHDFVVRVRKAFDKDSAPQARQEL 105
>gi|302035742|ref|YP_003796064.1| putative ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
gi|300603806|emb|CBK40138.1| putative Ribonuclease P, protein component [Candidatus Nitrospira
defluvii]
Length = 122
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ R +KK G F+L++ + +G + ++ G AV RNR +R +
Sbjct: 12 LKRSRDIQHIKKNGRRVSTGLFNLQIC--PGLSQDVMLGIVIGRRFGTAVRRNRAKRLFR 69
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
E R ++ GH +++ KR+ L +P+ EL N + ++R
Sbjct: 70 ELGRAVRPALV-PGHAFLVFPKRECLNLPYAELQNLWRGTLQR 111
>gi|108757732|ref|YP_635614.1| ribonuclease P protein component [Myxococcus xanthus DK 1622]
gi|108461612|gb|ABF86797.1| ribonuclease P protein component [Myxococcus xanthus DK 1622]
Length = 140
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L +RR+F V++G +K P L L NS RVG TV+ K G AV R R+R
Sbjct: 19 PKALRLLQRREFLEVQEGG-QKVPSDCLLALVKRNSRPYSRVGLTVSSKVGNAVVRARLR 77
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
R L+E R G D VL+A+ A F L F R+ +R + + +
Sbjct: 78 RVLRELFRKRRMQW-PSGLDVVLVARSSAKDASFPALSRAFDGVTRKLQRLPRAAETKPK 136
Query: 122 K 122
+
Sbjct: 137 E 137
>gi|71275536|ref|ZP_00651822.1| ribonuclease P protein [Xylella fastidiosa Dixon]
gi|71900183|ref|ZP_00682323.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|170731354|ref|YP_001776787.1| ribonuclease P [Xylella fastidiosa M12]
gi|71163836|gb|EAO13552.1| ribonuclease P protein [Xylella fastidiosa Dixon]
gi|71730072|gb|EAO32163.1| ribonuclease P protein [Xylella fastidiosa Ann-1]
gi|167966147|gb|ACA13157.1| ribonuclease P [Xylella fastidiosa M12]
Length = 121
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 6 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 62
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 63 AHKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRRI 98
>gi|83649690|ref|YP_438125.1| ribonuclease P protein component [Hahella chejuensis KCTC 2396]
gi|83637733|gb|ABC33700.1| ribonuclease P protein component [Hahella chejuensis KCTC 2396]
Length = 97
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+ +L N PRVG + KK A RNR+RR ++EA RL + D V++A+
Sbjct: 1 MLLLAIPNQLSHPRVGLVIAKKNIKLATGRNRVRRLIREAFRLQQANI--PSVDIVVLAR 58
Query: 88 RDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+ + +E+ + R + + + + S
Sbjct: 59 KAVADMNNEEVFQCLTKLYSRIGQQHANALAKANSS 94
>gi|47459466|ref|YP_016328.1| ribonuclease p protein component [Mycoplasma mobile 163K]
gi|60390449|sp|Q6KH14|RNPA_MYCMO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|47458796|gb|AAT28117.1| ribonuclease p protein component [Mycoplasma mobile 163K]
Length = 112
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M ILKK +F + + + + ++S ++G ++ KK AV+RN +
Sbjct: 1 MKRKYILKKNWEFQKIIDSKKQFIFPTIILYYKKSDS---FQIGISIPKKFAIAVKRNYL 57
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R++K + ++ +LI +++ L + F + + + R
Sbjct: 58 KRQIKSILDQIRP--YNLSYEMILIVRKNYLNLNFLQKQQEIKKIIERISNGKEK 110
>gi|15839370|ref|NP_300058.1| ribonuclease P [Xylella fastidiosa 9a5c]
gi|9108027|gb|AAF85566.1|AE004083_5 ribonuclease P [Xylella fastidiosa 9a5c]
Length = 142
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 27 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 83
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 84 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRRI 119
>gi|289705894|ref|ZP_06502273.1| ribonuclease P protein component [Micrococcus luteus SK58]
gi|289557379|gb|EFD50691.1| ribonuclease P protein component [Micrococcus luteus SK58]
Length = 132
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSL--------EVLNNNNSNLLPRVGFTVTKKQG 52
+ ++ +F + + R G + + + + S PR GF V+K G
Sbjct: 2 LPRDRRVRTPAEFRHLGRTGTRAGRRTVVVSVATDPDQTRSTSPSAPRPRAGFVVSKAVG 61
Query: 53 CAVERNRMRRRLKEAVRL--CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
AV RNR++RRL+ V + + A A + L V + +
Sbjct: 62 NAVTRNRVKRRLRAVVADQMRLPPLRDLPVLVQVRALPAAAEADYALLRRETVGALGKAL 121
Query: 111 RS 112
+
Sbjct: 122 KP 123
>gi|93004832|ref|YP_579269.1| ribonuclease P protein component [Psychrobacter cryohalolentis K5]
gi|92392510|gb|ABE73785.1| ribonuclease P protein component [Psychrobacter cryohalolentis K5]
Length = 123
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
+ L F V RK L N++ PRVG +TK++ AV RN +
Sbjct: 14 TKAQRLLTPAAFREVFDAPERKLHQSHLMAFVRTNTHEQPRVGMAITKRKVPTAVARNLI 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+R+++E R+ A + D V I K + KE+ + ++ ++
Sbjct: 74 KRQVREQFRVKASNL--ENKDIVFIVKSSVKGLSNKEIKMEVINIFKKIEKK 123
>gi|318058972|ref|ZP_07977695.1| putative RNase P component [Streptomyces sp. SA3_actG]
gi|318077326|ref|ZP_07984658.1| putative RNase P component [Streptomyces sp. SA3_actF]
Length = 74
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
R GF V+K G AV R ++R+L+ +R +L G V+ A A +L
Sbjct: 2 RAGFVVSKAVGKAVVRTSVKRKLRHLIRDRLS-LLPPGSLVVVRALPGAGDADHAQLARD 60
Query: 102 FVERVRRN 109
++R
Sbjct: 61 LDAALKRL 68
>gi|262038120|ref|ZP_06011521.1| ribonuclease P protein component [Leptotrichia goodfellowii F0264]
gi|261747844|gb|EEY35282.1| ribonuclease P protein component [Leptotrichia goodfellowii F0264]
Length = 108
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 3 NICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
I +KK + FA + + + + + NN R GF +KK G AV+RNR++
Sbjct: 2 QINKIKKNKDFAFIYNNSKKVYTRYAIIFIKENNKKEQ--RFGFVASKKTGKAVQRNRIK 59
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVR 107
R +E V+L K DY+ + K + + +K++ ++ V+
Sbjct: 60 RLFREFVKLNKSK-FKESSDYIFVGKSNLKENIKSLKYKDIEKDMLKAVK 108
>gi|154245866|ref|YP_001416824.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
gi|154159951|gb|ABS67167.1| ribonuclease P protein component [Xanthobacter autotrophicus Py2]
Length = 187
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
L+KRR F K E F ++ + ++ RVGFTVTKK G +V RNR+RRRL+E
Sbjct: 4 LRKRRDFLAAAKAERAGATSFLMQGRDRGDA-GTVRVGFTVTKKTGNSVVRNRIRRRLRE 62
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
AVR + G DYVL+A+ AL PF+ L VR+ G
Sbjct: 63 AVRRVLPDAGRAGFDYVLVAREAALRTPFETLVREIERSVRKVHTPKAPG 112
>gi|57242372|ref|ZP_00370311.1| ribonuclease P protein component [Campylobacter upsaliensis RM3195]
gi|57017052|gb|EAL53834.1| ribonuclease P protein component [Campylobacter upsaliensis RM3195]
Length = 107
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 12 QFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
+F V K G+ L L N +KK G AV RNR +R L+
Sbjct: 11 EFVAVYKSGKKWFCDGLILFYLPTNERKR----AVVASKKVGKAVVRNRAKRVLRALFAK 66
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+ YVL+AK D F +L ++R +
Sbjct: 67 VENDLRNGK--YVLVAKADLNKFSFLKLEKSLKWGLKRIQ 104
>gi|291303916|ref|YP_003515194.1| ribonuclease P protein [Stackebrandtia nassauensis DSM 44728]
gi|290573136|gb|ADD46101.1| ribonuclease P protein [Stackebrandtia nassauensis DSM 44728]
Length = 89
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
++ + R GF V+K G AV RN+++RRL+ G +G D V+ A
Sbjct: 2 VVHLATRDDETARGARAGFIVSKAVGPAVTRNKVKRRLRHLAAPRLAGW-PNGTDVVVRA 60
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYY 114
A I F+ L E + RS
Sbjct: 61 LPAAATISFQRLSRDVDEALAILSRSRR 88
>gi|255349182|ref|ZP_05381189.1| ribonuclease P [Chlamydia trachomatis 70]
gi|255503719|ref|ZP_05382109.1| ribonuclease P [Chlamydia trachomatis 70s]
Length = 120
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCYRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|119900280|ref|YP_935493.1| ribonuclease P [Azoarcus sp. BH72]
gi|166226699|sp|A1KCQ1|RNPA_AZOSB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119672693|emb|CAL96607.1| ribonuclease P [Azoarcus sp. BH72]
Length = 120
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 6/109 (5%)
Query: 5 CILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
L K +F+ V +G +F L N+ R+G V KK A RN ++R
Sbjct: 15 HRLHKTDEFSSVFAFRRALRGRYFMLHY--RPNALTTARLGVVVAKKLAKRANVRNLVKR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+E R + + HD ++ L ++ R +
Sbjct: 73 IARERFR--RQRTVLPAHDLIVRLHAPVTEASRAALNQDLLQLFGRLPQ 119
>gi|254429851|ref|ZP_05043558.1| ribonuclease P protein component [Alcanivorax sp. DG881]
gi|196196020|gb|EDX90979.1| ribonuclease P protein component [Alcanivorax sp. DG881]
Length = 121
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
+ L Q+ V K S +L N+ PR+G + +K+ AV+R R+
Sbjct: 8 TRQHRLLTGSQYQTVFDQPEWKVGLGSYLLLVTRNTQPQPRLGLVIGRKRAKRAVDRARI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+RR++E R + + G D +L+ + ++ +
Sbjct: 68 KRRVREQFRCRQQELA--GLDIILLVRGRIENPDPDQVTRDITRLFDKLLAKCRQA 121
>gi|59802474|ref|YP_209186.1| ribonuclease P [Neisseria gonorrhoeae FA 1090]
gi|194100147|ref|YP_002003286.1| ribonuclease P [Neisseria gonorrhoeae NCCP11945]
gi|254492911|ref|ZP_05106082.1| ribonuclease P [Neisseria gonorrhoeae 1291]
gi|260441337|ref|ZP_05795153.1| ribonuclease P [Neisseria gonorrhoeae DGI2]
gi|268593983|ref|ZP_06128150.1| ribonuclease P protein component [Neisseria gonorrhoeae 35/02]
gi|268596037|ref|ZP_06130204.1| ribonuclease P protein component [Neisseria gonorrhoeae FA19]
gi|268598160|ref|ZP_06132327.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|268600504|ref|ZP_06134671.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|268602737|ref|ZP_06136904.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|268681286|ref|ZP_06148148.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|268683457|ref|ZP_06150319.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|268685763|ref|ZP_06152625.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
gi|291044696|ref|ZP_06570405.1| ribonuclease P protein component [Neisseria gonorrhoeae DGI2]
gi|293397797|ref|ZP_06642003.1| ribonuclease P [Neisseria gonorrhoeae F62]
gi|67461224|sp|Q5F4W3|RNPA_NEIG1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238690174|sp|B4RJJ5|RNPA_NEIG2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|59719369|gb|AAW90774.1| putative ribonuclease P protein component [Neisseria gonorrhoeae FA
1090]
gi|193935437|gb|ACF31261.1| ribonuclease P [Neisseria gonorrhoeae NCCP11945]
gi|226511951|gb|EEH61296.1| ribonuclease P [Neisseria gonorrhoeae 1291]
gi|268547372|gb|EEZ42790.1| ribonuclease P protein component [Neisseria gonorrhoeae 35/02]
gi|268549825|gb|EEZ44844.1| ribonuclease P protein component [Neisseria gonorrhoeae FA19]
gi|268582291|gb|EEZ46967.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|268584635|gb|EEZ49311.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|268586868|gb|EEZ51544.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|268621570|gb|EEZ53970.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|268623741|gb|EEZ56141.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|268626047|gb|EEZ58447.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
gi|291011590|gb|EFE03586.1| ribonuclease P protein component [Neisseria gonorrhoeae DGI2]
gi|291611743|gb|EFF40812.1| ribonuclease P [Neisseria gonorrhoeae F62]
gi|317165574|gb|ADV09115.1| ribonuclease P [Neisseria gonorrhoeae TCDC-NG08107]
Length = 121
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|325204856|gb|ADZ00310.1| ribonuclease P protein component [Neisseria meningitidis
M01-240355]
Length = 121
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|156741408|ref|YP_001431537.1| ribonuclease P protein component [Roseiflexus castenholzii DSM
13941]
gi|189043742|sp|A7NJ53|RNPA_ROSCS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|156232736|gb|ABU57519.1| ribonuclease P protein component [Roseiflexus castenholzii DSM
13941]
Length = 122
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
M L+ Q+ V++ + N + R GF V K+ G AV RNR+
Sbjct: 1 MKRAYRLRTPEQYQRVRRDGRTWDAGMLML-NAAPNRRRISRCGFIVAKRLGGAVVRNRI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVRRN 109
RRR++EAVRL + G D V IA+ I F +L ++R
Sbjct: 60 RRRVREAVRLLYPQIA-PGWDMVFIARSPALAEIAFPQLQALVQRLLQRA 108
>gi|87310425|ref|ZP_01092555.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
gi|87286924|gb|EAQ78828.1| probable ribonuclease P protein component [Blastopirellula marina
DSM 3645]
Length = 125
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L + QF V G+ + + N L PR+G V+KK G AV RNR +R
Sbjct: 11 KEKRLLRTAQFDQVFAGKCSSADGILVVYIA-PNDQLGPRIGLVVSKKVGNAVRRNRWKR 69
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
RL+EA R + L D ++I + A+ P + LC VE RR ++
Sbjct: 70 RLREAFR-IQQARLPENCDLIVIPR-AAIEPPLERLCRSLVETARRARKKLGQRGAKQ 125
>gi|118472073|ref|YP_891137.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
gi|118173360|gb|ABK74256.1| ribonuclease P protein component [Mycobacterium smegmatis str. MC2
155]
Length = 123
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 7 LKKRRQFA-LVKKGELRKGPFFSLEVLN------------NNNSNLLPRVGFTVTKKQGC 53
+++ +F+ V +G P + L ++ PR+G V+K G
Sbjct: 1 MRRSAEFSVTVSRGVRAAQPDVVVHALRLESNAGNAGDDGDDGDANGPRIGLIVSKAVGN 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
AVER+R+ RRL+ + G+ V+ A+ + L + + R
Sbjct: 61 AVERHRVSRRLRHVAKTFVSGLDPADL-IVIRARPSSRDATSSRLERQLGQALERVSSKR 119
Query: 114 YSGK 117
+
Sbjct: 120 RASP 123
>gi|12045324|ref|NP_073135.1| ribonuclease P protein component [Mycoplasma genitalium G37]
gi|1350815|sp|P47703|RNPA_MYCGE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3845060|gb|AAC72485.1| ribonuclease P protein component [Mycoplasma genitalium G37]
gi|166079072|gb|ABY79690.1| ribonuclease P protein component [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 128
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L++R+ F + + + R F + N++ RV ++ K + AV+RN +
Sbjct: 11 KKSHSLRERKVFTTILQSKTRFFGTF-INAYFIKNNHSTWRVAISIAKTKYKLAVQRNLI 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ + + + D ++I + + + FKE F++ ++R K
Sbjct: 70 KRQIRSIFQQISNNLEP--WDILVIVNKGFIELTFKEKQKLFLQLLKRIK 117
>gi|255020156|ref|ZP_05292225.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
gi|254970298|gb|EET27791.1| ribonuclease P protein component [Acidithiobacillus caldus ATCC
51756]
Length = 114
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 3 NICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ + + + +G R P + VL N+ R+G V++K G AV RNR++
Sbjct: 12 RRYRLRHKAEIRRTLSEGRKRSFPELACYVLAND--RGFARLGLAVSRKVGNAVLRNRVK 69
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RRL+EA R G D +++AK + ++ L +R
Sbjct: 70 RRLREAFR--QSPWRDQGKDLMVVAKPASAQGSYQTLSMRVDAVLR 113
>gi|15605517|ref|NP_220303.1| ribonuclease P [Chlamydia trachomatis D/UW-3/CX]
gi|255311619|ref|ZP_05354189.1| ribonuclease P [Chlamydia trachomatis 6276]
gi|255317920|ref|ZP_05359166.1| ribonuclease P [Chlamydia trachomatis 6276s]
gi|9789779|sp|O84789|RNPA_CHLTR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3329249|gb|AAC68379.1| Ribonuclease P Protein Component [Chlamydia trachomatis D/UW-3/CX]
gi|296437264|gb|ADH19434.1| ribonuclease P [Chlamydia trachomatis G/11222]
gi|297748912|gb|ADI51458.1| Ribonuclease P protein component [Chlamydia trachomatis D-EC]
gi|297749792|gb|ADI52470.1| Ribonuclease P protein component [Chlamydia trachomatis D-LC]
Length = 120
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|255660032|ref|ZP_05405441.1| ribonuclease P protein component [Mycoplasma genitalium G37]
Length = 121
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L++R+ F + + + R F + N++ RV ++ K + AV+RN +
Sbjct: 4 KKSHSLRERKVFTTILQSKTRFFGTF-INAYFIKNNHSTWRVAISIAKTKYKLAVQRNLI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ + + + D ++I + + + FKE F++ ++R K
Sbjct: 63 KRQIRSIFQQISNNLEP--WDILVIVNKGFIELTFKEKQKLFLQLLKRIK 110
>gi|108563799|ref|YP_628115.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
gi|123073716|sp|Q1CRI1|RNPA_HELPH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|107837572|gb|ABF85441.1| ribonuclease P, protein component [Helicobacter pylori HPAG1]
Length = 166
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 6 ILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPR-------------------VGF 45
LK + +F V KG + FFSL VL+ + + +G
Sbjct: 18 SLKNKSEFDRVYQKGFKKHNLFFSLFVLDLSKEPPKGKEGFKDPLSCRLKDKKTLYLLGL 77
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+V+KK G AV+RN ++RRL+ L G V + + D + F L HF+E
Sbjct: 78 SVSKKVGNAVKRNLIKRRLRSL--TLKHAALCQGLALVFVPRSDCYHLDFWALEKHFLEM 135
Query: 106 VRRNKRSYYSGKNFSRK 122
+ K K
Sbjct: 136 LTSIKNYIEQSLKRLEK 152
>gi|294789685|ref|ZP_06754918.1| ribonuclease P protein component [Simonsiella muelleri ATCC 29453]
gi|294482397|gb|EFG30091.1| ribonuclease P protein component [Simonsiella muelleri ATCC 29453]
Length = 119
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K +F+ V ++ F + + N+ PR+G V+KK A +RN M+
Sbjct: 10 KAYRLLKTEEFSSVFALRKQRSRVFIQVMQSAGNTLAYPRLGLVVSKKVAKRANKRNYMK 69
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E R + D+V+ + + E +
Sbjct: 70 RVIREWFRCHKHDL--PARDFVVRVRVAFDRGTALQARQELAELM 112
>gi|322379153|ref|ZP_08053549.1| ribonuclease P, protein component (rnpA) [Helicobacter suis HS1]
gi|322381049|ref|ZP_08055077.1| ribonuclease P, protein component [Helicobacter suis HS5]
gi|321146519|gb|EFX41391.1| ribonuclease P, protein component [Helicobacter suis HS5]
gi|321148416|gb|EFX42920.1| ribonuclease P, protein component (rnpA) [Helicobacter suis HS1]
Length = 119
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL------PRVGFTVTKKQGCAVE 56
+ LK +QF + K G FF++ L + +G +V+KK G AV+
Sbjct: 1 MQSLKTTQQFNYLYKKGMRIHSKFFTMYSLPLDGLPKFFSYPSTSLLGLSVSKKVGNAVQ 60
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RN ++RR++ + + V +AK + +K+L + + R +
Sbjct: 61 RNLIKRRVRSLFKNIHLEKERV---IVFVAKAGITQLKYKDLKQQVLACLYRKTKPL 114
>gi|28199978|ref|NP_780292.1| ribonuclease P [Xylella fastidiosa Temecula1]
gi|32129972|sp|Q879S2|RNPA_XYLFT RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|28058109|gb|AAO29941.1| ribonuclease P [Xylella fastidiosa Temecula1]
Length = 135
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 20 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 77 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRRI 112
>gi|255507400|ref|ZP_05383039.1| ribonuclease P [Chlamydia trachomatis D(s)2923]
gi|289525828|emb|CBJ15309.1| ribonuclease P protein component [Chlamydia trachomatis Sweden2]
gi|296435408|gb|ADH17586.1| ribonuclease P [Chlamydia trachomatis E/150]
gi|296439125|gb|ADH21278.1| ribonuclease P [Chlamydia trachomatis E/11023]
Length = 120
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V++ G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRSGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPDFLKLSEELLQRI 108
>gi|329894827|ref|ZP_08270627.1| Ribonuclease P protein component [gamma proteobacterium IMCC3088]
gi|328922721|gb|EGG30055.1| Ribonuclease P protein component [gamma proteobacterium IMCC3088]
Length = 137
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRL 64
L + + V K S +L + R+G + KK RNR++R+
Sbjct: 15 RLLTKSDYQHVFDNAPFKASSQSFLLLAKPSLGDTSRLGLVIAKKHIKTAVGRNRVKRQA 74
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+E R EG L D +L+A+ A + K + + + + + + RK+
Sbjct: 75 RELFRCQKEGALP--LDMILLARSGAGSLDTKFIRIAITKMIEKVQTQASRNVSEHRKA 131
>gi|294784387|ref|ZP_06749678.1| ribonuclease P protein component [Fusobacterium sp. 3_1_27]
gi|294487959|gb|EFG35314.1| ribonuclease P protein component [Fusobacterium sp. 3_1_27]
Length = 111
Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +KK G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF--NKNKLEYSRFGFVASKKVGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
+E +RL + + + +IAK+ + ++++ + +K
Sbjct: 59 LFREYIRLNIDKINDNYDII-IIAKKKFGENIEILKYQDIEKDLNRIFKNSK 109
>gi|313771068|gb|EFS37034.1| putative ribonuclease P protein component [Propionibacterium acnes
HL074PA1]
gi|313792570|gb|EFS40656.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA1]
gi|313803571|gb|EFS44753.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA2]
gi|313811767|gb|EFS49481.1| putative ribonuclease P protein component [Propionibacterium acnes
HL083PA1]
gi|313814223|gb|EFS51937.1| putative ribonuclease P protein component [Propionibacterium acnes
HL025PA1]
gi|313815415|gb|EFS53129.1| putative ribonuclease P protein component [Propionibacterium acnes
HL059PA1]
gi|313829187|gb|EFS66901.1| putative ribonuclease P protein component [Propionibacterium acnes
HL063PA2]
gi|313832761|gb|EFS70475.1| putative ribonuclease P protein component [Propionibacterium acnes
HL056PA1]
gi|313839620|gb|EFS77334.1| putative ribonuclease P protein component [Propionibacterium acnes
HL086PA1]
gi|314916211|gb|EFS80042.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA4]
gi|314921814|gb|EFS85645.1| putative ribonuclease P protein component [Propionibacterium acnes
HL050PA3]
gi|314930921|gb|EFS94752.1| putative ribonuclease P protein component [Propionibacterium acnes
HL067PA1]
gi|314955283|gb|EFS99688.1| putative ribonuclease P protein component [Propionibacterium acnes
HL027PA1]
gi|314959156|gb|EFT03258.1| putative ribonuclease P protein component [Propionibacterium acnes
HL002PA1]
gi|314975196|gb|EFT19291.1| putative ribonuclease P protein component [Propionibacterium acnes
HL053PA1]
gi|314985205|gb|EFT29297.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA1]
gi|315078991|gb|EFT51003.1| putative ribonuclease P protein component [Propionibacterium acnes
HL053PA2]
gi|315081499|gb|EFT53475.1| putative ribonuclease P protein component [Propionibacterium acnes
HL078PA1]
gi|315097164|gb|EFT69140.1| putative ribonuclease P protein component [Propionibacterium acnes
HL038PA1]
gi|315099344|gb|EFT71320.1| putative ribonuclease P protein component [Propionibacterium acnes
HL059PA2]
gi|315102315|gb|EFT74291.1| putative ribonuclease P protein component [Propionibacterium acnes
HL046PA1]
gi|315109868|gb|EFT81844.1| putative ribonuclease P protein component [Propionibacterium acnes
HL030PA2]
gi|327332498|gb|EGE74233.1| ribonuclease P protein component [Propionibacterium acnes HL096PA2]
gi|327448833|gb|EGE95487.1| putative ribonuclease P protein component [Propionibacterium acnes
HL043PA1]
gi|327454250|gb|EGF00905.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA3]
gi|327457416|gb|EGF04071.1| putative ribonuclease P protein component [Propionibacterium acnes
HL092PA1]
gi|328756008|gb|EGF69624.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA1]
gi|328758851|gb|EGF72467.1| putative ribonuclease P protein component [Propionibacterium acnes
HL025PA2]
gi|328759809|gb|EGF73400.1| ribonuclease P protein component [Propionibacterium acnes HL099PA1]
Length = 85
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 7 RSDLDVTPRVGFVVSKTVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|332296675|ref|YP_004438597.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
gi|332179778|gb|AEE15466.1| Ribonuclease P protein component [Treponema brennaborense DSM
12168]
Length = 120
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ +K+ + K G+ + VL NN R+ FT+ + G AVERNR
Sbjct: 12 TREERIKRSADIQNLFKTGKRVGVSGAKMFVLPNNTDKN--RIAFTLPRGYGNAVERNRS 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +EA R + L G+D + + F+ C F ++
Sbjct: 70 KRVSREAYR-YFKAFLNTGYDMIFLVYPG--NDSFRTRCAQFRYLCQKA 115
>gi|126643004|ref|YP_001085988.1| RNase P [Acinetobacter baumannii ATCC 17978]
Length = 102
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 4/94 (4%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
P F L R+G V KK A ERNR++R +E+ RL D
Sbjct: 2 HQPHFL--FLAKLTEQPNSRLGIVVAKKKVRRAHERNRIKRLARESFRLHQPKFG-SDID 58
Query: 82 YVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
V++ K I EL ++ +R
Sbjct: 59 VVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK 92
>gi|269122889|ref|YP_003305466.1| ribonuclease P protein component [Streptobacillus moniliformis DSM
12112]
gi|268314215|gb|ACZ00589.1| ribonuclease P protein component [Streptobacillus moniliformis DSM
12112]
Length = 109
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ L+K ++F V KG+ G + + + R+GF +KK G +V R+R +R
Sbjct: 1 MEKLRKSKEFNRVYNKGKKLSGKYILIF----EYNAKSQRLGFVASKKTGNSVYRSRAKR 56
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIPFKELCNHFVERVRRNKR 111
L+EA RL + + +YVL+AK I ++++ +R K
Sbjct: 57 LLREAARLNI-DLFRLDKEYVLVAKSIFKDKMKEIKYQDIEQDLKNIFKRKKN 108
>gi|226326923|ref|ZP_03802441.1| hypothetical protein PROPEN_00783 [Proteus penneri ATCC 35198]
gi|225204760|gb|EEG87114.1| hypothetical protein PROPEN_00783 [Proteus penneri ATCC 35198]
Length = 84
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 34 NNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
N PR+G T+ K A ERNR++R +E RL + D+VL+ ++
Sbjct: 3 RQNELGHPRIGLTIAKKNVKRAHERNRIKRLAREYFRLHQHEL--PPMDFVLLVRKGVAE 60
Query: 93 IPFKELCNHFVERVRRNKRSYYSG 116
+ +L + RR+ R
Sbjct: 61 LDNHQLTEVLGKLWRRHCRLAQKS 84
>gi|291556191|emb|CBL33308.1| ribonuclease P protein component, eubacterial [Eubacterium siraeum
V10Sc8a]
Length = 129
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + K G+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYARESK--RRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR ++EA RL + +D++ +A+ + E+ +++ KR
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLWMEKQL--MKRYATPAN 121
Query: 118 NFSRK 122
N K
Sbjct: 122 NQPDK 126
>gi|330470831|ref|YP_004408574.1| ribonuclease P protein component [Verrucosispora maris AB-18-032]
gi|328813802|gb|AEB47974.1| ribonuclease P protein component [Verrucosispora maris AB-18-032]
Length = 137
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 21/137 (15%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN--------------------NSNLL 40
++ L++ FA + R G + L NS +
Sbjct: 2 LTAAQRLRRSSDFAAAVRSGRRAGRGTVVVHLTLPDTTGGTPDVAPEPVRGGTEENSAPV 61
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
R GF V+K G AV RN++RRRL+ VR + G V+ A A ++ L
Sbjct: 62 SRAGFVVSKAVGPAVVRNKVRRRLRHLVRERLSEL-PAGSTLVVRALPAAAEATYQRLGA 120
Query: 101 HFVERVRRNKRSYYSGK 117
+ +R + S +
Sbjct: 121 DLGDALRAARTSRGRRR 137
>gi|296167145|ref|ZP_06849552.1| ribonuclease P protein component [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897467|gb|EFG77066.1| ribonuclease P protein component [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 113
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 7 LKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNL--LPRVGFTVTKKQGCAVERNRMRRR 63
+++ +F VK G + + + + P +G V K G AV+R+R+ RR
Sbjct: 1 MRRSTEFDATVKHGARAAQRDIVVHLRRAGDRDGSTPPHLGLIVGKSVGSAVDRHRVSRR 60
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
L+ R + V+ A + L +RR
Sbjct: 61 LRHVARSVLGDLHDSD-QVVIRALPGSRTASSGRLAEQLRRGLRRA 105
>gi|291541860|emb|CBL14970.1| ribonuclease P protein component, eubacterial [Ruminococcus bromii
L2-63]
Length = 113
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
MS LK R F+ + +G+ GP VL N + N R G T KK G AV R R
Sbjct: 1 MSEYITLKDNRDFSGLYRRGKSFVGPVLVTYVLKNKSDN--LRFGITTGKKIGKAVRRTR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RR ++EA + K G+D+V +A+ ++ + +++
Sbjct: 59 SRRVIREAYYKLYPDI-KKGYDFVFVARGKTPYVKSTVVYKEMKKQL 104
>gi|312142026|ref|YP_004009362.1| ribonuclease p protein component [Rhodococcus equi 103S]
gi|325677523|ref|ZP_08157187.1| ribonuclease P protein component [Rhodococcus equi ATCC 33707]
gi|311891365|emb|CBH50686.1| ribonuclease P protein component [Rhodococcus equi 103S]
gi|325551770|gb|EGD21468.1| ribonuclease P protein component [Rhodococcus equi ATCC 33707]
Length = 102
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 25 PFFSLEVLNNNNSN-----LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
+ ++ PR G V+K G AV R+R+ RR + + +
Sbjct: 4 RDLVVHARERGATDTLVSIDGPRFGLVVSKAVGPAVIRHRVARRFRHICAGLVDTL-PVD 62
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
D V+ A + +EL +RR
Sbjct: 63 TDVVIRALPGSATATSRELDKQLRSVLRRM 92
>gi|296314153|ref|ZP_06864094.1| ribonuclease P protein component [Neisseria polysaccharea ATCC
43768]
gi|296839187|gb|EFH23125.1| ribonuclease P protein component [Neisseria polysaccharea ATCC
43768]
Length = 121
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRKRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 109
>gi|255066613|ref|ZP_05318468.1| ribonuclease P protein component [Neisseria sicca ATCC 29256]
gi|255049197|gb|EET44661.1| ribonuclease P protein component [Neisseria sicca ATCC 29256]
Length = 112
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V + R+ + +N PR+G V+KK A ERN M+
Sbjct: 7 KQYRLLKTDDFSSVFAFKNRRSRDLLQVSQSADNGLNHPRLGLVVSKKTAKRAHERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +++ RL + HD+V+ + E N + +R+
Sbjct: 67 RVIRDWFRLNKNSL--PPHDFVVRVRLAFNRQNAAEARNQLAQLMRK 111
>gi|315605510|ref|ZP_07880547.1| ribonuclease P protein component [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312777|gb|EFU60857.1| ribonuclease P protein component [Actinomyces sp. oral taxon 180
str. F0310]
Length = 117
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ + F + R G + + + VGF V K++ A RNR
Sbjct: 2 LPRAHRMVDPADFTAAIRHGARAGDPLVVVHVRADEERNSRLVGFVVPKREIKRANGRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
++R+L+ +R + + G V+ A +L + KEL H + + R
Sbjct: 62 VKRQLRHLMRERIDNL-PEGSRVVVRASGRSLGVSSKELGAHLDRVMSKAWRK 113
>gi|323694898|ref|ZP_08109048.1| ribonuclease P [Clostridium symbiosum WAL-14673]
gi|323500988|gb|EGB16900.1| ribonuclease P [Clostridium symbiosum WAL-14673]
Length = 89
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
R+G +V+KK G +V R+ + R ++E+ RL + +K G D V++A+ A
Sbjct: 5 KTEREDTRIGISVSKKVGNSVVRHHITRLVRESYRLN-KDRVKTGLDIVVVARAAAKESD 63
Query: 95 FKELCNHFVER 105
FK++ + ++
Sbjct: 64 FKKIESAYLHL 74
>gi|261363927|ref|ZP_05976810.1| ribonuclease P protein component [Neisseria mucosa ATCC 25996]
gi|288567940|gb|EFC89500.1| ribonuclease P protein component [Neisseria mucosa ATCC 25996]
Length = 112
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V + R+ + +N PR+G V+KK A +RN M+
Sbjct: 7 KQYRLLKTDDFSSVFAFKNRRSRDLLQVSQSADNGLNHPRLGLVVSKKTAKRAHDRNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +++ RL + HD+V+ + E N + +R+
Sbjct: 67 RVIRDWFRLNKNSL--PPHDFVVRVRLAFNRQNAAEARNQLAQLMRK 111
>gi|34763007|ref|ZP_00143983.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|237741006|ref|ZP_04571487.1| ribonuclease P protein component [Fusobacterium sp. 4_1_13]
gi|27887308|gb|EAA24402.1| Ribonuclease P protein component [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|229431050|gb|EEO41262.1| ribonuclease P protein component [Fusobacterium sp. 4_1_13]
Length = 111
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +K+ G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF--NKNKLEYSRFGFVASKRVGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNK 110
+E +RL + + + +IAK+ + ++++ + +K
Sbjct: 59 LFREYIRLNIDKINDNYDII-IIAKKKFGENIEILKYQDIEKDLNRIFKNSK 109
>gi|114322030|ref|YP_743713.1| ribonuclease P protein component [Alkalilimnicola ehrlichii MLHE-1]
gi|114228424|gb|ABI58223.1| ribonuclease P protein component [Alkalilimnicola ehrlichii MLHE-1]
Length = 123
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L + + + V G + +F++ L N + PR+G ++++ AV+RNR
Sbjct: 12 PRRRRLTRPQDYRRVFSGAQKAADRYFTV--LARGNDQVGPRLGLAISRRVAPRAVDRNR 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R +E R + + DYV++A+ A L R
Sbjct: 70 LKRIAREVFRQRQAALGQR--DYVVLARPAARTASKARLHRSLGRLYDRL 117
>gi|50843792|ref|YP_057019.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|50841394|gb|AAT84061.1| ribonuclease P protein component [Propionibacterium acnes
KPA171202]
gi|313806854|gb|EFS45352.1| putative ribonuclease P protein component [Propionibacterium acnes
HL087PA2]
gi|313817641|gb|EFS55355.1| putative ribonuclease P protein component [Propionibacterium acnes
HL046PA2]
gi|313821534|gb|EFS59248.1| putative ribonuclease P protein component [Propionibacterium acnes
HL036PA1]
gi|313826191|gb|EFS63905.1| putative ribonuclease P protein component [Propionibacterium acnes
HL063PA1]
gi|314926335|gb|EFS90166.1| putative ribonuclease P protein component [Propionibacterium acnes
HL036PA3]
gi|314980259|gb|EFT24353.1| putative ribonuclease P protein component [Propionibacterium acnes
HL072PA2]
gi|314987114|gb|EFT31206.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA2]
gi|314990684|gb|EFT34775.1| putative ribonuclease P protein component [Propionibacterium acnes
HL005PA3]
gi|315088013|gb|EFT59989.1| putative ribonuclease P protein component [Propionibacterium acnes
HL072PA1]
gi|315107500|gb|EFT79476.1| putative ribonuclease P protein component [Propionibacterium acnes
HL030PA1]
gi|327334555|gb|EGE76266.1| ribonuclease P protein component [Propionibacterium acnes HL097PA1]
gi|327444471|gb|EGE91125.1| putative ribonuclease P protein component [Propionibacterium acnes
HL013PA2]
gi|328757978|gb|EGF71594.1| putative ribonuclease P protein component [Propionibacterium acnes
HL020PA1]
gi|332676745|gb|AEE73561.1| ribonuclease P protein component [Propionibacterium acnes 266]
Length = 85
Score = 58.2 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 7 RSDLDVTPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|198282183|ref|YP_002218504.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667338|ref|YP_002424548.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198246704|gb|ACH82297.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519551|gb|ACK80137.1| ribonuclease P protein component [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 116
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE 73
+K+G + P + L N PR+G V++K G AV RNR++RRL+EA R +
Sbjct: 25 RTLKQGRKKVFPELVIYALRN--ELPHPRLGLAVSRKVGNAVVRNRIKRRLREAFR--QQ 80
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V G D +++A+ A + + + + + + R
Sbjct: 81 SVRTRGRDVLVVARPSARQLSMRAMGAYLQQTLER 115
>gi|269213743|ref|ZP_05982762.2| ribonuclease P protein component [Neisseria cinerea ATCC 14685]
gi|269145658|gb|EEZ72076.1| ribonuclease P protein component [Neisseria cinerea ATCC 14685]
Length = 121
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ ++ N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRKRRSRDLLQVSRSDGNGLGYPRLGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ A R + + +
Sbjct: 67 RVIRDWFRLNKNKLPPQ--DFVVRAHRKFGRDAAAQAREELAQLM 109
>gi|256833765|ref|YP_003162492.1| ribonuclease P protein component [Jonesia denitrificans DSM 20603]
gi|256687296|gb|ACV10189.1| ribonuclease P protein component [Jonesia denitrificans DSM 20603]
Length = 91
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+ VGF V+K G AV RN+++RRL+ R +L G V+ A A ++
Sbjct: 12 PDGPALVGFVVSKAVGNAVTRNKVKRRLRAITREHL-NLLHPGEVLVVRALPTAATARYE 70
Query: 97 ELCNHFVERVRRNKRSYYSG 116
L +V V + +
Sbjct: 71 LLERDYVRLVSMCRHKRGAR 90
>gi|237750450|ref|ZP_04580930.1| ribonuclease P protein component [Helicobacter bilis ATCC 43879]
gi|229373980|gb|EEO24371.1| ribonuclease P protein component [Helicobacter bilis ATCC 43879]
Length = 140
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPR--------------VGFT 46
I LK +F +V K G F ++ + + R +GF+
Sbjct: 10 KKIDTLKNSYEFDIVFKNGLRFNRDFMAIYAMPLRDFIFHLRKKKQYNRFIESKMLLGFS 69
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ KK A +RN +RRR+K ++ G+ +V I ++ F L H +
Sbjct: 70 INKKVAKACKRNLIRRRIKAVMQEYGTKYR--GYAFVFICRKGISDYDFIALKKHILYST 127
Query: 107 RRNKRSYYSGKNF 119
++ ++ +N
Sbjct: 128 KKLTQARNITENK 140
>gi|294786221|ref|ZP_06751475.1| ribonuclease P [Parascardovia denticolens F0305]
gi|294485054|gb|EFG32688.1| ribonuclease P [Parascardovia denticolens F0305]
Length = 140
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-------YVLIA 86
N +S+ +G V+K G AVERN+++RR + R + + D V+ A
Sbjct: 47 NGSSDQPIYLGLAVSKAVGHAVERNKVKRRFRVLARKYEPLLAQALKDRPGTRLSLVMRA 106
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
K +PF +L + + R
Sbjct: 107 KPQTAHVPFADLDQQVEKAFVKLVRQMNGSDGRP 140
>gi|314965759|gb|EFT09858.1| putative ribonuclease P protein component [Propionibacterium acnes
HL082PA2]
gi|314982901|gb|EFT26993.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA3]
gi|315091207|gb|EFT63183.1| putative ribonuclease P protein component [Propionibacterium acnes
HL110PA4]
gi|315094441|gb|EFT66417.1| putative ribonuclease P protein component [Propionibacterium acnes
HL060PA1]
gi|327328936|gb|EGE70696.1| ribonuclease P protein component [Propionibacterium acnes HL103PA1]
Length = 85
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ ++ PRVGF V+K G AV RNR++RRL+ R + + + G V+ A A
Sbjct: 7 RSDLDVAPRVGFVVSKAVGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQ 65
Query: 94 PFKELCNHFVERVRRNKRSYY 114
P + + R
Sbjct: 66 P-DRVAKDLDGAWHQALRKLR 85
>gi|288574741|ref|ZP_06393098.1| ribonuclease P protein component [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570482|gb|EFC92039.1| ribonuclease P protein component [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 137
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ +F +V + R + +L + R G V KKQG A R+R RR L+
Sbjct: 24 RLKRGWEFDVVFRTGSRH-KGALVRLLFIEAPDGKTRFGVVVGKKQGNACVRSRGRRVLR 82
Query: 66 EAVRLCAEGVLKHGHDYVL 84
EA R A ++ G+ +VL
Sbjct: 83 EAARRLAP-WVRPGYWFVL 100
>gi|254522055|ref|ZP_05134110.1| ribonuclease P, protein component [Stenotrophomonas sp. SKA14]
gi|219719646|gb|EED38171.1| ribonuclease P, protein component [Stenotrophomonas sp. SKA14]
Length = 121
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHD 81
P +L L ++ R+G V++K AV RNR++R L++ +R + D
Sbjct: 2 SDPLMTLHWLP---ADRPARLGLAVSRKVDPNAVGRNRIKRVLRDILRQTRTEIQPG--D 56
Query: 82 YVLIAKRDALFIPFKELCNHF 102
+V++A+ A E+ F
Sbjct: 57 FVVVARSAARSASNDEIRQAF 77
>gi|296131546|ref|YP_003638796.1| ribonuclease P protein component [Cellulomonas flavigena DSM 20109]
gi|296023361|gb|ADG76597.1| ribonuclease P protein component [Cellulomonas flavigena DSM 20109]
Length = 112
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+++ F + R G + L P VG V++ G AV RNR++RRL+
Sbjct: 1 MRRSADFQQTVRRGARGGRDTLVVHLTTTTDPGPPAVGLVVSRGVGNAVTRNRVKRRLRA 60
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
V +G+ G V+ A+ A EL R
Sbjct: 61 LVAARLDGL-PEGALVVVRAQPAAASASSVELGRDLDGAFATAGRRLERRHE 111
>gi|148274161|ref|YP_001223722.1| putative RNAse P, protein component [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|166226711|sp|A5CVC5|RNPA_CLAM3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147832091|emb|CAN03064.1| putative RNAse P, protein component [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 113
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
++ + + ++ + R ++ + R GF ++KK G AV RN +
Sbjct: 2 LARRNRVTSGADYRIIVRRGRRTTTGTAVVSALAGPDDAPTRFGFIISKKVGNAVTRNLV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RRRLK V G V+ + L V R R
Sbjct: 62 RRRLKAVSAGLLHSV-PPGTSIVIRVLPGMERTAWDTLQEEMASAVTRAVR 111
>gi|15834787|ref|NP_296546.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270284954|ref|ZP_06194348.1| ribonuclease P [Chlamydia muridarum Nigg]
gi|270288980|ref|ZP_06195282.1| ribonuclease P [Chlamydia muridarum Weiss]
gi|301336352|ref|ZP_07224554.1| ribonuclease P [Chlamydia muridarum MopnTet14]
gi|9789792|sp|Q9PLD7|RNPA_CHLMU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|8163152|gb|AAF73535.1| ribonuclease P protein component [Chlamydia muridarum Nigg]
Length = 119
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V++ G+ + +L ++ + +SN+ +VG TV+KK G A +RNR
Sbjct: 6 LPKSARLLKRKQFVYVQRCGQYCRTDQATLRIVPSRHSNIR-KVGVTVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + V+ K L F +L ++ +
Sbjct: 65 FKRIVREAFRHVRPNL--PACQVVVSPKGGTLP-NFGKLSADLLKHI 108
>gi|237756919|ref|ZP_04585391.1| ribonuclease P protein component [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690920|gb|EEP60056.1| ribonuclease P protein component [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 109
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 40/103 (38%)
Query: 9 KRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAV 68
K++ V + L V N+ K +V+RNR +R L+EAV
Sbjct: 5 KKKDIQNVFSNKQIIDNEDFLVVYLKNDQEKSRYAFVASKKNFKKSVDRNRAKRLLREAV 64
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RL + +D + IAK+ L ++ + + + K
Sbjct: 65 RLRLNLLDDLKYDMIFIAKKSILNKKVYDILSQLDTVIGKLKN 107
>gi|171920802|ref|ZP_02931986.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185178876|ref|ZP_02964649.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024418|ref|ZP_02997077.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518433|ref|ZP_03003924.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|188524210|ref|ZP_03004270.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867473|ref|ZP_03079477.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273302|ref|ZP_03205838.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554287|ref|YP_002285058.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550666|ref|ZP_03771615.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
gi|225551240|ref|ZP_03772186.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|226741398|sp|B5ZCB8|RNPA_UREU1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|171903564|gb|EDT49853.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209514|gb|EDU06557.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188018703|gb|EDU56743.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188998267|gb|EDU67364.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|195659778|gb|EDX53158.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660949|gb|EDX54202.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249822|gb|EDY74602.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541788|gb|ACI60017.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379055|gb|EEH01420.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|225379820|gb|EEH02182.1| ribonuclease P protein component [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
Length = 118
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N LK+ + KK + + N + + + KK A +RNR
Sbjct: 1 MANFISLKRNEDILNIIKKQQKIHSNHIVVYFCETNLKKVRLAISIS-KKKFKLATQRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKRSY 113
+RR +K A VL +D V++ K + F + + ++K++
Sbjct: 60 IRRLIKAWF--IAANVLVESYDIVVLVKPSFIDGSFVLNCDNIKKILQTIISKHKQNK 115
>gi|32130455|sp|Q9P9U0|RNPA_XYLFA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 135
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLC 71
+ ++G L L + R+G V+++ AV RNR++R L+E +R
Sbjct: 20 YVAFEQGRRYSSVLLRLHHLPTS---GPVRLGLVVSRRVDIRAVNRNRIKRALREVMRQI 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A ++ DYV++ ++ A + EL + +RR
Sbjct: 77 AYKLVPG--DYVVVVRQTAKDVSNAELSVALLSLLRRI 112
>gi|296436334|gb|ADH18508.1| ribonuclease P [Chlamydia trachomatis G/9768]
gi|296438193|gb|ADH20354.1| ribonuclease P [Chlamydia trachomatis G/11074]
gi|297140694|gb|ADH97452.1| ribonuclease P [Chlamydia trachomatis G/9301]
Length = 120
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQVVISPRGNS-QPNFLKLSEELLQRI 108
>gi|115372275|ref|ZP_01459585.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
gi|115370740|gb|EAU69665.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
Length = 217
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R +F V+ G+ L N R+G T++ K G AV R R+
Sbjct: 99 PKALRLLRRHEFLQVQGSGQKIPSDCLL--ALVKRNGRAHSRLGLTISSKVGNAVVRVRL 156
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RR L+E R G D VL+ + A F E+ F R+ +R
Sbjct: 157 RRLLRECFRKRRAQW-PQGLDVVLVVRASANEAAFTEVSRAFDGVTRKLQR 206
>gi|301168600|emb|CBW28190.1| Ribonuclease P protein component [Bacteriovorax marinus SJ]
Length = 121
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 11/116 (9%)
Query: 3 NICILKKRRQFALVKKG-ELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKKQGCAVERNR 59
L + F+ ++K + K + R+GF+VTKK G AV RNR
Sbjct: 8 KSYRLLSAQDFSYLRKNSKRFKSKWLMAYYKPTRIRLPESHSRIGFSVTKKVGNAVLRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE------LCNHFVERVRRN 109
+R +++ R + + G D ++I + L + F ++
Sbjct: 68 YKRIMRDMFRN--STLKEKGLDILVIVSPYITKNNSNKDDQEKCLKDSFSHLLKTL 121
>gi|218767521|ref|YP_002342033.1| ribonuclease P [Neisseria meningitidis Z2491]
gi|254804278|ref|YP_003082499.1| rnpA ribonuclease P [Neisseria meningitidis alpha14]
gi|13878725|sp|Q9JW46|RNPA_NEIMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|121051529|emb|CAM07826.1| putative ribonuclease P protein component [Neisseria meningitidis
Z2491]
gi|254667820|emb|CBA03808.1| rnpA ribonuclease P [Neisseria meningitidis alpha14]
gi|261393236|emb|CAX50859.1| ribonuclease P protein component (RNaseP protein; RNase P protein;
Protein C5) [Neisseria meningitidis 8013]
gi|308389999|gb|ADO32319.1| putative ribonuclease P protein component [Neisseria meningitidis
alpha710]
gi|319409785|emb|CBY90093.1| ribonuclease P protein component (RNaseP protein; RNase P protein;
Protein C5) [Neisseria meningitidis WUE 2594]
gi|325135496|gb|EGC58114.1| ribonuclease P protein component [Neisseria meningitidis M0579]
gi|325201460|gb|ADY96914.1| ribonuclease P protein component [Neisseria meningitidis
M01-240149]
gi|325207441|gb|ADZ02893.1| ribonuclease P protein component [Neisseria meningitidis NZ-05/33]
Length = 121
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|312728|emb|CAA78594.1| RNAse P [Bacillus subtilis subsp. subtilis str. 168]
Length = 83
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N RVG +V+KK G AV RNR++R +++A E + + DY++IA++ A +
Sbjct: 2 QPENDELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERLKEK--DYIIIARKPASQLT 59
Query: 95 FKELCNHFVERVR 107
++E R
Sbjct: 60 YEETKKSLQHLFR 72
>gi|238021630|ref|ZP_04602056.1| hypothetical protein GCWU000324_01532 [Kingella oralis ATCC 51147]
gi|237866244|gb|EEP67286.1| hypothetical protein GCWU000324_01532 [Kingella oralis ATCC 51147]
Length = 115
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L +F+ V ++ F + + NN+ R+G V KK A +RN M+
Sbjct: 7 KAYRLLTTEEFSSVFALRKQRSRSFLAVLQSENNALGHARLGLVVGKKAAKRANKRNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E RL + + D+V+ + + E+C E +
Sbjct: 67 RVIREWFRLHRQEL--PAKDFVVRVRVMFGRGQYHEVCQQLAELM 109
>gi|148261130|ref|YP_001235257.1| ribonuclease P protein component [Acidiphilium cryptum JF-5]
gi|326404531|ref|YP_004284613.1| ribonuclease P protein component [Acidiphilium multivorum AIU301]
gi|146402811|gb|ABQ31338.1| ribonuclease P protein component [Acidiphilium cryptum JF-5]
gi|325051393|dbj|BAJ81731.1| ribonuclease P protein component [Acidiphilium multivorum AIU301]
Length = 120
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
L +R F G F +++L R+G T ++K G AV RNR RR
Sbjct: 6 FQSLPQRADFLRAAAHGRKAAREGFVVQILL-TMPGAPVRLGLTASRKVGNAVIRNRARR 64
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RL+ R G D VLIA++ F L F +
Sbjct: 65 RLRALAREELRHRSVSGADIVLIARKGTATAEFSSLRADFRAVL 108
>gi|21672308|ref|NP_660375.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|266949|sp|P29433|RNPA_BUCAP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|144147|gb|AAA73147.1| rnpA [Buchnera aphidicola]
gi|2827012|gb|AAC38104.1| RNase P protein component [Buchnera aphidicola]
gi|21622907|gb|AAM67586.1| ribonuclease P protein component [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 114
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
F V F + +L +N PR+G ++++K A RN+++R ++E RL
Sbjct: 18 FQYVFSNP-CNKNTFHINILGRSNLLGHPRLGLSISRKNIKHAYRRNKIKRLIRETFRLL 76
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++ D+V+IAK++ +++ K++ N
Sbjct: 77 QHRLI--SMDFVVIAKKNIVYLNNKKIVNILEYIW 109
>gi|226229340|ref|YP_002763446.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
gi|226092531|dbj|BAH40976.1| ribonuclease P protein component [Gemmatimonas aurantiaca T-27]
Length = 106
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 40 LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
RVGF V + + AV RNR++RRL+E VRL D VL A PF+ L
Sbjct: 17 FARVGFVVPRYKHSAVARNRLKRRLRELVRLYVLP-TAPACDVVLRVVPSAYDRPFEALR 75
Query: 100 NHFVERVRRNKR 111
+ R R
Sbjct: 76 EEVQQLAARLAR 87
>gi|304388451|ref|ZP_07370557.1| ribonuclease P protein component [Neisseria meningitidis ATCC
13091]
gi|304337568|gb|EFM03731.1| ribonuclease P protein component [Neisseria meningitidis ATCC
13091]
Length = 121
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 109
>gi|325127480|gb|EGC50409.1| ribonuclease P protein component [Neisseria meningitidis N1568]
Length = 121
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 109
>gi|304313415|ref|YP_003813013.1| Ribonuclease P protein component [gamma proteobacterium HdN1]
gi|301799148|emb|CBL47391.1| Ribonuclease P protein component [gamma proteobacterium HdN1]
Length = 133
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
S L +++++ V F + N++ K +V RNR
Sbjct: 7 SRELRLTQKKEYDQVFAHASFKFGCAQFLVLASFRNDALPARLGLVASKKHLKNSVNRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
+R+ +E+ R +L G D V++++ AL E+ + + + +
Sbjct: 67 FKRQARESFR--KGQMLLTGCDIVVLSRTQALDAN--EIPSQLDQIWLKLAKKR 116
>gi|227494187|ref|ZP_03924503.1| ribonuclease P [Actinomyces coleocanis DSM 15436]
gi|226831921|gb|EEH64304.1| ribonuclease P [Actinomyces coleocanis DSM 15436]
Length = 114
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 2/104 (1%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAE 73
+++G + + VGF V K A +RN +RRL+ +R E
Sbjct: 2 AMRRGVHAGNHALVAHAVTGEDFPKESLVGFVVPKKVFKRANQRNLAKRRLRHLMRDRVE 61
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+ V+ A + EL + + + R
Sbjct: 62 QL-PAHTLLVIRVLPGAQTADYSELQHSLDKALTRVIAKLNPES 104
>gi|330813523|ref|YP_004357762.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486618|gb|AEA81023.1| ribonuclease P protein component [Candidatus Pelagibacter sp.
