HHsearch alignment for GI: 254780483 and conserved domain: PRK03449
>PRK03449 putative inner membrane protein translocase component YidC; Provisional.
Probab=100.00 E-value=0 Score=467.03 Aligned_cols=230 Identities=23% Similarity=0.399 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 03568999999998876320---------163999999999999888999999999998887788899999731451156
Q gi|254780483|r 339 FYFIAKPMFMLMSYFYNLVG---------NFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQ 409 (581)
Q Consensus 339 f~~i~kplf~~L~~l~~~i~---------NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ekyk~d~~~ 409 (581)
T Consensus 2 ~~~~~~~~~~vl~~~h~l~~~~~~~~~~~swglsIIllTiiVR~ll~PL~~kq~kS~~kMq~lqPei~~Iq~KYk~D~-q 80 (304)
T PRK03449 2 LDFIYYPVSAILWFWHKLFAFVLGPDNGFAWALSVMFLVFTLRALLYKPFVRQIRTTRKMQELQPQIKALQKKYGNDR-Q 80 (304)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCH-H
T ss_conf 005999999999999999997728866619999999999999999999899999999999985878999998865869-9
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HH-CCCC-CCCCCCCCCCCCHHHHH
Q ss_conf 789999999850487867889999999999999999998769-------------86-2887-53410000335725666
Q gi|254780483|r 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-------------EM-RHAP-FWGWIKDLAAADPTNIF 474 (581)
Q Consensus 410 ~~~~e~m~ly~~~~vnP~~GClP~l~q~p~~~a~~~~~~~~i-------------el-r~~~-f~~Wi~dls~~d~~~~~ 474 (581)
T Consensus 81 k~qqE~mkLYke~gvNPl~GCLP~LiQmPIf~~LY~vlr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfl~~~~f 160 (304)
T PRK03449 81 RMALEMQKLQKEHGFNPILGCLPMLAQIPVFLGLFHVLRSFNRTGTGFGQLGLSVEENRNTPNYVFSAEDVQSFLDANLF 160 (304)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999859993156699999999999999999850123332132111025430474100565667666668772
Q ss_pred H-------------HHHCCCCCCHHHHHHH-HHHHHHHHHHHHHHHCCC-----C-CCCHHH---HHHH-HHHHHHHHHH
Q ss_conf 7-------------6410222202789999-999999999999975288-----7-746899---9999-9968999999
Q gi|254780483|r 475 T-------------LFGILPFYLPGFMHVG-IWPIIMSLSMFIQMKMSP-----P-PADKGQ---AMIL-NWMPVVFVFA 530 (581)
Q Consensus 475 ~-------------~~~~~p~~~~~~~~~~-ilp~l~~~~m~~~~k~~p-----~-~~d~~q---~~~~-~~mp~~~~~~ 530 (581)
T Consensus 161 g~pl~~~~~~~~~~~~~~~~~~~~~i~~~~~pl~il~~~~~~~~~~~s~~~~~~~~~~n~q~~~m~k~M~~~mPlm~~~~ 240 (304)
T PRK03449 161 GAPLSAYITMQRSGLDAFTDFSRTAIILVGVPLMIIAGVATHFNARASVARQSAEAAANPQTAMMNKLALWVFPLGVLVG 240 (304)
T ss_pred CCCHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69727653266110012245442006999999999999999999999874358888999769999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 987879999999999999999999998747998347989
Q gi|254780483|r 531 LSSFPAGLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDR 569 (581)
Q Consensus 531 ~~~~~~gl~~y~~~~~~~~~~qq~~i~~~~~~~~~~~~~ 569 (581)
T Consensus 241 ~~~~PaGL~lYWi~sNl~~i~QQ~~i~~~~~~~~~~~~~ 279 (304)
T PRK03449 241 GPFLPLAILLYWFSNNIWTFGQQHYVFGKIDKEEEAKKQ 279 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 996999999999999999999999997138997127999