HHsearch alignment for GI: 254780483 and conserved domain: PRK01315
>PRK01315 putative inner membrane protein translocase component YidC; Provisional.
Probab=100.00 E-value=0 Score=468.38 Aligned_cols=238 Identities=27% Similarity=0.474 Sum_probs=178.4
Q ss_pred CCHHHHHHHHHH----HHHHHHH---HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 110356899999----9998876---320-------16399999999999988899999999999888778889999973
Q gi|254780483|r 337 GWFYFIAKPMFM----LMSYFYN---LVG-------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREK 402 (581)
Q Consensus 337 Gwf~~i~kplf~----~L~~l~~---~i~-------NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ek 402 (581)
T Consensus 6 ~~~~~il~P~~w~v~~il~~~h~~l~~~g~~~~~G~sW~LsIIllTivVR~ll~PL~~KQ~kS~~kMq~lqPem~~IQ~K 85 (325)
T PRK01315 6 DFLGFILWPIKWVIELILVQFHTLLGALGFGPDSGLSWVLSIVGLVIVIRAALIPLFVKQIKAQRRMQEIQPEMKKIQEK 85 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999997899999999999999998825787666399999999999999999988999999999999867999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHH----
Q ss_conf 1451156789999999850487867889999999999999999998769862887534100003357-25666764----
Q gi|254780483|r 403 FKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAAD-PTNIFTLF---- 477 (581)
Q Consensus 403 yk~d~~~~~~~e~m~ly~~~~vnP~~GClP~l~q~p~~~a~~~~~~~~ielr~~~f~~Wi~dls~~d-~~~~~~~~---- 477 (581)
T Consensus 86 Yk~d~-qk~qqEmmkLYke~gvNPlaGCLPlLiQmPIf~~Ly~vL~~~~~-~~~~~g~~~~~l~~~~~~a~~fg~pl~~~ 163 (325)
T PRK01315 86 YKGDR-ERMSQEMMKLYKETGTNPLSSCLPILLQMPIFFALYQVLNSAQA-RGDGIGPLNGPLLESFRSAHIFGAPLAAS 163 (325)
T ss_pred CCCCH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHCCCCCCCCCCCHH
T ss_conf 26989-99999999999983999406779999999999999999998776-05763323266787621263058774000
Q ss_pred -----HCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-C----CC-C-CCHH--HHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----102222027899999999999999999752-8----87-7-4689--99999-9968999999987879999999
Q gi|254780483|r 478 -----GILPFYLPGFMHVGIWPIIMSLSMFIQMKM-S----PP-P-ADKG--QAMIL-NWMPVVFVFALSSFPAGLIIYW 542 (581)
Q Consensus 478 -----~~~p~~~~~~~~~~ilp~l~~~~m~~~~k~-~----p~-~-~d~~--q~~~~-~~mp~~~~~~~~~~~~gl~~y~ 542 (581)
T Consensus 164 f~~~~~~~~~~~~~~iv~~il~vlm~~s~f~~q~qlm~k~~~~~~~~~p~~~qqk~Mm~~mPlm~~~~~~~fPaGl~lYW 243 (325)
T PRK01315 164 FSDANGAVTALTDVMVVAAVMVVLMSASQFFTQLQLMTKNMPPETKATPMFQQQKMLLYLLPVMFAVSGIAFPVGVLFYW 243 (325)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 04543335530158899999999999999999999703479986547869999999999999999999977899999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHH-HHHHHC
Q ss_conf 9999999999999987479983479898-888520
Q gi|254780483|r 543 SWSNVISIVQQAVIMKMHGAEIGLIDRL-RSTFSK 576 (581)
Q Consensus 543 ~~~~~~~~~qq~~i~~~~~~~~~~~~~~-~~~~~~ 576 (581)
T Consensus 244 ~tsNl~ti~QQ~~v~r~~p~pgs~a~~~~~~r~~~ 278 (325)
T PRK01315 244 LTSNVWTMGQQFYVIRNNPTPGSKAAEARRERLAR 278 (325)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999999970899997578999878876