IMCC9063]
Length = 119
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 6/111 (5%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR---VGFTVTKKQGCAVERNR 59
L +F + K + F++ R + KK G AV+RN+
Sbjct: 6 QFESLSGNTEFKQILKSKKIISKLFTIYYRKLEQELSNNRKVVLSCVSAKKLGNAVKRNK 65
Query: 60 MRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+RRRLK A R + + Y + AK F+ L + +
Sbjct: 66 IRRRLKMATRKAIVELSSSFNKKYKYAIFAKAKVYDENFQNLVEELKSKFK 116
>gi|255994569|ref|ZP_05427704.1| ribonuclease P protein component [Eubacterium saphenum ATCC 49989]
gi|255993282|gb|EEU03371.1| ribonuclease P protein component [Eubacterium saphenum ATCC 49989]
Length = 114
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M + IL+K+ +F+ + KG+ + + + N R F +KK G +VERNR
Sbjct: 1 MLDKTILRKQNEFSKIYNKGKTITSEYVVVFYIKNELGYN--RRAFIASKKIGNSVERNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA--LFIPFKELCNHFVERV 106
RR ++E R ++ K DY+ +AKR ++ + +
Sbjct: 59 ARRLIREFYRKNSDN-FKKSCDYIFVAKRKMILKKAKSHDVEKSLTKVL 106
>gi|256846680|ref|ZP_05552136.1| ribonuclease P [Fusobacterium sp. 3_1_36A2]
gi|256717900|gb|EEU31457.1| ribonuclease P [Fusobacterium sp. 3_1_36A2]
Length = 111
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
+ LKK +F + G G + + N N R GF +K+ G A RNR++R
Sbjct: 1 MNTLKKNGEFQNIYNLGNKYFGSYSLIFF--NKNKLEYSRFGFVASKRVGKAFCRNRIKR 58
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAK---RDALFIPFKELCNHFVERVRRNK 110
+E +RL + + + ++ K + + ++++ + +K
Sbjct: 59 LFREYIRLNIDKINDNYDIIIIAKKKIGENIEILKYQDIEKDLNRIFKNSK 109
>gi|167750240|ref|ZP_02422367.1| hypothetical protein EUBSIR_01214 [Eubacterium siraeum DSM 15702]
gi|167656802|gb|EDS00932.1| hypothetical protein EUBSIR_01214 [Eubacterium siraeum DSM 15702]
Length = 129
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + K G+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYARESK--RRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR ++EA RL + +D++ +A+ + E+ +++ KR
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLRMEKQL--LKRYAAPAN 121
Query: 118 NFSRK 122
N K
Sbjct: 122 NQPDK 126
>gi|114332117|ref|YP_748339.1| ribonuclease P protein component [Nitrosomonas eutropha C91]
gi|122313201|sp|Q0AE58|RNPA_NITEC RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|114309131|gb|ABI60374.1| ribonuclease P protein component [Nitrosomonas eutropha C91]
Length = 121
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRK-GPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERN 58
+ C L+K +F V + L + ++ R+G V K + AV RN
Sbjct: 9 LPKSCRLRKADEFRAVLRHRTVFESLSLRLHIKLKPINDGYARIGLIVAKKIERKAVRRN 68
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R++R ++EA R + + G D V+ +R + V + + R
Sbjct: 69 RIKRLIREAFRKHRQ--VVQGMDCVMQLRRSVEPSDSARIYQEAVTLLHKAARQL 121
>gi|154508236|ref|ZP_02043878.1| hypothetical protein ACTODO_00730 [Actinomyces odontolyticus ATCC
17982]
gi|293191010|ref|ZP_06609054.1| ribonuclease P protein component [Actinomyces odontolyticus F0309]
gi|153797870|gb|EDN80290.1| hypothetical protein ACTODO_00730 [Actinomyces odontolyticus ATCC
17982]
gi|292820697|gb|EFF79663.1| ribonuclease P protein component [Actinomyces odontolyticus F0309]
Length = 110
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 10 RRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAV 68
F + R G + + + VGF V K++ A RNR++R+L+ +
Sbjct: 4 PADFTAAIRQGTRAGDPLVVVHVRADEERNSRLVGFVVPKREIKRANGRNRVKRQLRHLM 63
Query: 69 RLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
R + G V+ A AL +P KEL H + R R
Sbjct: 64 RERIADL-PKGARVVVRASSKALGVPSKELGEHLDRVMARAWRK 106
>gi|76789526|ref|YP_328612.1| ribonuclease P [Chlamydia trachomatis A/HAR-13]
gi|237803214|ref|YP_002888408.1| ribonuclease P [Chlamydia trachomatis B/Jali20/OT]
gi|237805135|ref|YP_002889289.1| ribonuclease P [Chlamydia trachomatis B/TZ1A828/OT]
gi|123606588|sp|Q3KKQ8|RNPA_CHLTA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|76168056|gb|AAX51064.1| ribonuclease P protein component [Chlamydia trachomatis A/HAR-13]
gi|231273435|emb|CAX10350.1| ribonuclease P protein component [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274448|emb|CAX11243.1| ribonuclease P protein component [Chlamydia trachomatis
B/Jali20/OT]
Length = 120
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ L KR+QF V + G + +L V+ + +SN +VG TV+KK G A +RNR
Sbjct: 6 LPKNARLLKRKQFVYVQRNGRCCRADQVTLRVVPSRHSNTR-KVGITVSKKFGKAHQRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++EA R + G V+ + ++ F +L ++R+
Sbjct: 65 FKRIVREAFRHVRPNL--PGCQAVISPRGNS-QPDFLKLSEELLQRI 108
>gi|15677736|ref|NP_274899.1| ribonuclease P [Neisseria meningitidis MC58]
gi|13878726|sp|Q9JXS6|RNPA_NEIMB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|7227162|gb|AAF42235.1| ribonuclease P protein component [Neisseria meningitidis MC58]
gi|325133544|gb|EGC56207.1| ribonuclease P protein component [Neisseria meningitidis M13399]
gi|325143616|gb|EGC65935.1| ribonuclease P protein component [Neisseria meningitidis
M01-240013]
gi|325200957|gb|ADY96412.1| ribonuclease P protein component [Neisseria meningitidis H44/76]
gi|325206812|gb|ADZ02265.1| ribonuclease P protein component [Neisseria meningitidis
M04-240196]
Length = 121
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 109
>gi|108945892|gb|ABG23482.1| RnpA [Sulfurihydrogenibium azorense]
Length = 111
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 9 KRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKE 66
K++ V + G +F L N PR F +KK + +RNR++R L+E
Sbjct: 7 KKKDIQEVFETGNKINSRYFYLVFKKN--QIGYPRFAFIASKKIFKKSTQRNRVKRLLRE 64
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
VRL + D +L+ K + L + +L +F+ + + +R
Sbjct: 65 VVRLLLPKLNVLSCDIILVGKSEILNLKSFQLKENFISILEKLER 109
>gi|296112229|ref|YP_003626167.1| ribonuclease P protein component [Moraxella catarrhalis RH4]
gi|295921809|gb|ADG62160.1| ribonuclease P protein component [Moraxella catarrhalis RH4]
gi|326561741|gb|EGE12076.1| ribonuclease P protein component [Moraxella catarrhalis 7169]
gi|326569038|gb|EGE19107.1| ribonuclease P protein component [Moraxella catarrhalis BC1]
gi|326571727|gb|EGE21740.1| ribonuclease P protein component [Moraxella catarrhalis BC8]
gi|326571818|gb|EGE21824.1| ribonuclease P protein component [Moraxella catarrhalis BC7]
gi|326574359|gb|EGE24302.1| ribonuclease P protein component [Moraxella catarrhalis CO72]
Length = 137
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L F V ++K L L R+G + KK AV+RN++
Sbjct: 23 QKYHRLLIPADFKAVFDSPVKKVHTLHLLAFIGQGQGLSARLGLAITKKKLKKAVDRNQL 82
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E R + D V+I K F ++ E + +
Sbjct: 83 KRLCRENFRHRQASWV--AIDVVVIVKAG-YPREF-DIATEVTELFNKINK 129
>gi|317133708|ref|YP_004093022.1| ribonuclease P protein component [Ethanoligenens harbinense YUAN-3]
gi|315471687|gb|ADU28291.1| ribonuclease P protein component [Ethanoligenens harbinense YUAN-3]
Length = 148
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N L + R F + +G P L N R+G T +KK G AV RNR
Sbjct: 37 MQNTISLTENRDFRRLYHRGRSMVHPCLVLYYARNR--LGCNRIGITTSKKIGKAVARNR 94
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RR ++E+ R K G D V +A+ + ++ +
Sbjct: 95 ARRIIRESYRQLEPA-TKTGWDLVFVARTRTVGCKMGDVLRVMGGMFK 141
>gi|303276464|ref|XP_003057526.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461878|gb|EEH59171.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 344
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQ-GCAVERNRM 60
LK + F V+ G G ++ + + R+G KK AV+RN +
Sbjct: 165 ERLKTQADFTRVQNTGRSFNGKLVRIKWCDTTDVPDVDNTRLGIKAPKKLLRRAVDRNSV 224
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+RR+++ R E D ++ DAL P+ ++ +
Sbjct: 225 KRRVRDIFRKNKEAW-PSTCDMLVFCGEDALRAPYADVKAEML 266
>gi|284049401|ref|YP_003399740.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
gi|283953622|gb|ADB48425.1| ribonuclease P protein component [Acidaminococcus fermentans DSM
20731]
Length = 112
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ +K +F V KG + VL + N ++G V K+ G AV RN++
Sbjct: 4 TQANRVKAHGRFQEVYEKGRSFADRYGVFYVLPSANGQN--QLGTAVGKRLGHAVLRNQV 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR++E R + K H V +A+ P+ F R+
Sbjct: 62 KRRMREVFRKEQARL-KGKHAIVWVARHRLAHAPYAVYEEVFRRLARKA 109
>gi|13358168|ref|NP_078442.1| ribonuclease p - protein component [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|167971173|ref|ZP_02553450.1| ribonuclease P protein component [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|168282007|ref|ZP_02689674.1| ribonuclease P protein component [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|168308154|ref|ZP_02690829.1| ribonuclease P protein component [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|170761951|ref|YP_001752688.1| ribonuclease P protein component [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|9789794|sp|Q9PPN6|RNPA_UREPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043751|sp|B1AJP4|RNPA_UREP2 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|11357022|pir||G82871 ribonuclease p protein component UU603 [imported] - Ureaplasma
urealyticum
gi|6899614|gb|AAF31017.1|AE002158_15 ribonuclease p - protein component [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827528|gb|ACA32790.1| ribonuclease P protein component [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171902587|gb|EDT48876.1| ribonuclease P protein component [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|182676103|gb|EDT88008.1| ribonuclease P protein component [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|186701163|gb|EDU19445.1| ribonuclease P protein component [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 113
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M+N LKK +KK + + N N+ + + KK A +RNR
Sbjct: 1 MANFISLKKNEDILDTIKKQQKIHSNQIVVYFRKTNLKNVRLAISIS-KKKFKLATQRNR 59
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+RR +K A + +D V++ K + F CN+ ++R
Sbjct: 60 IRRLIKAWF--IAADIPIKSYDIVVLVKPSFIDGSFVLNCNNLKIILQRIINKEKR 113
>gi|213865388|ref|ZP_03387507.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
Length = 87
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 31 VLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
+L NS PR+G TV +K A ERNR++R +E+ RL + D+V++AK+
Sbjct: 3 ILGRLNSLGHPRIGLTVARKIVRRAHERNRIKRLTRESFRLRQHEL--PAMDFVVVAKKG 60
Query: 90 ALFIPFKELCNHFVERVRRNKRSYYSG 116
+ + L + RR+ R
Sbjct: 61 VADLDNRALSEALEKLWRRHCRLARGS 87
>gi|291531379|emb|CBK96964.1| ribonuclease P protein component, eubacterial [Eubacterium siraeum
70/3]
Length = 129
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+KK ++F + K G+ F + + R+G KK G AV+R+R
Sbjct: 6 KKYVCIKKDKEFRFLFKKGDSIVTDAFVCYARESK--RRVNRIGIVTGKKVGNAVKRSRA 63
Query: 61 RRRLKEAVRLC---AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR ++EA RL + +D++ +A+ + E+ +++ KR
Sbjct: 64 RRVIREAFRLIEPLLREKTQKRYDFIFVARAKTPAMKSTEVYLRMGKQL--LKRYATPAN 121
Query: 118 NFSRK 122
N K
Sbjct: 122 NQPDK 126
>gi|269214505|ref|ZP_05986708.2| ribonuclease P protein component [Neisseria lactamica ATCC 23970]
gi|269209660|gb|EEZ76115.1| ribonuclease P protein component [Neisseria lactamica ATCC 23970]
gi|309379510|emb|CBX21876.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 123
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ F ++ N PR+G V KK A ERN M+
Sbjct: 9 RQYRLLKTDDFSSVFAFRNRRSLDFLQVARSDGNGAGHPRLGLVVGKKTAKRANERNYMK 68
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R ++ + +
Sbjct: 69 RVIRDWFRLNKNNLPPQ--DFVVRVRRKFDRDTARQARSELARLM 111
>gi|153007345|ref|YP_001381670.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
gi|152030918|gb|ABS28686.1| ribonuclease P protein component [Anaeromyxobacter sp. Fw109-5]
Length = 170
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++G + L++ PR+G TV+ K AVERNR++R ++E R +
Sbjct: 76 QRGTRLYAGDVLVLALDSR--GTRPRIGITVSSKIANAVERNRVKRWVREEFRAMQGDL- 132
Query: 77 KHGHDYVLIAKRDALFIPFKEL 98
+ V+IA+ L E+
Sbjct: 133 -PAVNLVVIARAGVLAAGRAEV 153
>gi|330835989|ref|YP_004410630.1| Ribonuclease P protein component [Spirochaeta coccoides DSM
17374]
gi|329747892|gb|AEC01248.1| Ribonuclease P protein component [Spirochaeta coccoides DSM
17374]
Length = 116
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ I+KKR + + K G+ P L V N N R+ +K G +V+RNR
Sbjct: 5 LTKKEIVKKRPEIDRIFKAGKKFSCPGIRLLVCPNQLENN--RIVVIPVRKYGNSVQRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+RR++KE R + + G+D+ I
Sbjct: 63 IRRQVKEIWRQEKPQM-QSGYDFAFIVYPGKTTA 95
>gi|258541761|ref|YP_003187194.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256632839|dbj|BAH98814.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01]
gi|256635896|dbj|BAI01865.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-03]
gi|256638951|dbj|BAI04913.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-07]
gi|256642005|dbj|BAI07960.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-22]
gi|256645060|dbj|BAI11008.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-26]
gi|256648115|dbj|BAI14056.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-32]
gi|256651168|dbj|BAI17102.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654159|dbj|BAI20086.1| ribonuclease P [Acetobacter pasteurianus IFO 3283-12]
Length = 126
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 2 SNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ LKKR+QF +G P L++ +++ + RVGFTVTKK G +V RNR+
Sbjct: 15 ARSLRLKKRKQFLFLASRGRKAPVPGLVLQLFRRPDAD-VARVGFTVTKKVGNSVVRNRV 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RRRL+E VR+ +G D VLI + + PF L F + +
Sbjct: 74 RRRLREVVRIVEADTPLNGLDLVLIGRGATINRPFTALVADFRKAL 119
>gi|121634187|ref|YP_974432.1| ribonuclease P [Neisseria meningitidis FAM18]
gi|166226728|sp|A1KS00|RNPA_NEIMF RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|120865893|emb|CAM09629.1| putative ribonuclease P protein component [Neisseria meningitidis
FAM18]
gi|325131543|gb|EGC54250.1| ribonuclease P protein component [Neisseria meningitidis M6190]
gi|325139202|gb|EGC61748.1| ribonuclease P protein component [Neisseria meningitidis ES14902]
Length = 121
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ +N N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ R K+ + +
Sbjct: 67 RVIRDWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 109
>gi|115252809|emb|CAK98245.1| putative ribonuclease p protein component [Spiroplasma citri]
Length = 109
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 2 SNICILKKRRQFALVKKGELR--KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
I+KK +F + P+F N R G +V KK G AV RN+
Sbjct: 6 KKKFIVKKNYEFQKIINNRFFIKTNPYFI---YFKRNDLNYHRFGISVGKKLGNAVVRNK 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++R+++ L + +D ++I ++ + +++++
Sbjct: 63 VKRQIRSM--LNFDFSATESYDQIIIVRKSYFSNSYLINKEILLKQIK 108
>gi|329114455|ref|ZP_08243217.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
gi|326696531|gb|EGE48210.1| Ribonuclease P protein component [Acetobacter pomorum DM001]
Length = 127
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 2 SNICILKKRRQFAL-VKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+ LKKR+QF +G P L++ +++ + RVGFTVTKK G +V RNR+
Sbjct: 16 ARSLRLKKRKQFLFLASRGRKAPVPGLVLQLFRRPDTD-VARVGFTVTKKVGNSVVRNRV 74
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
RRRL+E VR+ +G D VLI + + PF L F + +
Sbjct: 75 RRRLREVVRIVEADTPLNGLDLVLIGRSATINRPFVALVADFRKALA 121
>gi|288957362|ref|YP_003447703.1| ribonuclease P protein [Azospirillum sp. B510]
gi|288909670|dbj|BAI71159.1| ribonuclease P protein [Azospirillum sp. B510]
Length = 128
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSN------LLPRVGFTVTKKQGCAV 55
+ L +R +F V P L+V +++ R+G T ++K G AV
Sbjct: 7 RVGRLMRRPEFLAVAGTRRKHVAPGLILQVRRHDDKQRPADGGPPIRLGLTASRKVGNAV 66
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR RRRL+EA R GHD+VL+A+ D P+ +L ++R
Sbjct: 67 VRNRARRRLREAARQILSVHAAPGHDFVLVARGDTAERPWTDLLGDLTAGLKRL 120
>gi|317494665|ref|ZP_07953077.1| ribonuclease P [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917267|gb|EFV38614.1| ribonuclease P [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 81
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 36 NSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N+ PR+G TV K A ERNR++R +E+ RL + D+V+IAK+ +
Sbjct: 2 NTLGHPRIGLTVAKKYVKRAHERNRIKRLTRESFRLSQHSL--PAMDFVVIAKKGVQELD 59
Query: 95 FKELCNHFVERVRRNKRSYY 114
+ L + RR+ R
Sbjct: 60 NRALTEILEKLWRRHCRQAR 79
>gi|313669123|ref|YP_004049407.1| ribonuclease P protein component [Neisseria lactamica ST-640]
gi|313006585|emb|CBN88050.1| putative ribonuclease P protein component [Neisseria lactamica
020-06]
Length = 121
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ F ++ N PR+G V KK A ERN M+
Sbjct: 7 RQYRLLKTDDFSSVFAFRNRRSLDFLQVARSDGNGAGHPRLGLVVGKKTAKRANERNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R +++ RL + D+V+ +R ++ + +
Sbjct: 67 RVIRDWFRLNKNNLPPQ--DFVVRVRRKFDRDTARQARSELARLM 109
>gi|229816994|ref|ZP_04447276.1| hypothetical protein BIFANG_02249 [Bifidobacterium angulatum DSM
20098]
gi|229785739|gb|EEP21853.1| hypothetical protein BIFANG_02249 [Bifidobacterium angulatum DSM
20098]
Length = 73
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+G V+K G AV RN ++RR + + G D VL AK A F+ L
Sbjct: 1 MGLAVSKSVGNAVTRNSVKRRFRVLASRYEHTL-PEGVDVVLRAKPSAASASFQSLDEQM 59
Query: 103 VERVRRNKRSYYSG 116
+
Sbjct: 60 ATGFEAVALKLHQD 73
>gi|283851182|ref|ZP_06368465.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
gi|283573351|gb|EFC21328.1| ribonuclease P protein component [Desulfovibrio sp. FW1012B]
Length = 89
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF--IPFKELCNHF 102
++KK G AV RNR++R L+E RL A G D V++AK+ + F + C
Sbjct: 1 MAISKKVGNAVARNRVKRVLRECFRLAAPG-AVGALDIVVVAKKSLDPGLLTFDQACRDL 59
Query: 103 VERVRRNKRSYYSG 116
+ R + +
Sbjct: 60 LPLFGRMAKDFERP 73
>gi|239998131|ref|ZP_04718055.1| ribonuclease P [Neisseria gonorrhoeae 35/02]
gi|240013312|ref|ZP_04720225.1| ribonuclease P [Neisseria gonorrhoeae DGI18]
gi|240015757|ref|ZP_04722297.1| ribonuclease P [Neisseria gonorrhoeae FA6140]
gi|240079894|ref|ZP_04724437.1| ribonuclease P [Neisseria gonorrhoeae FA19]
gi|240112102|ref|ZP_04726592.1| ribonuclease P [Neisseria gonorrhoeae MS11]
gi|240114848|ref|ZP_04728910.1| ribonuclease P [Neisseria gonorrhoeae PID18]
gi|240117050|ref|ZP_04731112.1| ribonuclease P [Neisseria gonorrhoeae PID1]
gi|240120384|ref|ZP_04733346.1| ribonuclease P [Neisseria gonorrhoeae PID24-1]
gi|240122688|ref|ZP_04735644.1| ribonuclease P [Neisseria gonorrhoeae PID332]
gi|240124876|ref|ZP_04737762.1| ribonuclease P [Neisseria gonorrhoeae SK-92-679]
gi|240127389|ref|ZP_04740050.1| ribonuclease P [Neisseria gonorrhoeae SK-93-1035]
Length = 111
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ +R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVRRKFDRATAKQARAELAQLM 99
>gi|86607502|ref|YP_476265.1| ribonuclease P [Synechococcus sp. JA-3-3Ab]
gi|123504619|sp|Q2JQX0|RNPA_SYNJA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|86556044|gb|ABD01002.1| ribonuclease P [Synechococcus sp. JA-3-3Ab]
Length = 126
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEV--LNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
L+ RR F + + G+ R G L + + +VG + KK + +
Sbjct: 6 YRLRDRRAFQALYQAGQRRSGAGLILLFQPMPAGCEGIPSQVGLVIGKKVSKSAVKRNRL 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR + LK G+ +LI+K + L + EL +++
Sbjct: 66 RRRLREILRPLCPNLKPGYRLLLISKPNLLTYKWPELQAEVHRLLQKA 113
>gi|145353523|ref|XP_001421060.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581296|gb|ABO99353.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 164
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP--RVGFTV-TKKQGCAVERNRM 60
LK F VK+ G G + ++N N R+G V K+ AV+RN +
Sbjct: 24 ERLKTNADFDRVKREGRTYNGAHLRIRAVDNANHEPATCTRIGIVVPKKQVKRAVDRNLI 83
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+RR++ A R + D+++ AL F+ + +
Sbjct: 84 KRRIRHAFRTNKDAW-PARVDFIVFVNASALEGGFEGVRDDM 124
>gi|42525233|ref|NP_970613.1| ribonuclease P protein component [Bdellovibrio bacteriovorus HD100]
gi|39577444|emb|CAE81267.1| ribonuclease P protein component [Bdellovibrio bacteriovorus HD100]
Length = 119
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K+ +F +K+ R P L + N R G T ++K G AV RN+++R +E
Sbjct: 9 IKRSSEFLSLKQSGKRHWPTKWLLLNYQKNQVGQLRFGVTASRKTGSAVVRNKLKRWTRE 68
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNKR 111
R D LI K + +E + ++
Sbjct: 69 YFRSFLVAGQTLEADINLIFKPMEANFYKGLSHEEFVKAMDRGLETLRK 117
>gi|310825629|ref|YP_003957987.1| ribonuclease p protein component [Stigmatella aurantiaca DW4/3-1]
gi|309398701|gb|ADO76160.1| ribonuclease P protein component [Stigmatella aurantiaca DW4/3-1]
Length = 134
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L +R +F V+ G+ L N R+G T++ K G AV R R+
Sbjct: 16 PKALRLLRRHEFLQVQGSGQKIPSDCLL--ALVKRNGRAHSRLGLTISSKVGNAVVRVRL 73
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RR L+E R G D VL+ + A F E+ F R+ +R
Sbjct: 74 RRLLRECFRKRRAQW-PQGLDVVLVVRASANEAAFTEVSRAFDGVTRKLQR 123
>gi|256545948|ref|ZP_05473303.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
gi|256398370|gb|EEU11992.1| ribonuclease P protein component [Anaerococcus vaginalis ATCC
51170]
Length = 116
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN PR GF+++KK G A +RN+
Sbjct: 1 MEKQFSLRKNVDFERVYKKSKHYYNRDFTVFI--KNNGVNRPRFGFSISKKIGKANQRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++RRL+ V + I K+ +++L + + + +
Sbjct: 59 LKRRLRAIVYENYRNINNVDIII--IPKKHTTDFTYQKLKSSLGHVLSKAFKDKK 111
>gi|26554488|ref|NP_758422.1| ribonuclease P protein component [Mycoplasma penetrans HF-2]
gi|29427766|sp|Q8EU90|RNPA_MYCPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|26454498|dbj|BAC44826.1| ribonuclease P protein component [Mycoplasma penetrans HF-2]
Length = 111
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 3 NICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
+L+ ++ F+ + K + FF + NN R K AVERN++
Sbjct: 2 KDNVLRNKKDFSNLFKNKSTYYSSFFIIYAYKNN--LGWLRYAIAANKKNFKTAVERNKI 59
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+++ VR + D ++I K + F N + + +
Sbjct: 60 KRQIRSIVRGLENKNIP--VDILIIPKNNFFKTDFLNKKNDLFNLIVKIR 107
>gi|119503571|ref|ZP_01625654.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
gi|119460633|gb|EAW41725.1| ribonuclease P [marine gamma proteobacterium HTCC2080]
Length = 123
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 2 SNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
L + V + L + N R+G + KK AV+RN
Sbjct: 9 PRTARLLCAFDYTAVFETCDLRAGSKHALLLTIPNP---SHSRLGLIIAKKNVRLAVQRN 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
R++R +E R LKH D VL+AKRD + ++L F ++ R+ +
Sbjct: 66 RIKRVAREFFR---STSLKHPRDIVLLAKRDLAELDNQQLRVLFSTLWQKIDRAQKQTNH 122
Query: 119 F 119
Sbjct: 123 Q 123
>gi|110835615|ref|YP_694474.1| ribonuclease P, protein component [Alcanivorax borkumensis SK2]
gi|123050193|sp|Q0VKU6|RNPA_ALCBS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110648726|emb|CAL18202.1| ribonuclease P, protein component [Alcanivorax borkumensis SK2]
Length = 121
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 3/116 (2%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVT-KKQGCAVERNRM 60
+ L Q+ V K +L NS PR+G + K+ AV+R R+
Sbjct: 8 TRQHRLLTGPQYQTVFDQPEWKVGLGGYLLLVTRNSQPHPRLGLVIGRKRVKRAVDRARI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+RR++E R + + G D +L+ + ++ +
Sbjct: 68 KRRVREQFRCRQQELA--GLDIILLVRGRIENPNPNQVTLDITRLFDKLLAKCRQA 121
>gi|289612939|emb|CBI59987.1| unnamed protein product [Sordaria macrospora]
Length = 83
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 25 PFFSLEVLNNN-----NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P F L V + S R+G TV+KK G AV RNRM+RR + + G
Sbjct: 2 PGFVLLVRSRRADELAESPDAMRIGITVSKKVGNAVVRNRMKRRFRALAAEMLPDLGIVG 61
Query: 80 HDYVLIAKRDALFIPF 95
D+VLI + + P
Sbjct: 62 ADHVLIGRASGIERPS 77
>gi|256830918|ref|YP_003159646.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
gi|256580094|gb|ACU91230.1| ribonuclease P protein component [Desulfomicrobium baculatum DSM
4028]
Length = 87
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD-- 89
L ++ L R+G TV++K G +V RNR++R ++E RL + D V++ KR
Sbjct: 2 LEREDAGLSWRLGLTVSRKIGKSVRRNRVKRLVREYFRLHQHD-FRLCADIVVVPKRGVC 60
Query: 90 ALFIPFKELCNHFVERVRRN 109
+ ++ + + +
Sbjct: 61 VDSMDLAQVSSELGPLMTKI 80
>gi|291455690|ref|ZP_06595080.1| ribonuclease P protein component [Bifidobacterium breve DSM 20213]
gi|291382618|gb|EFE90136.1| ribonuclease P protein component [Bifidobacterium breve DSM 20213]
Length = 97
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Query: 24 GPFFSLEVLNNNNSNL-----LPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G + L N+ R+G V+K G AV RN ++RR + + E +
Sbjct: 3 GKDIIVHYLMRNDHQSDDRTTYRRLGLAVSKSVGNAVTRNTVKRRFRVLAKAHEESL-PP 61
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
D V+ AK A F L F + R
Sbjct: 62 HCDIVVRAKPSAASASFSSLDEQFATGFAKVARKAE 97
>gi|297622616|ref|YP_003704050.1| ribonuclease P protein component [Truepera radiovictrix DSM 17093]
gi|297163796|gb|ADI13507.1| ribonuclease P protein component [Truepera radiovictrix DSM 17093]
Length = 130
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPR--------VGFTVTKKQG 52
M I LK R F +++G SL + P VG V+KK G
Sbjct: 1 MPVIQSLKGDRAFQRLRRGRAGHAKLLSLRWRPLRPPSGAPAGAPVSTAFVGIVVSKKVG 60
Query: 53 CAVERNRMRRR----------LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
AV RNR+RRR EA A+G+ + V+IA+ DA + +L +
Sbjct: 61 KAVLRNRVRRRLREALRAVLACAEARANPAQGLRHPAFELVIIARPDAAEADYGQLRSAL 120
Query: 103 VERVRR 108
+R+
Sbjct: 121 EHALRK 126
>gi|269468579|gb|EEZ80228.1| RNase P protein component [uncultured SUP05 cluster bacterium]
Length = 113
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + K ++A + KG + +V+ PR+G ++KK AV+RNR
Sbjct: 5 LTREARILKAHEYAHIFKGGKLAKGSYW-QVIAKPIKKSNPRLGLAISKKVHRLAVDRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +E R + D+V++A++ L N ++ ++ +
Sbjct: 64 FKRIARETFRCEKNNL--KNWDFVVMARKS-RPAKNFILSNELIDLFKKVTK 112
>gi|225025480|ref|ZP_03714672.1| hypothetical protein EIKCOROL_02380 [Eikenella corrodens ATCC
23834]
gi|224941764|gb|EEG22973.1| hypothetical protein EIKCOROL_02380 [Eikenella corrodens ATCC
23834]
Length = 113
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V K +++ + N PR+G V KK A RN M+
Sbjct: 7 KPYRLLKTDDFSSVFALRRLKSRP-DIQLWHKPNGLGHPRLGLVVAKKTARRANRRNYMK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R L+E RL + D V+ +R +++ + V +
Sbjct: 66 RTLREWFRLNRHRLD--SSDLVVRVRRPFGKAGRQQVLAQLEQIVPK 110
>gi|212697390|ref|ZP_03305518.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325846384|ref|ZP_08169353.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|212675582|gb|EEB35189.1| hypothetical protein ANHYDRO_01960 [Anaerococcus hydrogenalis DSM
7454]
gi|325481568|gb|EGC84608.1| ribonuclease P protein component [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 116
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+K F V K F++ + NN PR GF+++KK G A +RN+
Sbjct: 1 MEKQFSLRKNVDFERVYKKSKHYYNRDFTVFI--KNNGVNRPRFGFSISKKIGKANQRNK 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
++RRL+ V + I K+ +++L + + + +
Sbjct: 59 LKRRLRAIVYDNYRNINNVDIII--IPKKHTTDFTYQKLKSSLGHVLSKAFKDKK 111
>gi|215405981|ref|ZP_03418162.1| ribonuclease P [Mycobacterium tuberculosis 02_1987]
gi|215425185|ref|ZP_03423104.1| ribonuclease P [Mycobacterium tuberculosis T92]
gi|218755715|ref|ZP_03534511.1| ribonuclease P [Mycobacterium tuberculosis GM 1503]
gi|308406289|ref|ZP_07495838.2| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
gi|308363875|gb|EFP52726.1| ribonuclease P protein component rnpA [Mycobacterium tuberculosis
SUMu012]
Length = 99
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
K G + S PRVG + K G AVER+R+ RRL+ + +
Sbjct: 2 KHGMRTVRSDMVVYWWR--GSGGGPRVGLIIAKSVGSAVERHRVARRLRHVAGSIVKELH 59
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
H V+ A + + L +RR
Sbjct: 60 PSDH-VVIRALPSSRHVSSARLEQQLRCGLRRA 91
>gi|27904527|ref|NP_777653.1| ribonuclease P protein component [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29427592|sp|P59413|RNPA_BUCBP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|27903924|gb|AAO26758.1| ribonuclease P protein component [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 114
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L F V K + +L N R+G +V++K A +RN+++
Sbjct: 8 KKRRLITPNDFNYVFKSPNVI-RCKEITILGRLNLLSFSRLGISVSRKNVKYAYQRNKIK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E R+ ++ D+V+I ++ I FK L
Sbjct: 67 RLIRENFRIIQHRLV--SSDFVVIVNSSSMQISFKLLAKKLENLW 109
>gi|325926221|ref|ZP_08187579.1| ribonuclease P protein component [Xanthomonas perforans 91-118]
gi|325543403|gb|EGD14828.1| ribonuclease P protein component [Xanthomonas perforans 91-118]
Length = 94
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
K AV RNR++R L++A+R + G DYV++A+ A ++ + FV
Sbjct: 3 VSRKVDTRAVGRNRIKRVLRDAMRHLLPELA--GGDYVIVARSAAAKATNPQIRDAFVRL 60
Query: 106 VRRN 109
+RR
Sbjct: 61 LRRA 64
>gi|196229391|ref|ZP_03128256.1| ribonuclease P protein component [Chthoniobacter flavus Ellin428]
gi|196226623|gb|EDY21128.1| ribonuclease P protein component [Chthoniobacter flavus Ellin428]
Length = 120
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L + +F +++ G+ G FF L VL N S RVGF +++ G AV RNR+
Sbjct: 7 PKSARLSRASEFQRMRREGQSFHGKFFVLSVLKNLPS-PEVRVGFITSRRVGGAVARNRV 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RRRL+E VR ++ G L+A++ A F+ L + +R+
Sbjct: 66 RRRLREIVRATRPEIM-AGTWLTLVARQAAAGATFQNLAAEWRMLAQRS 113
>gi|319760163|ref|YP_004124101.1| ribonuclease P protein component [Candidatus Blochmannia vafer str.
