HHsearch alignment for GI: 254780483 and conserved domain: PRK00247
>PRK00247 putative inner membrane protein translocase component YidC; Validated.
Probab=100.00 E-value=0 Score=357.62 Aligned_cols=197 Identities=23% Similarity=0.388 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 1639999999999998889999999999988877888999997314511----567899999998504878678899999
Q gi|254780483|r 359 NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSP----PQVLQKAMIQLYKTHNINPLAGCWPIL 434 (581)
Q Consensus 359 NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ekyk~d~----~~~~~~e~m~ly~~~~vnP~~GClP~l 434 (581)
T Consensus 31 aW~lSIi~Lti~VR~il~Pl~~kq~kS~r~Mq~lqPemk~LqeKYk~~~d~~s~~emqqe~m~LyKe~gvNPlaGCLP~L 110 (422)
T PRK00247 31 AWFFSLFGLVITVRAIIAPFTWQMYKSGRTAAHIRPKRAALREEYKGRYDEASIRELQKRQKDLNKEYGINPLAGCVPGL 110 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 99999999999999999977999999999999829589999998568846689999999999999981999632222378
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCCCCCHHHHHHHHHCCCC-------------CCHHH--HHH
Q ss_conf 9999999999999876986288---------75341000033572566676410222-------------20278--999
Q gi|254780483|r 435 LQIPVFFAIYKVISISLEMRHA---------PFWGWIKDLAAADPTNIFTLFGILPF-------------YLPGF--MHV 490 (581)
Q Consensus 435 ~q~p~~~a~~~~~~~~ielr~~---------~f~~Wi~dls~~d~~~~~~~~~~~p~-------------~~~~~--~~~ 490 (581)
T Consensus 111 iQiPvFigLY~VLl~~ar~~~G~~~~~~~~iG~-ls~~dV~SF~~A~l---FG-aPLsa~~sm~~e~la~lgtt~~~V~~ 185 (422)
T PRK00247 111 IQIPVVLGLYQVLLRMARPEGGLENPVFQSIGF-LTPEEVESFLAGRV---FN-VPLPAYVSMPTEQLAYLGTTQAEVLS 185 (422)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCHHHHHHHHHCHH---CC-CCCHHHHCCCHHHHHHCCCCCHHHHH
T ss_conf 862699999999998525567878888778776-89999999984713---38-72188745878888650787225789
Q ss_pred HHHHHHHHHHHHHHHHC--C----CCC-------CCHHHHH--HH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999752--8----877-------4689999--99-9968999999987--8799999999999999999
Q gi|254780483|r 491 GIWPIIMSLSMFIQMKM--S----PPP-------ADKGQAM--IL-NWMPVVFVFALSS--FPAGLIIYWSWSNVISIVQ 552 (581)
Q Consensus 491 ~ilp~l~~~~m~~~~k~--~----p~~-------~d~~q~~--~~-~~mp~~~~~~~~~--~~~gl~~y~~~~~~~~~~q 552 (581)
T Consensus 186 vvlplli~As~fTt~n~~~S~~R~~~t~d~~s~~~~~m~k~m~~m~~l~Pvfpl~~gv~GpFPVaVLlYW~tnNlWTmGQ 265 (422)
T PRK00247 186 FVLPLFITAAVFTAINMAMSTYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLSLGLTGPFPTAIALYWVANNLWTLLQ 265 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHH
T ss_conf 99999999999999999999986422332121221468999999999999999999964886336324645203888866
Q ss_pred HHHHHHHC
Q ss_conf 99998747
Q gi|254780483|r 553 QAVIMKMH 560 (581)
Q Consensus 553 q~~i~~~~ 560 (581)
T Consensus 266 Q~~m~~i~ 273 (422)
T PRK00247 266 TIIMMVIL 273 (422)
T ss_pred HHHEEEEE
T ss_conf 45302555