BVAF]
gi|318038877|gb|ADV33427.1| ribonuclease P protein component [Candidatus Blochmannia vafer str.
BVAF]
Length = 115
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+S L ++F V K + L + N PR+G ++KK A +RN
Sbjct: 6 LSKQTKLLNSKEFFSVFKAKKIIKSNGILLF-SRPNQLGFPRIGLAISKKYINRAHDRNT 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVL-IAKRDALFIPFKELCNHFVERVR 107
++R +E R+ +L D+VL I + L++ L F + +
Sbjct: 65 IKRHARETFRILQHNLL--NLDFVLTIYSKKILYLKHNNLNEEFKKLWK 111
>gi|254424787|ref|ZP_05038505.1| ribonuclease P protein component [Synechococcus sp. PCC 7335]
gi|196192276|gb|EDX87240.1| ribonuclease P protein component [Synechococcus sp. PCC 7335]
Length = 148
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 43/146 (29%)
Query: 7 LKKRRQFALV-KKGELRKGPFFSLEVLN-------------------------------- 33
+K R F+ V +KG+ ++ L
Sbjct: 1 MKSARDFSRVHRKGQRTATKHLAIRALKVKALQVKTSNKAVGGVENKSSTSSFCCGSKQG 60
Query: 34 --------NNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVL 84
+ + L P G ++++K AV RNR++R+L +R + +
Sbjct: 61 SRSASTSSHPKAVLGPHFGISISRKVSKRAVVRNRIKRQLLAIIRQYLPEID-PAWQVAI 119
Query: 85 IAKRDALFIPFKELCNHFVERVRRNK 110
+ + A+ F + +++ +
Sbjct: 120 VVRPAAVECSFDDFLRELECLLKKLE 145
>gi|332968626|gb|EGK07680.1| ribonuclease P protein component [Kingella kingae ATCC 23330]
Length = 113
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 3/105 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K +F+ V ++ + + +N R+G V KK A RN M+
Sbjct: 7 KAYRLLKTAEFSAVFALRKQRSRSLIQVLQSADNRLGYARLGLVVGKKAAKRANRRNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E RL + D+V+ + + E +
Sbjct: 67 RVIREWFRLHKSTLPPQ--DFVVRVRVAFDRETAAQARQQLAELM 109
>gi|307611887|emb|CBX01603.1| hypothetical protein LPW_32901 [Legionella pneumophila 130b]
Length = 96
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVL 76
+ F L N R+G ++KK A +RNR++R L+E+ R
Sbjct: 4 SAKKITTDDFI--FLFRENKLGYARLGLALSKKMIAKAHDRNRIKRLLRESFRHT----N 57
Query: 77 KHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
D +++A+ + + +
Sbjct: 58 LPAVDIIILARPGLAKKTNLGINTKLNKTWEKL 90
>gi|312797631|ref|YP_004030553.1| ribonuclease P protein component [Burkholderia rhizoxinica HKI 454]
gi|312169406|emb|CBW76409.1| Ribonuclease P protein component (EC 3.1.26.5) [Burkholderia
rhizoxinica HKI 454]
Length = 219
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 42/131 (32%), Gaps = 16/131 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + + F L + R+G V KKQ AV RN
Sbjct: 52 PKAARLLKTDEFSSVFRLRPWARSAHFVLYGRP---TGQAARLGVVVGKKQAPRAVTRNL 108
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF---------KELCNHFVERVRRNK 110
++R ++EA R + G D ++ F + L V R
Sbjct: 109 VKRLVREAFR--VRRLELTGWDVLIRLSGKIDRARFPSAGSAALTQMLQAQIEGLVGRAV 166
Query: 111 RSYYSGKNFSR 121
R R
Sbjct: 167 REAAHRTGGER 177
>gi|260654887|ref|ZP_05860375.1| ribonuclease P protein component [Jonquetella anthropi E3_33 E1]
gi|260630389|gb|EEX48583.1| ribonuclease P protein component [Jonquetella anthropi E3_33 E1]
Length = 131
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 2 SNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+K +F V + + +G L + + R G V K+ A R
Sbjct: 12 PKEIRLRKSWEFDTVFRTKGRLRGQLVRLLYVQAPDGK--TRWGLAVGKRLAKANGRVHG 69
Query: 61 RRRLKEAVRLCAEGVLKHGHDYV 83
RR L+EA+R ++ G V
Sbjct: 70 RRLLREAIR-RLHPWVRQGLWIV 91
>gi|118594212|ref|ZP_01551559.1| ribonuclease P [Methylophilales bacterium HTCC2181]
gi|118439990|gb|EAV46617.1| ribonuclease P [Methylophilales bacterium HTCC2181]
Length = 110
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 6/110 (5%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
L F+ V + L N+ R+GF V KK AV RN +
Sbjct: 4 KEYKLLNADDFSSVFNFRKRLSSEHIFLHYA--PNALGHFRIGFVVAKKMEKKAVRRNYI 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR ++E ++ + L D V K+ FK + ++ + R K
Sbjct: 62 RRSIREVIKREIDKSL--SVDIVFRVKKTYYRPDFKLIKRELIDLLERIK 109
>gi|307731538|ref|YP_003908762.1| ribonuclease P protein component [Burkholderia sp. CCGE1003]
gi|307586073|gb|ADN59471.1| ribonuclease P protein component [Burkholderia sp. CCGE1003]
Length = 188
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 57 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 113
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA R+ G D +L A A P K L + + +
Sbjct: 114 VRRIAREAFRVRRAEFG--GWDVLLRLHTRFDRKALPSASSPPLKALCRSEIEALLDKAA 171
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 172 REIARRQAPPAQA 184
>gi|223937848|ref|ZP_03629748.1| ribonuclease P protein component [bacterium Ellin514]
gi|223893454|gb|EEF59915.1| ribonuclease P protein component [bacterium Ellin514]
Length = 124
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
LK+ R F+ V++ R + R+G KK G AV R R RR L+
Sbjct: 16 RLKQSRDFSRVRQQGRRMPYGCLIANWMVLPPGSPMRLGVITAKKLGNAVVRARARRLLR 75
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
EA RL + + D VL+A+R + F + F+ +R+ +
Sbjct: 76 EAFRLHQHDLSQP-VDLVLVAQRTIVGKGFAAVEADFLAMLRKAR 119
>gi|113869681|ref|YP_728170.1| ribonuclease P protein component [Ralstonia eutropha H16]
gi|113528457|emb|CAJ94802.1| Ribonuclease P protein component [Ralstonia eutropha H16]
Length = 184
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ P F L V N+ R+G V KK A ERN
Sbjct: 46 PKAARLTKTDEFSSVFALRPRRRSPHFVLYVRANDRPEG--RLGVVVGKKFAPRAAERNL 103
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
++R +E R G D +L + F
Sbjct: 104 VKRMARELFR--QRREHLAGRDVLLRLQARFPRAEFA 138
>gi|323527921|ref|YP_004230074.1| ribonuclease P protein component [Burkholderia sp. CCGE1001]
gi|323384923|gb|ADX57014.1| ribonuclease P protein component [Burkholderia sp. CCGE1001]
Length = 183
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 52 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 108
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKELCN-HFVERVRRNK 110
+RR +EA RL G D +L A A P K LC + +
Sbjct: 109 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDRKALPSASSPPLKALCRGEIEALLDKAA 166
Query: 111 RSYYSGKNFSRKS 123
R + + ++
Sbjct: 167 REIARREAPAGEA 179
>gi|298369731|ref|ZP_06981048.1| ribonuclease P protein component [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282288|gb|EFI23776.1| ribonuclease P protein component [Neisseria sp. oral taxon 014 str.
F0314]
Length = 112
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K F+ V R+ + +N PR+G V KK A RN M+
Sbjct: 7 RQYRLLKTDDFSSVFALRNRRSRDLLQVSQSGDNGLNHPRLGLVVGKKAAKRANARNYMK 66
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
R +++ R + HD+V+ R + + +++
Sbjct: 67 RVIRDWFR--RHKEILPPHDFVVRVHRPFTRENAADAREQLAQLMKK 111
>gi|270158406|ref|ZP_06187063.1| ribonuclease P protein component [Legionella longbeachae D-4968]
gi|269990431|gb|EEZ96685.1| ribonuclease P protein component [Legionella longbeachae D-4968]
Length = 96
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHG 79
F + NN R+G ++KK A +RNR++R L+E+ R
Sbjct: 7 KIVTSEFIILYRKNN--LGYARLGLALSKKMIAKAHDRNRIKRLLRESFRYEE----LPS 60
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
D + +A++ + + ++
Sbjct: 61 VDIIFLARQGVAKQTNANINARLGKTWKKL 90
>gi|186477844|ref|YP_001859314.1| ribonuclease P protein component [Burkholderia phymatum STM815]
gi|184194303|gb|ACC72268.1| ribonuclease P protein component [Burkholderia phymatum STM815]
Length = 169
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 16/127 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ P F + + R+G + KK AV RN
Sbjct: 31 PKAARLLKTDEFSSVFRLRPWRRTPHFVVYARPTGSE---ARLGLVIGKKYAPRAVTRNL 87
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIA-----KRDALFIPFKELCN----HFVERVRRNK 110
++R +EA RL G D +L ++ L + +
Sbjct: 88 VKRLAREAFRLRRAEFG--GWDVLLRLHTKFDRKAMPSGSSPPLKAMCRGEIDTLLDKAA 145
Query: 111 RSYYSGK 117
R +
Sbjct: 146 REIARRE 152
>gi|157803528|ref|YP_001492077.1| ribonuclease P [Rickettsia canadensis str. McKiel]
gi|229470484|sp|A8EY59|RNPA_RICCK RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157784791|gb|ABV73292.1| ribonuclease P [Rickettsia canadensis str. McKiel]
Length = 118
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + N + +G V+KK AV
Sbjct: 3 ITSLKNQKEFELINKLGKKFHERYFILVIAKNLPKIFLETKYNIFLGIKVSKKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ + ++I ++ I F L + + +
Sbjct: 63 RNKIKRRIRHLIRMNVSDSKLKAIKLAMIIIPRKGFEEINFSHLNDELSNIILK 116
>gi|329118141|ref|ZP_08246853.1| ribonuclease P protein component [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465801|gb|EGF12074.1| ribonuclease P protein component [Neisseria bacilliformis ATCC
BAA-1200]
Length = 117
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 3/106 (2%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMR 61
L K +F+ V ++ + N R+G V KK A ERN M+
Sbjct: 6 RQYRLLKTEEFSSVFALRKQRRGELLQISYSAANPCGHARLGLVVAKKTARRAHERNYMK 65
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
R +++ R + D+V+ + +
Sbjct: 66 RVIRDWFRRHKNTL--PPFDFVVRVRCAFECADAPAARAELSRLLA 109
>gi|269140893|ref|YP_003297594.1| RNase P protein component [Edwardsiella tarda EIB202]
gi|267986554|gb|ACY86383.1| RNase P protein component [Edwardsiella tarda EIB202]
gi|304560652|gb|ADM43316.1| Ribonuclease P protein component [Edwardsiella tarda FL6-60]
Length = 81
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 36 NSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
NS PR+G TV K A ERNR++R +E+ RL + D+V+I K+ +
Sbjct: 2 NSLGYPRIGLTVAKKHVKRAHERNRIKRLTRESFRLRQHSL--PAMDFVVIVKKGVQELD 59
Query: 95 FKELCNHFVERVRRNKRSYY 114
+ L + RR+ R
Sbjct: 60 NRALTEMLEKLWRRHCRQAR 79
>gi|316985522|gb|EFV64469.1| ribonuclease P protein component [Neisseria meningitidis H44/76]
Length = 111
Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLGHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVHRKFDRATAKQARAELAQLM 99
>gi|255076667|ref|XP_002502007.1| predicted protein [Micromonas sp. RCC299]
gi|226517272|gb|ACO63265.1| predicted protein [Micromonas sp. RCC299]
Length = 393
Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 5 CILKKRRQFALV--KKGELRKGPFFSLEVLNNN--NSNLLPRVGFTVTKKQ-GCAVERNR 59
+K +R F V ++G G ++ +N R+G V KK AV+RN
Sbjct: 308 ERIKSQRDFQRVMNQQGNNFNGKLMRIKYCSNEGLKDVDCTRIGIKVPKKFVKRAVDRNL 367
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++RR++E R + D +++
Sbjct: 368 VKRRIREIFRRNKDAW-PARTDLIVM 392
>gi|226942150|ref|YP_002797224.1| ribonuclease P [Laribacter hongkongensis HLHK9]
gi|226717077|gb|ACO76215.1| RnpA [Laribacter hongkongensis HLHK9]
Length = 120
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
+ K +F+ V + + +V N R+G V+KK A RN M
Sbjct: 6 RRAQRILKTDEFSSVFRLRRVRSNA-WFQVYVAPNQLGHARLGLVVSKKTAKRANRRNYM 64
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +++ R + V G D+V+ + E R
Sbjct: 65 KRVIRDTFRQHPDRVA--GVDFVVRVRAPFDRAGRPEAVEALRALFARL 111
>gi|319949433|ref|ZP_08023494.1| ribonuclease P [Dietzia cinnamea P4]
gi|319436895|gb|EFV91954.1| ribonuclease P [Dietzia cinnamea P4]
Length = 92
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
PR G V+K G +V R+R+ RRL+ V V+ A + P +L
Sbjct: 15 GGPRFGLVVSKAVGDSVTRHRVSRRLRHIAAEVLADVD-PDLMVVVRANPASATAPHADL 73
Query: 99 CNHFVERV 106
+
Sbjct: 74 VRDMRTGL 81
>gi|303233457|ref|ZP_07320125.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
gi|302480465|gb|EFL43557.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
Length = 98
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G +G + + N + RV F K+ G A RNR +R L+ AVR
Sbjct: 3 GRQLRGKYVRVVY--TNGTLPYARVAFAAGKRIGTAPLRNRCKRLLRAAVRNMVPTTFSA 60
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G++++ A + + + +
Sbjct: 61 GYNFLFFATSATQYAHPASIAKELTRLIGTIR 92
>gi|194291289|ref|YP_002007196.1| ribonuclease p protein component (rnasep protein) (rnase p protein)
(protein c5) [Cupriavidus taiwanensis LMG 19424]
gi|193225124|emb|CAQ71135.1| Ribonuclease P protein component (RNaseP protein) (RNase P protein)
(Protein C5) [Cupriavidus taiwanensis LMG 19424]
Length = 157
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N R+G V KK A ERN
Sbjct: 10 PKAARLTKTDEFSSVFALRPRRRSTHFVLYV--RPNDRPEGRLGVVVGKKFAPRAAERNL 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
++R +E R + + G D +L + F
Sbjct: 68 VKRMARELFRQRRDQLG--GRDVLLRLQAKFPRAEF 101
>gi|148245068|ref|YP_001219762.1| ribonuclease P protein component [Candidatus Vesicomyosocius
okutanii HA]
gi|229470488|sp|A5CVI0|RNPA_VESOH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|146326895|dbj|BAF62038.1| ribonuclease P protein component [Candidatus Vesicomyosocius
okutanii HA]
Length = 113
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ + K + + K + +VL PR+G ++KK A++RN+
Sbjct: 5 LTRNLRVLKPFDYKTIFKHGKIIKGQYW-QVLARKIDTPEPRLGLAISKKVHRLAIDRNK 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+R +E R + + +++++A + + N + ++
Sbjct: 64 TKRIARETFRTHQNDL--NHWEFIVMA-EHSKPAKNSIMTNDLLHLFKKI 110
>gi|83591339|ref|YP_431348.1| ribonuclease P protein component [Moorella thermoacetica ATCC
39073]
gi|83574253|gb|ABC20805.1| ribonuclease P protein component [Moorella thermoacetica ATCC
39073]
Length = 93
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
L L N R G++++KK G AV+RNR++RRL+E R G D V++A+
Sbjct: 4 LYHLVN--QQPYTRFGYSISKKVGKAVKRNRLKRRLREICRQHLASFH-PGLDVVIVARE 60
Query: 89 DALFIPFKELCNHFVER--VRRNKRSYYS 115
A+ P++EL + + + S
Sbjct: 61 QAVEAPYEELEKEVLNLGRWGKILVNRES 89
>gi|222475343|ref|YP_002563760.1| hypothetical protein AMF_665 [Anaplasma marginale str. Florida]
gi|254995152|ref|ZP_05277342.1| hypothetical protein AmarM_04121 [Anaplasma marginale str.
Mississippi]
gi|255003325|ref|ZP_05278289.1| hypothetical protein AmarPR_03651 [Anaplasma marginale str. Puerto
Rico]
gi|255004450|ref|ZP_05279251.1| hypothetical protein AmarV_03921 [Anaplasma marginale str.
Virginia]
gi|222419481|gb|ACM49504.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 141
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLN----NNNSNLLPRVGFTVTKKQGCAV 55
+ + LKKR++FA G L+ + S+ L RVGFTV+KK G +V
Sbjct: 20 LKGVVTLKKRKEFARARFSGRSASSKGLLLQAVEDSAHPPGSDGLVRVGFTVSKKSGNSV 79
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR+RRRL+ + G YV ++ L + V ++R +
Sbjct: 80 VRNRIRRRLRVIAQDVISTSAARGFCYVFVSSSRLSETKLPVLRSSLVSCLKRLR 134
>gi|167969461|ref|ZP_02551738.1| ribonuclease P [Mycobacterium tuberculosis H37Ra]
gi|215413851|ref|ZP_03422516.1| ribonuclease P [Mycobacterium tuberculosis 94_M4241A]
gi|215432904|ref|ZP_03430823.1| ribonuclease P [Mycobacterium tuberculosis EAS054]
gi|215448270|ref|ZP_03435022.1| ribonuclease P [Mycobacterium tuberculosis T85]
gi|219555770|ref|ZP_03534846.1| ribonuclease P [Mycobacterium tuberculosis T17]
Length = 95
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGH 80
+ S PRVG + K G AVER+R+ RRL+ + + H
Sbjct: 2 RTVRSDMVVYWWR--GSGGGPRVGLIIAKSVGSAVERHRVARRLRHVAGSIVKELHPSDH 59
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRN 109
V+ A + + L +RR
Sbjct: 60 -VVIRALPSSRHVSSARLEQQLRCGLRRA 87
>gi|73543144|ref|YP_297664.1| ribonuclease P protein component [Ralstonia eutropha JMP134]
gi|72120557|gb|AAZ62820.1| ribonuclease P protein component [Ralstonia eutropha JMP134]
Length = 166
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V R+ F L V N R+G V KK A ERN
Sbjct: 24 PKAARLTKTDEFSSVFALRPRRRSTHFVLYV--RANGRAEARLGVVVGKKFAPRAAERNL 81
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
++R +E R + + G D +L + F
Sbjct: 82 VKRMARELFRQRQDQLG--GRDVLLRLQTKFPRAEF 115
>gi|284928890|ref|YP_003421412.1| ribonuclease P protein component [cyanobacterium UCYN-A]
gi|284809349|gb|ADB95054.1| ribonuclease P protein component [cyanobacterium UCYN-A]
Length = 121
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL---LPRVGFTVT-KKQGCAV 55
+ L+ + F V K GE + F + L + N N + G +++ K A+
Sbjct: 3 LPKNNRLRHYKAFKSVYKRGECYQSSQFIMHSLFDTNKNHQILPTQFGISISQKVSKKAI 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN ++R++K +R ++ G+ V++ K+ + E + K
Sbjct: 63 VRNYLKRQVKSVIRTFLPKIV-SGYQVVIVVKKQPQVCQYNIFLREIKELLINAK 116
>gi|30248406|ref|NP_840476.1| ribonuclease P protein [Nitrosomonas europaea ATCC 19718]
gi|48474384|sp|Q82X99|RNPA_NITEU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|30138292|emb|CAD84300.1| Bacterial ribonuclease P protein [Nitrosomonas europaea ATCC 19718]
Length = 119
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
+ C L+K +F V + SL + R+G V K+ + AV RNR
Sbjct: 9 LPRQCKLRKADEFRAVLRN-RIVFESLSLRLYVKPIDVDYARIGLIVAKRVERKAVRRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R ++EA R + ++ G D V+ + + + V + R
Sbjct: 68 IKRLIREAFRRHRQMLM--GLDCVMQLRHPVELLDSTRIYQEAVMLFNKAARQL 119
>gi|170694071|ref|ZP_02885227.1| ribonuclease P protein component [Burkholderia graminis C4D1M]
gi|170141143|gb|EDT09315.1| ribonuclease P protein component [Burkholderia graminis C4D1M]
Length = 165
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 34 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 90
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P K L + + +
Sbjct: 91 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSAASPPLKALCRSEIEALLDKAA 148
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 149 REITRRQAPPAEA 161
>gi|119718916|ref|YP_925881.1| ribonuclease P protein component [Nocardioides sp. JS614]
gi|166226730|sp|A1SQV9|RNPA_NOCSJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119539577|gb|ABL84194.1| ribonuclease P protein component [Nocardioides sp. JS614]
Length = 117
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 3/111 (2%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQGCAVERN 58
+S L+ F + R G + L ++ RVGF V++ G AV RN
Sbjct: 2 LSAAHRLRDGATFREAIRRGRRAGRQTLVVHLLVGEPVASQPARVGFVVSRAVGNAVIRN 61
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+++RRL+ R + V+ A A EL + R
Sbjct: 62 QVKRRLRHLAREHVSSLPGSAV-LVVRALPPAANASAAELARDLERCLLRV 111
>gi|311112574|ref|YP_003983796.1| ribonuclease P protein component [Rothia dentocariosa ATCC 17931]
gi|310944068|gb|ADP40362.1| ribonuclease P protein component [Rothia dentocariosa ATCC 17931]
Length = 88
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++K G AV RNR++RRL+E G + A + ++EL + +
Sbjct: 1 MSKAVGNAVTRNRVKRRLRELAAATVSAY-PQGLYIAVRALPASAGANWEELRADYRGAL 59
Query: 107 RRNKRSYYSGKNF 119
+ +
Sbjct: 60 ESSLKKLDRQDQR 72
>gi|326329127|ref|ZP_08195455.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
gi|325953014|gb|EGD45026.1| ribonuclease P protein component [Nocardioidaceae bacterium
Broad-1]
Length = 117
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPR-----VGFTVTKKQGCA 54
+ L F V++G+ + +L + + R VGF V+K G A
Sbjct: 2 LPRRHRLIDSSGFKEAVRRGKRAGSKSLVVHLLVPDTGSDATRESDPQVGFVVSKAVGPA 61
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
V RNR++RRL+ R G+ V
Sbjct: 62 VVRNRVKRRLRHQARESLSGLPGSAVLVV 90
>gi|325983267|ref|YP_004295669.1| ribonuclease P protein component [Nitrosomonas sp. AL212]
gi|325532786|gb|ADZ27507.1| Ribonuclease P protein component [Nitrosomonas sp. AL212]
Length = 128
Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ C L K +F+ + + + L++ N R+G V+KK A RNR
Sbjct: 13 LPKNCRLHKASEFSAIINSKCQISGDL-LQIYTKPNGLGYARLGLIVSKKFERHATRRNR 71
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
++R L+E R D+++ +R + K L
Sbjct: 72 IKRILRETFRRKRGRDKIKEMDWLIRLRRPMIKSESKGLVTEMQ 115
>gi|311109682|ref|YP_003982535.1| ribonuclease P protein component [Achromobacter xylosoxidans A8]
gi|310764371|gb|ADP19820.1| ribonuclease P protein component [Achromobacter xylosoxidans A8]
Length = 123
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 11/116 (9%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQG-CAVERNR 59
L + +FA KG F + N+ + R+G + K+ A RN
Sbjct: 10 ARLHRPSEFAAALKGRRLARGAFFIVSAAPNDLPPGQDACARLGLVIAKRFAAHASTRNA 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN----HFVERVRRNKR 111
++R ++EA R + DYV+ L R R
Sbjct: 70 IKRVIREAFRH--RRLGLPAKDYVVRLHSKVAPATLTALKRAARAEVDAHFERIAR 123
>gi|163845719|ref|YP_001633763.1| ribonuclease P protein component [Chloroflexus aurantiacus J-10-fl]
gi|222523424|ref|YP_002567894.1| ribonuclease P protein component [Chloroflexus sp. Y-400-fl]
gi|189043730|sp|A9WBG7|RNPA_CHLAA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808059|sp|B9LGI0|RNPA_CHLSY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163667008|gb|ABY33374.1| ribonuclease P protein component [Chloroflexus aurantiacus J-10-fl]
gi|222447303|gb|ACM51569.1| ribonuclease P protein component [Chloroflexus sp. Y-400-fl]
Length = 135
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF V++ G P+ L V R GF V+++ G AV+RNR
Sbjct: 1 MRRAYRLRRPEQFRRVRQEGRTFTSPWLILTVAPAR--RRTLRCGFVVSRRVGGAVQRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVR 107
RRR++EAVRL + G+D V + + + PF +L + +R
Sbjct: 59 ARRRVREAVRLLLPRL-TAGYDMVFTIRTPEVIDAPFTQLQDDITALLR 106
>gi|313902788|ref|ZP_07836185.1| ribonuclease P protein component [Thermaerobacter subterraneus DSM
13965]
gi|313466908|gb|EFR62425.1| ribonuclease P protein component [Thermaerobacter subterraneus DSM
13965]
Length = 140
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNS--NLLPRVGFTVTKKQGCAVER 57
+ L++ F V++ G + L + + R GFTV ++ G AV R
Sbjct: 3 LPRPWRLQRGDAFRQVRRQGRSWSNRWVVLFAWRPGGAGGDDPSRAGFTVGRRLGKAVRR 62
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
NR+RR L EA R A V + G V +A+ A + F + +R+ +
Sbjct: 63 NRVRRLLAEAYRQLAPRV-EGGWWLVFVARDAAAGMDFGTARRAVEDVLRKAR 114
>gi|161869310|ref|YP_001598477.1| ribonuclease P [Neisseria meningitidis 053442]
gi|161594863|gb|ABX72523.1| ribonuclease P protein component [Neisseria meningitidis 053442]
gi|325197599|gb|ADY93055.1| ribonuclease P protein component [Neisseria meningitidis G2136]
Length = 111
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLK 65
+ K F+ V R+ +N N PR+G V KK A ERN M+R ++
Sbjct: 1 MLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDHPRIGLVVGKKTAKRANERNYMKRVIR 60
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+ RL + D+V+ R K+ + +
Sbjct: 61 DWFRLNKNRLPPQ--DFVVRVHRKFDRSTAKQARAELAQLM 99
>gi|260579559|ref|ZP_05847430.1| ribonuclease P protein component [Corynebacterium jeikeium ATCC
43734]
gi|258602330|gb|EEW15636.1| ribonuclease P protein component [Corynebacterium jeikeium ATCC
43734]
Length = 73
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG---VLKHGHDYVLIAKRDALFIPFKELC 99
+G V+K G AV R+ R+L+ A R E G V+ A + F+EL
Sbjct: 1 MGLVVSKAVGNAVTRHNTSRKLRHAFRAVMEEDSLDFPVGTTVVIRALPKSATASFEELV 60
Query: 100 NHFVERVRRN 109
+RR
Sbjct: 61 GDVRSCIRRA 70
>gi|67921806|ref|ZP_00515323.1| ribonuclease P protein [Crocosphaera watsonii WH 8501]
gi|67856398|gb|EAM51640.1| ribonuclease P protein [Crocosphaera watsonii WH 8501]
Length = 96
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L + + + G +V++K AV RNR++R++K +R+ ++K G+ V++
Sbjct: 3 VLSKADQQPTTPPTQFGISVSRKVSKKAVTRNRLKRQIKGVIRVFLP-MIKPGYQVVIVV 61
Query: 87 KRDALFIPFKELCNHFVERVRRNK 110
KR+A ++ E + + +
Sbjct: 62 KRNATECKYEHFLRELEELLIKAE 85
>gi|293602693|ref|ZP_06685134.1| ribonuclease P protein component [Achromobacter piechaudii ATCC
43553]
gi|292818884|gb|EFF77924.1| ribonuclease P protein component [Achromobacter piechaudii ATCC
43553]
Length = 123
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 11/116 (9%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNN----SNLLPRVGFTVTKKQG-CAVERNR 59
L + +FA KG + N+ + R+G + K+ A RN
Sbjct: 10 ARLHRPSEFAAALKGRRLARGALFIVTSAPNDLPPGQDPCARLGLIIAKRFAAHASTRNA 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN----HFVERVRRNKR 111
++R ++EA R + DYV+ L R R
Sbjct: 70 IKRVIREAFRH--RRLALPAKDYVVRLHSKVAPASLTSLKRLVRTEVDAHFERIAR 123
>gi|295698379|ref|YP_003603034.1| ribonuclease P protein component [Candidatus Riesia pediculicola
USDA]
gi|291157408|gb|ADD79853.1| ribonuclease P protein component [Candidatus Riesia pediculicola
USDA]
Length = 116
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 2/105 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMR 61
S L K++ F K + + N K + ERNR++
Sbjct: 4 SKKFRLSKKKFFDRAFKNPKKVSYNGIVIFAKENFLQYPRIGLIISKKNIKHSSERNRIK 63
Query: 62 RRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R ++E RL D++++ KR+ + + + +
Sbjct: 64 RLIRECFRLNL--FFLKKMDFIVLVKRNLKNLENRRINKTLNKLW 106
>gi|78776722|ref|YP_393037.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
gi|78497262|gb|ABB43802.1| ribonuclease P protein [Sulfurimonas denitrificans DSM 1251]
Length = 79
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+GFT TKK G AV+RNR +RRL+ +L+ G Y+ +AK+ ++L N F
Sbjct: 1 MGFTATKKIGNAVKRNRAKRRLRALF-FTYSSLLQDGT-YIFVAKQTISETSHQKLQNDF 58
Query: 103 VERVRRNKRSYYSGKNFS 120
+ + R + S
Sbjct: 59 EKVLSRLDTLKKKTDDQS 76
>gi|83747142|ref|ZP_00944185.1| Ribonuclease P protein component [Ralstonia solanacearum UW551]
gi|207741914|ref|YP_002258306.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609]
gi|83726117|gb|EAP73252.1| Ribonuclease P protein component [Ralstonia solanacearum UW551]
gi|206593300|emb|CAQ60227.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609]
Length = 155
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++R+ +E RL + G D ++
Sbjct: 77 IKRQCRELFRLRQATLG--GRDVLVRLHAKFPRED 109
>gi|262273128|ref|ZP_06050945.1| ribonuclease P protein component [Grimontia hollisae CIP 101886]
gi|262222884|gb|EEY74192.1| ribonuclease P protein component [Grimontia hollisae CIP 101886]
Length = 69
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
K+ AV+RNR +R ++E+ RL + DYV+IAK+ A + +EL + +
Sbjct: 3 KKQIKLAVDRNRFKRLVRESFRLHQHDL--PAKDYVVIAKKSANELSNEELSKLLDKLWQ 60
Query: 108 RNKRSYYS 115
R R
Sbjct: 61 RLSRPPRK 68
>gi|313679790|ref|YP_004057529.1| ribonuclease p protein component [Oceanithermus profundus DSM
14977]
gi|313152505|gb|ADR36356.1| ribonuclease P protein component [Oceanithermus profundus DSM
14977]
Length = 117
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+ LK F ++KG + S+ L RVG V+KK G AV R R
Sbjct: 1 MTSLKTDAAFRRLRKGRTGRARTLSVRWL--PTRRGEVRVGIVVSKKVGNAVV----RNR 54
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
++ +R + D +++A+ +A F EL + + ++ +
Sbjct: 55 VRRRLREILRRMHLPSADLMVVARPEAAEADFHELARDLMRALDKSGLLRHRP 107
>gi|313887223|ref|ZP_07820918.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923314|gb|EFR34128.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 252
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 13/133 (9%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
++ L R + + +G + L + P + ++
Sbjct: 16 LTKGERLYLREEIERLHSRGRSFVSYPIRIVWLAEPIATQSPGDQAQVAVMTSVAKRRFK 75
Query: 53 CAVERNRMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFI--PFKELCNHFVERVR 107
AV+RNR++R + A RL + H V IA + + EL +
Sbjct: 76 HAVDRNRIKRMTRSAYRLHKAPLWQVATQHHCTVRIALQSVAKTMPSYPELEQAVERAIA 135
Query: 108 RNKRSYYSGKNFS 120
R + S
Sbjct: 136 RIVKEIEKANPTS 148
>gi|207727480|ref|YP_002255874.1| ribonuclease p protein component [Ralstonia solanacearum MolK2]
gi|206590717|emb|CAQ56329.1| ribonuclease p protein component [Ralstonia solanacearum MolK2]
Length = 155
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++R+ +E RL + G D ++
Sbjct: 77 IKRQCRELFRLRQATLG--GRDVLIRLHAKFPRED 109
>gi|71891806|ref|YP_277535.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123641224|sp|Q494B8|RNPA_BLOPB RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|71795912|gb|AAZ40663.1| RNase P, protein component [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 115
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ L +F V + K +L + +N PR+G ++KK A ERN
Sbjct: 6 LPKRARLLNLNEFIFVFQKPERVKTTGITLF--SRSNRLGYPRIGLAISKKYVKYAHERN 63
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERV 106
R++R ++E R C +L D+VL + ++ ++ K L +
Sbjct: 64 RIKRHIRETFRTCQHNLLAK--DFVLTIRSKEIIYYKNKTLIQELEKLW 110
>gi|296157623|ref|ZP_06840458.1| ribonuclease P protein component [Burkholderia sp. Ch1-1]
gi|295892395|gb|EFG72178.1| ribonuclease P protein component [Burkholderia sp. Ch1-1]
Length = 161
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 30 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 86
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P + L + + +
Sbjct: 87 VRRIAREAFRLRRADFG--GWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAA 144
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 145 REVTRREAPPAEA 157
>gi|300705599|ref|YP_003747202.1| ribonuclease p protein component [Ralstonia solanacearum CFBP2957]
gi|299073263|emb|CBJ44622.1| Ribonuclease P protein component [Ralstonia solanacearum CFBP2957]
Length = 155
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N R+G + KK AVERN
Sbjct: 19 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGYPQARLGIVIGKKFARRAVERNL 76
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++R+ +E RL + G D ++
Sbjct: 77 IKRQCRELFRLRQATLG--GRDVLIRLHAKFPRED 109
>gi|187925956|ref|YP_001897598.1| ribonuclease P [Burkholderia phytofirmans PsJN]
gi|187717150|gb|ACD18374.1| ribonuclease P protein component [Burkholderia phytofirmans PsJN]
Length = 161
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 30 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 86
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P + L + + +
Sbjct: 87 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAA 144
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 145 REVTRRQAPPAEA 157
>gi|209519688|ref|ZP_03268477.1| ribonuclease P protein component [Burkholderia sp. H160]
gi|209499905|gb|EDZ99971.1| ribonuclease P protein component [Burkholderia sp. H160]
Length = 159
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 28 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGND---ARLGLVIGKKYAPRAATRNL 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P K L + + +
Sbjct: 85 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSASSPPLKTLCRSEIEALLDKAA 142
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 143 REITRRQAPPAEA 155
>gi|330831725|ref|YP_004394677.1| ribonuclease P protein component [Aeromonas veronii B565]
gi|328806861|gb|AEB52060.1| Ribonuclease P protein component [Aeromonas veronii B565]
Length = 68
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
K AV RNR++R ++E+ RL + D V+IAK + +EL + R
Sbjct: 3 KKALKRAVWRNRVKRVVRESFRLKQHQL--PAIDIVVIAKAGVKEMDNEELFKLLEKLWR 60
Query: 108 RNKRS 112
R
Sbjct: 61 TLSRR 65
>gi|317401602|gb|EFV82228.1| ribonuclease P protein component [Achromobacter xylosoxidans C54]
Length = 123
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQG-CAVERNR 59
L + +FA KG F + + + R+G + K+ A RN
Sbjct: 10 ARLHRPSEFAAALKGRRLARGAFFVVSAASNDLPPDQAPCARLGLVIAKRFAAHATTRNA 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
++R ++EA R + DYV+ L
Sbjct: 70 LKRVIREAFRH--RRLGLPAKDYVVRLHSKVTPATLTALKQA 109
>gi|86743222|ref|YP_483622.1| ribonuclease P protein component [Frankia sp. CcI3]
gi|86570084|gb|ABD13893.1| ribonuclease P protein component [Frankia sp. CcI3]
Length = 104
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 19 GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKH 78
G + + L S+ R GF V ++ G AV RNR+RRRL+E VR+ + +
Sbjct: 2 GRRTRSGPLVVHSLW-TTSDDPARAGFVVGRRVGKAVVRNRVRRRLREQVRVRLDTLA-P 59
Query: 79 GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS--YYSGKNFSR 121
G V+ A DA EL + R R R
Sbjct: 60 GTMLVVRALPDAATASSAELGRALDTALTRVARPAGARRPDGRGR 104
>gi|158319057|ref|YP_001511565.1| ribonuclease P protein component [Frankia sp. EAN1pec]
gi|238686849|sp|A8L8W2|RNPA_FRASN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|158114462|gb|ABW16659.1| ribonuclease P protein component [Frankia sp. EAN1pec]
Length = 121
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
++ R++ ALV + R + + + PR GF V ++ G AV RNR+RRRL+
Sbjct: 7 RVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNRVRRRLR 66
Query: 66 EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
E R + G ++ A DA +L R + S
Sbjct: 67 EQTRSRLSSL-PPGTAVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARS 120
>gi|160871891|ref|ZP_02062023.1| ribonuclease P protein component [Rickettsiella grylli]
gi|159120690|gb|EDP46028.1| ribonuclease P protein component [Rickettsiella grylli]
Length = 120
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
+++ F + GE +K + V N RVG ++KK A+ RNR+
Sbjct: 10 KSSRIQRAEDFRKTFQQGEKQKRGGLVVYV--KPNDLGFARVGLVISKKIVPNAINRNRL 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIA 86
+R ++E+ RL + + D +++
Sbjct: 68 KRLIRESFRLNQQRL--PDVDIIVVV 91
>gi|157826004|ref|YP_001493724.1| ribonuclease P [Rickettsia akari str. Hartford]
gi|229470483|sp|A8GP91|RNPA_RICAH RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157799962|gb|ABV75216.1| ribonuclease P [Rickettsia akari str. Hartford]
Length = 118
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + N S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGKKFHERYFILVIARNLPTIFLKSQYNTFLGIKVSRKLNKKAVI 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ VR+ + ++I ++ I F L + V R
Sbjct: 63 RNKIKRRIRHLVRIIVSDAKLSAVKFAMIIIPRKGFEEINFSHLNYELSKIVLR 116
>gi|332299745|ref|YP_004441666.1| Ribonuclease P protein component [Porphyromonas asaccharolytica DSM
20707]
gi|332176808|gb|AEE12498.1| Ribonuclease P protein component [Porphyromonas asaccharolytica DSM
20707]
Length = 252
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 13/133 (9%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
++ L R + + +G + L + P + ++
Sbjct: 16 LTKGERLYLREEIERLHSRGRSFVSYPIRIVWLAEPIATQSPGDQTQVAVMTSVAKRRFK 75
Query: 53 CAVERNRMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFI--PFKELCNHFVERVR 107
AV+RNR++R + A RL + H V IA + + EL +
Sbjct: 76 HAVDRNRIKRMTRSAYRLHKAPLWQVATQHHCTVRIALQSVAKTMPTYPELEQAVERAIA 135
Query: 108 RNKRSYYSGKNFS 120
R + S
Sbjct: 136 RIVKEIEKANPTS 148
>gi|257057915|ref|YP_003135747.1| ribonuclease P protein component [Saccharomonospora viridis DSM
43017]
gi|256587787|gb|ACU98920.1| ribonuclease P protein component [Saccharomonospora viridis DSM
43017]
Length = 122
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 5 CILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L++ +F V + G L VL + GF V+K G +V R+R+ RR
Sbjct: 6 ARLRRSEEFRAVIRGGVRAGRRRLVLHVL--PGYAQRTKAGFVVSKAVGNSVVRHRVLRR 63
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L+ V + G V+ A A +EL +RR + S S N
Sbjct: 64 LRHLVAERLGTL-PEGSALVVRALPAAATASSEELGADLDAALRRLRLSPSSRDN 117
>gi|329121493|ref|ZP_08250117.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
gi|327469408|gb|EGF14878.1| ribonuclease P protein component [Dialister micraerophilus DSM
19965]
Length = 84
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKE 97
R+GF TKK G AV RNR +R +KE RL + K GHD +++A ++E
Sbjct: 8 RSGVRIGFVATKKIGTAVMRNRAKRLMKEVYRLHRHEL-KSGHDAIMLANAFLTRATYEE 66
Query: 98 LCNHFVERVRRN 109
+ +
Sbjct: 67 AEEAILSLWHKA 78
>gi|187930820|ref|YP_001901307.1| ribonuclease P protein component [Ralstonia pickettii 12J]
gi|309780184|ref|ZP_07674935.1| ribonuclease P [Ralstonia sp. 5_7_47FAA]
gi|238691783|sp|B2U822|RNPA_RALPJ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|187727710|gb|ACD28875.1| ribonuclease P protein component [Ralstonia pickettii 12J]
gi|308920887|gb|EFP66533.1| ribonuclease P [Ralstonia sp. 5_7_47FAA]
Length = 140
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 13/122 (10%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 7 PKAARLTKTDEFSSVFALRPVRRSRHFVLYVRANGD--RPARLGVVIGKKFAKRAVERNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP------FKEL-CNHFVERVRRNKRS 112
++R+ +E RL + G D ++ + FK + + R
Sbjct: 65 IKRQCRELFRLRQPLLG--GRDVLIRLQAKFPRQDVPTVAAFKRICREELAQLFEVATRP 122
Query: 113 YY 114
Sbjct: 123 LS 124
>gi|241665035|ref|YP_002983395.1| ribonuclease P [Ralstonia pickettii 12D]
gi|240867062|gb|ACS64723.1| ribonuclease P protein component [Ralstonia pickettii 12D]
Length = 140
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 7 PKAARLTKTDEFSSVFALRPVRRSRHFVLYVRANGAAQA--RLGVVIGKKFAKRAVERNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP------FKEL-CNHFVERVR 107
++R+ +E RL + G D ++ + FK + V
Sbjct: 65 IKRQCRELFRLRQPLLG--GRDVLIRLQAKFPRQDVPTVAAFKRICREELVHLFE 117
>gi|56416975|ref|YP_154049.1| hypothetical protein AM881 [Anaplasma marginale str. St. Maries]
gi|56388207|gb|AAV86794.1| hypothetical protein AM881 [Anaplasma marginale str. St. Maries]
Length = 119
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLN----NNNSNLLPRVGFTVTKKQGCAVERN 58
+ LKKR +FA G L+ + S+ L RVGFTV+KK G +V RN
Sbjct: 1 MVTLKKREEFARARFSGRSASSKGLLLQAVEDSAHPPGSDGLVRVGFTVSKKSGNSVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
R+RRRL+ + G YV ++ L + V ++R +
Sbjct: 61 RIRRRLRVIAQDVISTSAARGFCYVFVSSSRLSETKLPVLRSSLVSCLKRLR 112
>gi|154174307|ref|YP_001408437.1| ribonuclease P protein component [Campylobacter curvus 525.92]
gi|112802936|gb|EAU00280.1| ribonuclease P protein component [Campylobacter curvus 525.92]
Length = 80
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L ++ + ++ +KK G AV RNR +R L+ A + + Y+++AK
Sbjct: 1 MLFYKPSSEN----KLAVVASKKVGKAVVRNRAKRLLRAAFLEVCDEL--EDGIYIMVAK 54
Query: 88 RDALFIPFKELCNHFVERVRRN 109
+ I F ++ + +++
Sbjct: 55 CGLIEISFDKIHKNLRWSLKKL 76
>gi|295678216|ref|YP_003606740.1| ribonuclease P protein component [Burkholderia sp. CCGE1002]
gi|295438059|gb|ADG17229.1| ribonuclease P protein component [Burkholderia sp. CCGE1002]
Length = 159
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 28 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 84
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P K L + + +
Sbjct: 85 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSASSSPLKALCRSEIEALLDKAA 142
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 143 REITRRQAPPAEA 155
>gi|46579488|ref|YP_010296.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448902|gb|AAS95555.1| ribonuclease P protein component [Desulfovibrio vulgaris str.
Hildenborough]
Length = 96
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
L V+ + R+G VT+K G AV+RNR++R L+E RL VL D + + K
Sbjct: 1 MLFVMERSADPEGWRLGLAVTRKTGTAVQRNRVKRVLREFFRLHQH-VLPDDADIIAVPK 59
Query: 88 R 88
R
Sbjct: 60 R 60
>gi|302024560|ref|ZP_07249771.1| ribonuclease P [Streptococcus suis 05HAS68]
Length = 65
Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RN+++RR++ + C ++ D+V+IA++ + ++E+ + + ++ K
Sbjct: 2 RNKIKRRIRHILIECQHQLVAD--DFVIIARKGVEELSYQEMKQNLIHVLKLAK 53
>gi|319778794|ref|YP_004129707.1| Ribonuclease P protein component [Taylorella equigenitalis MCE9]
gi|317108818|gb|ADU91564.1| Ribonuclease P protein component [Taylorella equigenitalis MCE9]
Length = 123
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
S L +F V K + K F N+ PR+G V KK AV+RN +
Sbjct: 10 SKDVRLLNPSEFDQVFKKRMIKRGVFLTLHYA-QNNLGYPRLGLVVAKKFFKKAVQRNAV 68
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+R ++E RL + D ++ ++L ++
Sbjct: 69 KRVIREEFRLNKSNL--QHLDLIVRVHGVLPPSSLRKLKSNVR 109
>gi|94987511|ref|YP_595444.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
gi|94731760|emb|CAJ55123.1| RNase P protein component [Lawsonia intracellularis PHE/MN1-00]
Length = 79
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+G V+KK G AV RNR++R L+E RL + D V++ K
Sbjct: 1 MGLAVSKKIGNAVVRNRIKRLLRECFRLHQ-EYIPKSVDIVVVPK 44
>gi|33519497|ref|NP_878329.1| ribonuclease P [Candidatus Blochmannia floridanus]
gi|48474806|sp|Q7VQV1|RNPA_BLOFL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33517160|emb|CAD83542.1| RNase P, protein component [Candidatus Blochmannia floridanus]
Length = 120
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+S L K +F V + + K +L + +N PR+G ++KK + ERN
Sbjct: 6 LSKRVRLLKINEFFFVFQKPQRIKVHSMTLF--SRSNKLNFPRIGLAISKKYIKHSHERN 63
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERV 106
R++R ++E R +L D++L + L + L +
Sbjct: 64 RIKRHVRETFRTHKHNLL--SLDFILTVHSKQILSLTNNNLIEELKKLW 110
>gi|269958612|ref|YP_003328399.1| hypothetical protein ACIS_00460 [Anaplasma centrale str. Israel]
gi|269848441|gb|ACZ49085.1| hypothetical protein ACIS_00460 [Anaplasma centrale str. Israel]
Length = 124
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLP----RVGFTVTKKQGCAV 55
+ + LKKRR+F+ G L+ + + RVGFTV+KK G +V
Sbjct: 3 LRGVVTLKKRREFSHARFSGRSASSGGLLLQAVEDPAGPSGSAGLVRVGFTVSKKSGNSV 62
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RNR+RRRL+ + G YV ++ + +L + V ++R K
Sbjct: 63 VRNRIRRRLRVVAQDVISASAARGFCYVFVSSSRLSYAKVSDLRSSLVSCLKRLK 117
>gi|308190320|ref|YP_003923251.1| hypothetical protein MFE_08030 [Mycoplasma fermentans JER]
gi|307625062|gb|ADN69367.1| hypothetical protein MFE_08030 [Mycoplasma fermentans JER]
Length = 83
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
+ + N++ ++G TV KK AV RN +R+LK + + +VLI
Sbjct: 1 MIIYYMPNDD----FKIGITVPKKFCNAVLRNYYKRQLKSIIHSL--NLYGEKMHFVLIP 54
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYYS 115
++D L + +++ + + K
Sbjct: 55 RKDFLNLIYEDKLTITKKLFEKIKNGKQK 83
>gi|221201817|ref|ZP_03574854.1| ribonuclease P protein component [Burkholderia multivorans CGD2M]
gi|221207677|ref|ZP_03580685.1| ribonuclease P protein component [Burkholderia multivorans CGD2]
gi|221172523|gb|EEE04962.1| ribonuclease P protein component [Burkholderia multivorans CGD2]
gi|221178237|gb|EEE10647.1| ribonuclease P protein component [Burkholderia multivorans CGD2M]
Length = 153
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLLR 106
>gi|161526325|ref|YP_001581337.1| ribonuclease P protein component [Burkholderia multivorans ATCC
17616]
gi|160343754|gb|ABX16840.1| ribonuclease P protein component [Burkholderia multivorans ATCC
17616]
Length = 153
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLLR 106
>gi|254447349|ref|ZP_05060815.1| ribonuclease P protein component [gamma proteobacterium HTCC5015]
gi|198262692|gb|EDY86971.1| ribonuclease P protein component [gamma proteobacterium HTCC5015]
Length = 116
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERN 58
++ L F+ V K + GP ++ V N R+G V+K G AV RN
Sbjct: 3 LTRQATLTGPDDFSFVFAKAKKIYGPHLTVLV--RPNGRGAARLGLAVSKKHTGNAVVRN 60
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R+RR +KE+ R E + G D V+++KR + +EL ++ + +
Sbjct: 61 RVRRIVKESFRHHREQLG--GLDIVVLSKRGVAEVERRELRQAIDQQWQSTLKKCRRS 116
>gi|88608075|ref|YP_506724.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
gi|88600244|gb|ABD45712.1| ribonuclease P protein component [Neorickettsia sennetsu str.
Miyayama]
Length = 113
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 20 ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
S+ +L + + + P VGF VTKK G AV+RN++RR+L+ +
Sbjct: 20 NSFGCRSGSILLLISRGTTVEPVVGFIVTKKVGSAVKRNKVRRKLRGLLPFLVSMKKLLN 79
Query: 80 HDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
Y+ I ++F F + + + R RS
Sbjct: 80 RAYIFIPSPASVFSDFSAMREDVLSCLERAGRS 112
>gi|221214577|ref|ZP_03587547.1| ribonuclease P protein component [Burkholderia multivorans CGD1]
gi|221165467|gb|EED97943.1| ribonuclease P protein component [Burkholderia multivorans CGD1]
Length = 153
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGRP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G+D +L
Sbjct: 83 VKRLAREAFRVRRAEFA--GYDLLLR 106
>gi|301169724|emb|CBW29325.1| unnamed protein product [Haemophilus influenzae 10810]
Length = 71
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
K A ERNR++R ++E+ RL + +D+V +AK + +
Sbjct: 3 VAKKHLKRAHERNRIKRLVRESFRLSQHCL--PAYDFVFVAKNGIGKLDNSTFAQILEKL 60
Query: 106 VRRNKRSYYSG 116
+R+ R
Sbjct: 61 WQRHIRLAQKS 71
>gi|260424966|ref|ZP_05779067.1| ribonuclease P protein component [Dialister invisus DSM 15470]
gi|260403761|gb|EEW97308.1| ribonuclease P protein component [Dialister invisus DSM 15470]
Length = 84
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
R+GF TK+ G AV RNR RR +KE RL + ++ +L+A
Sbjct: 5 RTKREPVRIGFVTTKRIGNAVARNRARRLMKEVYRLHRHELS-SHYEAILLAAAFLTTAT 63
Query: 95 FKELCNHFVERVRRN 109
+ E + R+
Sbjct: 64 YSEAEKALLALWRKA 78
>gi|33591702|ref|NP_879346.1| ribonuclease P [Bordetella pertussis Tohama I]
gi|33598886|ref|NP_886529.1| ribonuclease P [Bordetella parapertussis 12822]
gi|33603965|ref|NP_891525.1| ribonuclease P [Bordetella bronchiseptica RB50]
gi|46397709|sp|Q7VSD8|RNPA_BORPE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397710|sp|Q7W2K3|RNPA_BORPA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|46397711|sp|Q7WDJ7|RNPA_BORBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33568941|emb|CAE35355.1| ribonuclease P protein component [Bordetella bronchiseptica RB50]
gi|33571345|emb|CAE44822.1| ribonuclease P protein component [Bordetella pertussis Tohama I]
gi|33575016|emb|CAE39682.1| ribonuclease P protein component [Bordetella parapertussis]
gi|332381121|gb|AEE65968.1| ribonuclease P [Bordetella pertussis CS]
Length = 123
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLE----VLNNNNSNLLPRVGFTVTKKQG-CAV 55
+ L + +FA KG F + ++ R+G + K+ AV
Sbjct: 6 LPAEARLHRPSEFAAALKGRRLARGAFFIVSASPCAPADDQPARARLGLVIAKRFAARAV 65
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RN ++R ++EA R A + DYV+ L
Sbjct: 66 TRNTLKRVIREAFR--ARRLALPAQDYVVRLHSKLTPASLTALKRS 109
>gi|219848107|ref|YP_002462540.1| ribonuclease P protein component [Chloroflexus aggregans DSM 9485]
gi|254808057|sp|B8G7S5|RNPA_CHLAD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|219542366|gb|ACL24104.1| ribonuclease P protein component [Chloroflexus aggregans DSM 9485]
Length = 135
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L++ QF V++ G + +L V R GF ++ G AV+RNR
Sbjct: 1 MRRANRLRRPAQFRRVRQTGRTFSSAWLTLTVA--PGRRDGVRCGFITGRRLGKAVQRNR 58
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAK-RDALFIPFKELCNHFVERVR 107
RRR++EAVRL + G+D + + + + PF +L + +R
Sbjct: 59 ARRRVREAVRLLLPSL-TTGYDLLFAIRSPEVIEAPFSQLQADIIRLLR 106
>gi|148241738|ref|YP_001226895.1| ribonuclease P protein component [Synechococcus sp. RCC307]
gi|166228257|sp|A5GRN3|RNPA_SYNR3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147850048|emb|CAK27542.1| Ribonuclease P protein component [Synechococcus sp. RCC307]
Length = 127
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 11/120 (9%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---------NNNNSNLLPRVGFTVT-K 49
+ L+ R F + +G+ + L V R G ++ K
Sbjct: 3 LPQRHRLRGRGVFDYIYQRGQRFQQGLLQLRVADAATNLLREPPETLEGELRFGVVISSK 62
Query: 50 KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
AV+RNR+RR L EA +L + A+ + L + ++R
Sbjct: 63 VSKRAVKRNRLRRLLHEAFLRQTFRSDLPPTWLLLNLRPGAVELSDDNLLEEWSTLIQRA 122
>gi|325969855|ref|YP_004246046.1| ribonuclease P protein component [Spirochaeta sp. Buddy]
gi|324025093|gb|ADY11852.1| Ribonuclease P protein component [Spirochaeta sp. Buddy]
Length = 116
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+S I+K++ + V K G+ L V + N + R+ + G AV+RNR
Sbjct: 5 LSKKEIVKRKPEIDRVFKTGKTYACLGLKLIV--SQNQLDVDRIVVIPVRHYGSAVQRNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR++KE R ++ G+D+ I + + +
Sbjct: 63 IRRQIKEIWRNEKPRMV-PGYDFAFIVYPGKVN-DHTSQKKQLLALCEKA 110
>gi|74318844|ref|YP_316584.1| ribonuclease P protein component [Thiobacillus denitrificans ATCC
25259]
gi|74058339|gb|AAZ98779.1| ribonuclease P protein component [Thiobacillus denitrificans ATCC
25259]
Length = 99
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVL--IA 86
V+ N+ PR+G V K+ AV+RNR++R ++E+ R + DYV+ IA
Sbjct: 1 MVMARPNAVGYPRLGMVVGKRLLARAVDRNRVKRCVRESFRQVLAEL--PACDYVVRLIA 58
Query: 87 KR 88
K
Sbjct: 59 KP 60
>gi|215919289|ref|NP_820895.2| ribonuclease P protein component [Coxiella burnetii RSA 493]
gi|206584173|gb|AAO91409.2| ribonuclease P protein component [Coxiella burnetii RSA 493]
Length = 122
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KEA R+ + + D V++AK ++ KEL + + ++ +
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLEKQSKRSSS 121
>gi|15594786|ref|NP_212575.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi B31]
gi|224533593|ref|ZP_03674182.1| ribonuclease P protein component [Borrelia burgdorferi CA-11.2a]
gi|3915853|sp|P50069|RNPA_BORBU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|2688354|gb|AAB91511.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi B31]
gi|224513266|gb|EEF83628.1| ribonuclease P protein component [Borrelia burgdorferi CA-11.2a]
Length = 119
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR KEA R E + D + + L + + + + V R +R K
Sbjct: 63 RRLFKEAFRKRLELLEGIALDIIFVVSYGKLTLTYFSIESLMKGLVLRCERGIGESK 119
>gi|212217711|ref|YP_002304498.1| ribonuclease P protein component [Coxiella burnetii CbuK_Q154]
gi|212011973|gb|ACJ19353.1| ribonuclease P protein component [Coxiella burnetii CbuK_Q154]
Length = 122
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KEA R+ + + D V++AK ++ KEL + + +R +
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|90422338|ref|YP_530708.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
gi|90104352|gb|ABD86389.1| ribonuclease P protein component [Rhodopseudomonas palustris
BisB18]
Length = 95
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 23 KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDY 82
P F L+ + ++ + RVGFTVTKK G A ERNR+RRRL+E V+ ++ DY
Sbjct: 2 SRPAFVLQGRDRDD-DGPIRVGFTVTKKIGTATERNRIRRRLREVVKRVDGAAMRPHSDY 60
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
VL+ +R AL F + + + R R S
Sbjct: 61 VLVGRRAALDRGFSVMIDDLHVALDRIGRGRQSR 94
>gi|161831534|ref|YP_001597734.1| ribonuclease P protein component [Coxiella burnetii RSA 331]
gi|1173098|sp|P45648|RNPA_COXBU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|189043735|sp|A9NBA3|RNPA_COXBR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|511457|gb|AAA56917.1| RNase P protein component [Coxiella burnetii]
gi|161763401|gb|ABX79043.1| ribonuclease P protein component [Coxiella burnetii RSA 331]
Length = 121
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KEA R+ + + D V++AK ++ KEL + + ++ +
Sbjct: 68 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLEKQSKRSSS 120
>gi|88854498|ref|ZP_01129165.1| hypothetical protein A20C1_09779 [marine actinobacterium PHSC20C1]
gi|88816306|gb|EAR26161.1| hypothetical protein A20C1_09779 [marine actinobacterium PHSC20C1]
Length = 80
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 34 NNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
NN + R GF V+K G AV RN++RRRL+ A V G D V+ A D+
Sbjct: 2 NNERSTPARFGFIVSKAVGNAVVRNKVRRRLRAAAAQLLPRV-PGGSDIVVRALADSAQA 60
Query: 94 PFKELCNHFVERVRRN 109
+ L E + R
Sbjct: 61 EWTTLQAEIAEGIDRI 76
>gi|88813022|ref|ZP_01128264.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
gi|88789655|gb|EAR20780.1| Ribonuclease P protein component [Nitrococcus mobilis Nb-231]
Length = 81
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L + ++A V G +F++ V+ N++ R+G TV+KK AV RNR
Sbjct: 7 PRSVRLTRPAEYARVFAGARRVADCYFTVLVIRNDHDRA--RLGVTVSKKTAPLAVVRNR 64
Query: 60 MRRRLKEAVRLCA 72
++RR++EA RL
Sbjct: 65 IKRRIREAFRLHQ 77
>gi|153209753|ref|ZP_01947491.1| ribonuclease P protein component [Coxiella burnetii 'MSU Goat
Q177']
gi|165922506|ref|ZP_02219677.1| ribonuclease P protein component [Coxiella burnetii RSA 334]
gi|120575256|gb|EAX31880.1| ribonuclease P protein component [Coxiella burnetii 'MSU Goat
Q177']
gi|165916711|gb|EDR35315.1| ribonuclease P protein component [Coxiella burnetii RSA 334]
Length = 121
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KEA R+ + + D V++AK ++ KEL + + +R +
Sbjct: 68 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 120
>gi|163859334|ref|YP_001633632.1| ribonuclease P [Bordetella petrii DSM 12804]
gi|254808051|sp|A9IJC1|RNPA_BORPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|163263062|emb|CAP45365.1| ribonuclease P protein component [Bordetella petrii]
Length = 123
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 7/101 (6%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVL----NNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L + +FA KG F + R+G + K+ A RN
Sbjct: 10 ARLHRPSEFAAALKGRRLARGAFFILSAAPSSPPPGQAAQARLGMVIAKRYAAHASTRNA 69
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
++R ++EA R C + DYVL L
Sbjct: 70 LKRVIREAFRHCRLELPPQ--DYVLRLHSKPAPATLTSLKR 108
>gi|209363713|ref|YP_001423628.2| ribonuclease P protein component [Coxiella burnetii Dugway
5J108-111]
gi|207081646|gb|ABS77389.2| ribonuclease P protein component [Coxiella burnetii Dugway
5J108-111]
Length = 122
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KE R+ + + D V++AK ++ KEL + + +R +
Sbjct: 69 VKETFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|212211695|ref|YP_002302631.1| ribonuclease P protein component [Coxiella burnetii CbuG_Q212]
gi|212010105|gb|ACJ17486.1| ribonuclease P protein component [Coxiella burnetii CbuG_Q212]
Length = 122
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 11 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 68
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KEA R+ + + D V++AK ++ KEL + + +R +
Sbjct: 69 VKEAFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 121
>gi|195942020|ref|ZP_03087402.1| ribonuclease P protein component (rnpA) [Borrelia burgdorferi 80a]
gi|216264508|ref|ZP_03436500.1| ribonuclease P protein component [Borrelia burgdorferi 156a]
gi|218249336|ref|YP_002374952.1| ribonuclease P protein component [Borrelia burgdorferi ZS7]
gi|221218010|ref|ZP_03589476.1| ribonuclease P protein component [Borrelia burgdorferi 72a]
gi|223888677|ref|ZP_03623268.1| ribonuclease P protein component [Borrelia burgdorferi 64b]
gi|224532524|ref|ZP_03673149.1| ribonuclease P protein component [Borrelia burgdorferi WI91-23]
gi|225549524|ref|ZP_03770490.1| ribonuclease P protein component [Borrelia burgdorferi 118a]
gi|226321072|ref|ZP_03796614.1| ribonuclease P protein component [Borrelia burgdorferi 29805]
gi|226321750|ref|ZP_03797276.1| ribonuclease P protein component [Borrelia burgdorferi Bol26]
gi|226736856|sp|B7J207|RNPA_BORBZ RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|215980981|gb|EEC21788.1| ribonuclease P protein component [Borrelia burgdorferi 156a]
gi|218164524|gb|ACK74585.1| ribonuclease P protein component [Borrelia burgdorferi ZS7]
gi|221191958|gb|EEE18179.1| ribonuclease P protein component [Borrelia burgdorferi 72a]
gi|223885493|gb|EEF56592.1| ribonuclease P protein component [Borrelia burgdorferi 64b]
gi|224512596|gb|EEF82972.1| ribonuclease P protein component [Borrelia burgdorferi WI91-23]
gi|225369801|gb|EEG99248.1| ribonuclease P protein component [Borrelia burgdorferi 118a]
gi|226232939|gb|EEH31692.1| ribonuclease P protein component [Borrelia burgdorferi Bol26]
gi|226233482|gb|EEH32221.1| ribonuclease P protein component [Borrelia burgdorferi 29805]
gi|312148295|gb|ADQ30954.1| ribonuclease P protein component [Borrelia burgdorferi JD1]
gi|312149734|gb|ADQ29805.1| ribonuclease P protein component [Borrelia burgdorferi N40]
Length = 119
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR KEA R E + D + + L + + + + V R +R K
Sbjct: 63 RRLFKEAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIESLMKGLVLRCERGIGESK 119
>gi|238028971|ref|YP_002913202.1| ribonuclease P protein component [Burkholderia glumae BGR1]
gi|237878165|gb|ACR30498.1| Ribonuclease P protein component [Burkholderia glumae BGR1]
Length = 157
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KKQ AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRSAHFVVYGKP---TGGDARLGLVVGKKQAPRAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA RL G D +L
Sbjct: 84 VKRLAREAFRLRRAEFA--GWDILLR 107
>gi|46447237|ref|YP_008602.1| hypothetical protein pc1603 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400878|emb|CAF24327.1| hypothetical protein pc1603 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 109
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
++ R+Q+ + G R + + L N ++G TVT++ G A +RNR +R ++E
Sbjct: 1 MRTRKQYQRMANGSSRYIGRWIILDL-RFNDRSHSQLGITVTRRFGKAHQRNRFKRIVRE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
A RL + + A +++ +E + + R Y
Sbjct: 60 AFRLSHHT-FPQALLLNVKPRTLAHQAKMQDIQAELMELINQAYRHYQK 107
>gi|189043734|sp|A9KBT3|RNPA_COXBN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
Length = 121
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 6 ILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRR 63
++ +F + G ++ L N R+G +K+ AV RNR+RR
Sbjct: 10 RIRTTAEFRRIYAARQRIIGRYYLLYY--RENEIKHSRLGVVASKRNVRKAVWRNRVRRV 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
+KE R+ + + D V++AK ++ KEL + + +R +
Sbjct: 68 VKETFRIRKKDL--PAFDIVVVAKASSVEADNKELYECINKLFTQLERQSKRSSS 120
>gi|254468359|ref|ZP_05081765.1| ribonuclease P protein component [beta proteobacterium KB13]
gi|207087169|gb|EDZ64452.1| ribonuclease P protein component [beta proteobacterium KB13]
Length = 110
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRM 60
S++ L F+ V R F + + N R G V KK AV RN M
Sbjct: 4 SSLTRLTNADDFSSVFILRKRFSGEF-INIFRKPNQLEYNRFGLIVGKKINKKAVARNYM 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
+R +++ +R D ++ K++ + + ++ + +
Sbjct: 63 KRVIRDVLRQFDNS---SKLDIIIQVKKNFHKKDYPLVKKDIHSFIKTHAK 110
>gi|134297401|ref|YP_001121136.1| ribonuclease P protein component [Burkholderia vietnamiensis G4]
gi|134140558|gb|ABO56301.1| ribonuclease P protein component [Burkholderia vietnamiensis G4]
Length = 153
Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLLR 106
>gi|218296524|ref|ZP_03497252.1| ribonuclease P protein component [Thermus aquaticus Y51MC23]
gi|218243066|gb|EED09598.1| ribonuclease P protein component [Thermus aquaticus Y51MC23]
Length = 79
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
RVG V+KK G AV RN+++ +R + +L+A +A F EL
Sbjct: 9 PEARVGIVVSKKVGKAVVRNKVK----RRLREILRRLHLPKAHILLVASPEAREAGFAEL 64
Query: 99 CNHFVERVRRN 109
V +R++
Sbjct: 65 FQDVVRALRKS 75
>gi|282889814|ref|ZP_06298353.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500388|gb|EFB42668.1| hypothetical protein pah_c004o215 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 86
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK 87
+E ++ R+G TV+KK G A +RNR +R ++EA R +L D + +
Sbjct: 1 MIEFCKRTHAQ--TRLGITVSKKYGKAHDRNRFKRTVREAFRT-CHHLLPPHLDLNVKPR 57
Query: 88 RDALFIPFKELCNHFVERVR 107
+ +++ + ++
Sbjct: 58 GFHKNLKTQDVQKEMLLLLQ 77
>gi|55980414|ref|YP_143711.1| ribonuclease P protein component [Thermus thermophilus HB8]
gi|55771827|dbj|BAD70268.1| ribonuclease P protein component [Thermus thermophilus HB8]
Length = 77
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 41 PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCN 100
RVG V+KK G AV RN+++ +R + +++A +A F EL
Sbjct: 9 LRVGIVVSKKVGKAVVRNKVK----RRLREILRRLHLPQAHLLVVASPEAREADFAELFR 64
Query: 101 HFVERVRRN 109
V +R++
Sbjct: 65 DVVRALRKS 73
>gi|222823563|ref|YP_002575137.1| ribonuclease P protein component [Campylobacter lari RM2100]
gi|222538785|gb|ACM63886.1| ribonuclease P protein component [Campylobacter lari RM2100]
Length = 81
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+ +KK G AV RNR +R L+ A V Y+L+AK IPF +L +
Sbjct: 12 KFAVVASKKVGKAVVRNRAKRLLRSAFFQVKNQVENGK--YILVAKTSIGEIPFLKLEKN 69
Query: 102 FVERVRRN 109
+++
Sbjct: 70 LKWGLKKI 77
>gi|225551972|ref|ZP_03772912.1| ribonuclease P protein component [Borrelia sp. SV1]
gi|225370970|gb|EEH00400.1| ribonuclease P protein component [Borrelia sp. SV1]
Length = 119
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G+L + +L++ +N R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLAYSRILVTFSKGFRGSVKRNRI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR KEA R E + D + + L + + + + V R +R K
Sbjct: 63 RRLFKEAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIESLMKGLVLRRERGIGESK 119
>gi|258593682|emb|CBE70023.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 122
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
+ +F+L + ++ F + G A RNR +R +E RL
Sbjct: 9 TARTRRAFNNKYFTLYARFASTKKQQLQLAF--GARTGTATVRNRAKRLARETFRLNCHR 66
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+ G + ++ A++ + +++ V+
Sbjct: 67 L-PAGIEILITAQKGIGALSRRDMRGQIVDLFE 98
>gi|225548631|ref|ZP_03769678.1| ribonuclease P protein component [Borrelia burgdorferi 94a]
gi|225370661|gb|EEH00097.1| ribonuclease P protein component [Borrelia burgdorferi 94a]
Length = 119
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G+L + +L++ +N + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGKLIRFSNLNLKMFYKSNHLVYSRILVTFSKGFRGSVKRNRL 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
RR KEA R E + D + + L + + + + V R +R K
Sbjct: 63 RRLFKEAFRKRLELLEGIALDIIFVVSYSKLTLTYFSIESLMKGLVLRCERGIGESK 119
>gi|91785813|ref|YP_561019.1| ribonuclease P [Burkholderia xenovorans LB400]
gi|123167870|sp|Q13SH2|RNPA_BURXL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|91689767|gb|ABE32967.1| ribonuclease P protein component [Burkholderia xenovorans LB400]
Length = 139
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 16/133 (12%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + N R+G + KK A RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVVYGRPTGNE---ARLGLVIGKKYAPRAATRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI--------AKRDALFIPFKEL-CNHFVERVRRNK 110
+RR +EA RL G D +L A A P + L + + +
Sbjct: 65 VRRIAREAFRLRRAEFG--GWDVLLRLHTRFDKKALPSASSPPLRALCRSEIEALLDKAA 122
Query: 111 RSYYSGKNFSRKS 123
R + ++
Sbjct: 123 REVTRREAPPAEA 135
>gi|326562318|gb|EGE12644.1| ribonuclease P protein component [Moraxella catarrhalis 103P14B1]
gi|326575522|gb|EGE25447.1| ribonuclease P protein component [Moraxella catarrhalis 101P30B1]
Length = 137
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRM 60
L F V ++K L L R+G + KK AV+RNR+
Sbjct: 23 QKYHRLLIPADFKAVFDSPVKKVHTLHLLAFIGQGQGLSARLGLAITKKKLKKAVDRNRL 82
Query: 61 RRRLKEAVRLCAEGV 75
+R +E R
Sbjct: 83 KRLCRENFRHRQASW 97
>gi|163754530|ref|ZP_02161652.1| RNase P protein, subunit A [Kordia algicida OT-1]
gi|161325471|gb|EDP96798.1| RNase P protein, subunit A [Kordia algicida OT-1]
Length = 131
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 2 SNICILKKRRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERN 58
LK ++ L+ G + K P + + + ++ + G +V ++ AV RN
Sbjct: 6 PKEEKLKSKKCLDLLFSEGGAVSKFPLRLVYIATDLPKDVQIQAGVSVTKRRFKKAVTRN 65
Query: 59 RMRRRLKEAVRLCAEGVLK-----HGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
R++R ++EA RL V + ++ I K+ F+E+ + +++
Sbjct: 66 RIKRLMREAYRLHKNDVFNTISTSYAFMFLYIGKK---EPTFEEIEKSMIRLLQKFLEKT 122
Query: 114 YSGKNFSRK 122
+ ++
Sbjct: 123 NTIDAPEKE 131
>gi|62262530|gb|AAX78080.1| unknown protein [synthetic construct]
Length = 152
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N + V T K A +RN RR +
Sbjct: 38 ILDKSEIQQAFDSVENKLSTLHFTFLLAKRNIKDPGLCVILT-KKNIKKATKRNLCRRII 96
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 97 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 143
>gi|260881792|ref|ZP_05405232.2| ribonuclease P protein component [Mitsuokella multacida DSM 20544]
gi|260847898|gb|EEX67905.1| ribonuclease P protein component [Mitsuokella multacida DSM 20544]
Length = 104
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
RVGF KK GCAV RNR++R L+EA RL + V + +L+ ++ + + +
Sbjct: 4 RVGFAAGKKLGCAVTRNRVKRLLREAYRLNQDRV-REDAALLLVGRKPIVDAKCQAVEQA 62
Query: 102 FVER 105
F++
Sbjct: 63 FLQI 66
>gi|115353268|ref|YP_775107.1| ribonuclease P protein component [Burkholderia ambifaria AMMD]
gi|115283256|gb|ABI88773.1| ribonuclease P protein component [Burkholderia ambifaria AMMD]
Length = 153
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLLR 106
>gi|299068434|emb|CBJ39658.1| Ribonuclease P protein component [Ralstonia solanacearum CMR15]
Length = 143
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
L K +F+ V +R+ F L V N + R+G + KK AVERN
Sbjct: 7 PKAARLVKTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R+ +E RL + G D ++
Sbjct: 65 IKRQCRELFRLRQAALG--GRDVLIR 88
>gi|56477032|ref|YP_158621.1| ribonuclease P protein component [Aromatoleum aromaticum EbN1]
gi|67461305|sp|Q5P4P2|RNPA_AZOSE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56313075|emb|CAI07720.1| Ribonuclease P protein component [Aromatoleum aromaticum EbN1]
Length = 119
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Query: 5 CILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRR 62
L+K +++ V KG FF N R+G + KK A RN ++R
Sbjct: 15 YRLRKTDEYSSVFAFRRAFKGRFFIAHY--RPNELGTARLGVVIAKKLAKRANVRNLLKR 72
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
++E R + HD V+ + + V + R +
Sbjct: 73 IVREQFRKARPALA--HHDLVVRLHVPVKMATRAMINDDVVNLLGRFR 118
>gi|120437641|ref|YP_863327.1| ribonuclease P protein component [Gramella forsetii KT0803]
gi|117579791|emb|CAL68260.1| ribonuclease P protein component [Gramella forsetii KT0803]
Length = 130
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 19 GELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCA---E 73
G+ K P + + NN+ N R G +V KK AV+RNR++R ++E R
Sbjct: 24 GKNIKSYPLKLVYIPINNSENPELRTGVSVPKKLVKTAVKRNRIKRLMREVYRKNKYLVT 83
Query: 74 GVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
L + ++ I + +++L ++ + R + ++ +
Sbjct: 84 KDLVSSYAFMFI-HISREEMTYEKLEQSMIKILERFREKIHTDEK 127
>gi|239906117|ref|YP_002952856.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
gi|239795981|dbj|BAH74970.1| ribonuclease P protein component [Desulfovibrio magneticus RS-1]
Length = 85
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR--DALFIPFKELCNHF 102
++KK G AV RNR++R ++E RLCA G D V++AK+ D + + +
Sbjct: 1 MAISKKVGNAVARNRVKRVVRECFRLCAPQ-AVAGLDVVVVAKKCLDPRRLDLHQAISDL 59
Query: 103 VERVRRNKRSYYSG 116
+ R +
Sbjct: 60 RPLLIRMAKDLDRP 73
>gi|300869649|ref|YP_003784520.1| ribonuclease P protein component [Brachyspira pilosicoli 95/1000]
gi|300687348|gb|ADK30019.1| ribonuclease P protein component [Brachyspira pilosicoli 95/1000]
Length = 138
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 3 NICILKKRRQFALVKKGE------LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE 56
LK ++ K FF++ L NN R T+ K + AV+
Sbjct: 30 RKEKLKSKKDIICFFKKNDNSNLLKYSNYFFTILALQNN--RSYSRFVVTIKKNKTNAVK 87
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR +R ++E R + G+DY +I R F + ++ R
Sbjct: 88 RNRAKRIVREIYRTEKNNI-PVGYDYFIIINRYI-SRSFLDYKKELMKLFYRI 138
>gi|313206817|ref|YP_004045994.1| ribonuclease p protein component [Riemerella anatipestifer DSM
15868]
gi|312446133|gb|ADQ82488.1| ribonuclease P protein component [Riemerella anatipestifer DSM
15868]
gi|315023890|gb|EFT36892.1| Ribonuclease P protein component [Riemerella anatipestifer RA-YM]
gi|325335743|gb|ADZ12017.1| ribonuclease P protein component [Riemerella anatipestifer RA-GD]
Length = 113
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNR 59
LK ++ + KG+ + L ++G +V+K A +RNR
Sbjct: 6 PKSEKLKSKKDITTLFEKGKWQTCGNIRLIF----TDAEASKIGVSVSKRYFKKATDRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKH----GHDYVLIAKRDALFIPFKELCNHFVERVRR 108
++R L+E RL E + H + + ++ + F++ ++
Sbjct: 62 VKRLLRECYRLNKELFHQKFGATPHAMIFWVSAEMPK-KYQLVEEDFIKLCKK 113
>gi|120602962|ref|YP_967362.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
gi|120563191|gb|ABM28935.1| ribonuclease P protein component [Desulfovibrio vulgaris DP4]
Length = 92
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ + R+G VT+K G AV+RNR++R L+E RL VL D + + KR
Sbjct: 1 MERSADPEGWRLGLAVTRKTGTAVQRNRVKRVLREFFRLHQH-VLPDDADIIAVPKR 56
>gi|203284350|ref|YP_002222090.1| ribonuclease P protein component [Borrelia duttonii Ly]
gi|203287884|ref|YP_002222899.1| ribonuclease P protein component [Borrelia recurrentis A1]
gi|254808049|sp|B5RLZ8|RNPA_BORDL RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|254808052|sp|B5RRP4|RNPA_BORRA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|201083793|gb|ACH93384.1| ribonuclease P protein component [Borrelia duttonii Ly]
gi|201085104|gb|ACH94678.1| ribonuclease P protein component [Borrelia recurrentis A1]
Length = 114
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 1 MSNICI-LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERN 58
M I +K R + + K G+ K ++ S + R+ T + AV+RN
Sbjct: 1 MKKRNINIKSRLEIQELFKKGQFVKIEGINIFY--RFTSLAISRILITFPRVFKGAVKRN 58
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
R+RR KE R + D++ + I + E+ +
Sbjct: 59 RVRRVFKECFREYFTLLKDGCADFIFVVYPQKANINYHEVKTILKNMI 106
>gi|171316347|ref|ZP_02905567.1| ribonuclease P protein component [Burkholderia ambifaria MEX-5]
gi|171098476|gb|EDT43278.1| ribonuclease P protein component [Burkholderia ambifaria MEX-5]
Length = 153
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++A RL G+D +L
Sbjct: 83 VKRLARDAFRLRRAEFA--GYDLLLR 106
>gi|315187340|gb|EFU21096.1| ribonuclease P protein component [Spirochaeta thermophila DSM
6578]
Length = 119
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
++ L + + + +G + L + N R+ F V + VERNR
Sbjct: 5 LTKKERLARPKDIQRLFLEGRKVRVKGAGLTFIEN--GRDYCRILFVVPRSIKSKVERNR 62
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +E VRL + +L G+D LI
Sbjct: 63 LKRVARECVRL-QKDLLPPGYDLALI 87
>gi|189348960|ref|YP_001944588.1| ribonuclease P [Burkholderia multivorans ATCC 17616]
gi|56798244|dbj|BAD82887.1| ribonuclease P protein component [Burkholderia multivorans]
gi|189332982|dbj|BAG42052.1| ribonuclease P [Burkholderia multivorans ATCC 17616]
Length = 135
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G V KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G+D +L
Sbjct: 65 VKRLAREAFRVRRAEFA--GYDLLLR 88
>gi|332143493|ref|YP_004429231.1| ribonuclease P [Alteromonas macleodii str. 'Deep ecotype']
gi|327553515|gb|AEB00234.1| ribonuclease P [Alteromonas macleodii str. 'Deep ecotype']
Length = 55
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
M+R ++E+ R + D ++I K A + +E+ + ++ +
Sbjct: 1 MKRLVRESFRHKQHNL--PNVDIIVIGKSGADNLSNQEVFATLDKLWKKLNKR 51
>gi|217970732|ref|YP_002355966.1| ribonuclease P protein component [Thauera sp. MZ1T]
gi|217508059|gb|ACK55070.1| ribonuclease P protein component [Thauera sp. MZ1T]
Length = 120
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRR 63
L K +++ V F + N R+G V KK A RN ++R
Sbjct: 15 HRLHKTDEYSSVFAFRRALRGRFYMLHY-RPNGLDTARLGVVVAKKLAKRANVRNLVKRI 73
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
+E R + + D V+ E+
Sbjct: 74 AREIFR--RQRIELPAMDLVVRLNAPVAKATRAEI 106
>gi|332286193|ref|YP_004418104.1| ribonuclease P [Pusillimonas sp. T7-7]
gi|330430146|gb|AEC21480.1| ribonuclease P [Pusillimonas sp. T7-7]
Length = 152
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 5 CILKKRRQFALVKKGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQG-CAVERNR 59
L + ++AL KG + +++ R+G + K+ +V RN
Sbjct: 39 ARLHRPSEYALALKGRRLARGALFVVTTPREGASDSAAPDARLGLIIAKRFAPQSVTRNA 98
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF----KELCNHFVERVRRNKR 111
++R ++EA R + D V + K++ + + + R R
Sbjct: 99 IKRVIREAFRNKRHEL--PARDLVFRLHSRVDPVSLTLLKKQVRDEVDQLLDRAMR 152
>gi|91215351|ref|ZP_01252322.1| ribonuclease P [Psychroflexus torquis ATCC 700755]
gi|91186303|gb|EAS72675.1| ribonuclease P [Psychroflexus torquis ATCC 700755]
Length = 118
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
N LK R+ + + G+ K + + + V + + AV+RNR+
Sbjct: 9 QNKEKLKSRKIIKYIFEEGKSIKTYPLLIRYVESELEYQQVGVSVS-KRNFKKAVDRNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDY-VLIAKRDALFIPFKELCNHFVERVRRNK 110
+R+L+EA RL +L Y V+I + +++ + K
Sbjct: 68 KRQLREAYRLHKSQILDKNKSYSVMILYIGKTHLESEKIHKVMHTLLNDIK 118
>gi|262278045|ref|ZP_06055832.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [alpha proteobacterium HIMB114]
gi|262223792|gb|EEY74257.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [alpha proteobacterium HIMB114]
Length = 108
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 10 RRQFALVKKGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNRMRRRLKEA 67
+F V G+ F++ + N+ + ++ KK G AV RNRMRRRLK A
Sbjct: 4 SSEFKEVLSGKKISSNLFTIFYKSKNSKDKKLAIQLSCVAAKKLGNAVRRNRMRRRLKMA 63
Query: 68 VRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
R + + Y + A+ F+ + + ++ +
Sbjct: 64 TRKAILEIGSKFEKKFKYAIFARPKIYDEEFQNIVDDLSSKLGKL 108
>gi|83721327|ref|YP_443731.1| ribonuclease P protein component [Burkholderia thailandensis E264]
gi|83655152|gb|ABC39215.1| ribonuclease P protein component [Burkholderia thailandensis E264]
Length = 155
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGREARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R G D +L
Sbjct: 84 VKRLAREAFRTRRAEFA--GWDILLR 107
>gi|219685113|ref|ZP_03539933.1| ribonuclease P protein component [Borrelia garinii Far04]
gi|219673209|gb|EED30228.1| ribonuclease P protein component [Borrelia garinii Far04]
Length = 111
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N+ + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R + D + + ++L + + + +
Sbjct: 63 RRLFKEAFRKRLVLLEDRAVDIIFVVSYNSLNLTYFSIESLIKNL 107
>gi|302870729|ref|YP_003839366.1| ribonuclease P protein component [Micromonospora aurantiaca ATCC
27029]
gi|315506967|ref|YP_004085854.1| ribonuclease p protein component [Micromonospora sp. L5]
gi|302573588|gb|ADL49790.1| ribonuclease P protein component [Micromonospora aurantiaca ATCC
27029]
gi|315413586|gb|ADU11703.1| ribonuclease P protein component [Micromonospora sp. L5]
Length = 108
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 36 NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
++ R GF V+K G AV RN++RRRL+ VR + G V+ A A +
Sbjct: 27 ETSAPSRAGFVVSKAVGGAVVRNKVRRRLRHLVRERLGEL-PAGTTLVVRALPAAADATY 85
Query: 96 KELCNHFV 103
L
Sbjct: 86 ARLGADLD 93
>gi|237749312|ref|ZP_04579792.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13]
gi|229380674|gb|EEO30765.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13]
Length = 125
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 8/120 (6%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K F+ V + + F + N R+G V K+ AV RN ++R
Sbjct: 10 RIVKTDDFSSVFRMRPRARTKHFVMYA--RPNQLESARLGIVVAKRFAHRAVTRNTIKRL 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
+E R D ++ +R + ++KS
Sbjct: 68 CRETFRCIQ----IPAMDCIIRLTSPVNTRKDPATNRQVKRILRAELDQLIASSGMNQKS 123
>gi|254797189|ref|YP_003082029.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
gi|254590427|gb|ACT69789.1| ribonuclease P protein component [Neorickettsia risticii str.
Illinois]
Length = 72
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
VGF VTKK G AV+RN++RR+L+ + Y+ I ++F F +
Sbjct: 2 VGFIVTKKVGSAVKRNKVRRKLRALLPFLISMKKLLNRAYIFIPSPASVFSDFSAIREDV 61
Query: 103 VERVRRNKRS 112
+ + R RS
Sbjct: 62 LSCLERAGRS 71
>gi|325989359|ref|YP_004249058.1| ribonuclease P [Mycoplasma suis KI3806]
gi|323574444|emb|CBZ40094.1| Ribonuclease P [Mycoplasma suis]
Length = 127
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 36/125 (28%), Gaps = 13/125 (10%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN-----NNNSNLLPRVGFTV-TKKQGC 53
M L+KR F + KG+ K + + R+G V KK
Sbjct: 1 MKKKYRLRKRSDFDEIFEKGKSIKTSNLIFLYIPEKSGNKEKNQNSLRIGVRVPKKKCKR 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK------RDALFIPFKELCNHFVERVR 107
AV+RN ++R + L L I F +L +
Sbjct: 61 AVDRNYLKRVIWATHSKLNLEELPPNSSIFLYTSFFLSKFSKVKKINFLDLERDVKKIYN 120
Query: 108 RNKRS 112
+
Sbjct: 121 TLSKR 125
>gi|219684195|ref|ZP_03539139.1| ribonuclease P protein component [Borrelia garinii PBr]
gi|219672184|gb|EED29237.1| ribonuclease P protein component [Borrelia garinii PBr]
Length = 111
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N+ + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R + D + + ++L + + + +
Sbjct: 63 RRLFKEAFRKRLVLLEGRAVDIIFVVSYNSLNLTYFSIESLIKNL 107
>gi|260890878|ref|ZP_05902141.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
gi|260859431|gb|EEX73931.1| ribonuclease P protein component [Leptotrichia hofstadii F0254]
Length = 81
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 4 ICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
I +KK + F+ + K + + + + N N+ R GF +KK G AV+RNR++R
Sbjct: 3 INKIKKSKDFSSIYNKSQKMHTKYAIIFIKENVNNEQ--RFGFVASKKTGNAVQRNRIKR 60
Query: 63 RLKEAVRLCAEGVLK 77
KE V++ + K
Sbjct: 61 IFKEFVKIHKDKFKK 75
>gi|188996898|ref|YP_001931149.1| ribonuclease P protein component [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931965|gb|ACD66595.1| ribonuclease P protein component [Sulfurihydrogenibium sp. YO3AOP1]
Length = 84
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRD 89
V N+ K +V+RNR +R L+EAVRL + +D + IAK+
Sbjct: 1 MVYLKNDQEKSRYAFVASKKNFKKSVDRNRAKRLLREAVRLRLNLLDNLKYDMIFIAKKS 60
Query: 90 ALFIPFKELCNHFVERVRRNKR 111
L ++ + + + K
Sbjct: 61 ILNKKIYDILSQLNTVIGKLKN 82
>gi|257461377|ref|ZP_05626473.1| ribonuclease P protein component [Campylobacter gracilis RM3268]
gi|257441100|gb|EEV16247.1| ribonuclease P protein component [Campylobacter gracilis RM3268]
Length = 79
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 42 RVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
+ +KK G +V RN +RRL+ A + + G ++LIAK+ + + F+++ +
Sbjct: 10 KFSAVASKKIGNSVTRNYAKRRLRAAFY-NQKDAIVSGI-FILIAKKRIIDMSFEDIERN 67
Query: 102 FVERVRRN 109
++
Sbjct: 68 LKWAFKKI 75
>gi|254431546|ref|ZP_05045249.1| ribonuclease P protein component [Cyanobium sp. PCC 7001]
gi|197625999|gb|EDY38558.1| ribonuclease P protein component [Cyanobium sp. PCC 7001]
Length = 127
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 12/121 (9%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN----------NNNSNLLPRVGFTVT- 48
+ LK +R F + KG GPF L + + R G ++
Sbjct: 3 LPQRHRLKGQRVFDSLYRKGRPMNGPFLMLRWQPARAELLPPEQRRHGSSPWRCGVVIST 62
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
K +V+RNR+RR L + +R G + +L + L E ++R
Sbjct: 63 KVHKRSVQRNRLRRLLHQHLRQQPIGREEGPVWLLLSLRPGCAERSSDALLEECQELLQR 122
Query: 109 N 109
Sbjct: 123 A 123
>gi|225010319|ref|ZP_03700791.1| ribonuclease P protein component [Flavobacteria bacterium MS024-3C]
gi|225005798|gb|EEG43748.1| ribonuclease P protein component [Flavobacteria bacterium MS024-3C]
Length = 153
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 5 CILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRR 62
LK + + + L + N N + + F+V+K AV+RNR++R
Sbjct: 39 ERLKSAKSIEYLFSEGKAISAYPLRLVFIANPNGSGPMQCAFSVSKRHFKKAVDRNRIKR 98
Query: 63 RLKEAVRLCAEGV 75
L+ + R +
Sbjct: 99 LLRASYRKIKPAL 111
>gi|111115268|ref|YP_709886.1| ribonuclease P protein component [Borrelia afzelii PKo]
gi|122956368|sp|Q0SN68|RNPA_BORAP RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|110890542|gb|ABH01710.1| ribonuclease P protein component [Borrelia afzelii PKo]
Length = 111
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSNLNLKMFCKSNHLIYSRLLVTFSKSFRGSVKRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R E + D + + D L + + + +
Sbjct: 63 RRLFKEAFRKRLELLEGRAIDIIFVVYYDRLDLTYFSIESLMKSL 107
>gi|323436011|ref|ZP_08088226.1| ribonuclease P protein component [Dokdonia donghaensis MED134]
gi|321496326|gb|EAQ39654.2| ribonuclease P protein component [Dokdonia donghaensis MED134]
Length = 126
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC---AVER 57
LK ++ + +G K L + +V+ + AV R
Sbjct: 6 PRKEKLKSKKLIEALFIEGRSVKSFPLRLIYMETPLKEEGISHQVSVSVSKRNFKLAVSR 65
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYV-LIAKRDALFIPFKELCNHFVERVRR 108
NR++R ++E+ RL + + G +V LI + ++L V+ ++R
Sbjct: 66 NRIKRLMRESYRLHKDQICIKGTTFVMLIIYTGREEVSQQQLHKAMVKLIKR 117
>gi|257466627|ref|ZP_05630938.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
gi|315917782|ref|ZP_07914022.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
gi|313691657|gb|EFS28492.1| ribonuclease P protein component [Fusobacterium gonidiaformans ATCC
25563]
Length = 76
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 39 LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR----DALFIP 94
+ GF +KK G AV RNR++R +E ++ +L ++L+AK+ + I
Sbjct: 2 NHNQYGFVASKKIGNAVCRNRIKRLFREFIKQNE-ILLPKSTTFILVAKKKSGEEIKTIK 60
Query: 95 FKELCNHFVERVR 107
++++ + +
Sbjct: 61 YEQIEKDLYKIFK 73
>gi|325286213|ref|YP_004262003.1| Ribonuclease P protein component [Cellulophaga lytica DSM 7489]
gi|324321667|gb|ADY29132.1| Ribonuclease P protein component [Cellulophaga lytica DSM 7489]
Length = 136
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
LK R+ + G+ L L + N +VG +V K+ AV+RNR++R L
Sbjct: 20 LKSRKLIGELFADGKSVSSYPVKLIYLPCSLQNTPLKVGVSVPKRNFKSAVDRNRIKRLL 79
Query: 65 KEAVRLCAEGVLKH-GHDY-VLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+E RL + + D+ +L + E+ E + + +
Sbjct: 80 REGYRLNKHVIFNNIDKDFALLFLYLGKKMPDYAEIEKSVAEVLAKFYKK 129
>gi|326772845|ref|ZP_08232129.1| ribonuclease P protein component [Actinomyces viscosus C505]
gi|326637477|gb|EGE38379.1| ribonuclease P protein component [Actinomyces viscosus C505]
Length = 122
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Query: 5 CILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPR-VGFTVTKKQGCAVERNRMRR 62
L + F +++G + + P VG V KKQ R +
Sbjct: 6 HRLARGEDFTTAIRRGTRCGNRRLVVHYHAGGRGDDSPALVGVVVPKKQVPLATRRNRVK 65
Query: 63 RLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
R A+ G L+ G V+ A L + R + G
Sbjct: 66 RRVRALMAQRVGSLEPGARVVVRGLAGADGADSSTLGRDLDRLLSRCRERQAEGHRR 122
>gi|187479883|ref|YP_787908.1| ribonuclease P [Bordetella avium 197N]
gi|123513534|sp|Q2KTI7|RNPA_BORA1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|115424470|emb|CAJ51024.1| ribonuclease P protein component [Bordetella avium 197N]
Length = 120
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 1 MSNICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
+ L + +F KG +G F + ++ R+G + K+ A RN
Sbjct: 6 LPAEARLHRPSEFTAALKGRRLARGALFIVSAAPATSAPACARLGLVIAKRYAALATTRN 65
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNH 101
++R L+EA R + + DYV+ + L
Sbjct: 66 AIKRVLREAFRHRRQALPAQ--DYVIRLHSKVGPLSLTALKRA 106
>gi|237810281|ref|YP_002894732.1| ribonuclease P [Burkholderia pseudomallei MSHR346]
gi|237505083|gb|ACQ97401.1| ribonuclease P [Burkholderia pseudomallei MSHR346]
Length = 155
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGRDARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G D +L
Sbjct: 84 VKRLAREAFRMRRAEFA--GWDILLR 107
>gi|332291794|ref|YP_004430403.1| ribonuclease P protein component [Krokinobacter diaphorus 4H-3-7-5]
gi|332169880|gb|AEE19135.1| ribonuclease P protein component [Krokinobacter diaphorus 4H-3-7-5]
Length = 127
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRV--GFTVTKKQGC-AVER 57
LK ++ + +G K + + S V G +V+K+ AV R
Sbjct: 6 PKAEKLKSKKLIDTLFIEGRSVKSFPLRMVYIETPLSTDAYMVQAGVSVSKRNFKLAVSR 65
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDY-VLIAKRDALFIPFKELCNHFVERVRR 108
NR++R ++E+ RL + + G + +LI +P L V+ ++R
Sbjct: 66 NRIKRLMRESYRLHKDLIDTKGTTFAMLILYTGQEEVPQAVLHKAMVKLIKR 117
>gi|206895084|ref|YP_002247366.1| ribonuclease P protein component [Coprothermobacter proteolyticus
DSM 5265]
gi|254808061|sp|B5Y9B9|RNPA_COPPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|206737701|gb|ACI16779.1| ribonuclease P protein component [Coprothermobacter proteolyticus
DSM 5265]
Length = 119
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L+ ++ F+ V K G + + + + L + RV V+K+ G AV RNR
Sbjct: 1 MRRSLRLQGKKNFSRVYKEGSVVRSDYVVVYFLPASEQ----RVAVVVSKRFGNAVRRNR 56
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP---FKELCNHFVERVR 107
+RR L EA + L G+ Y+++ + L + ++ +
Sbjct: 57 IRRLLLEAWQEN-HDHLPSGY-YIILPRSSLLSVEENVWRSKVKELFHEWQ 105
>gi|159027292|emb|CAO89387.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 60
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
NR++R+++ +R + G ++I + A+ ++ + + +
Sbjct: 4 NRLKRQIRAVIRELLPEIAT-GWRGIIIIRPGAIECNYEHFLRELKQLLVKA 54
>gi|312200979|ref|YP_004021040.1| ribonuclease P protein component [Frankia sp. EuI1c]
gi|311232315|gb|ADP85170.1| ribonuclease P protein component [Frankia sp. EuI1c]
Length = 131
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
+ R + A V +G R + + + R GF V++K G AV RN++RRRL+
Sbjct: 7 RVASRAEHAQVGRGGRRFSCHPLVVHALRTDDSGPARAGFVVSRKVGAAVTRNQVRRRLR 66
Query: 66 EAVRLCAEGVLKHGHDYVLI 85
E R V G V+
Sbjct: 67 EQTRSRLASV-PAGTLLVIR 85
>gi|302336555|ref|YP_003801761.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
gi|301633740|gb|ADK79167.1| ribonuclease P protein component [Spirochaeta smaragdinae DSM
11293]
Length = 115
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
+K V R +++ N+ R T+ +K G AV+RNR +R +E
Sbjct: 1 MKHSADIGRVFSSRTRVS-CLGAKLMYRTNNTERNRFTVTLVRKYGNAVQRNRAKRVARE 59
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
A RL + + G+D VL+ R + + + + + +
Sbjct: 60 AYRLIKPEI-RQGYDMVLLLYRSEDTLSNR--SRQLSDLLHKAQ 100
>gi|325973710|ref|YP_004250774.1| ribonuclease P [Mycoplasma suis str. Illinois]
gi|323652312|gb|ADX98394.1| ribonuclease P [Mycoplasma suis str. Illinois]
Length = 127
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 13/125 (10%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLN-----NNNSNLLPRVGFTV-TKKQGC 53
M L+K+ F + KG+ K + + R+G V KK
Sbjct: 1 MKKKYRLRKKSDFDEIFEKGKSIKTSNLIFLYIPEKSGNKEKNQNSLRIGVRVPKKKCKR 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAK------RDALFIPFKELCNHFVERVR 107
AV+RN ++R + L L I F +L +
Sbjct: 61 AVDRNYLKRVIWATHSKLNLEELPPNSSIFLYTSFFLSKFSKVKKINFLDLERDVKKIYN 120
Query: 108 RNKRS 112
+
Sbjct: 121 TLSKR 125
>gi|94263633|ref|ZP_01287442.1| ribonuclease P protein [delta proteobacterium MLMS-1]
gi|93455938|gb|EAT06093.1| ribonuclease P protein [delta proteobacterium MLMS-1]
Length = 129
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGCAVE 56
+ +++K ++ + + G +G F+L + + R+G +V+ + AV
Sbjct: 9 LPKSALIRKPDEYRQLYRRGRRVRGDNFALVYRLVEPSAAAAAGARLGISVSGVRS-AVR 67
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDAL 91
RNR++R ++E RL + G + + +RD
Sbjct: 68 RNRIKRLIREFFRLRRPLLH-PGLELIFTVRRDFK 101
>gi|118602998|ref|YP_904213.1| ribonuclease P protein component [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567937|gb|ABL02742.1| ribonuclease P protein component [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 106
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
+ + + +++ PR+ ++KK AV+RNR++R +E R
Sbjct: 10 YKAIFNHGKMTKGQYW-KIIAKKIDRPTPRLRLVISKKVHKLAVDRNRVKRIARETFRTH 68
Query: 72 AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ + ++V++ K + + + ++
Sbjct: 69 QNDL--NHWEFVVMVKHS-KPTKNSIITDDLLHLFKKI 103
>gi|76810255|ref|YP_331718.1| ribonuclease P protein component [Burkholderia pseudomallei 1710b]
gi|134281555|ref|ZP_01768263.1| ribonuclease P protein component [Burkholderia pseudomallei 305]
gi|254186621|ref|ZP_04893138.1| ribonuclease P protein component [Burkholderia pseudomallei Pasteur
52237]
gi|254194650|ref|ZP_04901081.1| ribonuclease P protein component [Burkholderia pseudomallei S13]
gi|76579708|gb|ABA49183.1| ribonuclease P protein component [Burkholderia pseudomallei 1710b]
gi|134247222|gb|EBA47308.1| ribonuclease P protein component [Burkholderia pseudomallei 305]
gi|157934306|gb|EDO89976.1| ribonuclease P protein component [Burkholderia pseudomallei Pasteur
52237]
gi|169651400|gb|EDS84093.1| ribonuclease P protein component [Burkholderia pseudomallei S13]
Length = 155
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGRDARLGLVIGKKYAARAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R G D +L
Sbjct: 84 VKRLAREAFRTRRAEFA--GWDILLR 107
>gi|228470765|ref|ZP_04055613.1| ribonuclease P [Porphyromonas uenonis 60-3]
gi|228307438|gb|EEK16443.1| ribonuclease P [Porphyromonas uenonis 60-3]
Length = 252
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 13/133 (9%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP-------RVGFTVTKKQG 52
+ L R + + +G + L + P + ++
Sbjct: 16 LPKGERLYLREEIERLHDRGRSFVSYPIRVVWLAEPIATHSPGEQAQVAVMTSVAKRRFK 75
Query: 53 CAVERNRMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFI--PFKELCNHFVERVR 107
AV+RNR++R + A RL + H V +A + + EL +
Sbjct: 76 HAVDRNRIKRMTRSAYRLHKAPLWQVATQHHCTVRLALQSVAKTMPTYSELEQAVERAIA 135
Query: 108 RNKRSYYSGKNFS 120
R + S
Sbjct: 136 RIVKEIDKSSPTS 148
>gi|107024096|ref|YP_622423.1| ribonuclease P protein component [Burkholderia cenocepacia AU 1054]
gi|116691182|ref|YP_836805.1| ribonuclease P protein component [Burkholderia cenocepacia HI2424]
gi|206558827|ref|YP_002229587.1| ribonuclease P protein component [Burkholderia cenocepacia J2315]
gi|105894285|gb|ABF77450.1| ribonuclease P protein component [Burkholderia cenocepacia AU 1054]
gi|116649271|gb|ABK09912.1| ribonuclease P protein component [Burkholderia cenocepacia HI2424]
gi|198034864|emb|CAR50736.1| ribonuclease P protein component [Burkholderia cenocepacia J2315]
Length = 153
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQPARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLLR 106
>gi|319952960|ref|YP_004164227.1| ribonuclease p protein component [Cellulophaga algicola DSM 14237]
gi|319421620|gb|ADV48729.1| ribonuclease P protein component [Cellulophaga algicola DSM 14237]
Length = 139
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 2 SNICILKKRRQFALVK-KGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERN 58
S LK ++ F ++ +G+ P + V + N+ + G TV+K+ AV+RN
Sbjct: 10 SRAEKLKSKKLFEIMFTEGKSVANFPLRVIYVKTDFKDNVPIKAGVTVSKRNFKSAVKRN 69
Query: 59 RMRRRLKEAVRLCAEGVLKHGHD--YVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
R++R L+EA RL V+ + D +LI + + + +
Sbjct: 70 RIKRILREAYRLNKSIVINNSTDKYALLILYLGKEMPESHVIHQKMEVLLEKFVKKISQE 129
Query: 117 KNFS 120
Sbjct: 130 PIKQ 133
>gi|117929367|ref|YP_873918.1| ribonuclease P protein component [Acidothermus cellulolyticus 11B]
gi|166226695|sp|A0LWX2|RNPA_ACIC1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|117649830|gb|ABK53932.1| ribonuclease P protein component [Acidothermus cellulolyticus 11B]
Length = 120
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 1 MSNICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ + L++ F V ++G G + + + ++ P+ GF V + G AV RNR
Sbjct: 2 LPSRYRLRRSSDFKAVLRRGRRVAGRYIVVYLSTSDTDRPGPQAGFVVGRNVGGAVVRNR 61
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+RRRL+ V V+ V+ A A F EL F + R ++ S
Sbjct: 62 IRRRLRHIVAARLA-VIPARKRIVVRALPAAAAASFAELAAEFDRLLGRLTQTKNSQ 117
>gi|260061318|ref|YP_003194398.1| hypothetical protein RB2501_06955 [Robiginitalea biformata
HTCC2501]
gi|88785450|gb|EAR16619.1| hypothetical protein RB2501_06955 [Robiginitalea biformata
HTCC2501]
Length = 128
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLP-RVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEG 74
+KG K L L +P + GF V + AV+RNR++R ++EA RL G
Sbjct: 23 RKGRTVKAYPLLLYYLETPLPEPVPFQAGFAVPKRSFRKAVQRNRIKRLMREAFRLEKPG 82
Query: 75 VL---KHGHDYVL--IAKRDALFIPFKELCNHFVERVRR 108
K +V+ I + F+ + +++
Sbjct: 83 TFNNTKGSFAFVILYIGREM---PDFEGVSKATNILLKK 118
>gi|332664718|ref|YP_004447506.1| ribonuclease P protein component [Haliscomenobacter hydrossis DSM
1100]
gi|332333532|gb|AEE50633.1| Ribonuclease P protein component [Haliscomenobacter hydrossis DSM
1100]
Length = 136
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVT---KKQGCAVER 57
LK + K G+ L N FTV+ KK AV+R
Sbjct: 4 RREERLKSWSAIGRMFKEGQSFGQYPLRFVWLPVEPENTSFPAQFTVSVPKKKFKKAVDR 63
Query: 58 NRMRRRLKEAVRLCAEGVLK-----HGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
NR+RR+++EA RL + + + +++ + + E+ + +RR +
Sbjct: 64 NRLRRQIREAYRLNKQLLYRNLDPSQKVYALMVIYVAKETVEYTEIETNMHRGLRRLGKI 123
Query: 113 YYSGKNFSRK 122
+N +
Sbjct: 124 LRDQQNQPTQ 133
>gi|78067991|ref|YP_370760.1| ribonuclease P protein [Burkholderia sp. 383]
gi|77968736|gb|ABB10116.1| ribonuclease P protein component [Burkholderia sp. 383]
Length = 153
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + S R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKPTGES---ARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLLR 106
>gi|56707392|ref|YP_169288.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669863|ref|YP_666420.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis FSC198]
gi|208780037|ref|ZP_03247380.1| ribonuclease P protein component [Francisella novicida FTG]
gi|56603884|emb|CAG44868.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320196|emb|CAL08251.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis FSC198]
gi|208744041|gb|EDZ90342.1| ribonuclease P protein component [Francisella novicida FTG]
Length = 133
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N + V T K A +RN RR +
Sbjct: 28 ILDKSEIQQAFDSVENKLSTLHFTFLLAKRNIKDPGLCVILT-KKNIKKATKRNLCRRII 86
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 87 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 133
>gi|289642464|ref|ZP_06474609.1| ribonuclease P protein component [Frankia symbiont of Datisca
glomerata]
gi|289507723|gb|EFD28677.1| ribonuclease P protein component [Frankia symbiont of Datisca
glomerata]
Length = 155
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNL----------LPRVGFTVTKKQGC 53
++ R + A + G + + L +N + PRVGF V +K G
Sbjct: 6 NRVRTRAEHASISGAGRRGRSGPLVIHSLIVDNHAVDGGPEPVVTLPPRVGFVVGRKVGN 65
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV RNR+RRRL+E VR + + G ++ A ++ EL +R
Sbjct: 66 AVVRNRVRRRLREQVRARLDRL-PAGTLVIVRALPESATASSDELGRALERGLR 118
>gi|224534811|ref|ZP_03675383.1| ribonuclease P protein component [Borrelia spielmanii A14S]
gi|224514059|gb|EEF84381.1| ribonuclease P protein component [Borrelia spielmanii A14S]
Length = 111
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N + R+ T +K +V+RN +
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSSLNLKMFYKSNHLIYSRILVTFSKSFRGSVKRNLV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R E + D + + + L + + + +
Sbjct: 63 RRLFKEAFRKRLELLEGRAIDIIFVVYYNRLDLTYFNIESLMKSL 107
>gi|13508420|ref|NP_110370.1| RNaseP C5 chain [Mycoplasma pneumoniae M129]
gi|2500594|sp|P75111|RNPA_MYCPN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|1673822|gb|AAB95809.1| RNaseP C5 chain [Mycoplasma pneumoniae M129]
Length = 118
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
L+ R+ FA + + + R F + N R +++K + AVERN +
Sbjct: 4 KTKHHLRDRKVFAALLRSKRRFFSTFLMAYFM-PNRVRTWRAAVSISKTKYKLAVERNLI 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
RR++K +R + + D ++I + L + FKE F+ ++ +
Sbjct: 63 RRQVKAIMREQFCNL--NAVDVLVIINQGFLELTFKEKQTIFLNLCQKLQ 110
>gi|319788689|ref|YP_004148164.1| ribonuclease P protein component [Pseudoxanthomonas suwonensis
11-1]
gi|317467201|gb|ADV28933.1| ribonuclease P protein component [Pseudoxanthomonas suwonensis
11-1]
Length = 138
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRM 60
++ R ++ V +G R G + PR+G V++K AV RNR+
Sbjct: 10 PRSARVRLRVEYTRVFEGGRRLGDSLIGLHWLPGDGE--PRLGLAVSRKVDPRAVGRNRI 67
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+R L++ +R G+ G DYV++A+ A +++ F+ +R+
Sbjct: 68 KRALRDCMRHHRAGMA--GGDYVVVARPAAARATGEQIRQSFLRLLRK 113
>gi|89889715|ref|ZP_01201226.1| hypothetical protein BBFL7_01533 [Flavobacteria bacterium BBFL7]
gi|89517988|gb|EAS20644.1| hypothetical protein BBFL7_01533 [Flavobacteria bacterium BBFL7]
Length = 125
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMR 61
LK ++ L+ V N N + ++G +V+K+ A +RNR++
Sbjct: 7 KETKLKSKKSIELLFTEGSSIRKGPIRCVYNLINMDQPHKIGVSVSKRFFKKAPDRNRIK 66
Query: 62 RRLKEAVRLCAEGVLKH 78
R L+EA RL ++
Sbjct: 67 RLLREAYRLNQHDLITP 83
>gi|254298584|ref|ZP_04966035.1| ribonuclease P protein component [Burkholderia pseudomallei 406e]
gi|157808593|gb|EDO85763.1| ribonuclease P protein component [Burkholderia pseudomallei 406e]
Length = 136
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGRDARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R+ G D +L
Sbjct: 65 VKRLAREAFRMRRAEFA--GWDILLR 88
>gi|51598695|ref|YP_072883.1| ribonuclease P protein component [Borrelia garinii PBi]
gi|60390345|sp|Q661I0|RNPA_BORGA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51573266|gb|AAU07291.1| ribonuclease P protein component [Borrelia garinii PBi]
Length = 111
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N+ + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSNLNLKMFFKSNNLIYSRLLVTFSKGFRGSVKRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R E + D + + + L + + + +
Sbjct: 63 RRLFKEAFRKRLELLEGRAVDIIFVVSYNRLNLTYFRIESLIKNL 107
>gi|82703891|ref|YP_413457.1| ribonuclease P protein component [Nitrosospira multiformis ATCC
25196]
gi|82411956|gb|ABB76065.1| ribonuclease P protein component [Nitrosospira multiformis ATCC
25196]
Length = 86
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 28 SLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA 86
L+V N L R+G V K + AV RNR++R L+E R E + G D V+
Sbjct: 1 MLQVFAKPNGLLHSRLGLIVAGKIERLAVNRNRVKRVLREVFRARQEDMA--GLDLVMRL 58
Query: 87 KRDALFIPFKELCNHFVERVRRNKRSYY 114
+ A +L + + R ++
Sbjct: 59 RCRASDRSPVQLADEARRLMIRLQQCRE 86
>gi|304373459|ref|YP_003856668.1| Ribonuclease P protein component [Mycoplasma hyorhinis HUB-1]
gi|304309650|gb|ADM22130.1| Ribonuclease P protein component [Mycoplasma hyorhinis HUB-1]
gi|330723620|gb|AEC45990.1| ribonuclease P protein component [Mycoplasma hyorhinis MCLD]
Length = 116
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 7/120 (5%)
Query: 1 MSNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M N ++K QF + + L +G ++ KK AV+RN
Sbjct: 1 MLNFKKVRKNWQFQNIINFKQQIVNKELILYY----KEFFQFELGISIPKKFVNAVKRNY 56
Query: 60 MRRRLKEAVRLCAEGV--LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGK 117
+R++K ++ + +LI ++ L + FK + + + K
Sbjct: 57 YKRQIKIIIQNYLKNKKEFNVKFQIILITRKSFLNLDFKTKEIKIKNILNELENIWNKRK 116
>gi|154148741|ref|YP_001406232.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(protein C5) [Campylobacter hominis ATCC BAA-381]
gi|153804750|gb|ABS51757.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Campylobacter hominis ATCC BAA-381]
Length = 69
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 43 VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
+ KK G AV RN RR +K + +Y+ I K F ++
Sbjct: 1 MAVITGKKIGNAVVRNHSRRVIKSIFYNLRNEISCG--EYIFIVKSKISQTNFSQIEKSL 58
Query: 103 VERVRRN 109
++R
Sbjct: 59 KWALKRL 65
>gi|224531678|ref|ZP_03672310.1| ribonuclease P protein component [Borrelia valaisiana VS116]
gi|224511143|gb|EEF81549.1| ribonuclease P protein component [Borrelia valaisiana VS116]
Length = 111
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
LK + + + K G L + +L++ +N + R+ T +K +V+RNR+
Sbjct: 3 KRNISLKSKIEIQKIFKEGNLIRFSNLNLKMFCKSNDLIYSRLLVTFSKGFRGSVKRNRV 62
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
RR KEA R E D + + + + + +
Sbjct: 63 RRLFKEAFRKRLELSEGKAVDIIFVVSYNRPNFTYFGIESLMKSL 107
>gi|146298731|ref|YP_001193322.1| ribonuclease P protein component [Flavobacterium johnsoniae UW101]
gi|146153149|gb|ABQ04003.1| ribonuclease P protein component [Flavobacterium johnsoniae UW101]
Length = 132
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 7/128 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPF--FSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERN 58
LK + L+ + + +VG +V+K AV+RN
Sbjct: 6 PKNERLKSKTTIGLLFSEGKSVSKYPLRLVYRQAEEAYQGNTKVGVSVSKKYFKKAVDRN 65
Query: 59 RMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
+R L+E RL + L + ++L + + ++E+ ++ +
Sbjct: 66 YFKRVLRETYRLNKHLLLDNLDKPYSFMLF-YQSKDRLSYEEINTKTIQLFEKFVLQINK 124
Query: 116 GKNFSRKS 123
+ +++
Sbjct: 125 PADSEKEN 132
>gi|134096618|ref|YP_001101693.1| putative RNase P, protein C5 component, processes tRNA, 4.5S RNA
(partial) [Herminiimonas arsenicoxydans]
gi|133740521|emb|CAL63572.1| putative ribonuclease P rnpA [Herminiimonas arsenicoxydans]
Length = 136
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 8/104 (7%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K +F+ V + + + F L R+G K+ AV RN ++R
Sbjct: 14 RIVKTDEFSSVFRLRPVYRTAHFVLYA--RQTDLPHARLGVVAAKRLAPRAVTRNTIKRV 71
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
+E R D ++ + +R
Sbjct: 72 TRELFRQT----ALPSIDCIVRLSQPVNTKKGPATTASLKVALR 111
>gi|300775420|ref|ZP_07085282.1| possible ribonuclease P [Chryseobacterium gleum ATCC 35910]
gi|300506160|gb|EFK37296.1| possible ribonuclease P [Chryseobacterium gleum ATCC 35910]
Length = 123
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTK-KQGCAVER 57
LKK + +L+ KG+ R + +L + S +P + G +V+K AV R
Sbjct: 7 PRAEKLKKNTEISLLFEKGKWRTSGNLRIIILKDKPSIPIPTGKFGVSVSKRYFKRAVHR 66
Query: 58 NRMRRRLKEAVRLCA 72
NR++R L+E RL
Sbjct: 67 NRIKRLLRECYRLNK 81
>gi|149193810|ref|ZP_01870908.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
gi|149135763|gb|EDM24241.1| hypothetical protein CMTB2_01958 [Caminibacter mediatlanticus TB-2]
Length = 84
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
FF L +L++N + P V ++K AV RN+++RR++ VR+ ++
Sbjct: 3 TKFFILYILSSNEFKVSPVVSKKISK---KAVIRNKIKRRVRNLVRIFFSKGH-----FL 54
Query: 84 LIAKRDALFIPFKELCNHF 102
+I K D I F EL N F
Sbjct: 55 VIVKEDISTIDFIELENDF 73
>gi|255037599|ref|YP_003088220.1| ribonuclease P protein component [Dyadobacter fermentans DSM 18053]
gi|254950355|gb|ACT95055.1| ribonuclease P protein component [Dyadobacter fermentans DSM 18053]
Length = 152
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-- 81
PF L + + + LP+V F+++K AV+RN +RRR +EA RL + +
Sbjct: 49 PFRLLYIYDQQSPPPLPQVLFSISKRHFKKAVDRNLIRRRCREAYRLHKSALAALPAETR 108
Query: 82 --YVLIAKRDALFIPFKELCNHFVERVRRNKR 111
Y+ + + + +++ ++
Sbjct: 109 PSYIAFLYLAKEITSYDVIETAMKQSLKKLEK 140
>gi|52843197|ref|YP_096996.1| ribonuclease P protein component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630308|gb|AAU29049.1| ribonuclease P protein component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 62
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
A +RNR++R L+E+ R D +++A+ + + +
Sbjct: 3 AKAHDRNRIKRLLRESFRHT----NLPAVDIIILARPGLAKKTNLGINTKLNKTWEKL 56
>gi|213026873|ref|ZP_03341320.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 57
Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
NR++R +E+ RL + D+V++AK+ + + L + RR+ R
Sbjct: 1 NRIKRLTRESFRLRQHEL--PAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS 57
>gi|124010240|ref|ZP_01694895.1| ribonuclease P protein component [Microscilla marina ATCC 23134]
gi|123983732|gb|EAY24164.1| ribonuclease P protein component [Microscilla marina ATCC 23134]
Length = 122
Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 13/116 (11%)
Query: 5 CILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMR 61
LK ++ + P +L+ SN P+V FTV + AV+RN ++
Sbjct: 9 ERLKSKKIIQSLFPKGKDAFVYPIKVKYILHPTPSNTPPQVLFTVPKRTFKRAVDRNAIK 68
Query: 62 RRLKEAVRLCAEGVLKHGHDY-------VLIAKRDALFIPFKELCNHFVERVRRNK 110
R LKEA RL + Y V IAK +PF + + R K
Sbjct: 69 RLLKEAYRLNKHLLHDEAGSYKIAYIAFVYIAK---EKLPFDTIERKTISVFERLK 121
>gi|170734515|ref|YP_001766462.1| ribonuclease P protein component [Burkholderia cenocepacia MC0-3]
gi|169817757|gb|ACA92340.1| ribonuclease P protein component [Burkholderia cenocepacia MC0-3]
Length = 153
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + L R+G + KK AV RN
Sbjct: 26 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGQLARLGLVIGKKYAPRAVTRNL 82
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++ RL G+D +L
Sbjct: 83 VKRLARDQFRLRRAEFA--GYDLLLR 106
>gi|332879703|ref|ZP_08447394.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682330|gb|EGJ55236.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 125
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 9/114 (7%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L KR + + + L ++ +V ++ AV RNR
Sbjct: 5 PKREKLCKRTHIQQLFAEADSLSSYPLRLLYAPIPALEAPYQLLISVPKRQFKRAVHRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHG----HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
++R ++E RL + + I K +P++ + E +RR
Sbjct: 65 LKRLIRECYRLQKHLLPPPKQPCALALIYIGK---EELPYQAIYERVGELMRRL 115
>gi|317123174|ref|YP_004103177.1| ribonuclease P protein component [Thermaerobacter marianensis DSM
12885]
gi|315593154|gb|ADU52450.1| ribonuclease P protein component [Thermaerobacter marianensis DSM
12885]
Length = 191
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 53/171 (30%), Gaps = 49/171 (28%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLL------------------- 40
+ L++ F V++ G + +L +
Sbjct: 3 LPRTWRLRRGDDFRQVRRAGRSWANRWVALYAWRPATAAGAGPGEARMVRAASPAGAAGV 62
Query: 41 ----------------------------PRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
RVGFTV ++ G AV RNR+RR L EA R A
Sbjct: 63 PGDPAGGPGGPAIRVGRFGPTAAAAVPVTRVGFTVGRRLGKAVRRNRVRRLLAEAYRQLA 122
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSRKS 123
V + G V++A+ A + +K + + + + R +
Sbjct: 123 PRV-EPGWWLVVVARDAAAGMDWKTARRALEDVLGKARLLRPPATGGLRDA 172
>gi|194323998|ref|ZP_03057773.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida FTE]
gi|194321895|gb|EDX19378.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida FTE]
Length = 133
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N V T K A +RN RR +
Sbjct: 28 ILDKSEIQQAFDSVESKLSTLHFTFLLAKRNIKEPGLCVILT-KKNIKKATKRNLCRRII 86
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 87 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 133
>gi|321311062|ref|YP_004193391.1| ribonuclease P protein component [Mycoplasma haemofelis str.
Langford 1]
gi|319802906|emb|CBY93552.1| ribonuclease P protein component [Mycoplasma haemofelis str.
Langford 1]
Length = 121
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 1 MSNICILKKRRQF-ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
M L KR F +K+G F L + +S + KK + R
Sbjct: 1 MKKKYRLLKRPDFEKTLKRGTKVSSSNFICYYLKDLSSLNIRIGIIIPKKKCKSSPNRKY 60
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF------IPFKELCNHFVERVRRNKRSY 113
++R R V + + L + F+E+ F+ R +
Sbjct: 61 LKRLFWAFSREENLNFF-PKVKCVFFYRSEFLQNFSKKRVNFEEMRLDFLSVALRIENRV 119
Query: 114 YS 115
Sbjct: 120 NK 121
>gi|187918307|ref|YP_001883870.1| ribonuclease P protein component [Borrelia hermsii DAH]
gi|254808050|sp|B2S0E4|RNPA_BORHD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119861155|gb|AAX16950.1| ribonuclease P protein component [Borrelia hermsii DAH]
Length = 114
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Query: 5 CILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
+K + + + K G + ++ + R+ T + AV+RNR+RR
Sbjct: 6 ISIKSKVEIQELFKKGRFIRIEGINVFY--EFTCLAISRILVTFPRIFKGAVKRNRVRRI 63
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
KE R + D++ + + + E+ V +
Sbjct: 64 FKECFRKQFALLKDRYVDFIFVVYPQKADVNYHEVETILKNIVVYIMKR 112
>gi|89255610|ref|YP_512971.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica LVS]
gi|115314115|ref|YP_762838.1| ribonuclease P [Francisella tularensis subsp. holarctica OSU18]
gi|167010125|ref|ZP_02275056.1| ribonuclease P [Francisella tularensis subsp. holarctica FSC200]
gi|224456467|ref|ZP_03664940.1| ribonuclease P protein component [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254367005|ref|ZP_04983041.1| hypothetical protein FTHG_00179 [Francisella tularensis subsp.
holarctica 257]
gi|254368607|ref|ZP_04984623.1| hypothetical protein FTAG_01597 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370908|ref|ZP_04986913.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874230|ref|ZP_05246940.1| rnpA, ribonuclease P protein component [Francisella tularensis
subsp. tularensis MA00-2987]
gi|290953730|ref|ZP_06558351.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica URFT1]
gi|295312916|ref|ZP_06803637.1| ribonuclease P protein component [Francisella tularensis subsp.
holarctica URFT1]
gi|89143441|emb|CAJ78617.1| Ribonuclease P protein component [Francisella tularensis subsp.
holarctica LVS]
gi|115129014|gb|ABI82201.1| ribonuclease P [Francisella tularensis subsp. holarctica OSU18]
gi|134252831|gb|EBA51925.1| hypothetical protein FTHG_00179 [Francisella tularensis subsp.
holarctica 257]
gi|151569151|gb|EDN34805.1| hypothetical protein FTBG_00729 [Francisella tularensis subsp.
tularensis FSC033]
gi|157121510|gb|EDO65701.1| hypothetical protein FTAG_01597 [Francisella tularensis subsp.
holarctica FSC022]
gi|254840229|gb|EET18665.1| rnpA, ribonuclease P protein component [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158531|gb|ADA77922.1| Ribonuclease P protein component [Francisella tularensis subsp.
tularensis NE061598]
Length = 117
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N + V T K A +RN RR +
Sbjct: 12 ILDKSEIQQAFDSVENKLSTLHFTFLLAKRNIKDPGLCVILT-KKNIKKATKRNLCRRII 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 71 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 117
>gi|53724900|ref|YP_104856.1| ribonuclease P protein component [Burkholderia mallei ATCC 23344]
gi|121600212|ref|YP_994140.1| ribonuclease P protein component [Burkholderia mallei SAVP1]
gi|124386190|ref|YP_001028203.1| ribonuclease P protein component [Burkholderia mallei NCTC 10229]
gi|126441805|ref|YP_001057146.1| ribonuclease P protein component [Burkholderia pseudomallei 668]
gi|126449622|ref|YP_001083058.1| ribonuclease P protein component [Burkholderia mallei NCTC 10247]
gi|167892203|ref|ZP_02479605.1| ribonuclease P protein component [Burkholderia pseudomallei 7894]
gi|167908932|ref|ZP_02496023.1| ribonuclease P protein component [Burkholderia pseudomallei 112]
gi|167916973|ref|ZP_02504064.1| ribonuclease P protein component [Burkholderia pseudomallei
BCC215]
gi|254175104|ref|ZP_04881765.1| ribonuclease P protein component [Burkholderia mallei ATCC 10399]
gi|254201966|ref|ZP_04908330.1| ribonuclease P protein component [Burkholderia mallei FMH]
gi|254207298|ref|ZP_04913649.1| ribonuclease P protein component [Burkholderia mallei JHU]
gi|254359606|ref|ZP_04975877.1| ribonuclease P protein component [Burkholderia mallei 2002721280]
gi|60390318|sp|Q62EM2|RNPA_BURMA RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226703|sp|A3MS22|RNPA_BURM7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226704|sp|A2S8D4|RNPA_BURM9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226705|sp|A1V7D7|RNPA_BURMS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226707|sp|A3N475|RNPA_BURP6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52428323|gb|AAU48916.1| ribonuclease P protein component [Burkholderia mallei ATCC 23344]
gi|121229022|gb|ABM51540.1| ribonuclease P protein component [Burkholderia mallei SAVP1]
gi|124294210|gb|ABN03479.1| ribonuclease P protein component [Burkholderia mallei NCTC 10229]
gi|126221298|gb|ABN84804.1| ribonuclease P protein component [Burkholderia pseudomallei 668]
gi|126242492|gb|ABO05585.1| ribonuclease P protein component [Burkholderia mallei NCTC 10247]
gi|147747860|gb|EDK54936.1| ribonuclease P protein component [Burkholderia mallei FMH]
gi|147752840|gb|EDK59906.1| ribonuclease P protein component [Burkholderia mallei JHU]
gi|148028820|gb|EDK86752.1| ribonuclease P protein component [Burkholderia mallei 2002721280]
gi|160696149|gb|EDP86119.1| ribonuclease P protein component [Burkholderia mallei ATCC 10399]
Length = 136
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGRDARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILLR 88
>gi|167582768|ref|ZP_02375642.1| ribonuclease P protein component [Burkholderia thailandensis
TXDOH]
gi|167620896|ref|ZP_02389527.1| ribonuclease P protein component [Burkholderia thailandensis Bt4]
Length = 136
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGREARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILLR 88
>gi|53717716|ref|YP_106702.1| ribonuclease P protein component [Burkholderia pseudomallei
K96243]
gi|126452960|ref|YP_001064390.1| ribonuclease P protein component [Burkholderia pseudomallei
1106a]
gi|226193256|ref|ZP_03788866.1| ribonuclease P [Burkholderia pseudomallei Pakistan 9]
gi|254184150|ref|ZP_04890741.1| ribonuclease P protein component [Burkholderia pseudomallei 1655]
gi|254258784|ref|ZP_04949838.1| ribonuclease P protein component [Burkholderia pseudomallei
1710a]
gi|60390333|sp|Q63YW3|RNPA_BURPS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|166226706|sp|A3NPW9|RNPA_BURP0 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|52208130|emb|CAH34060.1| ribonuclease P protein component [Burkholderia pseudomallei
K96243]
gi|126226602|gb|ABN90142.1| ribonuclease P protein component [Burkholderia pseudomallei
1106a]
gi|184214682|gb|EDU11725.1| ribonuclease P protein component [Burkholderia pseudomallei 1655]
gi|225934856|gb|EEH30833.1| ribonuclease P [Burkholderia pseudomallei Pakistan 9]
gi|254217473|gb|EET06857.1| ribonuclease P protein component [Burkholderia pseudomallei
1710a]
Length = 136
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 8 PKAARLLKTDEFSSVFRLRPWRRTAHFVIYGKP---TGRDARLGLVIGKKYAARAVTRNL 64
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +EA R G D +L
Sbjct: 65 VKRLAREAFRTRRAEFA--GWDILLR 88
>gi|157165694|ref|YP_001466645.1| hypothetical protein CCC13826_1621 [Campylobacter concisus 13826]
gi|112800070|gb|EAT97414.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Campylobacter concisus 13826]
Length = 61
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
G AV RNR +R L+ A + + Y+++AK I F ++C + ++
Sbjct: 1 MGKAVVRNRAKRLLRAAFFSISNEL--KDGTYIMVAKNGITEISFDKICKNLSWSTKKM 57
>gi|42527900|ref|NP_972998.1| ribonuclease P protein component [Treponema denticola ATCC 35405]
gi|41818945|gb|AAS12917.1| ribonuclease P protein component [Treponema denticola ATCC 35405]
Length = 118
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 6/107 (5%)
Query: 5 CILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRR 63
L+ R V KG SL +L N R T + G AV RNR RR
Sbjct: 10 ERLRDRSCIKAVFQKGLKLSLNGVSLLILPNGLEYN--RFLCTFRRGFGSAVMRNRSRRI 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
KEA R + K G+D +L+ + + + K
Sbjct: 68 SKEAYRHIKHRL-KTGNDIILLVFSE--KDSYSLRLEQLTALFLKAK 111
>gi|119953230|ref|YP_945439.1| ribonuclease P protein component [Borrelia turicatae 91E135]
gi|254808053|sp|A1QZM7|RNPA_BORT9 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119862001|gb|AAX17769.1| ribonuclease P protein component [Borrelia turicatae 91E135]
Length = 114
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 3/113 (2%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
+K + + + K G + ++ S + R+ T K AV+RNR+
Sbjct: 3 KRNISIKSKVEIQELFKKGRFIRIEGINIFY--EFTSLSISRMIVTFPKVFKGAVKRNRV 60
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
RR KE R + D++ + + + + E+ + +
Sbjct: 61 RRIFKECFRKQLALLKNRYVDFIFVVYPQRVDVNYCEVDTMLKNIIVHVMKRK 113
>gi|237747153|ref|ZP_04577633.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS]
gi|229378504|gb|EEO28595.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS]
Length = 123
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K F+ V + + F L +N R+G V K+ AV RN ++R
Sbjct: 10 RIVKTDDFSSVFRMRPCARTEHFVLYA--RSNQLAHARLGIVVAKRFAPRAVTRNTVKRI 67
Query: 64 LKEAVRLCAEGVLKHGHDYVLI 85
+E R D ++
Sbjct: 68 CREVFRCMQM----PALDCIIR 85
>gi|292572235|gb|ADE30150.1| Ribonuclease P [Rickettsia prowazekii Rp22]
Length = 119
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K GE +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCA--EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I K+ I F L + + R
Sbjct: 63 RNKIKRRIRHLMRIIVNDSNFKAIKFAIIIIPKKGFEEINFSHLQYELSKIILR 116
>gi|118496690|ref|YP_897740.1| ribonuclease P protein component [Francisella tularensis subsp.
novicida U112]
gi|254372058|ref|ZP_04987551.1| hypothetical protein FTCG_01197 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254375204|ref|ZP_04990684.1| hypothetical protein FTDG_01395 [Francisella novicida GA99-3548]
gi|118422596|gb|ABK88986.1| ribonuclease P protein component [Francisella novicida U112]
gi|151569789|gb|EDN35443.1| hypothetical protein FTCG_01197 [Francisella novicida GA99-3549]
gi|151572922|gb|EDN38576.1| hypothetical protein FTDG_01395 [Francisella novicida GA99-3548]
Length = 117
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N V T K A +RN RR +
Sbjct: 12 ILDKSEIQQAFDSVESKLSTLHFTFLLAKRNIKEPGLCVILT-KKNIKKATKRNLCRRII 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 71 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 117
>gi|329944744|ref|ZP_08292823.1| ribonuclease P protein component-like protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328529880|gb|EGF56770.1| ribonuclease P protein component-like protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 96
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 30 EVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
VG V K+ A RNR++RR++ + G+ + G V+
Sbjct: 3 YHAGGRGDESPALVGVVVPKKQIPLATHRNRVKRRVRALMAQRVGGL-EPGARVVVRGLA 61
Query: 89 DALFIPFKELCNHFVERVRRNKRS 112
A + L + R +
Sbjct: 62 GADGADSRTLGRDLDRLLNRCRER 85
>gi|218131654|ref|ZP_03460458.1| hypothetical protein BACEGG_03275 [Bacteroides eggerthii DSM
20697]
gi|317474723|ref|ZP_07933997.1| component ribonuclease P protein [Bacteroides eggerthii
1_2_48FAA]
gi|217985957|gb|EEC52296.1| hypothetical protein BACEGG_03275 [Bacteroides eggerthii DSM
20697]
gi|316909404|gb|EFV31084.1| component ribonuclease P protein [Bacteroides eggerthii
1_2_48FAA]
Length = 139
Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRVNKHELLN 84
>gi|224537284|ref|ZP_03677823.1| hypothetical protein BACCELL_02161 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521105|gb|EEF90210.1| hypothetical protein BACCELL_02161 [Bacteroides cellulosilyticus
DSM 14838]
Length = 150
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ L K++ + G + L + +V+K+ AV+R
Sbjct: 5 LHKSERLDKKKVIDKMFSGGARSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R G+L+
Sbjct: 65 NRVKRQIREAYRKNKHGLLQ 84
>gi|329956460|ref|ZP_08297057.1| putative ribonuclease P protein component [Bacteroides clarus YIT
12056]
gi|328524357|gb|EGF51427.1| putative ribonuclease P protein component [Bacteroides clarus YIT
12056]
Length = 139
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRVNKHELLN 84
>gi|187932216|ref|YP_001892201.1| ribonuclease P protein component [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187713125|gb|ACD31422.1| ribonuclease P protein component [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 117
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Query: 7 LKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N + V T K A +RN RR +
Sbjct: 12 ILDKNEIQQAFDSVENKLSTLHFTFLLAKRNIKDPGLCVILT-KKNIKKATKRNLCRRII 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE---RVRRNK 110
KE+ RL + + ++++K+ A +EL E +++
Sbjct: 71 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITEFECFLKKLH 117
>gi|85717141|ref|ZP_01048100.1| ribonuclease P protein [Nitrobacter sp. Nb-311A]
gi|85696032|gb|EAQ33931.1| ribonuclease P protein [Nitrobacter sp. Nb-311A]
Length = 87
Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
+ R+GFTVTK+ G A ERNR+RRRL+E V+ ++ DYV+I +R AL
Sbjct: 7 RDDGGPIRIGFTVTKRNGTATERNRIRRRLRELVKRMDAVSMRPHSDYVIIGRRAALNRR 66
Query: 95 FKELCNHFVERVRRNKRS 112
F + + R R
Sbjct: 67 FAVMLDDLRSAFHRLDRR 84
>gi|37521044|ref|NP_924421.1| ribonuclease P protein component [Gloeobacter violaceus PCC 7421]
gi|35212040|dbj|BAC89416.1| ribonuclease P protein component [Gloeobacter violaceus PCC 7421]
Length = 108
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 17 KKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
++ + L VL + R+G T ++K G AV RNR RR ++E++R +
Sbjct: 3 RRAKRYTSSHLQLLVLKA--APAPTRIGITTSRKVGNAVRRNRYRRLIRESLRRVLLKLA 60
Query: 77 KHGHDYVLIAKR---DALFIPFKELCNHFVERV 106
G+ V++ + A + E+C +
Sbjct: 61 -SGYKIVIVVRPQPEGAFVPSYGEICEQVNRLL 92
>gi|152980666|ref|YP_001355386.1| ribonuclease P protein component [Janthinobacterium sp. Marseille]
gi|151280743|gb|ABR89153.1| ribonuclease P protein component [Janthinobacterium sp. Marseille]
Length = 136
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 12/123 (9%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K +F+ V + +++ F L R+G K+ AV RN ++R
Sbjct: 14 RIVKTDEFSSVFRLRPVQRTAHFVLY--TRQTDLPHARLGVVAAKRFAPRAVTRNTIKRV 71
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALF----IPFKELCNHFVERVRRNKRSYYSGKNF 119
+E R D ++ + L E + R S +
Sbjct: 72 TRELFRQT----ALPSIDCIVRLSQPVNSKKGPATTASLKAALREELTRLFASLSLHQGV 127
Query: 120 SRK 122
S++
Sbjct: 128 SQR 130
>gi|320449655|ref|YP_004201751.1| ribonuclease P protein component [Thermus scotoductus SA-01]
gi|320149824|gb|ADW21202.1| ribonuclease P protein component [Thermus scotoductus SA-01]
Length = 64
Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 47 VTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
V+KK G AV RNR++ +R + ++IA +A + EL + +
Sbjct: 2 VSKKVGKAVVRNRIK----RRLREILRRLHLPRAHLLVIASPEAREATYAELFQDLIRAL 57
Query: 107 RRN 109
+++
Sbjct: 58 KKS 60
>gi|313824522|gb|EFS62236.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
Length = 62
Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
G AV RNR++RRL+ R + + + G V+ A A P + +
Sbjct: 1 MGNAVTRNRVKRRLRHLCRPLVDEL-EDGTVVVVRALPAAATQP-DRVAKDLDGAWHQAL 58
Query: 111 RSYY 114
R
Sbjct: 59 RKLR 62
>gi|51473789|ref|YP_067546.1| ribonuclease P [Rickettsia typhi str. Wilmington]
gi|81610776|sp|Q68WC8|RNPA_RICTY RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|51460101|gb|AAU04064.1| ribonuclease P [Rickettsia typhi str. Wilmington]
Length = 118
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGQKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ V ++I ++ I F L + + R
Sbjct: 63 RNKIKRRIRHLMRIIVNDSSVKAIKFAIIIIPRKGFEEINFSHLNYELSKIILR 116
>gi|149369334|ref|ZP_01889186.1| ribonuclease P [unidentified eubacterium SCB49]
gi|149356761|gb|EDM45316.1| ribonuclease P [unidentified eubacterium SCB49]
Length = 119
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
++ LK ++ + + + + + F+V K+ AV+RNR
Sbjct: 5 LNKTDRLKSKKAITQLFEEGKSFKKYPLRVLYVPVEDAKKTKASFSVPKRLFKLAVDRNR 64
Query: 60 MRRRLKEAVRLCAEGVLKHG-----HDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
++R+L+EA R+ + ++ A+ + +L + +++ K+
Sbjct: 65 IKRQLREAYRINRPSFEQENDKKFVLMFIYFAREEVTHA---QLEKAMLTLLKQLKQ 118
>gi|15604461|ref|NP_220979.1| ribonuclease P [Rickettsia prowazekii str. Madrid E]
gi|6226020|sp|Q9ZCU8|RNPA_RICPR RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|3861155|emb|CAA15055.1| RIBONUCLEASE P (rnpA) [Rickettsia prowazekii]
Length = 121
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K GE +F L + S +G V++K AV
Sbjct: 5 ITSLKNQKEFELINKLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 64
Query: 57 RNRMRRRLKEAVRLCA--EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I K+ I F L + + R
Sbjct: 65 RNKIKRRIRHLMRIIVNDSNFKAIKFAIIIIPKKGFEEINFSHLQYELSKIILR 118
>gi|257455163|ref|ZP_05620401.1| ribonuclease P protein component [Enhydrobacter aerosaccus SK60]
gi|257447496|gb|EEV22501.1| ribonuclease P protein component [Enhydrobacter aerosaccus SK60]
Length = 145
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 22/137 (16%)
Query: 3 NICILKKRRQFALVKKGE---------------LRKGPFFSLEVL----NNNNSNLLPRV 43
L + F + G P L V ++ + R+
Sbjct: 11 KSQRLLTPKDFKAMS-GRHTKTGEDQSQHVVVFKIHQPNLLLFVKVVLADSQRQAAVNRL 69
Query: 44 GFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHF 102
G + KK A ERN ++R +E RL + D +L K+ + + + +
Sbjct: 70 GLAITKKKVKRAHERNHIKRLTREYFRLHQHQLNAQ-VDILLTIKQFSDDMQNQAIVQQL 128
Query: 103 VERVRRNKRSYYSGKNF 119
K
Sbjct: 129 AMGFNLINDKIGKLKRN 145
>gi|167763946|ref|ZP_02436073.1| hypothetical protein BACSTE_02329 [Bacteroides stercoris ATCC
43183]
gi|167698062|gb|EDS14641.1| hypothetical protein BACSTE_02329 [Bacteroides stercoris ATCC
43183]
Length = 140
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ + L K++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LHKVERLDKKKIIEKMFAGGSRSFSVFPLRVVYLPVEELEADASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRVNKHELLN 84
>gi|254237757|ref|ZP_04931080.1| ribonuclease P protein component [Pseudomonas aeruginosa C3719]
gi|126169688|gb|EAZ55199.1| ribonuclease P protein component [Pseudomonas aeruginosa C3719]
Length = 73
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 6 ILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRL 64
L RQF+ V K P + +L N PR+G + KK AV+RNR++R +
Sbjct: 11 RLLTARQFSAVFDSPTGKVPGKHVLLLARENGLDHPRLGLVIGKKNVKLAVQRNRLKRLI 70
Query: 65 KEA 67
+E+
Sbjct: 71 RES 73
>gi|296141906|ref|YP_003649149.1| ribonuclease P protein component [Tsukamurella paurometabola DSM
20162]
gi|296030040|gb|ADG80810.1| ribonuclease P protein component [Tsukamurella paurometabola DSM
20162]
Length = 142
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 31/139 (22%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN---------------------- 38
+ + R FA KG R G + + N
Sbjct: 2 LPARYRMSSSRDFATAIKGGRRVGRRSIVVHVMNPAQPAMAFETASPATASERVPGLVVS 61
Query: 39 --------LLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA 90
PRVG V+K G AV R+ + RRL+ A + + G V+ A R A
Sbjct: 62 GNRSMPVVPAPRVGLIVSKAVGNAVARHAVARRLRAAAATLVDELD-DGALVVIRALRTA 120
Query: 91 LFIPFKELCNHFVERVRRN 109
EL + +
Sbjct: 121 TDESSDELAAQLRSGLIKL 139
>gi|145597101|ref|YP_001161398.1| ribonuclease P protein component [Salinispora tropica CNB-440]
gi|189043745|sp|A4XDK4|RNPA_SALTO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|145306438|gb|ABP57020.1| ribonuclease P protein component [Salinispora tropica CNB-440]
Length = 136
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++ R GF V+K G AV RN +RRRL+ VR G+ G V+ A A
Sbjct: 54 EQTSAPARAGFVVSKAVGNAVVRNAVRRRLRHLVRERLPGL-PAGSTLVVRALPTAAHRS 112
Query: 95 FKELCNHFV 103
++ L
Sbjct: 113 YQRLGVDLD 121
>gi|329902525|ref|ZP_08273135.1| Ribonuclease P protein component [Oxalobacteraceae bacterium
IMCC9480]
gi|327548753|gb|EGF33392.1| Ribonuclease P protein component [Oxalobacteraceae bacterium
IMCC9480]
Length = 134
Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
+ + K +F+ V + + + F L N+ R+G K+ AV RN
Sbjct: 17 ARERRIVKTDEFSSVFRLRPVFRSAHFVLY--TRVNALTHARLGVVAAKRLAPRAVTRNT 74
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R +E R+ D ++
Sbjct: 75 VKRITRELFRIAE----LPPIDCIVR 96
>gi|255010301|ref|ZP_05282427.1| ribonuclease P [Bacteroides fragilis 3_1_12]
gi|313148100|ref|ZP_07810293.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136867|gb|EFR54227.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 126
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 10/120 (8%)
Query: 3 NICILKKRRQFALVKKGELRKGPFF---SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
L + + G + F + + N + K+ AV+RNR
Sbjct: 7 KAERLNSKILIEKMFAGGSKSFSIFPLRVVYMPVENQDAQASVLLSVSKKRFKRAVKRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHD------YVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
++R+L+EA RL +L+ D I D L E+ + R
Sbjct: 67 VKRQLREAYRLHKHLLLQTLTDKQQQLAIAFIYLSDELT-SSAEIEEKMKTLLARISERL 125
>gi|225012545|ref|ZP_03702981.1| ribonuclease P protein component [Flavobacteria bacterium MS024-2A]
gi|225003522|gb|EEG41496.1| ribonuclease P protein component [Flavobacteria bacterium MS024-2A]
Length = 119
Score = 42.1 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 5/109 (4%)
Query: 4 ICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRR 62
+ LK +R + L + VG +V+K AV+RNR++R
Sbjct: 10 LRRLKSKRVLDQLFDSGQIIRSRNLLLRYQLIETVPAFYVGVSVSKRNFKKAVDRNRIKR 69
Query: 63 RLKEAVRLC-AEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
+L+E +R ++ + K+ + + L + K
Sbjct: 70 QLREGLREADSQNFFYGNCMLIFTGKKASETM---VLKEEISALFNKMK 115
>gi|198274135|ref|ZP_03206667.1| hypothetical protein BACPLE_00272 [Bacteroides plebeius DSM
17135]
gi|198273213|gb|EDY97482.1| hypothetical protein BACPLE_00272 [Bacteroides plebeius DSM
17135]
Length = 131
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNN----NSNLLPRVGFTVTKKQGCAVE 56
+S + L R + G + P F L ++ N + K+ AV+
Sbjct: 9 LSKVERLNSRILIERLFTGGSKSLPAFPLRIVYMPVEGENLPAATILISVPKKRFKRAVK 68
Query: 57 RNRMRRRLKEAVRLCAEGVL 76
RNR++R+++EA R +L
Sbjct: 69 RNRVKRQVREAYRKNKHILL 88
>gi|303256372|ref|ZP_07342386.1| ribonuclease P protein component [Burkholderiales bacterium 1_1_47]
gi|331001502|ref|ZP_08325120.1| ribonuclease P protein component domain protein [Parasutterella
excrementihominis YIT 11859]
gi|302859863|gb|EFL82940.1| ribonuclease P protein component [Burkholderiales bacterium 1_1_47]
gi|329568231|gb|EGG50048.1| ribonuclease P protein component domain protein [Parasutterella
excrementihominis YIT 11859]
Length = 151
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 17/131 (12%)
Query: 2 SNICILKKRRQFALVKKGE-----LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AV 55
+KK + F V K G +F L+ + + R G TV K +V
Sbjct: 11 PQKAKIKKSQDFLTVLKARGKGVVRLSGQWFELKAVL-TQGKVSSRFGLTVGKHFSKRSV 69
Query: 56 ERNRMRRRLKEAVRL------CAEGVLKHGHDYVLIAKRD----ALFIPFKELCNHFVER 105
+RN ++R L+EA+R +VL K+ A L E
Sbjct: 70 DRNLVKRILREAIRHSVLTHPAESPSALQSRTFVLRLKKKVPVPAEGACLNSLKKELSED 129
Query: 106 VRRNKRSYYSG 116
R +
Sbjct: 130 ANRLLSQLEAR 140
>gi|150026406|ref|YP_001297232.1| ribonuclease P protein component [Flavobacterium psychrophilum
JIP02/86]
gi|149772947|emb|CAL44431.1| Ribonuclease P protein component [Flavobacterium psychrophilum
JIP02/86]
Length = 131
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 5 CILKKRRQFALVKKGELRKGPF--FSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMR 61
LK + L+ G + + ++G +V+K AV+RN +
Sbjct: 9 ERLKSKTTIDLLFSGGKSISKYPLRLVYTPICLGEEEQIKMGVSVSKKYFKKAVDRNYFK 68
Query: 62 RRLKEAVRLCAEGVL 76
R L+E RL +L
Sbjct: 69 RVLRETYRLNKHLLL 83
>gi|17544721|ref|NP_518123.1| ribonuclease P protein component [Ralstonia solanacearum GMI1000]
gi|17427010|emb|CAD13530.1| probable ribonuclease p protein component [Ralstonia solanacearum
GMI1000]
Length = 131
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 9 KRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKE 66
K +F+ V +R+ F L V N + R+G + KK AVERN ++R+ +E
Sbjct: 2 KTDEFSSVFALRPVRRSRHFVLYV--RANGHPQARLGIVIGKKFARRAVERNLIKRQCRE 59
Query: 67 AVRLCAEGVLKHGHDYVLI 85
RL + G D ++
Sbjct: 60 LFRLRQAALG--GRDVLIR 76
>gi|270295159|ref|ZP_06201360.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274406|gb|EFA20267.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 138
Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ L K++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LRKSERLDKKKVIEKMFAGGSRSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R+++EA R+ G+L
Sbjct: 65 NRVKRQIREAYRMNKHGLL 83
>gi|319900641|ref|YP_004160369.1| ribonuclease P protein component [Bacteroides helcogenes P
36-108]
gi|319415672|gb|ADV42783.1| ribonuclease P protein component [Bacteroides helcogenes P
36-108]
Length = 125
Score = 41.3 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ L K++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LHKSERLDKKKVIEKMFSGGSRSFSVFPLRVVYLPVEEMEAPASILISVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R+++EA R+ +L
Sbjct: 65 NRVKRQIREAYRMNKHELL 83
>gi|328675236|gb|AEB27911.1| Ribonuclease P protein component [Francisella cf. novicida 3523]
Length = 117
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 7 LKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ + N + V T K A +RN RR +
Sbjct: 12 ILDKSEIQQAFDSVESKLGTLHFTFLLAKRNIKDPGLCVILT-KKNIKKATKRNLCRRIV 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
KE+ RL + + ++++K+ A +EL E
Sbjct: 71 KESFRLHKDLLDHKS--LIVLSKKTAAQATKEELWQSITE 108
>gi|325281343|ref|YP_004253885.1| Ribonuclease P protein component [Odoribacter splanchnicus DSM
20712]
gi|324313152|gb|ADY33705.1| Ribonuclease P protein component [Odoribacter splanchnicus DSM
20712]
Length = 139
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLK---HGH 80
PF + ++ R+ +V+KK AV+RNR++R +EA RL + GH
Sbjct: 42 PFRVVLKDSSIPGEYPARIAISVSKKKFKRAVKRNRVKRLTREAYRLNKPEFYQHIIPGH 101
Query: 81 --DYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
D + I L + F + +++ S
Sbjct: 102 TVDILFIYLDQNLPV-FSKTEKAIKSVLKKIPSLLSS 137
>gi|332881508|ref|ZP_08449157.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332680506|gb|EGJ53454.1| ribonuclease P protein component [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 146
Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVT---KKQGCAVER 57
L +R + G + F + + P V V+ ++ AV+R
Sbjct: 11 KSERLCSKRIIDALFTGGSKSMSAFPLRVVFMPVPVEAPAPLVSILVSVSKRRFKRAVKR 70
Query: 58 NRMRRRLKEAVRLCAEGV 75
NR++R+++EA R +
Sbjct: 71 NRVKRQIREAYRKQKHIL 88
>gi|257457351|ref|ZP_05622522.1| ribonuclease P protein component [Treponema vincentii ATCC 35580]
gi|257445273|gb|EEV20345.1| ribonuclease P protein component [Treponema vincentii ATCC 35580]
Length = 123
Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 35/113 (30%), Gaps = 12/113 (10%)
Query: 1 MSNICIL----KKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVE 56
M L + R F KG L VL N R T + G AV+
Sbjct: 1 MPKEERLCGAARIRDMFK---KGHRYSCDGAKLFVLPNK--LPYNRFVCTFKRHYGSAVQ 55
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RN+ RR KE R + G D +L+ F ++
Sbjct: 56 RNKARRLSKEVYRQMKSQLA-VGADILLLVFPG--GDTFSIRARQLYCLFKKA 105
>gi|298207210|ref|YP_003715389.1| possible ribonuclease P component [Croceibacter atlanticus
HTCC2559]
gi|83849846|gb|EAP87714.1| possible ribonuclease P component [Croceibacter atlanticus
HTCC2559]
Length = 123
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 17 KKGELRKGPFFSLEVLN-NNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEG 74
G+ + + +N +VG +V K+ AV RNR++R L+E+ R
Sbjct: 22 LNGKSVTAYPLRMYYIPLKDNDVKGFKVGVSVPKRNFKLAVHRNRIKRLLRESFRKNKYL 81
Query: 75 VLK-----HGHDYVLIAKR----DALFIPFKELCNHFVER 105
V V I K + + FK+L F++
Sbjct: 82 VYNGTTQHFALLIVYIGKETPEYEFVETKFKKLVGAFLKA 121
>gi|311748431|ref|ZP_07722216.1| ribonuclease P [Algoriphagus sp. PR1]
gi|126576945|gb|EAZ81193.1| ribonuclease P [Algoriphagus sp. PR1]
Length = 130
Score = 41.3 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 15/128 (11%)
Query: 1 MSNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVER 57
+ L ++ + PF + + + P+V F+V+KK+ AV+R
Sbjct: 5 LPKKERLYAEKEIKELFSEGSSFFLFPFKVQFFVKKHGEHGTPKVLFSVSKKKIKKAVDR 64
Query: 58 NRMRRRLKEAVRLCAEGV-------LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
N ++RR+KE+ RL + L G YV + F+++ + + +
Sbjct: 65 NFVKRRMKESYRLNKSLLSGLENKELLLGLIYV-----GTKKMEFQQIQEKVILTLHKLV 119
Query: 111 RSYYSGKN 118
++ +
Sbjct: 120 KTLEAKTP 127
>gi|269792317|ref|YP_003317221.1| ribonuclease P protein component [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099952|gb|ACZ18939.1| ribonuclease P protein component [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 140
Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFS-LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRM 60
L+ +F V + R L + + + +VG TV KK A R R
Sbjct: 18 PKDVRLRSGWEFDFVFRTGRRSCGELVRLFFVTSPD--GTTKVGVTVGKKMAKAARRVRG 75
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RR +EA+R +K G + + L +++ + R
Sbjct: 76 RRCAREALRRLIP-WIKDGVWLAVSMRERGLNATARDVYADLAALLWR 122
>gi|257095989|ref|YP_003169630.1| ribonuclease P protein component [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048513|gb|ACV37701.1| ribonuclease P protein component [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 132
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 5/111 (4%)
Query: 2 SNICILKKRRQFALVKKGEL-RKGPFFSLEVLNNNNSNLL-PRVGFTVTKKQ-GCAVERN 58
L K +F+ V + F L +++ R+G V K+ +V+RN
Sbjct: 19 PKHYRLLKTDEFSSVFGFRRALRSRHFLLHYRRRDSTEAPGARLGLVVAKRFLRRSVDRN 78
Query: 59 RMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RR ++E D V+ L + ++L + + +
Sbjct: 79 LVRRLVRER--FRLLRARLRSCDLVMRLAVKPLPLDRRDLAHEIEGLLSKM 127
>gi|325954656|ref|YP_004238316.1| ribonuclease P protein component [Weeksella virosa DSM 16922]
gi|323437274|gb|ADX67738.1| Ribonuclease P protein component [Weeksella virosa DSM 16922]
Length = 121
Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRR 62
LK R+ + + V + K+ AV+RN+M+R
Sbjct: 7 KDEKLKSRKAIERLFTDSRSYSVYPLRIVYRVSEQEKNQFAVSVSKKRFKLAVDRNKMKR 66
Query: 63 RLKEAVRLCAEGVLKHGHDY-VLIAKRDALFIPFKELCNHFVERVRRN 109
R++EA RL + Y +++ F E+ +++
Sbjct: 67 RIREAYRLNKTLLDNSPLRYEMMVIYLSKDKNSFLEIEKAMQVILKKL 114
>gi|282858211|ref|ZP_06267401.1| ribonuclease P protein component [Pyramidobacter piscolens W5455]
gi|282583942|gb|EFB89320.1| ribonuclease P protein component [Pyramidobacter piscolens W5455]
Length = 94
Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKR 88
+ +L + R V KK A RNR RR LKE++R +K G + +
Sbjct: 1 MRLLFVKAPDGKTRFAMAVGKKIAKAHLRNRGRRVLKESLR-RLHPWMKEGWWFACMLNE 59
Query: 89 DALFIPFKELCNHFVERVRR 108
L E+ ++R
Sbjct: 60 QGLRAKADEVYADLGALLKR 79
>gi|261416140|ref|YP_003249823.1| hypothetical protein Fisuc_1748 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372596|gb|ACX75341.1| hypothetical protein Fisuc_1748 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327503|gb|ADL26704.1| putative ribonuclease p protein component [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 89
Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
+ R F KK G AV RN+ RR L+ + K ++++ ++ + +
Sbjct: 7 PDGFCRFCFLAKKKNGNAVYRNKCRRILRPLFYGIVPNIKKPVWAMIIVS-DNSKEMSSE 65
Query: 97 ELCNHFVERVRRNK 110
+ + +
Sbjct: 66 RFRESAQKIFHKME 79
>gi|110636524|ref|YP_676731.1| RNase P protein subunit A [Cytophaga hutchinsonii ATCC 33406]
gi|110279205|gb|ABG57391.1| ribonuclease P protein component [Cytophaga hutchinsonii ATCC
33406]
Length = 138
Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 2 SNICILKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERN 58
L + + K K PF L + + + P+V +V+K AV+RN
Sbjct: 17 PKKEKLTSKTTIDRLFKEGESRFKYPFRILFLSADTYTEYFPQVLISVSKRNFKRAVDRN 76
Query: 59 RMRRRLKEAVRLCAEGVL 76
R++R ++EA RL +L
Sbjct: 77 RIKRLIREAYRLQKNELL 94
>gi|163786936|ref|ZP_02181384.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|163789215|ref|ZP_02183657.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|159875430|gb|EDP69492.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
gi|159878796|gb|EDP72852.1| RNase P protein, subunit A [Flavobacteriales bacterium ALC-1]
Length = 125
Score = 40.5 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 14 ALVKKGELRKGPFFSLEVLNNN-NSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLC 71
L +G+ L L N + G +V+K+ AV RNR++R L+EA RL
Sbjct: 19 QLFTEGKAITAYPLRLIYLKTEFEDNSTLKTGVSVSKRLHKTAVARNRIKRLLREAYRLN 78
Query: 72 AEGVLKH---GHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+ + ++++ F +L +
Sbjct: 79 KPIYFNNSSTSYAFMILYLSK-DGTTFDKLNKSMKLLFDK 117
>gi|160891753|ref|ZP_02072756.1| hypothetical protein BACUNI_04209 [Bacteroides uniformis ATCC
8492]
gi|317478178|ref|ZP_07937347.1| ribonuclease P protein component [Bacteroides sp. 4_1_36]
gi|156859160|gb|EDO52591.1| hypothetical protein BACUNI_04209 [Bacteroides uniformis ATCC
8492]
gi|316905661|gb|EFV27446.1| ribonuclease P protein component [Bacteroides sp. 4_1_36]
Length = 138
Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF--SLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ L +++ + G R F + L + +V+K+ AV+R
Sbjct: 5 LRKSERLDRKKVIEKMFAGGSRSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R+++EA R+ G+L
Sbjct: 65 NRVKRQIREAYRMNKHGLL 83
>gi|332883433|gb|EGK03716.1| ribonuclease P protein component [Dysgonomonas mossii DSM 22836]
Length = 142
Score = 40.5 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 11/98 (11%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPRVGFTV----TKKQGCAVERNRMRRRLKEAVRLCAE 73
G + L ++ N + + KK AV+RNR++R ++EA RL
Sbjct: 31 NGNSFVAYPLRVVYLFSDEDNKENQYASVMISVAKKKFKRAVKRNRVKRLIREAYRLNKS 90
Query: 74 ------GVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
+ D + + L + E+ +
Sbjct: 91 SLSELLQIHNKRLDIAFLYLKTELP-TYAEIEKAMQKA 127
>gi|320536046|ref|ZP_08036104.1| ribonuclease P protein component [Treponema phagedenis F0421]
gi|320147096|gb|EFW38654.1| ribonuclease P protein component [Treponema phagedenis F0421]
Length = 116
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 30/97 (30%), Gaps = 6/97 (6%)
Query: 14 ALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
V K G L VL N R T + G AV+RN RR KE R
Sbjct: 19 KSVFKQGNKYYCNGAKLFVLPNKLEYN--RFLCTFPRGYGNAVQRNAARRLSKEVYRQMK 76
Query: 73 EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+ + G D +L+ F +
Sbjct: 77 KEL-NQGFDLILLLFPG--NNTFAARTGQLKVLFNKA 110
>gi|326573506|gb|EGE23472.1| ribonuclease P protein component [Moraxella catarrhalis O35E]
Length = 87
Score = 40.1 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 40 LPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKEL 98
R+G + KK AV+RNR++R +E R + D V+I K ++
Sbjct: 11 SARLGLAITKKKLKKAVDRNRLKRLCRENFRHRQASWVA--IDVVVIVKAGYPRE--FDI 66
Query: 99 CNHFVERVRRNKR 111
E + +
Sbjct: 67 ATEVTELFNKINK 79
>gi|189464684|ref|ZP_03013469.1| hypothetical protein BACINT_01028 [Bacteroides intestinalis DSM
17393]
gi|189436958|gb|EDV05943.1| hypothetical protein BACINT_01028 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKG--ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVER 57
+ L K++ + G + L + +V+K+ AV+R
Sbjct: 5 LHKTERLDKKKVIDKMFSGGARSFSVFPLRVVYLPVEELEAPVSILVSVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R G+L+
Sbjct: 65 NRVKRQIREAYRKNKHGLLQ 84
>gi|238061911|ref|ZP_04606620.1| hypothetical protein MCAG_02877 [Micromonospora sp. ATCC 39149]
gi|237883722|gb|EEP72550.1| hypothetical protein MCAG_02877 [Micromonospora sp. ATCC 39149]
Length = 138
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
N++ R GF V+K G AV RN +R R + L G V+ A A
Sbjct: 56 ENTSAPTRAGFVVSKAVGPAVVRNTVR-RRLRHLVRERLTALPEGSTLVVRALPAAAEAS 114
Query: 95 FKEL 98
+ L
Sbjct: 115 YARL 118
>gi|308125384|ref|ZP_07663382.1| ribonuclease P protein component [Vibrio parahaemolyticus K5030]
gi|308114125|gb|EFO51665.1| ribonuclease P protein component [Vibrio parahaemolyticus K5030]
Length = 51
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+E+ R + D+V+IAK+ A + +E+ F + +R R
Sbjct: 3 RESFRNSQHQL--PNKDFVVIAKKSAQDLSNEEIFKLFDKLWQRLSRPSR 50
>gi|291615451|ref|YP_003525608.1| ribonuclease P protein component [Sideroxydans lithotrophicus ES-1]
gi|291585563|gb|ADE13221.1| ribonuclease P protein component [Sideroxydans lithotrophicus ES-1]
Length = 121
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNR 59
+ L +++ F + + + R +F++ N + R+G +V+K+ A +RN+
Sbjct: 11 LPRSFRLSRQQGFTRILQVKARTNSWFAVHTKANVS--GHARLGISVSKRVLPAATQRNK 68
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
++R ++E R A L + D V+ ++ +
Sbjct: 69 VKRLIRECFRRNARCGLTN--DVVIRLRKPLVDKK 101
>gi|310765877|gb|ADP10827.1| Ribonuclease P protein component [Erwinia sp. Ejp617]
Length = 52
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSG 116
+E+ RL + D+V++AK+ + L + RR+ R
Sbjct: 3 RESFRLRQHEL--PAMDFVIVAKKGIGELDNHALTEALEKLWRRHCRLARGS 52
>gi|268318301|ref|YP_003292020.1| ribonuclease P protein component [Rhodothermus marinus DSM 4252]
gi|262335835|gb|ACY49632.1| ribonuclease P protein component [Rhodothermus marinus DSM 4252]
Length = 103
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 37 SNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL-----KHGHDYVLIAKRDAL 91
+++ +VGF+ ++ AV RNR+RR L+E RL ++ + ++I R
Sbjct: 15 ADVPVQVGFSAGRQARRAVVRNRIRRLLRETYRLHQHPLVELFRNRPDTLTLMILYRADP 74
Query: 92 FIPFKELCNHFVERVRRN 109
+ + + E +RR
Sbjct: 75 AVARECIRRDLPEALRRL 92
>gi|116514956|ref|YP_802585.1| hypothetical protein BCc_006 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116256810|gb|ABJ90492.1| protein component of ribonuclease P [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 114
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRM 60
+ + + + K F L L N N PR+ +++K + +RNR+
Sbjct: 8 KKLRFISNTKFYFTCNKKNKIYTKNFVL--LANFNFLNFPRLSISISKKNIKKSHDRNRI 65
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
+R ++E+ RL + D+ K++ K + +
Sbjct: 66 KRIIRESFRLFQNNL--KYMDFFFDCKKNVHLYDNKIIFYFLRKLW 109
>gi|15640027|ref|NP_219387.1| RNAse P, protein component [Treponema pallidum subsp. pallidum str.
Nichols]
Length = 135
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 14 ALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCA 72
V K G L VL N R T + G AV RNR RR KEA R
Sbjct: 30 RAVFKQGRRFCYGRACLFVL--PNGCAYSRFLATFRRGYGKAVARNRARRLSKEAYRALK 87
Query: 73 EGVLKHGHDYVLIA 86
++ G D VL+
Sbjct: 88 SSLV-PGFDLVLLV 100
>gi|53711356|ref|YP_097348.1| ribonuclease P [Bacteroides fragilis YCH46]
gi|60679672|ref|YP_209816.1| ribonuclease P [Bacteroides fragilis NCTC 9343]
gi|253564538|ref|ZP_04841995.1| ribonuclease P [Bacteroides sp. 3_2_5]
gi|265764801|ref|ZP_06093076.1| ribonuclease P [Bacteroides sp. 2_1_16]
gi|52214221|dbj|BAD46814.1| putative ribonuclease P protein component [Bacteroides fragilis
YCH46]
gi|60491106|emb|CAH05854.1| possible ribonuclease P component [Bacteroides fragilis NCTC 9343]
gi|251948314|gb|EES88596.1| ribonuclease P [Bacteroides sp. 3_2_5]
gi|263254185|gb|EEZ25619.1| ribonuclease P [Bacteroides sp. 2_1_16]
gi|301161137|emb|CBW20675.1| possible ribonuclease P component [Bacteroides fragilis 638R]
Length = 107
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD--- 81
P + + N + K+ AV+RNR++R+L+EA R+ +L+ D
Sbjct: 13 PLRVVYMPVENQDVQASILLSVSKKRFKRAVKRNRVKRQLREAYRMHKHQLLQILTDKQQ 72
Query: 82 ---YVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
I D L E+ + R
Sbjct: 73 QLAIAFIYLSDELT-SSAEIEEKMKILLARISEKL 106
>gi|227538311|ref|ZP_03968360.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33300]
gi|227241826|gb|EEI91841.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33300]
Length = 135
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 2 SNICILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNR 59
+ L +R + + F + + + +V +V+K+ AV RN
Sbjct: 7 TKEERLCSKRLIDSLFHSGSSFVLYPFRIVFCQAADIAVPAQVIISVSKRRYKKAVTRNL 66
Query: 60 MRRRLKEAVRLCAEGVL---KHGHDY-VLIA--KRDALFIPFKELCNHFVERVRRNKR 111
++RR++EA R + +L H +LIA + F+E+ + + K
Sbjct: 67 LKRRMREAYRTQKKEILYSFLEDHHLNLLIAIQYVGKTELSFEEMKVKLALALNKLKN 124
>gi|126662705|ref|ZP_01733704.1| RNase P protein, subunit A [Flavobacteria bacterium BAL38]
gi|126626084|gb|EAZ96773.1| RNase P protein, subunit A [Flavobacteria bacterium BAL38]
Length = 123
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPF--FSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERN 58
LK + L+ F + V N + ++G +V+K AV+RN
Sbjct: 6 PKKEKLKSKTTIDLLFSEGNSVSKFPLRLVYVENKEPNAEPIKMGVSVSKKYFKKAVDRN 65
Query: 59 RMRRRLKEAVRLCAEGV---LKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
+R L+E RL + L+ + ++ + + + E+ ++ ++
Sbjct: 66 YFKRVLRETYRLNKHILIDNLEKSYAFMFF-YQTKERLSYPEIEEKTIQLFQKFNERQK 123
>gi|300774239|ref|ZP_07084106.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33861]
gi|300758918|gb|EFK55747.1| ribonuclease P [Sphingobacterium spiritivorum ATCC 33861]
Length = 135
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVL---KHGHDY 82
F + + + +V +V+K+ AV RN ++RR++EA R + +L H
Sbjct: 33 FRIVFCQAADIAVPAQVIISVSKRRYKKAVTRNLLKRRMREAYRTQKKEILYSFLEDHHL 92
Query: 83 -VLIA--KRDALFIPFKELCNHFVERVRRNKR 111
+LIA + F E+ + + K
Sbjct: 93 NLLIAIQYVGKTELSFAEMKVKLALALNKLKN 124
>gi|313204649|ref|YP_004043306.1| ribonuclease p protein component [Paludibacter propionicigenes WB4]
gi|312443965|gb|ADQ80321.1| ribonuclease P protein component [Paludibacter propionicigenes WB4]
Length = 144
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 21 LRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG 79
P + ++ + N + +V K+ AV+RNR++R ++E+ RL + +++
Sbjct: 29 FIAYPLRVVYLIESRNDVAAASIMVSVPKKRFKRAVKRNRLKRLMRESYRLNKQELIEAL 88
Query: 80 HD---YVLIAKRDALF--IPFKELCNHFVERVRRNKRS 112
D + +A + F+ + + R K
Sbjct: 89 DDKQLQIHVAFNYVSDDVLDFEAVEKKMKIALERLKEK 126
>gi|281357427|ref|ZP_06243915.1| hypothetical protein Vvad_PD1086 [Victivallis vadensis ATCC
BAA-548]
gi|281316030|gb|EFB00056.1| hypothetical protein Vvad_PD1086 [Victivallis vadensis ATCC
BAA-548]
Length = 94
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 35 NNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ L R G +K +V+RNR RR E+ RL E + VLI +R
Sbjct: 7 PAPDDLLRCGVICGRKYSLLSVKRNRARRLCWESFRLLKEYL--PVVRLVLIPRRRMEKY 64
Query: 94 PFKELCNHFVERVRRN 109
+++ + +
Sbjct: 65 KRQDVTREMAGLLAKA 80
>gi|254495042|ref|ZP_01053733.2| ribonuclease P protein component [Polaribacter sp. MED152]
gi|213690624|gb|EAQ43161.2| ribonuclease P protein component [Polaribacter sp. MED152]
Length = 133
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 3 NICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLP-RVGFTV-TKKQGCAVERNR 59
LK ++ + K G K + L +++ P ++G +V + A +RNR
Sbjct: 8 KQERLKSKKLIEKLYKEGSSVKAFPLRMVFLQTEHTSEYPAQMGVSVAKRNFKKAPDRNR 67
Query: 60 MRRRLKEAVRLCAEGVLKHGHD--YVL-IAKRDALFIPFKELCNHFVERV 106
++R ++E+ RL + ++ + D YV I+ + E+ + +
Sbjct: 68 LKRLMRESYRL-QKEIVYNNADKPYVFMISYLGKEEKEYHEIYTKMNKLL 116
>gi|111226216|ref|YP_717010.1| ribonuclease P protein component (RNaseP protein) [Frankia alni
ACN14a]
gi|111153748|emb|CAJ65506.1| Ribonuclease P protein component (RNaseP protein) [Frankia alni
ACN14a]
Length = 111
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP 94
S PR GF V ++ G AV RNR+RRRL+E VR + + G V+ A +A
Sbjct: 3 TTSGEPPRAGFVVGRRVGKAVVRNRVRRRLREQVRARLDRL-PPGTMVVVRALPEAASAS 61
Query: 95 FKELCNHFV 103
+ L
Sbjct: 62 SERLGQALD 70
>gi|288800269|ref|ZP_06405727.1| ribonuclease P protein component [Prevotella sp. oral taxon 299
str. F0039]
gi|288332482|gb|EFC70962.1| ribonuclease P protein component [Prevotella sp. oral taxon 299
str. F0039]
Length = 145
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 14/135 (10%)
Query: 2 SNICILKKRRQFALVKKGELRKG-PFFSLEVLNN-----NNSNLLPRVGFTVTKKQGCAV 55
+ +Q + G + F + V+ + + AV
Sbjct: 10 RKSERIHSLKQIDELFGGGKSRALSAFPIRVVYRYVHRLPTEAPFQVLISVPKRNLKHAV 69
Query: 56 ERNRMRRRLKEAVRLCAEGVLKH-------GHDYVLIAKRDALFIPFKELCNHFVERVRR 108
+RNR++R+L+EA RL + G D I D+ +++ ++ V + R
Sbjct: 70 DRNRVKRQLREAYRLNKHLLFNSKQKDSDKGMDMAFIWL-DSQLYDSEKVHHNMVNLLTR 128
Query: 109 NKRSYYSGKNFSRKS 123
++ K + +
Sbjct: 129 LAEKLWNKKPKTEST 143
>gi|281421502|ref|ZP_06252501.1| ribonuclease P protein component [Prevotella copri DSM 18205]
gi|281404574|gb|EFB35254.1| ribonuclease P protein component [Prevotella copri DSM 18205]
Length = 147
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYV 83
L V + +V +V+K AV+RNR++R+++EA R + + +YV
Sbjct: 38 RMVFLLVDKKDEQAPSVQVLISVSKRYFKHAVKRNRVKRQIREAFRYQKQELETCMQNYV 97
>gi|224023481|ref|ZP_03641847.1| hypothetical protein BACCOPRO_00183 [Bacteroides coprophilus DSM
18228]
gi|224016703|gb|EEF74715.1| hypothetical protein BACCOPRO_00183 [Bacteroides coprophilus DSM
18228]
Length = 131
Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF---SLEVLNNNNSNLLPRVGFTV-TKKQGCAVE 56
+ L R + G + P F + + + + +V K+ AV+
Sbjct: 9 LPKKERLNSRLLIERLFSGGGKSLPAFPLRIVYMPIEEETRPTAAILISVPKKRFKRAVK 68
Query: 57 RNRMRRRLKEAVRLCAEGVL 76
RNR++R+++EA R + +L
Sbjct: 69 RNRVKRQIREAYRKHKDILL 88
>gi|207109186|ref|ZP_03243348.1| ribonuclease P, protein component (rnpA) [Helicobacter pylori
HPKX_438_CA4C1]
Length = 77
Score = 39.0 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 53 CAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRS 112
AV+RN ++RRL+ A L G V + + D + F L HF+E + K
Sbjct: 1 NAVKRNLIKRRLRSLTSKHAA--LCQGLALVFVPRSDCYHLDFWALEKHFLEMLTSIKNY 58
Query: 113 YYSG 116
Sbjct: 59 MNKA 62
>gi|88802011|ref|ZP_01117539.1| ribonuclease P [Polaribacter irgensii 23-P]
gi|88782669|gb|EAR13846.1| ribonuclease P [Polaribacter irgensii 23-P]
Length = 132
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 3 NICILKKRRQFALVK-KGELRKG-PFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNR 59
+ LK ++ + +G K P + + + S ++G +V K+ AV+RNR
Sbjct: 7 KLERLKSKKLIEKLYAEGSSVKSFPLRMMFIQTTHTSKFPCQIGVSVAKRNYKLAVDRNR 66
Query: 60 MRRRLKEAVRLCAEGVLKHGHD--YVL-IAKRDALFIPFKELCNHFVERV 106
++R ++E RL + ++ + + YV I+ I ++EL + +
Sbjct: 67 LKRLMRETYRL-QKEIVYNNLEEPYVFMISYIGREEIKYEELYLKMEKLL 115
>gi|300313622|ref|YP_003777714.1| ribonuclease P protein [Herbaspirillum seropedicae SmR1]
gi|300076407|gb|ADJ65806.1| ribonuclease P protein [Herbaspirillum seropedicae SmR1]
Length = 137
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 6 ILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRR 63
+ K +F+ V + + + F L NS R+G K+ AV RN ++R
Sbjct: 21 RIVKTDEFSSVFRLRPVHRTEHFVLYA--RRNSLTQARLGVVAAKRLAPRAVTRNTIKRA 78
Query: 64 LKEAVRLCAEGVLKHGHDYVLI 85
+E R D ++
Sbjct: 79 TRELFRQAE----LPAVDCIVR 96
>gi|284038781|ref|YP_003388711.1| hypothetical protein Slin_3922 [Spirosoma linguale DSM 74]
gi|283818074|gb|ADB39912.1| hypothetical protein Slin_3922 [Spirosoma linguale DSM 74]
Length = 126
Score = 38.6 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 19/124 (15%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLE---VLNNNNSNLLP--------RVGFTVTKK 50
+ L ++ + K F L VL P V +
Sbjct: 6 TKSERLCSKKILGELFKKGSASVRTFYLFPFRVLYIPQPEPGPDSEPLLPAIVITVPKRI 65
Query: 51 QGCAVERNRMRRRLKEAVRLCAEGVLKHGH-----DYVLIAKRDALFIPFKELCNHFVER 105
AV+RN+++RR++EA RL + G ++ AK+ F+E+
Sbjct: 66 FKRAVDRNQIKRRVREAYRLNKALFSQTGTPPATIAFLYTAKQII---SFEEIEKGMKLA 122
Query: 106 VRRN 109
+++
Sbjct: 123 LKKM 126
>gi|332519440|ref|ZP_08395907.1| ribonuclease P protein component [Lacinutrix algicola 5H-3-7-4]
gi|332045288|gb|EGI81481.1| ribonuclease P protein component [Lacinutrix algicola 5H-3-7-4]
Length = 123
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRM 60
LK +++ + KG+ L L N +N +VG +V+K+ AV+R R+
Sbjct: 7 KTEKLKSKKEIEALFLKGKSVSAWPLRLVYLKNEKTN---KVGVSVSKRNFKLAVDRIRI 63
Query: 61 RRRLKEAVRLCAEGV 75
+R L+EA RL +
Sbjct: 64 KRLLREAYRLNKTFL 78
>gi|330818733|ref|YP_004362438.1| Ribonuclease P protein component [Burkholderia gladioli BSR3]
gi|327371126|gb|AEA62482.1| Ribonuclease P protein component [Burkholderia gladioli BSR3]
Length = 155
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 2 SNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNR 59
L K +F+ V + R+ F + + R+G + KK AV RN
Sbjct: 27 PKAARLLKTDEFSSVFRLRPWRRSAHFVIYGKP---TGGDARLGLVIGKKYAPRAVTRNL 83
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLI 85
++R ++A R G D +L
Sbjct: 84 VKRLARDAFRRRRAEFA--GWDLLLR 107
>gi|86144135|ref|ZP_01062472.1| putative ribonuclease P protein component [Leeuwenhoekiella
blandensis MED217]
gi|85829397|gb|EAQ47862.1| putative ribonuclease P protein component [Leeuwenhoekiella
blandensis MED217]
Length = 131
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGC-AVER 57
LK+++ + + + + L + + + G +V K+ AV R
Sbjct: 6 PKKEHLKRKKILDKLFAEKNKISAYPLLLFYVETSLPEEEVQIQAGVSVAKRNHKLAVIR 65
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIP-FKELCNHFVERVRRNKRSYYSG 116
NR++R ++E R + Y + +P EL V+ + + S
Sbjct: 66 NRIKRLMREVYRKNKTQFQTNDKTYAFMFIYTGREVPVIDELEKAMVKLITKFNTKVTSE 125
Query: 117 KNFS 120
+
Sbjct: 126 NQNT 129
>gi|56750081|ref|YP_170782.1| ribonuclease P [Synechococcus elongatus PCC 6301]
gi|81300424|ref|YP_400632.1| ribonuclease P [Synechococcus elongatus PCC 7942]
gi|67461295|sp|Q5N605|RNPA_SYNP6 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123556734|sp|Q31MS4|RNPA_SYNE7 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|56685040|dbj|BAD78262.1| ribonuclease P protein component [Synechococcus elongatus PCC 6301]
gi|81169305|gb|ABB57645.1| ribonuclease P protein component [Synechococcus elongatus PCC 7942]
Length = 122
Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 4/114 (3%)
Query: 1 MSNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNN--SNLLPRVGFTVTKKQGCAVER 57
+ L++R +F + +G P L L S R ++ K R
Sbjct: 3 LPRCHRLRQRDRFPALYRGGRKLSTPSLLLRWLPQAEIESVNESRFAIVISLKVHKRAVR 62
Query: 58 NRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDA-LFIPFKELCNHFVERVRRNK 110
RR +A L L+ G D +L K L + + + R +
Sbjct: 63 RNRLRRRLQAALLRLRDRLRPGFDGLLTVKPGLDLDTSTSQFLQELEDLLTRAE 116
>gi|149277972|ref|ZP_01884111.1| RNase P protein, subunit A [Pedobacter sp. BAL39]
gi|149231170|gb|EDM36550.1| RNase P protein, subunit A [Pedobacter sp. BAL39]
Length = 145
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 30 EVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHG---------H 80
V++ +S V K+ A +RN ++RR +EA RL G+L
Sbjct: 50 MVVDVPHSFPAQVVINVSKKRFKKATDRNLIKRRSREAYRLLKGGLLYPHLSSLPGLMIF 109
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKN 118
I K+ F + +++ + S +N
Sbjct: 110 SLQFIGKKKY---EFDFMEKKMALALKKLQESLVKDEN 144
>gi|317061938|ref|ZP_07926423.1| ribonuclease P protein component [Fusobacterium sp. D12]
gi|313687614|gb|EFS24449.1| ribonuclease P protein component [Fusobacterium sp. D12]
Length = 77
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 35 NNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALF 92
N+N + GF +KK G AV RNR++R +E V VL ++ +AK+ +
Sbjct: 6 KNNNFYNKYGFVASKKIGNAVCRNRIKRLFREFVNKNE-TVLPKSTTFIFVAKKKSGE 62
>gi|329962751|ref|ZP_08300674.1| ribonuclease P protein component [Bacteroides fluxus YIT 12057]
gi|328529585|gb|EGF56488.1| ribonuclease P protein component [Bacteroides fluxus YIT 12057]
Length = 125
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFF---SLEVLNNNNSNLLPRVGFTVTKKQGCAVER 57
+ L +++ + G R F + + + ++ AV+R
Sbjct: 5 LRKPERLNRKKVIEKMFAGGSRSFSVFPLRVVYLSVEELEAPASILVSVSKRRFKRAVKR 64
Query: 58 NRMRRRLKEAVRLCAEGVLK 77
NR++R+++EA R+ +L+
Sbjct: 65 NRVKRQIREAYRMNKHELLR 84
>gi|312886267|ref|ZP_07745881.1| ribonuclease P protein [Mucilaginibacter paludis DSM 18603]
gi|311301292|gb|EFQ78347.1| ribonuclease P protein [Mucilaginibacter paludis DSM 18603]
Length = 128
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 8/97 (8%)
Query: 18 KGELRKGPFFSLEVLNNNNSNLLPR--VGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG- 74
KG F + +P V ++ AV+RN ++RR++E RL +
Sbjct: 22 KGSSFLCYPFKVSWCAAPEHQPVPVQVVLAVSKRRYKRAVDRNLIKRRMREVYRLYKQQC 81
Query: 75 ----VLKHGHDYVL-IAKRDALFIPFKELCNHFVERV 106
+L VL I + + + +
Sbjct: 82 LYNPLLAANKTIVLSIGFIGKEIADYSLMEKKMQKAL 118
>gi|313675777|ref|YP_004053773.1| ribonuclease p protein component [Marivirga tractuosa DSM 4126]
gi|312942475|gb|ADR21665.1| ribonuclease P protein component [Marivirga tractuosa DSM 4126]
Length = 133
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 9/118 (7%)
Query: 2 SNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPR--VGFTVTKKQGCAVER 57
L R + + PF + + +S + P+ + +K A +R
Sbjct: 13 KKTERLHHRNDIQELFEKGSSFYLYPFKVIYIAEPLDSVIKPQQLLISVPKRKFKKAPDR 72
Query: 58 NRMRRRLKEAVRLCA----EGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
N ++R+++EA R L I D +P L + + R +
Sbjct: 73 NFIKRQVREAYRHNKYLIDPEKLSKSLRIAYIYTSD-KKMPSDALTKKLKKTLERLHQ 129
>gi|88807551|ref|ZP_01123063.1| ribonuclease P protein component of ribozyme [Synechococcus sp. WH
7805]
gi|88788765|gb|EAR19920.1| ribonuclease P protein component of ribozyme [Synechococcus sp. WH
7805]
Length = 131
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEVLNNNN--------------SNLLPRVGFTVT-K 49
L+ R F + ++G+ G L ++N R+ ++ K
Sbjct: 8 RLRGHRCFDHLHRRGKRFHGTLMVLRKASSNPKLLRRDTVGVSELGQPKSCRIAVVISGK 67
Query: 50 KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV RNR+RR L + +R E +HG ++LI+ R L +
Sbjct: 68 VHKRAVVRNRLRRLLHDHLRTRFEARPEHGQCWLLISLRPGADAGEANLLEECDRLLE 125
>gi|255324010|ref|ZP_05365135.1| ribonuclease P protein component [Corynebacterium
tuberculostearicum SK141]
gi|255298867|gb|EET78159.1| ribonuclease P protein component [Corynebacterium
tuberculostearicum SK141]
Length = 43
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 76 LKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
L D V+ A + ++L + +R+
Sbjct: 7 LPASVDVVIRALPASATASSEQLEKDLAKALRK 39
>gi|294660186|ref|NP_852790.2| ribonuclease P subunit [Mycoplasma gallisepticum str. R(low)]
gi|284811836|gb|AAP56358.2| ribonuclease P protein component [Mycoplasma gallisepticum str.
R(low)]
gi|284930250|gb|ADC30189.1| ribonuclease P protein component [Mycoplasma gallisepticum str.
R(high)]
Length = 116
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M LKK F LVK + + N + ++G +V+KK AV RN
Sbjct: 1 MKRENSLKKITNFLELVKSKNKYYSNNYVIYAEKNRENK--IKIGISVSKKLFAKAVIRN 58
Query: 59 RMRRRLKEAV 68
+++R ++
Sbjct: 59 KIKREVRSFF 68
>gi|294505867|ref|YP_003569925.1| hypothetical protein SRM_00052 [Salinibacter ruber M8]
gi|294342195|emb|CBH22973.1| Conserved hypothetical protein [Salinibacter ruber M8]
Length = 148
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 5 CILKKRRQFALVKKGEL-----RKGPFFSLEVLNNNNS----NLLPRVGFTVTKKQGCAV 55
LK+RR + L + + ++ +VGF + V
Sbjct: 21 YRLKRRRLIRSLFDRTRDDVRTVAEGCVRLLYRVVDRAVLGHDVPLQVGFAPGPRAESGV 80
Query: 56 ERNRMRRRLKEAVRLCAEGVLK-----HGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
ERNR+RR L+E R+ ++ V+I R A + +RR
Sbjct: 81 ERNRIRRLLREVYRVHQYTLVDPFVCGPEALIVMILFRGAPEQADDGIGRDLPPALRRA 139
>gi|34540057|ref|NP_904536.1| ribonuclease P [Porphyromonas gingivalis W83]
gi|48474794|sp|Q7MXI4|RNPA_PORGI RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|34396368|gb|AAQ65435.1| ribonuclease P protein component [Porphyromonas gingivalis W83]
Length = 137
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVER 57
+S L R + V P + L + + + +V K+ AV+R
Sbjct: 9 LSKSERLYLRDEINTVFGEGKAFVVYPLRVVYRLGSEHRVAYSSMLVSVAKKRFRRAVKR 68
Query: 58 NRMRRRLKEAVRLCAEGV 75
NR++R ++EA RL +
Sbjct: 69 NRVKRLVREAYRLNKHLL 86
>gi|67458739|ref|YP_246363.1| ribonuclease P [Rickettsia felis URRWXCal2]
gi|75536804|sp|Q4UML0|RNPA_RICFE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|67004272|gb|AAY61198.1| Ribonuclease P [Rickettsia felis URRWXCal2]
Length = 118
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGKKFHERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ + ++I ++ I F L + + R
Sbjct: 63 RNKIKRRIRHLIRIIVSDSKLKAIKFAMIIIPRKGFEEINFSHLNCELSKIILR 116
>gi|188994173|ref|YP_001928425.1| ribonuclease P [Porphyromonas gingivalis ATCC 33277]
gi|254808074|sp|B2RHI3|RNPA_PORG3 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|188593853|dbj|BAG32828.1| probable ribonuclease P protein component [Porphyromonas
gingivalis ATCC 33277]
Length = 137
Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 1 MSNICILKKRRQFALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVER 57
+S L R + V P + L + + + +V K+ AV+R
Sbjct: 9 LSKSERLYLRDEINTVFGEGKAFVVYPLRVVYRLGSEHRAAYSSMLVSVAKKRFRRAVKR 68
Query: 58 NRMRRRLKEAVRLCAEGV 75
NR++R ++EA RL +
Sbjct: 69 NRVKRLVREAYRLNKHLL 86
>gi|193213719|ref|YP_001999672.1| ribonuclease P [Chlorobaculum parvum NCIB 8327]
gi|193087196|gb|ACF12472.1| ribonuclease P protein component [Chlorobaculum parvum NCIB 8327]
Length = 143
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNL----LPRVGFTVTKK-QGCA 54
+ IL+ + + + G KG + + + RV FTV KK A
Sbjct: 10 LPRREILRGKSTISPLFNEGNRLKGGPLLMFYTCSRQGDRTGCTPVRVLFTVGKKLVPRA 69
Query: 55 VERNRMRRRLKEAVRLCAEGV 75
V+RNR++R ++EA RL + +
Sbjct: 70 VDRNRIKRLMREAYRLEKKAL 90
>gi|288926855|ref|ZP_06420762.1| ribonuclease P protein component [Prevotella buccae D17]
gi|288336380|gb|EFC74759.1| ribonuclease P protein component [Prevotella buccae D17]
Length = 160
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG----PFFSLEVLNNNNSNLLPRVGFTV--TKKQGCA 54
++ + ++ + G + P + + + + + + A
Sbjct: 9 LAKAERICSKKLTDRLFNGSSGRSLSAFPLRMVYTVVSREEDAPAALMLVSVPKRHFKRA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLK 77
V+RNR++R+++EA R + +L
Sbjct: 69 VKRNRVKRQVREAFRKNKQLLLP 91
>gi|83816626|ref|YP_444207.1| hypothetical protein SRU_0054 [Salinibacter ruber DSM 13855]
gi|83758020|gb|ABC46133.1| hypothetical protein SRU_0054 [Salinibacter ruber DSM 13855]
Length = 146
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 14/126 (11%)
Query: 5 CILKKRRQFALVKKGEL-----RKGPFFSLEVLNNNNS----NLLPRVGFTVTKKQGCAV 55
LK+RR + L + + ++ +VGF + V
Sbjct: 19 YRLKRRRLIRSLFDRTRDDVRTVAKGCVRLLYRVVDRAVLGHDVPLQVGFAPGPRAESGV 78
Query: 56 ERNRMRRRLKEAVRLCAEGVLK-----HGHDYVLIAKRDALFIPFKELCNHFVERVRRNK 110
ERNR+RR L+E R+ ++ V+I R A + +RR
Sbjct: 79 ERNRIRRLLREVYRVHQYTLVDPFVCGPEALIVMILFRGAPEQADDGIGRDLPPALRRAA 138
Query: 111 RSYYSG 116
S
Sbjct: 139 ASLDER 144
>gi|255693350|ref|ZP_05417025.1| ribonuclease P protein component [Bacteroides finegoldii DSM 17565]
gi|260620927|gb|EEX43798.1| ribonuclease P protein component [Bacteroides finegoldii DSM 17565]
Length = 129
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV------LKHGHD 81
+ + + ++ AV+RNR++R+++EA R + +
Sbjct: 37 VVYMPVEQGEASASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSILQECLQGREQHLA 96
Query: 82 YVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
I D L EL + R S
Sbjct: 97 IAFIYLSDELTAT-AELEEKMKIALSRISEKLSS 129
>gi|315607061|ref|ZP_07882065.1| ribonuclease P protein component [Prevotella buccae ATCC 33574]
gi|315251115|gb|EFU31100.1| ribonuclease P protein component [Prevotella buccae ATCC 33574]
Length = 164
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 1 MSNICILKKRRQFALVKKGELRKG----PFFSLEVLNNNNSNLLPRVGFTV--TKKQGCA 54
++ + ++ + G + P + + + + + + A
Sbjct: 9 LAKAERICSKKLTDRLFNGSSGRSLSAFPLRMVYTVVSREEDAPAALMLVSVPKRHFKRA 68
Query: 55 VERNRMRRRLKEAVRLCAEGVLK 77
V+RNR++R+++EA R + +L
Sbjct: 69 VKRNRVKRQVREAFRKNKQLLLP 91
>gi|189460192|ref|ZP_03008977.1| hypothetical protein BACCOP_00829 [Bacteroides coprocola DSM
17136]
gi|189433053|gb|EDV02038.1| hypothetical protein BACCOP_00829 [Bacteroides coprocola DSM
17136]
Length = 131
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFF---SLEVLNNNNSNLLPRVGFTV-TKKQGCAVER 57
L + G + P F + + V +V K+ AV+R
Sbjct: 10 PKTERLSSVILIEKLFAGGSKSLPAFPLRIVYMPVEGEELPAVSVLISVPKKRFKRAVKR 69
Query: 58 NRMRRRLKEAVRLCAEGVLKH 78
NR++R+++EA R ++
Sbjct: 70 NRVKRQIREAYRKHKYLLIDP 90
>gi|305665834|ref|YP_003862121.1| ribonuclease P [Maribacter sp. HTCC2170]
gi|88710605|gb|EAR02837.1| ribonuclease P [Maribacter sp. HTCC2170]
Length = 123
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNS-NLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLC 71
L ++G+ L L N + G V K AV+RNR++R L+E+ RL
Sbjct: 17 QLFQEGKSLSSFPIKLIYLKIEEPMNARFKAGMAVPKKNFKSAVKRNRIKRLLRESYRLN 76
Query: 72 AEGVLKH---GHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
V + ++++ + EL + + + +
Sbjct: 77 KHLVFNNSEGNFAFLILYL-GKEMPKYIELEKNMQLTLHKFLKKIE 121
>gi|157828791|ref|YP_001495033.1| ribonuclease P [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933519|ref|YP_001650308.1| ribonuclease P [Rickettsia rickettsii str. Iowa]
gi|229470485|sp|B0BUJ2|RNPA_RICRO RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|229470486|sp|A8GT00|RNPA_RICRS RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|157801272|gb|ABV76525.1| ribonuclease P [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908606|gb|ABY72902.1| ribonuclease P protein component [Rickettsia rickettsii str. Iowa]
Length = 118
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGKKLHERYFILVIATKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEGVLKHG--HDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I ++ I F L + + R
Sbjct: 63 RNKIKRRIRHLIRIIVSDSSFKDIKFAMIIIPRKGFEEINFSHLNYELSKLILR 116
>gi|330752669|emb|CBL88134.1| ribonuclease P protein component [uncultured Cytophagia bacterium]
Length = 138
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAE--GVLKHGHDYVLIA 86
+ +L+ + + K AV RN+++R ++E R + G+ +I
Sbjct: 55 IILLSQQFNQGRKVLISVPKKNHRTAVSRNKIKRIIREVYRKNKGIINISDQGYLMAIIY 114
Query: 87 KRDALFIPFKELCNHFVERVRRN 109
++ F EL + +R
Sbjct: 115 LGSSIP-NFNELEVQLINLFQRL 136
>gi|319765067|ref|YP_004129004.1| hypothetical protein Alide_4421 [Alicycliphilus denitrificans BC]
gi|330827259|ref|YP_004390562.1| ribonuclease P protein [Alicycliphilus denitrificans K601]
gi|317119628|gb|ADV02117.1| hypothetical protein Alide_4421 [Alicycliphilus denitrificans BC]
gi|329312631|gb|AEB87046.1| ribonuclease P protein [Alicycliphilus denitrificans K601]
Length = 146
Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 25/131 (19%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVL--------------------NNNNSNLLPR 42
+ LK R QF V G + F+L L
Sbjct: 1 MHRLKTRAQFQAVMAGGTVSRTAHFALHRLGLTAAGAASAGPDQESQALFAVPQGQPGVW 60
Query: 43 VGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA---KRDALFIPFKEL 98
+G V K+ AV RN ++R++ + + H L A ++ + L
Sbjct: 61 LGAMVPKRWARRAVTRNAIKRQIHAVAAGFESRMPRAAHVVRLRAAFDRKHFVSATSDAL 120
Query: 99 CNHFVERVRRN 109
+++
Sbjct: 121 KAAVRAELQQL 131
>gi|229495320|ref|ZP_04389055.1| ribonuclease P protein component [Porphyromonas endodontalis ATCC
35406]
gi|229317763|gb|EEN83661.1| ribonuclease P protein component [Porphyromonas endodontalis ATCC
35406]
Length = 129
Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 1 MSNICILKKRRQFALVK---KGELRKGPFFSLEVLNNNNSNLLPRVGF---TVTKKQGCA 54
M+ L R + G P + + + P + K+ A
Sbjct: 1 MTKPERLYLRDDIRCLFEKSSGSFIAYPLRVVYRIAPKSEGKEPALSVLISVAKKRFKHA 60
Query: 55 VERNRMRRRLKEAVRLCAEGVLK 77
V+RNR++R ++EA R+ +
Sbjct: 61 VDRNRVKRLIREAYRVQKSPLYN 83
>gi|239948222|ref|ZP_04699975.1| ribonuclease P protein component [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922498|gb|EER22522.1| ribonuclease P protein component [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 118
Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + +G V+KK AV
Sbjct: 3 ITSLKNQKEFELINKFGKKFHKRYFILVIAKKLSKIFLEPKYNVFLGIKVSKKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
RN+++RR++ +R+ ++I ++ I F L + +
Sbjct: 63 RNKIKRRIRHLIRIIVSDSSFKAIKFAMIIIPRKGFEEINFSHLNYELSKII 114
>gi|326335903|ref|ZP_08202080.1| RNase P protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691867|gb|EGD33829.1| RNase P protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 125
Score = 37.0 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 14 ALVKKGELRKGPF-FSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLC 71
L+ + + L L N N +V +V +K AV RNR++R ++E+ R
Sbjct: 23 QLLFREGSIIKKYPLKLLYLPTINENFSTQVLISVPKRKFKRAVHRNRIKRLIRESYRNQ 82
Query: 72 AEGVL 76
+L
Sbjct: 83 KHLLL 87
>gi|256819558|ref|YP_003140837.1| ribonuclease P protein component [Capnocytophaga ochracea DSM 7271]
gi|256581141|gb|ACU92276.1| ribonuclease P protein component [Capnocytophaga ochracea DSM 7271]
Length = 126
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 25 PFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL----KHGH 80
P L ++ + + AV RN ++RRL+E+ RL + K+
Sbjct: 34 PLRLLYAPVSSLEASYQLLISVPKRTFKRAVHRNLLKRRLRESYRLQKHLLPVKTEKYAL 93
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVR 107
++ I K A + + + +
Sbjct: 94 AFLYIGKELA---DYATIYKSVTQLIE 117
>gi|148240235|ref|YP_001225622.1| ribonuclease P protein component [Synechococcus sp. WH 7803]
gi|254808095|sp|A5GN10|RNPA_SYNPW RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|147848774|emb|CAK24325.1| Ribonuclease P protein component [Synechococcus sp. WH 7803]
Length = 131
Score = 37.0 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFS--------------LEVLNNNNSNLLPRVGFTVT-K 49
L+ R F + ++G+ G + + L R+ ++ K
Sbjct: 8 RLRGHRCFDHLHRRGKRYYGTWMVLRKAPSNAKLLRRDIHGLLTQTQPHSCRIAVVISGK 67
Query: 50 KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV RNR+RR L + +RL E H ++LI+ R L +
Sbjct: 68 VHKRAVVRNRLRRLLHDHLRLRFEARSTHSDVWLLISLRPGADADEANLLEECDRLLE 125
>gi|315225066|ref|ZP_07866883.1| ribonuclease P protein component [Capnocytophaga ochracea F0287]
gi|314944749|gb|EFS96781.1| ribonuclease P protein component [Capnocytophaga ochracea F0287]
Length = 126
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 2 SNICILKKRRQFALVKKGELRKGPF-FSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L KR + + L ++ ++ +V + AV RN
Sbjct: 9 PKTEKLCKREAIQQLFAQAEALTCYPLRLLYAPVSSLEAPYQLLISVPKRTFKRAVHRNL 68
Query: 60 MRRRLKEAVRLCAEGVL----KHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
++RRL+E+ RL + K+ ++ I K + + + +
Sbjct: 69 LKRRLRESYRLQKHLLPVKTEKYALAFLYIGKELT---DYATIYKSVTQLIE 117
>gi|254490343|ref|ZP_05103532.1| hypothetical protein MDMS009_675 [Methylophaga thiooxidans DMS010]
gi|224464476|gb|EEF80736.1| hypothetical protein MDMS009_675 [Methylophaga thiooxydans DMS010]
Length = 56
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERV 106
M+R ++E+ R D V++++ ++
Sbjct: 1 MKRIIRESFRQNQSAFF--NIDIVVLSRPGVDQRDNTQIWAALERHW 45
>gi|312862351|ref|ZP_07722594.1| ribonuclease P protein component [Streptococcus vestibularis F0396]
gi|311101994|gb|EFQ60194.1| ribonuclease P protein component [Streptococcus vestibularis F0396]
Length = 44
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 19/30 (63%)
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNK 110
D+V+IA++ + ++++ ++ V ++ K
Sbjct: 11 DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 40
>gi|295131894|ref|YP_003582570.1| ribonuclease P protein component [Zunongwangia profunda SM-A87]
gi|294979909|gb|ADF50374.1| ribonuclease P protein component [Zunongwangia profunda SM-A87]
Length = 135
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 37 SNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVL-----KHGHDYVLIAKRDA 90
N + GF+V KK AV+RNR++R ++E+ R V+ ++ ++ +++ D
Sbjct: 50 KNPYFKTGFSVPKKFIKTAVQRNRIKRLMRESFRKNKYIVMTGAKQQYALMFIYLSREDI 109
Query: 91 LFIPFKELCNHFVERVRRNKRSYY 114
I ++L V + R K+
Sbjct: 110 SQIKMEQL---MVNLLERLKQKEK 130
>gi|317970541|ref|ZP_07971931.1| ribonuclease P protein component of ribozyme [Synechococcus sp.
CB0205]
Length = 113
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 13/109 (11%)
Query: 13 FALVK-KGELRKGPFFSLEVL----------NNNNSNLLPRVGFTVT-KKQGCAVERNRM 60
F + KG G + L + +++ L R+G V+ K +VERNR+
Sbjct: 2 FDRIYQKGRRIHGQWMVLRTMAAKPELLKTDPRDHTPLSCRLGVVVSSKVSKRSVERNRL 61
Query: 61 RRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RR L + G ++ K + + L E V +
Sbjct: 62 RRLLHGHLSQLIANQG-EGIWLLISLKPGSADTEEQLLLGECSELVAKA 109
>gi|330997186|ref|ZP_08321039.1| ribonuclease P protein component [Paraprevotella xylaniphila YIT
11841]
gi|329570981|gb|EGG52688.1| ribonuclease P protein component [Paraprevotella xylaniphila YIT
11841]
Length = 146
Score = 37.0 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVL-----NNNNSNLLPRVGFTVTKKQGCAVER 57
L +R + G + F L V+ + + + ++ AV+R
Sbjct: 11 KSERLCSKRVIDALFAGGSKSMSAFPLRVVFMPVPVEAPAPPVSVLVSVSKRRFKRAVKR 70
Query: 58 NRMRRRLKEAVRLCAEGV 75
NR++R+++EA R +
Sbjct: 71 NRVKRQIREAYRKQKHIL 88
>gi|295394848|ref|ZP_06805061.1| ribonuclease P protein component [Brevibacterium mcbrellneri ATCC
49030]
gi|294972181|gb|EFG48043.1| ribonuclease P protein component [Brevibacterium mcbrellneri ATCC
49030]
Length = 59
Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 56 ERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
RNR++RRL+ + G YV+ A + F L F + R
Sbjct: 2 TRNRVKRRLRAIAHERL-THMPPGI-YVVRALPQSARSEFIYLERDFDVALSRV 53
>gi|238650655|ref|YP_002916507.1| ribonuclease P [Rickettsia peacockii str. Rustic]
gi|259494115|sp|C4K1K8|RNPA_RICPU RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|238624753|gb|ACR47459.1| ribonuclease P [Rickettsia peacockii str. Rustic]
Length = 118
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKKQGC-AVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGKKLHERYFILVIATKLPKIFLESKYNTFLGIKVSRKLSKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I ++ I F L + + R
Sbjct: 63 RNKIKRRIRHLIRIIVSDSSFKAIKFAMIIIPRKGFEEINFSHLNYELSKVILR 116
>gi|228478132|ref|ZP_04062743.1| ribonuclease P protein component [Streptococcus salivarius SK126]
gi|228250312|gb|EEK09565.1| ribonuclease P protein component [Streptococcus salivarius SK126]
Length = 44
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 19/30 (63%)
Query: 81 DYVLIAKRDALFIPFKELCNHFVERVRRNK 110
D+V+IA++ + ++++ ++ V ++ K
Sbjct: 11 DFVVIARKGVEDLSYQDIYSNLVHVLKIAK 40
>gi|282880555|ref|ZP_06289262.1| ribonuclease P protein component [Prevotella timonensis CRIS
5C-B1]
gi|281305658|gb|EFA97711.1| ribonuclease P protein component [Prevotella timonensis CRIS
5C-B1]
Length = 136
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 NICILKKRRQFALVKKG---ELRKGPFFSLEVL--NNNNSNLLPRVGFTVTKKQGC-AVE 56
+ R+ + G + + L N ++ ++ +V+K+ AV+
Sbjct: 11 KEERICSRKLIEKLFNGSDSQSLASFPLRVVYLLTENEAQDVPVKMMVSVSKRHFKQAVK 70
Query: 57 RNRMRRRLKEAVRLCAEGVLKH 78
RNR++R+++EA RL + + +
Sbjct: 71 RNRVKRQVREAYRLQKQLITEP 92
>gi|167626980|ref|YP_001677480.1| ribonuclease P protein component [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667553|ref|ZP_04755131.1| ribonuclease P protein component [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876098|ref|ZP_05248808.1| ribonuclease P protein component [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596981|gb|ABZ86979.1| ribonuclease P protein component [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842119|gb|EET20533.1| ribonuclease P protein component [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 117
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 7 LKKRRQFALVKKGE--LRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRL 64
+ + + F+ +L++ K A +RN RR +
Sbjct: 12 ILDKSEIKQAFDNVDTKLGTLHFT-FLLSHRTHKEPGMCAILPKKSIKKATKRNLCRRII 70
Query: 65 KEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
KE+ RL + + ++++K+ A +EL
Sbjct: 71 KESFRLHKDLLEHKS--LIVLSKKTASQATKEELWQSIKN 108
>gi|581220|emb|CAA25983.1| unnamed protein product [Escherichia coli]
Length = 72
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 2 SNICILKKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L QF V + + P ++ L NS PR+G TV K A ERNR
Sbjct: 7 PRELRLLTPSQFTFVFQQPQRAGTPQITI--LGRLNSLGHPRIGLTVAKKNVRRAHERNR 64
Query: 60 MRRRLKEA 67
++R + A
Sbjct: 65 IKRLTRXA 72
>gi|323343532|ref|ZP_08083759.1| ribonuclease P protein component [Prevotella oralis ATCC 33269]
gi|323095351|gb|EFZ37925.1| ribonuclease P protein component [Prevotella oralis ATCC 33269]
Length = 132
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 1 MSNICILKKRRQFALVKKGELRKG----PFFSLEVLNNNNSNLLPRVGFTVT---KKQGC 53
+S + R + G P + L ++ +V V+ K
Sbjct: 9 LSKEERICSRTLIESLFNGGGSHALSAYPLRVVYKLEEQHAEQRAKVQIMVSVSKKHFKH 68
Query: 54 AVERNRMRRRLKEAVRLCAE 73
AV+RNR++R+++EA R
Sbjct: 69 AVKRNRVKRQVREAYRKNKS 88
>gi|15892860|ref|NP_360574.1| ribonuclease P [Rickettsia conorii str. Malish 7]
gi|229586954|ref|YP_002845455.1| ribonuclease P [Rickettsia africae ESF-5]
gi|21263950|sp|Q92H35|RNPA_RICCN RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|259494114|sp|C3PP52|RNPA_RICAE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|15620047|gb|AAL03475.1| ribonuclease P [Rickettsia conorii str. Malish 7]
gi|228022004|gb|ACP53712.1| Ribonuclease P [Rickettsia africae ESF-5]
Length = 118
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F L + S +G V++K AV
Sbjct: 3 ITSLKNQKEFELINKLGKKLHERYFILVIATKLPKIFLESKYNTFLGIKVSRKLNKKAVV 62
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I ++ I F L + + R
Sbjct: 63 RNKIKRRIRHLIRIIVSDSSFKAIKFAMIIIPRKGFEEINFSHLNYELSKVILR 116
>gi|120613422|ref|YP_973100.1| hypothetical protein Aave_4795 [Acidovorax citrulli AAC00-1]
gi|120591886|gb|ABM35326.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 39/153 (25%), Gaps = 41/153 (26%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNN--------------------------- 35
+ LK R QF G + F+L L +
Sbjct: 1 MHRLKTRPQFQAAMAGGTISRTAHFALHRLRLDAGSATLSDSHPGPGALPQRQAPQALFA 60
Query: 36 --NSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
++ + AV RN ++R++ A + H V+ +
Sbjct: 61 VHDAAGPWLGAMVPKRWARRAVTRNTIKRQIYAVAPEFAPQLGHAAH--VVRLRAGFDRK 118
Query: 94 PFK---------ELCNHFVERVRRNKRSYYSGK 117
F + ++ + R GK
Sbjct: 119 QFPSATSDALRRAVREELLQLFGQAVRPQRGGK 151
>gi|227541373|ref|ZP_03971422.1| hypothetical protein HMPREF0293_0692 [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182924|gb|EEI63896.1| hypothetical protein HMPREF0293_0692 [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 46
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSY 113
A + DYVL A +EL +HF +R+
Sbjct: 4 IARETARPQCDYVLRALPGIDEATAEELSHHFSAALRKAHGKL 46
>gi|284931018|gb|ADC30956.1| ribonuclease P protein component [Mycoplasma gallisepticum str.
F]
Length = 115
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 1 MSNICILKKRRQFA-LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKK-QGCAVERN 58
M LKK F LVK + + N + ++G +V KK AV RN
Sbjct: 1 MKRENSLKKITNFLELVKSKNKYYSNNYVIYAEKNRENK--IKIGISVPKKLFAKAVIRN 58
Query: 59 RMRRRLKEAV 68
+++R ++
Sbjct: 59 KIKREVRSFF 68
>gi|167587878|ref|ZP_02380266.1| ribonuclease P protein component [Burkholderia ubonensis Bu]
Length = 111
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGH 80
R+ F + + R+G V KK AV RN ++R ++A RL G+
Sbjct: 5 RRSAHFVIYGKP---TGQPARLGLVVGKKYAPRAVTRNLVKRLARDAFRLRRAEFA--GY 59
Query: 81 DYVLI 85
D +L
Sbjct: 60 DLLLR 64
>gi|325268530|ref|ZP_08135160.1| ribonuclease P protein component [Prevotella multiformis DSM
16608]
gi|324989058|gb|EGC21011.1| ribonuclease P protein component [Prevotella multiformis DSM
16608]
Length = 141
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK 77
+ AV+RNR++R+++EA R V++
Sbjct: 68 VPKRHFRRAVKRNRVKRQIREAYRKHKHSVIR 99
>gi|21672845|ref|NP_660910.1| ribonuclease P [Chlorobium tepidum TLS]
gi|26006870|sp|Q8KGG4|RNPA_CHLTE RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|21645893|gb|AAM71252.1| ribonuclease P protein component, putative [Chlorobium tepidum
TLS]
Length = 154
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 14 ALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-----TKKQGCAVERNRMRRRLKEAV 68
L +G KG F L + PR+ V K AV+RNR++R ++EA
Sbjct: 28 RLFSQGGRLKGGFLLLIYSASRPVEQAPRIPVRVLFTVGKKLVPRAVDRNRIKRLMREAY 87
Query: 69 RLCAEGVLK 77
RL + +
Sbjct: 88 RLEKNILTR 96
>gi|167747236|ref|ZP_02419363.1| hypothetical protein ANACAC_01950 [Anaerostipes caccae DSM 14662]
gi|167653214|gb|EDR97343.1| hypothetical protein ANACAC_01950 [Anaerostipes caccae DSM 14662]
Length = 330
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 9/105 (8%)
Query: 8 KKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
KR + K K + S V N++SN + RN K
Sbjct: 146 TKREEMERAAKALGYMKSTYGSFYVYGNHDSNQYRE-----KPEYTSGYLRNT---LEKA 197
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
VR+ + V K G D +I ++DA K L + ++ R
Sbjct: 198 GVRVLEDEVFKTGKDICIIGRKDAGDRDRKSLKEIMKDAPEKSFR 242
>gi|239818259|ref|YP_002947169.1| hypothetical protein Vapar_5301 [Variovorax paradoxus S110]
gi|239804836|gb|ACS21903.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 139
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 13/119 (10%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPRV---------GFTVTKKQGC 53
+ LK R QF V G + F+L + S+ + +
Sbjct: 1 MQRLKTRAQFQAVLAGATVARTAHFALHRCALDLSSSAQPLFASDDVWLGAMVPKRWARR 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA---KRDALFIPFKELCNHFVERVRRN 109
AV RN ++R++ G+ + H L A +++ + +L +++
Sbjct: 61 AVTRNAIKRQIYTVSAAPDTGLPRAAHVVRLRAGFDRKEFVSASSDKLKAAVRAELQQL 119
>gi|225620458|ref|YP_002721715.1| ribonuclease P protein component [Brachyspira hyodysenteriae WA1]
gi|225215277|gb|ACN84011.1| ribonuclease P protein component [Brachyspira hyodysenteriae WA1]
Length = 59
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDY-VLIAKRDALFI-PFKELCNHFVERVRRN 109
RNR +R ++E R + + G+DY +++ + D+ + F + ++ ++
Sbjct: 3 RNRAKRIVREIYRT-QKDKIPTGYDYFIIVNRFDSYKLPSFDDYKRDLLKLFQKV 56
>gi|297616890|ref|YP_003702049.1| ribonuclease, Rne/Rng family [Syntrophothermus lipocalidus DSM
12680]
gi|297144727|gb|ADI01484.1| ribonuclease, Rne/Rng family [Syntrophothermus lipocalidus DSM
12680]
Length = 474
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 22/107 (20%)
Query: 15 LVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEG 74
V + G L + G +V+++ C R ++R L+EA
Sbjct: 107 RVTQDISIPGRHLVLL---------PNQEGVSVSRRITCDSRRRDLKRLLEEA------- 150
Query: 75 VLKHGHDYVLIAKRDALFIPFKELCNHFVERV---RRNKRSYYSGKN 118
G +IA+ ++ P +E+ E + R KRSY S +
Sbjct: 151 -KPQGVG--VIARTNSAEAPNEEILAELRELLDLWERIKRSYESTRG 194
>gi|194337888|ref|YP_002019682.1| ribonuclease P [Pelodictyon phaeoclathratiforme BU-1]
gi|194310365|gb|ACF45065.1| ribonuclease P [Pelodictyon phaeoclathratiforme BU-1]
Length = 136
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEV----LNNNNSNLLPRVGFTVTKKQGCAV 55
+ IL+K+ +L+ K G+ KG F + L+N P + F V+KK +
Sbjct: 7 LRKQEILRKKLPISLLFKNGKSVKGDFLRIVYASLQLDNACFQPFPSILFAVSKKTVHSA 66
Query: 56 E-RNRMRRRLKEAVRLCAEGV 75
RN+++R ++EA R +
Sbjct: 67 VGRNKIKRMMREAYRHEKSVL 87
>gi|333029510|ref|ZP_08457571.1| Ribonuclease P protein component [Bacteroides coprosuis DSM
18011]
gi|332740107|gb|EGJ70589.1| Ribonuclease P protein component [Bacteroides coprosuis DSM
18011]
Length = 129
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 2 SNICILKKRRQFALVKKGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQGCAVER 57
+K ++ + G + + + V+ + + K+ AV+R
Sbjct: 7 KRQERIKSKKIIDYLFCGGAKSFSIYPIRVVYKEHPMPEATNTSILVSVSKKRHKHAVDR 66
Query: 58 NRMRRRLKEAVRLCAEGVL 76
NR++R L+E+ R +L
Sbjct: 67 NRVKRLLRESFRTNKNIIL 85
>gi|319411689|emb|CBQ73733.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 250
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Query: 45 FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHD-----------YVLIAKRDALFI 93
T + AV R+R+R RL A+R + D +L+A A
Sbjct: 135 VTKKRIHKRAVIRHRVRTRLLTALRTAIFNLQDAKLDVQGKLDLRRNVLMLVAHPSAYAK 194
Query: 94 PFKELCNHFVERVRRN 109
+ L + VRR
Sbjct: 195 DMEALVREMEKAVRRV 210
>gi|157964752|ref|YP_001499576.1| ribonuclease P [Rickettsia massiliae MTU5]
gi|157844528|gb|ABV85029.1| Ribonuclease P [Rickettsia massiliae MTU5]
Length = 120
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 4 ICILKKRRQFALVKK-GELRKGPFFSLEVLNNN-----NSNLLPRVGFTVTKK-QGCAVE 56
I LK +++F L+ K G+ +F + + S +G V++K AV
Sbjct: 5 ITSLKNQKEFELINKLGKKLHDRYFIVVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVV 64
Query: 57 RNRMRRRLKEAVRLCAEG--VLKHGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
RN+++RR++ +R+ ++I ++ I F L + + R
Sbjct: 65 RNKIKRRIRHLIRIIVSDSSFKAIKFAMIIIPRKGFEEIHFSHLNYELSKVILR 118
>gi|29348636|ref|NP_812139.1| ribonuclease P [Bacteroides thetaiotaomicron VPI-5482]
gi|29340541|gb|AAO78333.1| putative ribonuclease P protein component [Bacteroides
thetaiotaomicron VPI-5482]
Length = 109
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK------HGHD 81
+ + + ++ AV+RNR++R+++E R + +L
Sbjct: 17 VVYMPVEQGEVPATILISVSKRRFKRAVKRNRVKRQIREVYRKNKQPLLDGLQNKGQRLA 76
Query: 82 YVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
I D L EL + R
Sbjct: 77 IAFIYLSDELVAT-AELEEKMKTALSRISEKLS 108
>gi|298373590|ref|ZP_06983579.1| ribonuclease P protein component [Bacteroidetes oral taxon 274
str. F0058]
gi|298274642|gb|EFI16194.1| ribonuclease P protein component [Bacteroidetes oral taxon 274
str. F0058]
Length = 131
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMR 61
L + A + ++ + + RV F+V + AV+RNR +
Sbjct: 13 KTERLTGKNNIANLYAKGRKRLETPLMATYVKTANKGEVRVLFSVPKRYFRKAVDRNRYK 72
Query: 62 RRLKEAVRLCAEGVLKHGHD 81
R L+E+ RL E V D
Sbjct: 73 RLLRESYRLNKETVTTAITD 92
>gi|326319559|ref|YP_004237231.1| ribonuclease P protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376395|gb|ADX48664.1| ribonuclease P protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 172
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 44/153 (28%), Gaps = 41/153 (26%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNN--------------------------- 35
+ LK R QF G + F+L L +
Sbjct: 1 MHRLKTRPQFQAAMAGGTISRTAHFALHRLRLDAGPATLSDSHPGPGAPPQRQAPQALFA 60
Query: 36 -NSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
+ + P +G V K+ AV RN ++R++ A + H V+ +
Sbjct: 61 VDDSAGPWLGAMVPKRWARRAVTRNTIKRQIYAVAPDFAPQLGHAAH--VVRLRAGFDRK 118
Query: 94 PFK---------ELCNHFVERVRRNKRSYYSGK 117
F + ++ + R GK
Sbjct: 119 QFPSATSDALRRAVREELLQLFGQAVRPQRGGK 151
>gi|78224746|ref|YP_386493.1| hypothetical protein Gmet_3563 [Geobacter metallireducens GS-15]
gi|78196001|gb|ABB33768.1| hypothetical protein Gmet_3563 [Geobacter metallireducens GS-15]
Length = 51
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 64 LKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYS 115
++E RL L D +IA+R A + ++ +C V R S
Sbjct: 1 MREYYRLHKA--LFPPLDINIIARRGADKLDYQGVCKELDRVVERLAGLTRS 50
>gi|253569021|ref|ZP_04846431.1| ribonuclease P [Bacteroides sp. 1_1_6]
gi|251841040|gb|EES69121.1| ribonuclease P [Bacteroides sp. 1_1_6]
Length = 129
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 15/126 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLE-----VLNNNNSNLLPRVGFTVTKK-QGCA 54
+ L + + +G FS+ + + + +V+K+ A
Sbjct: 6 LRKAERLNSKILIGKMFEGG--HSKSFSIFPIRVVYMPVEQGEVPATILISVSKRRFKRA 63
Query: 55 VERNRMRRRLKEAVRLCAEGVLK------HGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V+RNR++R+++E R + +L I D L EL + R
Sbjct: 64 VKRNRVKRQIREVYRKNKQPLLDGLQNKGQRLAIAFIYLSDELVAT-AELEEKMKTALSR 122
Query: 109 NKRSYY 114
Sbjct: 123 ISEKLS 128
>gi|307171293|gb|EFN63218.1| hypothetical protein EAG_15203 [Camponotus floridanus]
Length = 1122
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 28/110 (25%), Gaps = 12/110 (10%)
Query: 13 FALVKKGEL--RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRL 70
F V E + N N +VG+ V+++ RN ++ L+
Sbjct: 380 FRHVIDAERDDLNNSGELTQ--PNLMPNPKSKVGYDVSRRHATTSNRNFVK--LRYPFST 435
Query: 71 CAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFS 120
+ +L + R + + +
Sbjct: 436 LNRDASNVAL------RSKIKNNDNVQLRESMKTHLTRTAAKRPALNDRA 479
>gi|258648282|ref|ZP_05735751.1| ribonuclease P protein component [Prevotella tannerae ATCC 51259]
gi|260852201|gb|EEX72070.1| ribonuclease P protein component [Prevotella tannerae ATCC 51259]
Length = 130
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLK-----HGHDY 82
+ S +V +V K++ AV+RNR +R L+EA R + + G
Sbjct: 37 VYRRIKPGSKPAIKVLLSVPKRKLRRAVDRNRAKRLLREAYRHHKDLLPAILAPDEGLHI 96
Query: 83 VLIAKRDALFIPFKELCNHFVERVRRNKRS 112
+ D +P ++ V+ +RR
Sbjct: 97 AFLWLSD-RTLPTAKVEAQLVKLLRRIVEK 125
>gi|237835891|ref|XP_002367243.1| hypothetical protein TGME49_048990 [Toxoplasma gondii ME49]
gi|211964907|gb|EEB00103.1| hypothetical protein TGME49_048990 [Toxoplasma gondii ME49]
gi|221506081|gb|EEE31716.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 694
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 13 FALVKKGELRKGPFFSLEVLNNNNSNLLPRVGF--------TVTKKQGCAVERNRMRRRL 64
F +G+ G ++ SN G + ++ + +R R+R RL
Sbjct: 330 FGSFFQGKRYSGRVLVEYLIARFTSNAFLNCGIRDVLEEPQSGARQVTKSRKRYRLRPRL 389
Query: 65 K--EAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYYSGKNFSR 121
+ + +D+V++A L + L H + + +R+ R
Sbjct: 390 EGDSCTAEAQRRLESILYDFVVVAAP--LELSGVRLYRHREDSWKEGERTRSEASALER 446
>gi|260593356|ref|ZP_05858814.1| ribonuclease P protein component [Prevotella veroralis F0319]
gi|260534632|gb|EEX17249.1| ribonuclease P protein component [Prevotella veroralis F0319]
Length = 144
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK 77
L++ ++ + + K AV+RNR++R+++EA R + +
Sbjct: 54 LQMGKASSRADVQILVSVPKKHFKRAVKRNRVKRQVREAYRKHKQLLFP 102
>gi|123966589|ref|YP_001011670.1| ribonuclease P protein component [Prochlorococcus marinus str. MIT
9515]
gi|254808080|sp|A2BXQ2|RNPA_PROM5 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123200955|gb|ABM72563.1| Bacterial ribonuclease P protein component [Prochlorococcus marinus
str. MIT 9515]
Length = 129
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 13/122 (10%)
Query: 1 MSNICILKKRRQFALVKKG-----------ELRKGPFFSLEVLNNNNSNLLPRVGFTVTK 49
+ LK R F + K ++ + L N NS ++ ++K
Sbjct: 3 LPKAMRLKGHRTFDYIHKNSEKYYGKLMTFKIARSNPKILISHKNFNSLNNFKIAIAISK 62
Query: 50 KQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFK-ELCNHFVERVR 107
K AV RN++RR L++ H ++L+ + + ++ +L F +
Sbjct: 63 KVSKKAVVRNKIRRLLQDYFLKNFRKDKNHKPYWLLVNLKSSDSCNYESKLLQEFQHLIF 122
Query: 108 RN 109
++
Sbjct: 123 KS 124
>gi|113954492|ref|YP_731299.1| ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(protein C5) [Synechococcus sp. CC9311]
gi|113881843|gb|ABI46801.1| Ribonuclease P protein component (RNaseP protein) (RNaseP protein)
(Protein C5) [Synechococcus sp. CC9311]
Length = 123
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 6 ILKKRRQFALV-KKGELRKGPFFSLEV--------------LNNNNSNLLPRVGFTVT-K 49
L+ R F + ++G+ G +L L + R ++ K
Sbjct: 2 RLRGHRCFDHLHRRGQRFHGSLMTLRKASAMPRLLRWECRPLEGEGKTSVCRCAVVISSK 61
Query: 50 KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
AV RNR+RR L + +R E +H + ++LI+ + + ++
Sbjct: 62 VSKRAVIRNRLRRLLHDHLREHFERSFQHSNTWILISLKPGAEAKDAPVLEECDRLLQ 119
>gi|298387005|ref|ZP_06996559.1| ribonuclease P protein component [Bacteroides sp. 1_1_14]
gi|298260155|gb|EFI03025.1| ribonuclease P protein component [Bacteroides sp. 1_1_14]
Length = 129
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 15/126 (11%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLE-----VLNNNNSNLLPRVGFTVTKK-QGCA 54
+ L + + +G FS+ + + + +V+K+ A
Sbjct: 6 LRKAERLNSKILIGKMFEGG--HSKSFSIFPIRVVYMPIEQGEVPATILISVSKRRFKRA 63
Query: 55 VERNRMRRRLKEAVRLCAEGVLK------HGHDYVLIAKRDALFIPFKELCNHFVERVRR 108
V+RNR++R+++E R + +L I D L EL + R
Sbjct: 64 VKRNRVKRQIREVYRKNKQPLLDGLQNKGQRLAIAFIYLSDELVAT-AELEEKMKTALSR 122
Query: 109 NKRSYY 114
Sbjct: 123 ISEKLS 128
>gi|293368632|ref|ZP_06615239.1| ribonuclease P protein component [Bacteroides ovatus SD CMC 3f]
gi|292636274|gb|EFF54759.1| ribonuclease P protein component [Bacteroides ovatus SD CMC 3f]
Length = 129
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTVTKK-QGCAVERNRMRRRLKEAVRLCAEGV 75
+ + + +V+K+ AV+RNR++R+++EA R +
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSLL 84
>gi|300692997|ref|YP_003753992.1| ribonuclease P protein component [Ralstonia solanacearum PSI07]
gi|299080057|emb|CBJ52732.1| Ribonuclease P protein component [Ralstonia solanacearum PSI07]
Length = 111
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 32 LNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLI 85
N + R+G V KK AVERN ++R+ +E RL + G D ++
Sbjct: 3 YVRANGHPQARLGIVVGKKFARRAVERNLIKRQCRELFRLRQAALG--GRDVLIR 55
>gi|251772741|gb|EES53303.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
Length = 89
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 10 RRQFALVKK--GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEA 67
R + + + G F L N+++ R+ V KK G AV RNR+RRRL+EA
Sbjct: 8 RGEIQRIIESPGIKVVSSSFVLLCQNSSDY----RLSVLVGKKIGKAVFRNRVRRRLREA 63
Query: 68 VRLCAEGVLKHGHDYVLIAKRDALFIPFK 96
R G+ YV++ + AL F
Sbjct: 64 YR--LTDGFPPGY-YVIMGRNPALTTSFD 89
>gi|213964122|ref|ZP_03392362.1| ribonuclease P protein component [Capnocytophaga sputigena Capno]
gi|213953259|gb|EEB64601.1| ribonuclease P protein component [Capnocytophaga sputigena Capno]
Length = 125
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 9/111 (8%)
Query: 2 SNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTV-TKKQGCAVERNR 59
L KR + KGE L + ++ +V + AV+RN
Sbjct: 10 PKAEKLCKRDYIQQLFAKGEAITSYPIRLLYTPIATLEVPYQLLISVPKRTFKRAVDRNL 69
Query: 60 MRRRLKEAVRLCAEGVL----KHGHDYVLIAKRDALFIPFKELCNHFVERV 106
++RRL+EA RL + ++ ++ I K + E+ N +
Sbjct: 70 LKRRLREAYRLQKNLLPVKEQQYALAFIYIGK---GKATYTEIENAVKTTL 117
>gi|28572958|ref|NP_789738.1| ribonuclease P protein component [Tropheryma whipplei TW08/27]
gi|28411091|emb|CAD67476.1| ribonuclease P protein component [Tropheryma whipplei TW08/27]
Length = 112
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 7 LKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLK 65
L ++ F+ V + G ++ VL + VGF + KK GCAV RNR+RRR++
Sbjct: 5 LSGKKNFSRVFRQGRKINCEVMTVYVLFSEEKK--LFVGFVIPKKIGCAVVRNRIRRRIR 62
Query: 66 EAVRLCAEGVL--KHGHDYVLIAKRDALFIPFKELCNHFVERVRRN 109
G + + I F+ELC F + +R
Sbjct: 63 SLAVELFRRQPERLMGASLIFRVFPKSRPIGFRELCKDFEKVKKRM 108
>gi|260436322|ref|ZP_05790292.1| ribonuclease P protein component [Synechococcus sp. WH 8109]
gi|260414196|gb|EEX07492.1| ribonuclease P protein component [Synechococcus sp. WH 8109]
Length = 99
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 34 NNNSNLLPRVGFTVT-KKQGCAVERNRMRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDAL 91
R ++ K +V+RNR+RR L + +R E G ++ + +A
Sbjct: 18 RGIQEKTCRCALVISNKVSKRSVKRNRLRRLLHDHLRQRFEERNDLAGLWLLISLRPEAA 77
Query: 92 FIPFKELCNHFVERVR 107
+L +R
Sbjct: 78 EAEPTQLLEECDSLLR 93
>gi|159903812|ref|YP_001551156.1| ribonuclease P protein component [Prochlorococcus marinus str. MIT
9211]
gi|254808079|sp|A9BBJ0|RNPA_PROM4 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|159888988|gb|ABX09202.1| Bacterial ribonuclease P protein component [Prochlorococcus marinus
str. MIT 9211]
Length = 130
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 14/124 (11%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSN-----------LLPRVGFTVT 48
+ +K + F + K G L+V N+ R +++
Sbjct: 3 LPKSMRIKGYKSFDYLHKTGLRYNSSSMLLKVAKANSRLIKSKLSDSKFINSTRCAISIS 62
Query: 49 -KKQGCAVERNRMRRRLKEAVRLCAEGVL-KHGHDYVLIAKRDALFIPFKELCNHFVERV 106
K AV RN++RR L + ++ + + + +L KEL +
Sbjct: 63 NKVSKRAVVRNQLRRMLHDYLKAKLANIPTNQNLWLLFSLRPSSLNKDPKELLKEMDTLI 122
Query: 107 RRNK 110
+ +
Sbjct: 123 SKAR 126
>gi|289810513|ref|ZP_06541142.1| ribonuclease P [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 57
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 29 LEVLNNNNSNLLPRVGFTV-TKKQGCAVERNRMRRRLKEAVRLC 71
+ +L NS PR+G TV K A ERNR++R +E+ RL
Sbjct: 12 ITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLA 55
>gi|150003757|ref|YP_001298501.1| ribonuclease P [Bacteroides vulgatus ATCC 8482]
gi|254881014|ref|ZP_05253724.1| ribonuclease P [Bacteroides sp. 4_3_47FAA]
gi|294777424|ref|ZP_06742875.1| putative ribonuclease P protein component [Bacteroides vulgatus
PC510]
gi|319640021|ref|ZP_07994748.1| ribonuclease P protein component [Bacteroides sp. 3_1_40A]
gi|149932181|gb|ABR38879.1| putative ribonuclease P protein component [Bacteroides vulgatus
ATCC 8482]
gi|254833807|gb|EET14116.1| ribonuclease P [Bacteroides sp. 4_3_47FAA]
gi|294448492|gb|EFG17041.1| putative ribonuclease P protein component [Bacteroides vulgatus
PC510]
gi|317388299|gb|EFV69151.1| ribonuclease P protein component [Bacteroides sp. 3_1_40A]
Length = 130
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 3 NICILKKRRQFALVKKGELRKGPFFSLEVLN------NNNSNLLPRVGFTVTKKQGCAVE 56
L + + G + P F L V+ + + K+ AV+
Sbjct: 8 KKERLNSKTLIERLFSGGSKSFPAFPLRVVYMSVEPVEEDMAAASILISVPKKRFKRAVK 67
Query: 57 RNRMRRRLKEAVRLCAEGVL 76
RN ++R+++EA R +L
Sbjct: 68 RNLVKRQVREAYRKNKHLLL 87
>gi|332828475|gb|EGK01180.1| ribonuclease P [Dysgonomonas gadei ATCC BAA-286]
Length = 139
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLNNNNSNLLPRVGFTV----TKKQGCAV 55
++ L + + GE + L + + ++ + KK AV
Sbjct: 12 LAKEERLCSTKSIDKLFSSGESFVAYPLRIVYLIEDETESEKQIASILVSVSKKKFKRAV 71
Query: 56 ERNRMRRRLKEAVRLCA---EGVLKHG---HDYVLIAKRDALFIPFKELCNHFVERVRRN 109
+RNR++R +KEA RL + +L+ G D + ++ L + + E+ ++ +
Sbjct: 72 KRNRVKRLVKEAFRLNKGVYQDLLRSGDKRIDIAFLYLKNELPV-YAEIEKAILKTITVL 130
Query: 110 KRSYYSGKN 118
GK
Sbjct: 131 SERLKGGKQ 139
>gi|119358506|ref|YP_913150.1| ribonuclease P [Chlorobium phaeobacteroides DSM 266]
gi|254808058|sp|A1BJZ9|RNPA_CHLPD RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|119355855|gb|ABL66726.1| ribonuclease P protein component [Chlorobium phaeobacteroides DSM
266]
Length = 146
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNN----NNSNLLPRVGFTVTKKQ-GCA 54
+ IL+K + A + G+ KG + L + + +V F V+KK A
Sbjct: 14 LRKHEILRKEQLIAALFVSGKSCKGEYLKLFYQKTVSDVKSRSPAVQVLFAVSKKNVPHA 73
Query: 55 VERNRMRRRLKEAVRLCAEGVL 76
V RNR++R ++EA R + +
Sbjct: 74 VSRNRLKRLMREAYRNEKQQLF 95
>gi|297570493|ref|YP_003691837.1| ribonuclease P protein component [Desulfurivibrio alkaliphilus
AHT2]
gi|296926408|gb|ADH87218.1| ribonuclease P protein component [Desulfurivibrio alkaliphilus
AHT2]
Length = 125
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNR 59
+ +++K ++ + +G +G F+L +++ + PR+G +V+ + AV RNR
Sbjct: 6 LPKSALIRKPGEYRRIYAQGRRVRGDSFALVYREADHA-VGPRLGISVSGVKS-AVRRNR 63
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVE 104
++R ++E RL + + V +R +
Sbjct: 64 IKRIIRELFRLNRTELS-PSLELVFTVRRGFRPDSPAAVAAALRR 107
>gi|182413292|ref|YP_001818358.1| ribonuclease P protein component [Opitutus terrae PB90-1]
gi|177840506|gb|ACB74758.1| ribonuclease P protein component [Opitutus terrae PB90-1]
Length = 143
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 28/136 (20%)
Query: 7 LKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP------------------------ 41
L+++ F +++ +G F+L L S
Sbjct: 9 LRRQSDFRVIREQGRRVNCGSFTLWGLRRAASPSPAPAEPAEPAAGAPAAEPAPSAKTSA 68
Query: 42 -RVGFTVTK-KQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELC 99
RVG + G AV RNR +RRL+E R E V G D +L A+ A+ P EL
Sbjct: 69 RRVGVVASTVAVGHAVRRNRAKRRLREIFRRHQEEV-PVGCDVLLSARAAAVDAPMPELE 127
Query: 100 NHFVERVRRNKRSYYS 115
+ FV+ R+ +
Sbjct: 128 HKFVDACRKVFSPKNA 143
>gi|212550542|ref|YP_002308859.1| ribonuclease P [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548780|dbj|BAG83448.1| ribonuclease P protein component [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 131
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 39/119 (32%), Gaps = 16/119 (13%)
Query: 3 NICILKKRRQFALVK-KGELRKGPFFSLEVLNNNNSNLLP--RVGFTVTKKQGCAVERNR 59
L +++ + +G + L +P + K+ + +RNR
Sbjct: 12 KTERLSLQKEVNYLFEQGLSFNIYPLRIVYLEKQTKGKIPVSILISVSKKRLRHSFKRNR 71
Query: 60 MRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI---------PFKELCNHFVERVRRN 109
++R ++E+ RL + +Y+ I + + ++ + +
Sbjct: 72 IKRLIRESYRLTKNRL----WEYLFIKNKGLSLAFIYTGDELHSYAQIKTVMDKILDTL 126
>gi|193216429|ref|YP_001997628.1| ribonuclease P protein component [Chloroherpeton thalassium ATCC
35110]
gi|193089906|gb|ACF15181.1| ribonuclease P protein component [Chloroherpeton thalassium ATCC
35110]
Length = 155
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 1 MSNICILKKRRQFALVK-KGELRKGPFFSLEVL---NNNNSNLLPRVGFTVTKKQGC-AV 55
+ L ++Q V G + F ++ + + + LP+V F V+K+ A
Sbjct: 18 LRKYERLCLKKQIERVYTNGATVRVSFLKVKFISLEDAPHEKGLPKVLFAVSKRMVRTAA 77
Query: 56 ERNRMRRRLKEAVRLCAE----------GVLKHGHDYVLIAKRDALFIP-FKELCNHFVE 104
+RN+++R ++EA R + + + + + +P ++++ + +
Sbjct: 78 DRNKLKRLMREAYRTQKDVFGENEICQGSLHRSALAIAFMFQASGDKLPCYQKMQSVMRK 137
Query: 105 RVRRNKRSYYSGKN 118
+R+ + +
Sbjct: 138 CLRKVCTAIEKTNS 151
>gi|319796645|ref|YP_004158285.1| hypothetical protein Varpa_6022 [Variovorax paradoxus EPS]
gi|315599108|gb|ADU40174.1| hypothetical protein Varpa_6022 [Variovorax paradoxus EPS]
Length = 139
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 12/102 (11%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNNN---------SNLLPRVGFTVTKKQGC 53
+ LK R QF V G + F+L + S+ + +
Sbjct: 1 MQRLKTRAQFQAVLAGATVARTAHFALHRCALDLASSAAPLFASDDVWLGAMVPKRWARR 60
Query: 54 AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
AV RN ++R++ A V +V+ + F
Sbjct: 61 AVTRNAIKRQIYTV--SAAPDVALPRAAHVVRLRAGFDRKEF 100
>gi|167834932|ref|ZP_02461815.1| ribonuclease P protein component [Burkholderia thailandensis
MSMB43]
Length = 112
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 22 RKGPFFSLEVLNNNNSNLLPRVGFTVTKKQG-CAVERNRMRRRLKEAVRLCAEGVLKHGH 80
R+ F + + R+G + KK AV RN ++R +EA R G
Sbjct: 5 RRSAHFVIYGKPTGHE---ARLGLVIGKKYAARAVTRNLVKRLAREAFRTRRAEFA--GW 59
Query: 81 DYVLI 85
D +L
Sbjct: 60 DILLR 64
>gi|261878998|ref|ZP_06005425.1| ribonuclease P protein component [Prevotella bergensis DSM 17361]
gi|270334383|gb|EFA45169.1| ribonuclease P protein component [Prevotella bergensis DSM 17361]
Length = 143
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 50/132 (37%), Gaps = 18/132 (13%)
Query: 1 MSNICILKKRRQFALVKKGELRKG-PFFSLEVL---------------NNNNSNLLPRVG 44
+ + ++ + +G + F L + +N+ ++
Sbjct: 8 LHKEERIYSKKTIDALFQGGRSRSMSAFPLRAVYMPLQVGQETAGSSTSNHAERSKAKMM 67
Query: 45 FTVTKKQ-GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFV 103
+V+K+ AV+RNR++R+++EA R V +H I + L +++ + +
Sbjct: 68 VSVSKRCFKHAVDRNRVKRQVREAYRKHKAIVAEHEIAIAFIWLDNHL-RSSEKVESSVI 126
Query: 104 ERVRRNKRSYYS 115
++R
Sbjct: 127 RLLQRIDECLQK 138
>gi|221069749|ref|ZP_03545854.1| hypothetical protein CtesDRAFT_PD5088 [Comamonas testosteroni KF-1]
gi|220714772|gb|EED70140.1| hypothetical protein CtesDRAFT_PD5088 [Comamonas testosteroni KF-1]
Length = 185
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 39/152 (25%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLE----VLNNNNSNLLPRVG-------------- 44
+ LK R QF + P F+L V + PR G
Sbjct: 1 MQRLKTRPQFQATMSAGTIARTPHFALHRMELVAEVADMVANPRTGPGSSDPQALFGIGA 60
Query: 45 ---------FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+ +V R+ ++R++ + +L YV+ + F
Sbjct: 61 VRKQAWMGAMVPKRWARRSVTRHTIKRQIYAVSSEYEDALLCAS--YVVRLRSGFDRKQF 118
Query: 96 ---------KELCNHFVERVRRNKRSYYSGKN 118
+ + R +
Sbjct: 119 VSATSDQLKAAVRKELQQLFATGARRLTQARQ 150
>gi|160901489|ref|YP_001567071.1| hypothetical protein Daci_6058 [Delftia acidovorans SPH-1]
gi|160367073|gb|ABX38686.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 169
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 35/150 (23%), Gaps = 37/150 (24%)
Query: 4 ICILKKRRQFALV-KKGELRKGPFFSLEVLNNNNS------------------------- 37
+ LK R QF G + + F+L L
Sbjct: 1 MQRLKTRPQFQAAMAAGTVSRTAHFALHRLVLTEQGGAMAPPTGPGSQDPQALFGVGAVR 60
Query: 38 NLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF-- 95
+ +V R+ ++R++ +L+ H V+ + F
Sbjct: 61 QDAWLGAMVPKRWARRSVTRHTIKRQIYAVGSEHETLMLQGAH--VVRLRSGFDRRQFVS 118
Query: 96 -------KELCNHFVERVRRNKRSYYSGKN 118
+ + + +
Sbjct: 119 ATSDVLRQAVRAELQQLFAYAAKRLSQPAP 148
>gi|160884934|ref|ZP_02065937.1| hypothetical protein BACOVA_02924 [Bacteroides ovatus ATCC 8483]
gi|260172701|ref|ZP_05759113.1| ribonuclease P [Bacteroides sp. D2]
gi|262405663|ref|ZP_06082213.1| ribonuclease P protein component protein [Bacteroides sp. 2_1_22]
gi|294644397|ref|ZP_06722160.1| ribonuclease P protein component [Bacteroides ovatus SD CC 2a]
gi|294810390|ref|ZP_06769047.1| ribonuclease P protein component [Bacteroides xylanisolvens SD CC
1b]
gi|299145185|ref|ZP_07038253.1| ribonuclease P protein component [Bacteroides sp. 3_1_23]
gi|315920993|ref|ZP_07917233.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109969|gb|EDO11714.1| hypothetical protein BACOVA_02924 [Bacteroides ovatus ATCC 8483]
gi|262356538|gb|EEZ05628.1| ribonuclease P protein component protein [Bacteroides sp. 2_1_22]
gi|292640232|gb|EFF58487.1| ribonuclease P protein component [Bacteroides ovatus SD CC 2a]
gi|294442355|gb|EFG11165.1| ribonuclease P protein component [Bacteroides xylanisolvens SD CC
1b]
gi|298515676|gb|EFI39557.1| ribonuclease P protein component [Bacteroides sp. 3_1_23]
gi|313694868|gb|EFS31703.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 129
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+ + + ++ AV+RNR++R+++EA R +
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSLL 84
>gi|145220574|ref|YP_001131283.1| ribonuclease P [Prosthecochloris vibrioformis DSM 265]
gi|145206738|gb|ABP37781.1| hypothetical protein Cvib_1773 [Chlorobium phaeovibrioides DSM 265]
Length = 159
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 17/118 (14%)
Query: 19 GELRKGPFFSLEVLN----NNNSNLLPRVGFTVTKKQGCAVE-RNRMRRRLKEAVRLCAE 73
G+ KG F L L+ P V F V+KK A RNR++R ++EA RL
Sbjct: 41 GKSLKGNFLRLVYLSHDAVRGGFASPPSVMFAVSKKTLPAAVMRNRVKRLMREAYRLEKP 100
Query: 74 GVLK-----------HGHDYVLI-AKRDALFIPFKELCNHFVERVRRNKRSYYSGKNF 119
+L V + +R + + +R S +
Sbjct: 101 MLLSRLEDTGDRKAGEALSIVFLYTRRGSHIPSLPDFRREMNSALREMLLKAVSDRER 158
>gi|312131874|ref|YP_003999214.1| ribonuclease p protein component [Leadbetterella byssophila DSM
17132]
gi|311908420|gb|ADQ18861.1| ribonuclease P protein component [Leadbetterella byssophila DSM
17132]
Length = 119
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTK-KQGCAVERNRMRRRLKEAVR 69
+ +++ P++ TV+K AV+RN ++R+++EA R
Sbjct: 36 VIYRESSSEEPQYPQILITVSKRNFKKAVDRNHIKRQIREAYR 78
>gi|124026364|ref|YP_001015480.1| ribonuclease P protein component [Prochlorococcus marinus str.
NATL1A]
gi|254808076|sp|A2C405|RNPA_PROM1 RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|123961432|gb|ABM76215.1| Bacterial ribonuclease P protein component [Prochlorococcus marinus
str. NATL1A]
Length = 128
Score = 34.3 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 13/122 (10%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVL----------NNNNSNLLPRVGFTVT- 48
+ LK R F + K G L V + + + +++
Sbjct: 3 LPKHMRLKGHRCFDFIYKEGSRFYSSSMVLRVTDANKKPQVKGKQSKTRPSIKCAISISN 62
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIA-KRDALFIPFKELCNHFVERVR 107
K +V RN++RR + L + + I+ K ++ + L + +
Sbjct: 63 KVSKKSVTRNKLRRLFHHHLSLRLSNMSCDKEIWAFISLKPSSMKNSYSTLLKECDKLLT 122
Query: 108 RN 109
+
Sbjct: 123 KA 124
>gi|121611911|ref|YP_999718.1| hypothetical protein Veis_5014 [Verminephrobacter eiseniae EF01-2]
gi|121556551|gb|ABM60700.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
Length = 127
Score = 34.3 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 23/129 (17%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLEVLNNNNSNLLPR----------VGFTVTKK-Q 51
+ LK R QF G + F+L L + R +G + K+
Sbjct: 1 MQRLKTRAQFQAAMTGGTVARTAHFALHRLALDMPTPPARPALFAVPGVWLGVVLPKRWA 60
Query: 52 GCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF---------KELCNHF 102
AV RN ++R++ L + + H V+ + F + +
Sbjct: 61 RRAVTRNAIKRQIYTVGALFETRLAQAAH--VVRLRSAFDRQQFVSARSEPLRQAVRAEL 118
Query: 103 VERVRRNKR 111
V+ + R
Sbjct: 119 VQLFGQAAR 127
>gi|298483300|ref|ZP_07001479.1| ribonuclease P protein component [Bacteroides sp. D22]
gi|298270617|gb|EFI12199.1| ribonuclease P protein component [Bacteroides sp. D22]
Length = 129
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+ + + ++ AV+RNR++R+++EA R +
Sbjct: 37 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSLL 84
>gi|294674939|ref|YP_003575555.1| ribonuclease P protein component [Prevotella ruminicola 23]
gi|294471947|gb|ADE81336.1| ribonuclease P protein component [Prevotella ruminicola 23]
Length = 130
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGV-LKHGHD-YVLIAKRDALFIPFKEL--CNH 101
K+ AV+RNR++R+++EA R + K D +LIA F L
Sbjct: 58 VPKKRFKHAVDRNRVKRQVREAYRKNKSLLEGKVNEDEMLLIAIIWLTDKHFPTLDVEKK 117
Query: 102 FVERVRRNKRSY 113
+ +++ +
Sbjct: 118 MISLMKQIAKDK 129
>gi|294341968|emb|CAZ90397.1| putative Ribosomal protein S5 domain 2-like [Thiomonas sp. 3As]
Length = 153
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNS----------NLLPRVGFTVTKKQGC-AV 55
L++ FA + + F L +G + KK AV
Sbjct: 17 LRQPEAFAAMFAARYAQQAEFRLHYRAAPTEWVPDAAPASAQPRCWLGLVIPKKFCKPAV 76
Query: 56 ERNRMRRRLKEAVRLCA 72
RN ++R +++A+R
Sbjct: 77 RRNLIKRVMRQALRELR 93
>gi|325299416|ref|YP_004259333.1| Ribonuclease P protein component [Bacteroides salanitronis DSM
18170]
gi|324318969|gb|ADY36860.1| Ribonuclease P protein component [Bacteroides salanitronis DSM
18170]
Length = 131
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
K+ AV+RNR++R+++EA R +
Sbjct: 58 VSKKRFKRAVKRNRVKRQIREAYRKNKSLL 87
>gi|296137609|ref|YP_003644851.1| hypothetical protein Tint_3197 [Thiomonas intermedia K12]
gi|295797731|gb|ADG32521.1| hypothetical protein Tint_3197 [Thiomonas intermedia K12]
Length = 153
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 7 LKKRRQFALVKKGELRKGPFFSLEVLNNNNS----------NLLPRVGFTVTKKQGC-AV 55
L++ FA + + F L +G + KK AV
Sbjct: 17 LRQPEAFAAMFAARYAQQAEFRLHYRAAPTEWVPDASPASAQPRCWLGLVIPKKFCKPAV 76
Query: 56 ERNRMRRRLKEAVRLCA 72
RN ++R +++A+R
Sbjct: 77 RRNLIKRVMRQALRELR 93
>gi|264680934|ref|YP_003280844.1| hypothetical protein CtCNB1_4802 [Comamonas testosteroni CNB-2]
gi|262211450|gb|ACY35548.1| hypothetical protein CtCNB1_4802 [Comamonas testosteroni CNB-2]
Length = 185
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 39/155 (25%), Gaps = 39/155 (25%)
Query: 4 ICILKKRRQFALVKKGELR-KGPFFSLE----VLNNNNSNLLPRVG-------------- 44
+ LK R QF + P F+L V + PR G
Sbjct: 1 MQRLKTRPQFQATMSAGTIARTPHFALHRMELVAEVPDMVANPRTGPGSNDPQALFGIGA 60
Query: 45 ---------FTVTKKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
+ +V R+ ++R++ + +L YV+ + F
Sbjct: 61 VRKQAWLGAMVPKRWARRSVTRHTIKRQIYAVSSDYEDALLCAS--YVVRLRSGFDRKQF 118
Query: 96 ---------KELCNHFVERVRRNKRSYYSGKNFSR 121
+ + R + +
Sbjct: 119 VSATSDQLKAAVRKELQQLFATGARRLTQARQTAE 153
>gi|33863636|ref|NP_895196.1| ribonuclease P protein component [Prochlorococcus marinus str. MIT
9313]
gi|48474358|sp|Q7V612|RNPA_PROMM RecName: Full=Ribonuclease P protein component; Short=RNase P
protein; Short=RNaseP protein; AltName: Full=Protein C5
gi|33635219|emb|CAE21544.1| bacterial ribonuclease P protein component of ribozyme
[Prochlorococcus marinus str. MIT 9313]
Length = 128
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 1 MSNICILKKRRQFALVKK-GELRKGPFFSLEVLN----------NNNSNLLPRVGFTVT- 48
+ L+ R F ++K G G L V+ ++++ R ++
Sbjct: 3 LPASMRLRGSRCFEHLQKWGYRFYGTSMVLRVIEANPQLLKAPHRHHNSTACRCAVVISS 62
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFI 93
K AV RNR+RR L + +R E +H + +VLI+ +
Sbjct: 63 KVSKRAVIRNRLRRLLHDHLRSRLEVAPEHCNHWVLISLKPVASA 107
>gi|288928867|ref|ZP_06422713.1| ribonuclease P protein component [Prevotella sp. oral taxon 317
str. F0108]
gi|288329851|gb|EFC68436.1| ribonuclease P protein component [Prevotella sp. oral taxon 317
str. F0108]
Length = 135
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGV---LKHGHDYVLIAKR-DALFIPFKELCNH 101
++ AV+RNR++R+++EA R + L G L DA E+ +
Sbjct: 64 VPKRRFKHAVDRNRVKRQVREAYRKNKHLLYDKLPTGRRITLGFLWLDAKHHSSAEVEDK 123
Query: 102 FVERVRRN 109
+RR
Sbjct: 124 VQNLLRRI 131
>gi|282859936|ref|ZP_06269024.1| ribonuclease P protein component [Prevotella bivia JCVIHMP010]
gi|282587339|gb|EFB92556.1| ribonuclease P protein component [Prevotella bivia JCVIHMP010]
Length = 165
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 10 RRQFALVKKGELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAV 68
R F + + + +LE N ++ +V KK AV RNR++R+++EA
Sbjct: 54 RAVFRFIARENVETSKDTTLETEEPLAFNTQTQLLISVPKKCFKRAVRRNRVKRQVREAF 113
Query: 69 RLCAEGV 75
R +
Sbjct: 114 RKNRTLL 120
>gi|237716895|ref|ZP_04547376.1| ribonuclease P [Bacteroides sp. D1]
gi|229442878|gb|EEO48669.1| ribonuclease P [Bacteroides sp. D1]
Length = 113
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+ + + ++ AV+RNR++R+++EA R +
Sbjct: 21 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSLL 68
>gi|309810421|ref|ZP_07704252.1| ribonuclease, Rne/Rng family [Dermacoccus sp. Ellin185]
gi|308435618|gb|EFP59419.1| ribonuclease, Rne/Rng family [Dermacoccus sp. Ellin185]
Length = 784
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 10/69 (14%)
Query: 55 VERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKRSYY 114
ER R++R LKE V D +I + A +EL ++ +R
Sbjct: 334 TERARLKRILKEVV----------PADAGVIVRTAAEGASEEELRADVERLMKMWERIQA 383
Query: 115 SGKNFSRKS 123
+ + S
Sbjct: 384 KAETANAPS 392
>gi|317470984|ref|ZP_07930362.1| phosphoesterase [Anaerostipes sp. 3_2_56FAA]
gi|316901539|gb|EFV23475.1| phosphoesterase [Anaerostipes sp. 3_2_56FAA]
Length = 367
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 9/99 (9%)
Query: 8 KKRRQFALVKKG-ELRKGPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKE 66
KR + K K + S V N++SN + RN K
Sbjct: 183 TKREEMERAAKALGYMKSTYGSFYVYGNHDSNQYRE-----KPEYTSGYLRNT---LEKA 234
Query: 67 AVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVER 105
VR+ + V K G D +I ++DA K L +
Sbjct: 235 GVRVLEDEVFKTGKDICIIGRKDAGDRDRKSLKEIMKDA 273
>gi|282879068|ref|ZP_06287828.1| ribonuclease P protein component [Prevotella buccalis ATCC 35310]
gi|281298802|gb|EFA91211.1| ribonuclease P protein component [Prevotella buccalis ATCC 35310]
Length = 103
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCA 72
+ AV+RNR++R+++EA R
Sbjct: 30 VSKRHFKRAVKRNRVKRQVREAYRQNK 56
>gi|302346028|ref|YP_003814381.1| ribonuclease P protein component [Prevotella melaninogenica ATCC
25845]
gi|302149402|gb|ADK95664.1| ribonuclease P protein component [Prevotella melaninogenica ATCC
25845]
Length = 141
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAE 73
K AV+RNR++R+++EA R
Sbjct: 68 VPKKHFKRAVKRNRVKRQVREAYRKHKS 95
>gi|326563095|gb|EGE13368.1| ribonuclease P protein component [Moraxella catarrhalis 12P80B1]
Length = 61
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 57 RNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPFKELCNHFVERVRRNKR 111
RNR++R +E R + D V+I K ++ E + +
Sbjct: 3 RNRLKRLCRENFRHRQASWVA--IDVVVIVKAGYPRE--FDIATEVTELFNKINK 53
>gi|237720660|ref|ZP_04551141.1| ribonuclease P [Bacteroides sp. 2_2_4]
gi|229450411|gb|EEO56202.1| ribonuclease P [Bacteroides sp. 2_2_4]
Length = 109
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 28 SLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGV 75
+ + + ++ AV+RNR++R+++EA R +
Sbjct: 17 VVYMPVEQGEAPASILISVSKRRFKRAVKRNRVKRQIREAYRKNKSLL 64
>gi|91790729|ref|YP_551681.1| hypothetical protein Bpro_4907 [Polaromonas sp. JS666]
gi|91699954|gb|ABE46783.1| hypothetical protein Bpro_4907 [Polaromonas sp. JS666]
Length = 136
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 21/111 (18%)
Query: 4 ICILKKRRQFALVKKGE-LRKGPFFSLEVLNNNNSNLLPR-----------------VGF 45
+ L+ R QF V G + + F+L + + R +G
Sbjct: 1 MQRLQTRPQFQAVLAGAIVARTTHFALHRNALDAKPVPARPVEGVDSPALFPVQDQWIGA 60
Query: 46 TVTKKQGC-AVERNRMRRRLKEAVRLCAEGVLKHGHDYVLIAKRDALFIPF 95
V K+ AV RN ++R++ + YV+ +RD F
Sbjct: 61 MVPKRWAKRAVTRNAIKRQIYTVSAEFLHQYPQAA--YVVRLRRDFSRAEF 109
>gi|304382217|ref|ZP_07364724.1| ribonuclease P protein component [Prevotella marshii DSM 16973]
gi|304336574|gb|EFM02803.1| ribonuclease P protein component [Prevotella marshii DSM 16973]
Length = 127
Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 27 FSLEVLNNNNSNLLPRVGFTVTKKQGC-AVERNRMRRRLKEAVRLCAEGVL 76
+ + ++ +V K+ AV+RNR++R+++EA R + +
Sbjct: 38 LVFLSIPRDEGEPRAKILVSVPKRYFKQAVKRNRVKRQIREAYRKHKQLIP 88
>gi|303236118|ref|ZP_07322720.1| ribonuclease P protein component [Prevotella disiens FB035-09AN]
gi|302483700|gb|EFL46693.1| ribonuclease P protein component [Prevotella disiens FB035-09AN]
Length = 163
Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 33 NNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVRLCAEGVL 76
+ + + + K AV+RNR +R+++EA R +L
Sbjct: 67 KTDENPQIKILISVPKKHFKRAVKRNRAKRQIREAYRKNKYLLL 110
>gi|326432213|gb|EGD77783.1| hypothetical protein PTSG_08873 [Salpingoeca sp. ATCC 50818]
Length = 1486
Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 24 GPFFSLEVLNNNNSNLLPRVGFTVTKKQGCAVERNRMRRRLKEAVR------LCAEGVLK 77
+F+ V V K ++ + R +R+++E +R +
Sbjct: 1397 NDWFTFHVCKRGVIRAHLSVDPDTANKVNLSIHKRRGKRKIREKLRGGQVEAEIEAQAGR 1456
Query: 78 HGHDYVLI 85
G+ YVL+
Sbjct: 1457 AGYYYVLV 1464
>gi|255534241|ref|YP_003094612.1| Ribonuclease P protein component [Flavobacteriaceae bacterium
3519-10]
gi|255340437|gb|ACU06550.1| Ribonuclease P protein component [Flavobacteriaceae bacterium
3519-10]
Length = 72
Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 46 TVTKKQGCAVERNRMRRRLKEAVRLCAEGVLK----HGHDYVLIAKRDALFIPFKELCNH 101
K AV+RNR++R L+E R H + ++ F+ L +
Sbjct: 5 VSKKYFKKAVDRNRIKRLLREMYRHNKAEFSARFGEHSLSMIFWVSKEMPP-DFETLQQN 63
Query: 102 FVER 105
F+
Sbjct: 64 FLTL 67
>gi|189501468|ref|YP_001960938.1| ribonuclease P [Chlorobium phaeobacteroides BS1]
gi|189496909|gb|ACE05457.1| ribonuclease P protein component, putative [Chlorobium
phaeobacteroides BS1]
Length = 118
Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 17 KKGELRKGPFFSLEV----LNNNNSNLLPRVGFTVTKKQ-GCAVERNRMRRRLKEAVR 69
K + + L ++ LP+V F V K+ AV+RNR++R ++EA R
Sbjct: 4 SKARSVRSGNIKVLFAPLELEQSSKRSLPKVLFIVGKRIVPDAVDRNRIKRLMREAYR 61
>gi|325104484|ref|YP_004274138.1| ribonuclease P protein component [Pedobacter saltans DSM 12145]
gi|324973332|gb|ADY52316.1| ribonuclease P protein component [Pedobacter saltans DSM 12145]
Length = 132
Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 48 TKKQGCAVERNRMRRRLKEAVRLCAEGVL---KHGHD-YVLIAKRDALF--IPFKELCNH 101
K+ +V+RN ++RR+KEA R + +L G+D Y+L+A + +K +
Sbjct: 59 KKRFKHSVDRNLIKRRIKEAYRNNKQDLLYSFLTGNDKYILLAINYVGKEILDYKIMEEK 118
Query: 102 FVERVRRNKRSY 113
++ ++
Sbjct: 119 MRGVLKMLQKQI 130
>gi|78212129|ref|YP_380908.1| ribonuclease P protein component of ribozyme [Synechococcus sp.
CC9605]
gi|78196588|gb|ABB34353.1| ribonuclease P protein component of ribozyme [Synechococcus sp.
CC9605]
Length = 128
Score = 33.6 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 1 MSNICILKKRRQFALVKKGELRKGPFFSLEVLNNNNSN-----------LLPRVGFTVT- 48
+ L+ R F + + R+ + + +SN R ++
Sbjct: 3 LPASMRLRGHRCFNRLHRSSKRQHGTLMVLRVAAGDSNLLRRELRGIQERTCRCALVISN 62
Query: 49 KKQGCAVERNRMRRRLKEAVRLCAEGV-LKHGHDYVLIAKRDALFIPFKELCNHFVERVR 107
K +V+RNR+RR L + +R E G ++ + +A +L +R
Sbjct: 63 KVSKRSVKRNRLRRLLHDHLRRRFEQRNDLAGRWLLISLRPEAAEAEPTQLLEECDSLLR 122
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.165 0.457
Lambda K H
0.267 0.0507 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,375,698,342
Number of Sequences: 14124377
Number of extensions: 56313148
Number of successful extensions: 341000
Number of sequences better than 10.0: 1995
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 335657
Number of HSP's gapped (non-prelim): 2191
length of query: 123
length of database: 4,842,793,630
effective HSP length: 89
effective length of query: 34
effective length of database: 3,585,724,077
effective search space: 121914618618
effective search space used: 121914618618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.7 bits)
S2: 76 (33.6 bits)